Add files using upload-large-folder tool
Browse filesThis view is limited to 50 files because it contains too many changes. See raw diff
- experiments/bioagent_bench/runs/scale_1000/comparative-genomics_20260515_135806/orthofinder_output/Results_May15/WorkingDirectory/SpeciesTrees_ids/OG0000002_tree_id.txt.tre +2 -0
- experiments/bioagent_bench/runs/scale_1000/comparative-genomics_20260515_135806/orthofinder_output/Results_May15/WorkingDirectory/SpeciesTrees_ids/OG0000003_tree_id.txt.tre +2 -0
- experiments/bioagent_bench/runs/scale_1000/comparative-genomics_20260515_135806/orthofinder_output/Results_May15/WorkingDirectory/SpeciesTrees_ids/OG0000004_tree_id.txt.tre +2 -0
- experiments/bioagent_bench/runs/scale_1000/comparative-genomics_20260515_135806/orthofinder_output/Results_May15/WorkingDirectory/SpeciesTrees_ids/OG0000010_tree_id.txt.tre +2 -0
- experiments/bioagent_bench/runs/scale_1000/comparative-genomics_20260515_135806/orthofinder_output/Results_May15/WorkingDirectory/SpeciesTrees_ids/OG0000015_tree_id.txt.tre +2 -0
- experiments/bioagent_bench/runs/scale_1000/comparative-genomics_20260515_135806/orthofinder_output/Results_May15/WorkingDirectory/SpeciesTrees_ids/OG0000019_tree_id.txt.tre +2 -0
- experiments/bioagent_bench/runs/scale_1000/comparative-genomics_20260515_135806/orthofinder_output/Results_May15/WorkingDirectory/SpeciesTrees_ids/OG0000020_tree_id.txt.tre +2 -0
- experiments/bioagent_bench/runs/scale_1000/comparative-genomics_20260515_135806/orthofinder_output/Results_May15/WorkingDirectory/SpeciesTrees_ids/OG0000021_tree_id.txt.tre +2 -0
- experiments/bioagent_bench/runs/scale_1000/comparative-genomics_20260515_135806/orthofinder_output/Results_May15/WorkingDirectory/SpeciesTrees_ids/OG0000024_tree_id.txt.tre +2 -0
- experiments/bioagent_bench/runs/scale_1000/comparative-genomics_20260515_135806/orthofinder_output/Results_May15/WorkingDirectory/SpeciesTrees_ids/OG0000025_tree_id.txt.tre +2 -0
- experiments/bioagent_bench/runs/scale_1000/comparative-genomics_20260515_135806/orthofinder_output/Results_May15/WorkingDirectory/SpeciesTrees_ids/OG0000026_tree_id.txt.tre +2 -0
- experiments/bioagent_bench/runs/scale_1000/comparative-genomics_20260515_135806/orthofinder_output/Results_May15/WorkingDirectory/SpeciesTrees_ids/OG0000031_tree_id.txt.tre +2 -0
- experiments/bioagent_bench/runs/scale_1000/comparative-genomics_20260515_135806/orthofinder_output/Results_May15/WorkingDirectory/SpeciesTrees_ids/OG0000034_tree_id.txt.tre +2 -0
- experiments/bioagent_bench/runs/scale_1000/comparative-genomics_20260515_135806/orthofinder_output/Results_May15/WorkingDirectory/SpeciesTrees_ids/OG0000035_tree_id.txt.tre +2 -0
- experiments/bioagent_bench/runs/scale_1000/comparative-genomics_20260515_135806/orthofinder_output/Results_May15/WorkingDirectory/SpeciesTrees_ids/OG0000036_tree_id.txt.tre +2 -0
- experiments/bioagent_bench/runs/scale_1000/comparative-genomics_20260515_135806/orthofinder_output/Results_May15/WorkingDirectory/SpeciesTrees_ids/OG0000038_tree_id.txt.tre +2 -0
- experiments/bioagent_bench/runs/scale_1000/comparative-genomics_20260515_135806/orthofinder_output/Results_May15/WorkingDirectory/SpeciesTrees_ids/OG0000039_tree_id.txt.tre +2 -0
- experiments/bioagent_bench/runs/scale_1000/comparative-genomics_20260515_135806/orthofinder_output/Results_May15/WorkingDirectory/SpeciesTrees_ids/OG0000048_tree_id.txt.tre +2 -0
- experiments/bioagent_bench/runs/scale_1000/comparative-genomics_20260515_135806/orthofinder_output/Results_May15/WorkingDirectory/SpeciesTrees_ids/OG0000050_tree_id.txt.tre +2 -0
- experiments/bioagent_bench/runs/scale_1000/comparative-genomics_20260515_135806/orthofinder_output/Results_May15/WorkingDirectory/SpeciesTrees_ids/OG0000051_tree_id.txt.tre +2 -0
- experiments/bioagent_bench/runs/scale_1000/comparative-genomics_20260515_135806/orthofinder_output/Results_May15/WorkingDirectory/SpeciesTrees_ids/OG0000056_tree_id.txt.tre +2 -0
- experiments/bioagent_bench/runs/scale_1000/comparative-genomics_20260515_135806/orthofinder_output/Results_May15/WorkingDirectory/SpeciesTrees_ids/OG0000058_tree_id.txt.tre +2 -0
- experiments/bioagent_bench/runs/scale_1000/comparative-genomics_20260515_135806/orthofinder_output/Results_May15/WorkingDirectory/SpeciesTrees_ids/OG0000059_tree_id.txt.tre +2 -0
- experiments/bioagent_bench/runs/scale_1000/comparative-genomics_20260515_135806/orthofinder_output/Results_May15/WorkingDirectory/SpeciesTrees_ids/OG0000060_tree_id.txt.tre +2 -0
- experiments/bioagent_bench/runs/scale_1000/comparative-genomics_20260515_135806/orthofinder_output/Results_May15/WorkingDirectory/SpeciesTrees_ids/OG0000062_tree_id.txt.tre +2 -0
- experiments/bioagent_bench/runs/scale_1000/comparative-genomics_20260515_135806/orthofinder_output/Results_May15/WorkingDirectory/SpeciesTrees_ids/OG0000063_tree_id.txt.tre +2 -0
- experiments/bioagent_bench/runs/scale_1000/comparative-genomics_20260515_135806/orthofinder_output/Results_May15/WorkingDirectory/SpeciesTrees_ids/OG0000066_tree_id.txt.tre +2 -0
- experiments/bioagent_bench/runs/scale_1000/comparative-genomics_20260515_135806/orthofinder_output/Results_May15/WorkingDirectory/SpeciesTrees_ids/OG0000069_tree_id.txt.tre +2 -0
- experiments/bioagent_bench/runs/scale_1000/comparative-genomics_20260515_135806/orthofinder_output/Results_May15/WorkingDirectory/SpeciesTrees_ids/OG0000070_tree_id.txt.tre +2 -0
- experiments/bioagent_bench/runs/scale_1000/comparative-genomics_20260515_135806/orthofinder_output/Results_May15/WorkingDirectory/SpeciesTrees_ids/OG0000071_tree_id.txt.tre +2 -0
- experiments/bioagent_bench/runs/scale_1000/comparative-genomics_20260515_135806/orthofinder_output/Results_May15/WorkingDirectory/SpeciesTrees_ids/OG0000072_tree_id.txt.tre +2 -0
- experiments/bioagent_bench/runs/scale_1000/comparative-genomics_20260515_135806/orthofinder_output/Results_May15/WorkingDirectory/SpeciesTrees_ids/OG0000073_tree_id.txt.tre +2 -0
- experiments/bioagent_bench/runs/scale_1000/comparative-genomics_20260515_135806/orthofinder_output/Results_May15/WorkingDirectory/SpeciesTrees_ids/OG0000074_tree_id.txt.tre +2 -0
- experiments/bioagent_bench/runs/scale_1000/comparative-genomics_20260515_135806/orthofinder_output/Results_May15/WorkingDirectory/SpeciesTrees_ids/OG0000075_tree_id.txt.tre +2 -0
- experiments/bioagent_bench/runs/scale_1000/comparative-genomics_20260515_135806/orthofinder_output/Results_May15/WorkingDirectory/SpeciesTrees_ids/OG0000077_tree_id.txt.tre +2 -0
- experiments/bioagent_bench/runs/scale_1000/comparative-genomics_20260515_135806/orthofinder_output/Results_May15/WorkingDirectory/SpeciesTrees_ids/OG0000079_tree_id.txt.tre +2 -0
- experiments/bioagent_bench/runs/scale_1000/comparative-genomics_20260515_135806/orthofinder_output/Results_May15/WorkingDirectory/SpeciesTrees_ids/OG0000082_tree_id.txt.tre +2 -0
- experiments/bioagent_bench/runs/scale_1000/comparative-genomics_20260515_135806/orthofinder_output/Results_May15/WorkingDirectory/SpeciesTrees_ids/OG0000083_tree_id.txt.tre +2 -0
- experiments/bioagent_bench/runs/scale_1000/comparative-genomics_20260515_135806/orthofinder_output/Results_May15/WorkingDirectory/SpeciesTrees_ids/OG0000085_tree_id.txt.tre +2 -0
- experiments/bioagent_bench/runs/scale_1000/comparative-genomics_20260515_135806/orthofinder_output/Results_May15/WorkingDirectory/SpeciesTrees_ids/OG0000086_tree_id.txt.tre +2 -0
- experiments/bioagent_bench/runs/scale_1000/comparative-genomics_20260515_135806/orthofinder_output/Results_May15/WorkingDirectory/SpeciesTrees_ids/OG0000087_tree_id.txt.tre +2 -0
- experiments/bioagent_bench/runs/scale_1000/comparative-genomics_20260515_135806/orthofinder_output/Results_May15/WorkingDirectory/SpeciesTrees_ids/OG0000088_tree_id.txt.tre +2 -0
- experiments/bioagent_bench/runs/scale_1000/comparative-genomics_20260515_135806/orthofinder_output/Results_May15/WorkingDirectory/SpeciesTrees_ids/OG0000090_tree_id.txt.tre +2 -0
- experiments/bioagent_bench/runs/scale_1000/comparative-genomics_20260515_135806/orthofinder_output/Results_May15/WorkingDirectory/SpeciesTrees_ids/OG0000091_tree_id.txt.tre +2 -0
- experiments/bioagent_bench/runs/scale_1000/comparative-genomics_20260515_135806/orthofinder_output/Results_May15/WorkingDirectory/SpeciesTrees_ids/OG0000093_tree_id.txt.tre +2 -0
- experiments/bioagent_bench/runs/scale_1000/comparative-genomics_20260515_135806/orthofinder_output/Results_May15/WorkingDirectory/SpeciesTrees_ids/OG0000094_tree_id.txt.tre +2 -0
- experiments/bioagent_bench/runs/scale_1000/comparative-genomics_20260515_135806/orthofinder_output/Results_May15/WorkingDirectory/SpeciesTrees_ids/OG0000096_tree_id.txt.tre +2 -0
- experiments/bioagent_bench/runs/scale_1000/comparative-genomics_20260515_135806/orthofinder_output/Results_May15/WorkingDirectory/SpeciesTrees_ids/OG0000098_tree_id.txt.tre +2 -0
- experiments/bioagent_bench/runs/scale_1000/comparative-genomics_20260515_135806/orthofinder_output/Results_May15/WorkingDirectory/SpeciesTrees_ids/OG0000099_tree_id.txt.tre +2 -0
- experiments/bioagent_bench/runs/scale_1000/comparative-genomics_20260515_135806/orthofinder_output/Results_May15/WorkingDirectory/SpeciesTrees_ids/OG0000101_tree_id.txt.tre +2 -0
experiments/bioagent_bench/runs/scale_1000/comparative-genomics_20260515_135806/orthofinder_output/Results_May15/WorkingDirectory/SpeciesTrees_ids/OG0000002_tree_id.txt.tre
ADDED
|
@@ -0,0 +1,2 @@
|
|
|
|
|
|
|
|
|
|
| 1 |
+
(0:0.00147650,((3:-0.00207533,1:0.00208833):0.00430808,2:-0.00223175):0.00787925,4:0.00040650);
|
| 2 |
+
|
experiments/bioagent_bench/runs/scale_1000/comparative-genomics_20260515_135806/orthofinder_output/Results_May15/WorkingDirectory/SpeciesTrees_ids/OG0000003_tree_id.txt.tre
ADDED
|
@@ -0,0 +1,2 @@
|
|
|
|
|
|
|
|
|
|
| 1 |
+
((2:0.01245700,1:0.01162500):0.00527750,(3:-0.00026500,0:0.00026600):0.00236800,4:-0.00236750);
|
| 2 |
+
|
experiments/bioagent_bench/runs/scale_1000/comparative-genomics_20260515_135806/orthofinder_output/Results_May15/WorkingDirectory/SpeciesTrees_ids/OG0000004_tree_id.txt.tre
ADDED
|
@@ -0,0 +1,2 @@
|
|
|
|
|
|
|
|
|
|
| 1 |
+
((2:1.01784733,0:-0.00005233):0.00380208,(3:0.00000750,1:0.00000250):0.00018300,4:-0.00017675);
|
| 2 |
+
|
experiments/bioagent_bench/runs/scale_1000/comparative-genomics_20260515_135806/orthofinder_output/Results_May15/WorkingDirectory/SpeciesTrees_ids/OG0000010_tree_id.txt.tre
ADDED
|
@@ -0,0 +1,2 @@
|
|
|
|
|
|
|
|
|
|
| 1 |
+
(((2:0.33667150,0:0.31586450):1.00052150,1:-0.14494000):0.15132100,3:0.01014100,4:0.00000000);
|
| 2 |
+
|
experiments/bioagent_bench/runs/scale_1000/comparative-genomics_20260515_135806/orthofinder_output/Results_May15/WorkingDirectory/SpeciesTrees_ids/OG0000015_tree_id.txt.tre
ADDED
|
@@ -0,0 +1,2 @@
|
|
|
|
|
|
|
|
|
|
| 1 |
+
((2:0.01361975,0:0.03753125):0.00595050,(3:-0.00070825,1:0.00070925):0.00513800,4:0.00284250);
|
| 2 |
+
|
experiments/bioagent_bench/runs/scale_1000/comparative-genomics_20260515_135806/orthofinder_output/Results_May15/WorkingDirectory/SpeciesTrees_ids/OG0000019_tree_id.txt.tre
ADDED
|
@@ -0,0 +1,2 @@
|
|
|
|
|
|
|
|
|
|
| 1 |
+
(((2:0.10367283,0:0.07638217):0.02866363,1:-0.00768162):0.01689212,3:0.00184650,4:-0.00048450);
|
| 2 |
+
|
experiments/bioagent_bench/runs/scale_1000/comparative-genomics_20260515_135806/orthofinder_output/Results_May15/WorkingDirectory/SpeciesTrees_ids/OG0000020_tree_id.txt.tre
ADDED
|
@@ -0,0 +1,2 @@
|
|
|
|
|
|
|
|
|
|
| 1 |
+
((2:-0.05221125,0:0.05933325):0.10683800,(3:0.08582250,1:-0.08582150):0.09631500,4:-0.09285650);
|
| 2 |
+
|
experiments/bioagent_bench/runs/scale_1000/comparative-genomics_20260515_135806/orthofinder_output/Results_May15/WorkingDirectory/SpeciesTrees_ids/OG0000021_tree_id.txt.tre
ADDED
|
@@ -0,0 +1,2 @@
|
|
|
|
|
|
|
|
|
|
| 1 |
+
((2:0.16747850,0:0.33787950):0.17454071,(3:0.01916025,1:0.01392875):0.01108825,4:0.00856479);
|
| 2 |
+
|
experiments/bioagent_bench/runs/scale_1000/comparative-genomics_20260515_135806/orthofinder_output/Results_May15/WorkingDirectory/SpeciesTrees_ids/OG0000024_tree_id.txt.tre
ADDED
|
@@ -0,0 +1,2 @@
|
|
|
|
|
|
|
|
|
|
| 1 |
+
((2:0.43306662,0:0.33192837):0.35388488,(3:0.00070962,1:0.01638137):0.07691687,4:0.20889362);
|
| 2 |
+
|
experiments/bioagent_bench/runs/scale_1000/comparative-genomics_20260515_135806/orthofinder_output/Results_May15/WorkingDirectory/SpeciesTrees_ids/OG0000025_tree_id.txt.tre
ADDED
|
@@ -0,0 +1,2 @@
|
|
|
|
|
|
|
|
|
|
| 1 |
+
(1:0.00048250,(3:0.00839250,(2:0.69675200,0:0.18897100):0.22004850):0.00863300,4:0.00334650);
|
| 2 |
+
|
experiments/bioagent_bench/runs/scale_1000/comparative-genomics_20260515_135806/orthofinder_output/Results_May15/WorkingDirectory/SpeciesTrees_ids/OG0000026_tree_id.txt.tre
ADDED
|
@@ -0,0 +1,2 @@
|
|
|
|
|
|
|
|
|
|
| 1 |
+
(((2:0.35796714,1:0.00111586):0.00141414,3:0.00155300):0.01153948,0:0.01158767,4:0.01456533);
|
| 2 |
+
|
experiments/bioagent_bench/runs/scale_1000/comparative-genomics_20260515_135806/orthofinder_output/Results_May15/WorkingDirectory/SpeciesTrees_ids/OG0000031_tree_id.txt.tre
ADDED
|
@@ -0,0 +1,2 @@
|
|
|
|
|
|
|
|
|
|
| 1 |
+
(1:0.00762225,(3:0.03247950,(2:0.20135575,0:0.27084325):0.05811450):0.02344400,4:0.00143475);
|
| 2 |
+
|
experiments/bioagent_bench/runs/scale_1000/comparative-genomics_20260515_135806/orthofinder_output/Results_May15/WorkingDirectory/SpeciesTrees_ids/OG0000034_tree_id.txt.tre
ADDED
|
@@ -0,0 +1,2 @@
|
|
|
|
|
|
|
|
|
|
| 1 |
+
((2:0.01171750,0:0.03397150):0.00558351,(3:0.01393075,1:0.00028725):0.00439475,4:0.00511899);
|
| 2 |
+
|
experiments/bioagent_bench/runs/scale_1000/comparative-genomics_20260515_135806/orthofinder_output/Results_May15/WorkingDirectory/SpeciesTrees_ids/OG0000035_tree_id.txt.tre
ADDED
|
@@ -0,0 +1,2 @@
|
|
|
|
|
|
|
|
|
|
| 1 |
+
(((2:0.00575943,0:0.01965457):0.01033293,3:0.00071160):0.04558632,1:0.13095917,4:0.36028583);
|
| 2 |
+
|
experiments/bioagent_bench/runs/scale_1000/comparative-genomics_20260515_135806/orthofinder_output/Results_May15/WorkingDirectory/SpeciesTrees_ids/OG0000036_tree_id.txt.tre
ADDED
|
@@ -0,0 +1,2 @@
|
|
|
|
|
|
|
|
|
|
| 1 |
+
(2:0.00631574,((3:0.00431900,1:0.00831700):0.01086275,0:0.01530525):0.00174675,4:0.00430926);
|
| 2 |
+
|
experiments/bioagent_bench/runs/scale_1000/comparative-genomics_20260515_135806/orthofinder_output/Results_May15/WorkingDirectory/SpeciesTrees_ids/OG0000038_tree_id.txt.tre
ADDED
|
@@ -0,0 +1,2 @@
|
|
|
|
|
|
|
|
|
|
| 1 |
+
((2:0.19311600,0:0.38470200):0.13524250,(3:0.00000150,1:-0.00000050):0.00914000,4:0.01048150);
|
| 2 |
+
|
experiments/bioagent_bench/runs/scale_1000/comparative-genomics_20260515_135806/orthofinder_output/Results_May15/WorkingDirectory/SpeciesTrees_ids/OG0000039_tree_id.txt.tre
ADDED
|
@@ -0,0 +1,2 @@
|
|
|
|
|
|
|
|
|
|
| 1 |
+
(((1:0.03951113,0:0.05828887):0.00386088,3:0.01924012):0.19151937,2:0.16973238,4:1.04546463);
|
| 2 |
+
|
experiments/bioagent_bench/runs/scale_1000/comparative-genomics_20260515_135806/orthofinder_output/Results_May15/WorkingDirectory/SpeciesTrees_ids/OG0000048_tree_id.txt.tre
ADDED
|
@@ -0,0 +1,2 @@
|
|
|
|
|
|
|
|
|
|
| 1 |
+
(3:0.01141462,((1:-0.37558487,0:0.38201287):0.38793863,2:0.33051387):0.08286512,4:0.01432337);
|
| 2 |
+
|
experiments/bioagent_bench/runs/scale_1000/comparative-genomics_20260515_135806/orthofinder_output/Results_May15/WorkingDirectory/SpeciesTrees_ids/OG0000050_tree_id.txt.tre
ADDED
|
@@ -0,0 +1,2 @@
|
|
|
|
|
|
|
|
|
|
| 1 |
+
((2:0.13228563,0:0.00633938):0.05861987,(3:-0.00000012,1:0.00413412):0.00013438,4:-0.00000037);
|
| 2 |
+
|
experiments/bioagent_bench/runs/scale_1000/comparative-genomics_20260515_135806/orthofinder_output/Results_May15/WorkingDirectory/SpeciesTrees_ids/OG0000051_tree_id.txt.tre
ADDED
|
@@ -0,0 +1,2 @@
|
|
|
|
|
|
|
|
|
|
| 1 |
+
(1:0.02509014,(3:0.01914952,(2:0.49280067,0:0.31961333):0.35563584):0.01681248,4:0.00033686);
|
| 2 |
+
|
experiments/bioagent_bench/runs/scale_1000/comparative-genomics_20260515_135806/orthofinder_output/Results_May15/WorkingDirectory/SpeciesTrees_ids/OG0000056_tree_id.txt.tre
ADDED
|
@@ -0,0 +1,2 @@
|
|
|
|
|
|
|
|
|
|
| 1 |
+
((2:0.09821863,0:0.05176237):0.01923562,(3:0.00089813,1:0.00412087):0.00141413,4:0.00349087);
|
| 2 |
+
|
experiments/bioagent_bench/runs/scale_1000/comparative-genomics_20260515_135806/orthofinder_output/Results_May15/WorkingDirectory/SpeciesTrees_ids/OG0000058_tree_id.txt.tre
ADDED
|
@@ -0,0 +1,2 @@
|
|
|
|
|
|
|
|
|
|
| 1 |
+
(((2:1.08985800,0:0.00792700):0.01772675,1:0.00192825):0.00085425,3:-0.00000046,4:0.00278446);
|
| 2 |
+
|
experiments/bioagent_bench/runs/scale_1000/comparative-genomics_20260515_135806/orthofinder_output/Results_May15/WorkingDirectory/SpeciesTrees_ids/OG0000059_tree_id.txt.tre
ADDED
|
@@ -0,0 +1,2 @@
|
|
|
|
|
|
|
|
|
|
| 1 |
+
(1:0.00955662,(3:0.02385362,(2:0.18563262,0:0.09053738):0.04100187):0.03128287,4:0.01035537);
|
| 2 |
+
|
experiments/bioagent_bench/runs/scale_1000/comparative-genomics_20260515_135806/orthofinder_output/Results_May15/WorkingDirectory/SpeciesTrees_ids/OG0000060_tree_id.txt.tre
ADDED
|
@@ -0,0 +1,2 @@
|
|
|
|
|
|
|
|
|
|
| 1 |
+
(((2:0.19212450,0:0.05807550):0.05183975,1:0.01226175):0.00508925,3:0.00535394,4:0.00418206);
|
| 2 |
+
|
experiments/bioagent_bench/runs/scale_1000/comparative-genomics_20260515_135806/orthofinder_output/Results_May15/WorkingDirectory/SpeciesTrees_ids/OG0000062_tree_id.txt.tre
ADDED
|
@@ -0,0 +1,2 @@
|
|
|
|
|
|
|
|
|
|
| 1 |
+
(0:0.00283812,(1:0.00971187,(3:-0.76375688,2:1.03506588):0.76474812):0.00335963,4:0.00708688);
|
| 2 |
+
|
experiments/bioagent_bench/runs/scale_1000/comparative-genomics_20260515_135806/orthofinder_output/Results_May15/WorkingDirectory/SpeciesTrees_ids/OG0000063_tree_id.txt.tre
ADDED
|
@@ -0,0 +1,2 @@
|
|
|
|
|
|
|
|
|
|
| 1 |
+
((2:0.30674950,0:0.09406050):0.08256950,(3:0.00597250,1:0.00545250):0.00378850,4:0.00380500);
|
| 2 |
+
|
experiments/bioagent_bench/runs/scale_1000/comparative-genomics_20260515_135806/orthofinder_output/Results_May15/WorkingDirectory/SpeciesTrees_ids/OG0000066_tree_id.txt.tre
ADDED
|
@@ -0,0 +1,2 @@
|
|
|
|
|
|
|
|
|
|
| 1 |
+
(1:0.00275800,(3:0.00953300,(2:0.19565650,0:0.14411850):0.05953650):0.01250300,4:0.00000000);
|
| 2 |
+
|
experiments/bioagent_bench/runs/scale_1000/comparative-genomics_20260515_135806/orthofinder_output/Results_May15/WorkingDirectory/SpeciesTrees_ids/OG0000069_tree_id.txt.tre
ADDED
|
@@ -0,0 +1,2 @@
|
|
|
|
|
|
|
|
|
|
| 1 |
+
(((2:0.23037713,0:0.02842887):0.04819163,1:0.00582238):0.00552863,3:0.00185512,4:0.00135188);
|
| 2 |
+
|
experiments/bioagent_bench/runs/scale_1000/comparative-genomics_20260515_135806/orthofinder_output/Results_May15/WorkingDirectory/SpeciesTrees_ids/OG0000070_tree_id.txt.tre
ADDED
|
@@ -0,0 +1,2 @@
|
|
|
|
|
|
|
|
|
|
| 1 |
+
((2:0.24480017,0:0.11807983):0.13498272,(3:0.00000050,1:0.00000050):0.00430184,4:0.00279466);
|
| 2 |
+
|
experiments/bioagent_bench/runs/scale_1000/comparative-genomics_20260515_135806/orthofinder_output/Results_May15/WorkingDirectory/SpeciesTrees_ids/OG0000071_tree_id.txt.tre
ADDED
|
@@ -0,0 +1,2 @@
|
|
|
|
|
|
|
|
|
|
| 1 |
+
(1:0.00000000,(3:0.00000000,(2:0.17921150,0:0.07936850):0.05560250):0.00087800,4:0.00216000);
|
| 2 |
+
|
experiments/bioagent_bench/runs/scale_1000/comparative-genomics_20260515_135806/orthofinder_output/Results_May15/WorkingDirectory/SpeciesTrees_ids/OG0000072_tree_id.txt.tre
ADDED
|
@@ -0,0 +1,2 @@
|
|
|
|
|
|
|
|
|
|
| 1 |
+
(1:0.00724650,(3:-0.00000016,(2:0.19016567,0:0.04286533):0.02328595):0.00042066,4:-0.00000050);
|
| 2 |
+
|
experiments/bioagent_bench/runs/scale_1000/comparative-genomics_20260515_135806/orthofinder_output/Results_May15/WorkingDirectory/SpeciesTrees_ids/OG0000073_tree_id.txt.tre
ADDED
|
@@ -0,0 +1,2 @@
|
|
|
|
|
|
|
|
|
|
| 1 |
+
(((2:1.26603600,0:-0.01388100):0.21797550,1:0.00000050):-0.00000000,3:0.00000050,4:0.00000050);
|
| 2 |
+
|
experiments/bioagent_bench/runs/scale_1000/comparative-genomics_20260515_135806/orthofinder_output/Results_May15/WorkingDirectory/SpeciesTrees_ids/OG0000074_tree_id.txt.tre
ADDED
|
@@ -0,0 +1,2 @@
|
|
|
|
|
|
|
|
|
|
| 1 |
+
(1:0.00000050,(3:0.00194250,(2:0.01182150,0:0.08062150):0.00958700):0.00376600,4:0.00000050);
|
| 2 |
+
|
experiments/bioagent_bench/runs/scale_1000/comparative-genomics_20260515_135806/orthofinder_output/Results_May15/WorkingDirectory/SpeciesTrees_ids/OG0000075_tree_id.txt.tre
ADDED
|
@@ -0,0 +1,2 @@
|
|
|
|
|
|
|
|
|
|
| 1 |
+
(((2:0.07289050,0:1.84693450):0.01517700,1:0.00000050):0.00000000,3:0.00000050,4:0.00000050);
|
| 2 |
+
|
experiments/bioagent_bench/runs/scale_1000/comparative-genomics_20260515_135806/orthofinder_output/Results_May15/WorkingDirectory/SpeciesTrees_ids/OG0000077_tree_id.txt.tre
ADDED
|
@@ -0,0 +1,2 @@
|
|
|
|
|
|
|
|
|
|
| 1 |
+
(((2:0.02072550,0:1.06441250):0.00769400,1:0.00000050):0.00000000,3:0.00000050,4:0.00000050);
|
| 2 |
+
|
experiments/bioagent_bench/runs/scale_1000/comparative-genomics_20260515_135806/orthofinder_output/Results_May15/WorkingDirectory/SpeciesTrees_ids/OG0000079_tree_id.txt.tre
ADDED
|
@@ -0,0 +1,2 @@
|
|
|
|
|
|
|
|
|
|
| 1 |
+
((2:-0.00000000,(1:0.00000000,0:0.51692200):0.07590000):0.07318700,3:0.00000000,4:0.07503200);
|
| 2 |
+
|
experiments/bioagent_bench/runs/scale_1000/comparative-genomics_20260515_135806/orthofinder_output/Results_May15/WorkingDirectory/SpeciesTrees_ids/OG0000082_tree_id.txt.tre
ADDED
|
@@ -0,0 +1,2 @@
|
|
|
|
|
|
|
|
|
|
| 1 |
+
((2:0.07111700,0:0.05624500):0.01871150,(3:0.00378650,1:0.00132250):0.01840400,4:0.01560850);
|
| 2 |
+
|
experiments/bioagent_bench/runs/scale_1000/comparative-genomics_20260515_135806/orthofinder_output/Results_May15/WorkingDirectory/SpeciesTrees_ids/OG0000083_tree_id.txt.tre
ADDED
|
@@ -0,0 +1,2 @@
|
|
|
|
|
|
|
|
|
|
| 1 |
+
((2:0.68129013,0:0.27185487):0.14239487,(3:0.02065212,1:0.00613988):0.01599487,4:0.01051812);
|
| 2 |
+
|
experiments/bioagent_bench/runs/scale_1000/comparative-genomics_20260515_135806/orthofinder_output/Results_May15/WorkingDirectory/SpeciesTrees_ids/OG0000085_tree_id.txt.tre
ADDED
|
@@ -0,0 +1,2 @@
|
|
|
|
|
|
|
|
|
|
| 1 |
+
(1:0.00000000,(3:0.00175425,(2:0.52798950,0:-0.05655550):0.25810725):0.00250275,4:0.00919600);
|
| 2 |
+
|
experiments/bioagent_bench/runs/scale_1000/comparative-genomics_20260515_135806/orthofinder_output/Results_May15/WorkingDirectory/SpeciesTrees_ids/OG0000086_tree_id.txt.tre
ADDED
|
@@ -0,0 +1,2 @@
|
|
|
|
|
|
|
|
|
|
| 1 |
+
(1:0.02066696,(3:0.01884125,(2:0.43686200,0:0.24056800):0.08569175):0.00733475,4:0.01099204);
|
| 2 |
+
|
experiments/bioagent_bench/runs/scale_1000/comparative-genomics_20260515_135806/orthofinder_output/Results_May15/WorkingDirectory/SpeciesTrees_ids/OG0000087_tree_id.txt.tre
ADDED
|
@@ -0,0 +1,2 @@
|
|
|
|
|
|
|
|
|
|
| 1 |
+
((2:0.04231200,(1:0.25140883,0:-0.00329983):0.01742283):0.00211250,3:0.00375650,4:0.00745350);
|
| 2 |
+
|
experiments/bioagent_bench/runs/scale_1000/comparative-genomics_20260515_135806/orthofinder_output/Results_May15/WorkingDirectory/SpeciesTrees_ids/OG0000088_tree_id.txt.tre
ADDED
|
@@ -0,0 +1,2 @@
|
|
|
|
|
|
|
|
|
|
| 1 |
+
((2:0.00437350,0:0.00293650):0.10023588,(3:0.00425525,1:0.01324175):0.07770425,4:0.13043562);
|
| 2 |
+
|
experiments/bioagent_bench/runs/scale_1000/comparative-genomics_20260515_135806/orthofinder_output/Results_May15/WorkingDirectory/SpeciesTrees_ids/OG0000090_tree_id.txt.tre
ADDED
|
@@ -0,0 +1,2 @@
|
|
|
|
|
|
|
|
|
|
| 1 |
+
((2:0.33924967,0:0.18820933):0.07691123,(3:0.00000050,1:0.00000050):0.00728382,4:-0.00000032);
|
| 2 |
+
|
experiments/bioagent_bench/runs/scale_1000/comparative-genomics_20260515_135806/orthofinder_output/Results_May15/WorkingDirectory/SpeciesTrees_ids/OG0000091_tree_id.txt.tre
ADDED
|
@@ -0,0 +1,2 @@
|
|
|
|
|
|
|
|
|
|
| 1 |
+
(1:0.00226800,(3:0.00560950,(2:0.10870050,0:0.03501350):0.03322900):0.00086950,4:0.00549600);
|
| 2 |
+
|
experiments/bioagent_bench/runs/scale_1000/comparative-genomics_20260515_135806/orthofinder_output/Results_May15/WorkingDirectory/SpeciesTrees_ids/OG0000093_tree_id.txt.tre
ADDED
|
@@ -0,0 +1,2 @@
|
|
|
|
|
|
|
|
|
|
| 1 |
+
((0:0.01357653,(3:0.24994075,1:0.01464925):0.00377825):0.01548147,2:0.10815600,4:0.12249000);
|
| 2 |
+
|
experiments/bioagent_bench/runs/scale_1000/comparative-genomics_20260515_135806/orthofinder_output/Results_May15/WorkingDirectory/SpeciesTrees_ids/OG0000094_tree_id.txt.tre
ADDED
|
@@ -0,0 +1,2 @@
|
|
|
|
|
|
|
|
|
|
| 1 |
+
((1:0.00894300,(2:0.00586850,0:0.03934150):0.00105250):0.00602650,3:0.00349550,4:0.00088050);
|
| 2 |
+
|
experiments/bioagent_bench/runs/scale_1000/comparative-genomics_20260515_135806/orthofinder_output/Results_May15/WorkingDirectory/SpeciesTrees_ids/OG0000096_tree_id.txt.tre
ADDED
|
@@ -0,0 +1,2 @@
|
|
|
|
|
|
|
|
|
|
| 1 |
+
(1:0.00185651,(3:0.01371455,(2:0.22660283,0:0.05849817):0.06299935):0.01002195,4:0.00420849);
|
| 2 |
+
|
experiments/bioagent_bench/runs/scale_1000/comparative-genomics_20260515_135806/orthofinder_output/Results_May15/WorkingDirectory/SpeciesTrees_ids/OG0000098_tree_id.txt.tre
ADDED
|
@@ -0,0 +1,2 @@
|
|
|
|
|
|
|
|
|
|
| 1 |
+
(1:0.01486750,(3:0.00062950,(2:0.19978550,0:0.16863750):0.08855700):0.00586700,4:0.01808950);
|
| 2 |
+
|
experiments/bioagent_bench/runs/scale_1000/comparative-genomics_20260515_135806/orthofinder_output/Results_May15/WorkingDirectory/SpeciesTrees_ids/OG0000099_tree_id.txt.tre
ADDED
|
@@ -0,0 +1,2 @@
|
|
|
|
|
|
|
|
|
|
| 1 |
+
((1:0.11366075,(3:-0.03990600,2:0.87227700):0.21010375):0.07666825,0:0.35200975,4:0.12075925);
|
| 2 |
+
|
experiments/bioagent_bench/runs/scale_1000/comparative-genomics_20260515_135806/orthofinder_output/Results_May15/WorkingDirectory/SpeciesTrees_ids/OG0000101_tree_id.txt.tre
ADDED
|
@@ -0,0 +1,2 @@
|
|
|
|
|
|
|
|
|
|
| 1 |
+
(1:0.01189900,(3:0.01093850,(2:0.03081000,0:0.31585500):0.01366150):0.00210950,4:0.00899400);
|
| 2 |
+
|