stevenweaver commited on
Commit
ef4fd80
·
verified ·
1 Parent(s): 929749a

Model card: remove em-dashes from capabilities section

Browse files
Files changed (1) hide show
  1. README.md +3 -3
README.md CHANGED
@@ -33,9 +33,9 @@ The same model weights power three analyses, exposed as CLI subcommands:
33
 
34
  | Command | Analysis | Output |
35
  | :--- | :--- | :--- |
36
- | `predict` | **Episodic positive selection** — per-site MEME LRT surrogate (the core model). | per-site LRT + p-value |
37
- | `epistasis` | **Epistatic sector mining (ESSM)** — phylogenetic branch attribution, inter-site co-selection networks, in-silico Selection Deep Mutational Scanning, and multi-scale epistatic sectors. | co-selection edges, sectors, DMS sweep (JSON / GraphML / CSV) |
38
- | `phenotype` | **Directional phenotype-genotype association (PhyloWAS)** — associates sites with a trait across the tree and extracts Phenotype-Associated Residue Signatures (PARS). Supports curated phenotype presets (marine, echolocation, high-altitude, longevity, …) or a user trait table. | per-site trait association, p-values, FDR |
39
 
40
  `epistasis` and `phenotype` are **derived analyses built on the selection model** (its per-site drive and
41
  branch-level attributions); they do not require separate weights. The results below and the variants
 
33
 
34
  | Command | Analysis | Output |
35
  | :--- | :--- | :--- |
36
+ | `predict` | **Episodic positive selection**: per-site MEME LRT surrogate (the core model). | per-site LRT + p-value |
37
+ | `epistasis` | **Epistatic sector mining (ESSM)**: phylogenetic branch attribution, inter-site co-selection networks, in-silico Selection Deep Mutational Scanning, and multi-scale epistatic sectors. | co-selection edges, sectors, DMS sweep (JSON / GraphML / CSV) |
38
+ | `phenotype` | **Directional phenotype-genotype association (PhyloWAS)**: associates sites with a trait across the tree and extracts Phenotype-Associated Residue Signatures (PARS). Supports curated phenotype presets (marine, echolocation, high-altitude, longevity, …) or a user trait table. | per-site trait association, p-values, FDR |
39
 
40
  `epistasis` and `phenotype` are **derived analyses built on the selection model** (its per-site drive and
41
  branch-level attributions); they do not require separate weights. The results below and the variants