Ahmad2005 commited on
Commit
d388d33
·
verified ·
1 Parent(s): b0ca550

Add files using upload-large-folder tool

Browse files
Files changed (50) hide show
  1. .cache/pip/http-v2/0/4/4/7/c/0447ce2249fdae0f8cf52a43e01f215eacdf7c35d89a248bd4b4ebaa.body +0 -0
  2. .cache/pip/http-v2/3/3/2/7/a/3327a46f678846be6cb46f3352e6fba668d9664c70a79484c770e358 +0 -0
  3. .cache/pip/http-v2/3/8/6/0/e/3860e4de9ae53c79d2fd61419e9049df314ccc8b640782c02c6e2e2d +0 -0
  4. .cache/pip/http-v2/3/9/b/0/3/39b032291f3825af700bccccb41d7507c739ba2f89c5bbbc5b7b490d.body +0 -0
  5. .cache/pip/http-v2/4/3/e/a/8/43ea803ef69b1ff6bb6a759b6d0891ba2677cfcc307a77ebf42098b6 +0 -0
  6. .cache/pip/http-v2/4/3/e/a/8/43ea803ef69b1ff6bb6a759b6d0891ba2677cfcc307a77ebf42098b6.body +1383 -0
  7. .cache/pip/http-v2/4/5/2/4/1/45241d61b1606b84c3825a9119b750e7cd16e5fac504d31f79203a8e.body +84 -0
  8. .cache/pip/http-v2/4/7/a/1/f/47a1fcfcda9889c5e9fc07f976129358dec689ce97437905232762a1.body +0 -0
  9. .cache/pip/http-v2/4/a/5/b/6/4a5b6f0d76201de4cfd4884f5e95617a1848cf81c8357be4d12cbf6a +0 -0
  10. .cache/pip/http-v2/4/d/c/8/d/4dc8d567db4bc55c0684404c85a6b4572f87a99306be24cab65fbfae +0 -0
  11. .cache/pip/http-v2/4/d/c/8/d/4dc8d567db4bc55c0684404c85a6b4572f87a99306be24cab65fbfae.body +0 -0
  12. .cache/pip/http-v2/6/4/6/7/b/6467bdd236eabb4648139f514441e5510842fbc90755e4738c64fcf3.body +341 -0
  13. .cache/pip/http-v2/8/f/0/a/d/8f0ad583652318494c12da41e4d30ff6225ec73d448a0754a0a7e898 +0 -0
  14. .cache/pip/http-v2/9/0/6/7/9/906797ab7b3f56fdd856b186be66ce1ad5fb99862a404c1091a707b6 +0 -0
  15. .cache/pip/http-v2/9/0/6/7/9/906797ab7b3f56fdd856b186be66ce1ad5fb99862a404c1091a707b6.body +0 -0
  16. .cache/pip/http-v2/9/0/f/6/e/90f6e704e426d3e4b799bd86b309263491ea7f0afc8f3ceaab5d10eb +0 -0
  17. .cache/pip/http-v2/9/6/7/8/5/967857dd3681a1bb83c9632aad9815556f1da84934ad6aa3be0d7700 +0 -0
  18. .cache/pip/http-v2/9/6/7/8/5/967857dd3681a1bb83c9632aad9815556f1da84934ad6aa3be0d7700.body +0 -0
  19. .cache/pip/http-v2/9/6/e/6/8/96e68fa7e813913744eed43fc3c671900cf7eb7d5088536270636acf +0 -0
  20. .cache/pip/http-v2/9/b/0/a/e/9b0ae3352e0682a4ded5c6f53d9053328ff974179c7dcd6dac96d2a9 +0 -0
  21. .cache/pip/http-v2/9/b/0/c/d/9b0cd65992ff5b9edd0441126311787aa8872587ece580196906a213 +0 -0
  22. .cache/pip/http-v2/9/b/c/f/c/9bcfc39a5bcc4f49a5aca18ef0b4567e959c4b71251fb90ea1371fe7.body +1600 -0
  23. .cache/pip/http-v2/c/1/6/c/6/c16c6c635e568e65136b95a15ea17f91b43799aeb0a7e80b55d7a898 +0 -0
  24. .cache/pip/http-v2/c/d/5/d/e/cd5de44b899cbe1869765c21b55cffc53c0c0ffa9d3c6f1fd40a42a2 +0 -0
  25. BUSI_with_classes/.DS_Store +0 -0
  26. BUSI_with_classes/pipeline_check.json +0 -0
  27. MODEL_RUN_COMMANDS.md +121 -0
  28. foldsrunner_simplified_after_ablation.py +0 -0
  29. model_stats_s2_vs_s3.py +392 -0
  30. params/models_manifest.json +50 -0
  31. plot_s2_vs_s3.py +216 -0
  32. requirements_runpod.txt +13 -0
  33. runs/UPerNet_PVTv2_b2/repeated_holdout/stratified_holdout_v1/experiment_state.sqlite3 +0 -0
  34. runs/UPerNet_PVTv2_b2/repeated_holdout/stratified_holdout_v1/exports/aggregated_metrics_by_percent_strategy.csv +3 -0
  35. runs/UPerNet_PVTv2_b2/repeated_holdout/stratified_holdout_v1/exports/aggregated_metrics_by_percent_strategy.json +60 -0
  36. runs/UPerNet_PVTv2_b2/repeated_holdout/stratified_holdout_v1/exports/raw_run_metrics.csv +11 -0
  37. runs/UPerNet_PVTv2_b2/repeated_holdout/stratified_holdout_v1/exports/raw_run_metrics.json +282 -0
  38. runs/UPerNet_PVTv2_b2/repeated_holdout/stratified_holdout_v1/phase_010/pct_100/repeat_01/norm_stats_BUSI_with_classes_stratified_80_10_10_100pct_phase010_repeat01.json +526 -0
  39. runs/UPerNet_PVTv2_b2/repeated_holdout/stratified_holdout_v1/phase_010/pct_100/repeat_01/strategy_3/final/evaluation.json +824 -0
  40. runs/UPerNet_PVTv2_b2/repeated_holdout/stratified_holdout_v1/phase_010/pct_100/repeat_01/strategy_3/final/evaluation_results.xlsx +0 -0
  41. runs/UPerNet_PVTv2_b2/repeated_holdout/stratified_holdout_v1/phase_010/pct_100/repeat_01/strategy_3/final/evaluation_summary.json +4 -0
  42. runs/UPerNet_PVTv2_b2/repeated_holdout/stratified_holdout_v1/phase_010/pct_100/repeat_01/strategy_3/final/history.json +0 -0
  43. runs/UPerNet_PVTv2_b2/repeated_holdout/stratified_holdout_v1/phase_010/pct_100/repeat_01/strategy_3/final/low_iou_samples.csv +2 -0
  44. runs/UPerNet_PVTv2_b2/repeated_holdout/stratified_holdout_v1/phase_010/pct_100/repeat_01/strategy_3/final/run_config.json +112 -0
  45. runs/UPerNet_PVTv2_b2/repeated_holdout/stratified_holdout_v1/phase_010/pct_100/repeat_01/strategy_3/final/summary.json +34 -0
  46. runs/UPerNet_PVTv2_b2/repeated_holdout/stratified_holdout_v1/phase_010/pct_100/repeat_01/strategy_3/final/timing.csv +2 -0
  47. runs/UPerNet_PVTv2_b2/repeated_holdout/stratified_holdout_v1/phase_timing_summary.json +155 -0
  48. runs/_plots/summary_s2_vs_s3.csv +13 -0
  49. runs/_stats/ALL_MODELS_summary.csv +15 -0
  50. runs/_stats/ALL_MODELS_summary.xlsx +0 -0
.cache/pip/http-v2/0/4/4/7/c/0447ce2249fdae0f8cf52a43e01f215eacdf7c35d89a248bd4b4ebaa.body ADDED
Binary file (21.3 kB). View file
 
.cache/pip/http-v2/3/3/2/7/a/3327a46f678846be6cb46f3352e6fba668d9664c70a79484c770e358 ADDED
Binary file (1.23 kB). View file
 
.cache/pip/http-v2/3/8/6/0/e/3860e4de9ae53c79d2fd61419e9049df314ccc8b640782c02c6e2e2d ADDED
Binary file (1.89 kB). View file
 
.cache/pip/http-v2/3/9/b/0/3/39b032291f3825af700bccccb41d7507c739ba2f89c5bbbc5b7b490d.body ADDED
Binary file (12.2 kB). View file
 
.cache/pip/http-v2/4/3/e/a/8/43ea803ef69b1ff6bb6a759b6d0891ba2677cfcc307a77ebf42098b6 ADDED
Binary file (1.29 kB). View file
 
.cache/pip/http-v2/4/3/e/a/8/43ea803ef69b1ff6bb6a759b6d0891ba2677cfcc307a77ebf42098b6.body ADDED
@@ -0,0 +1,1383 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ Metadata-Version: 2.1
2
+ Name: pandas
3
+ Version: 3.0.5
4
+ Summary: Powerful data structures for data analysis, time series, and statistics
5
+ Author-Email: The Pandas Development Team <pandas-dev@python.org>
6
+ License: BSD 3-Clause License
7
+
8
+ Copyright (c) 2008-2011, AQR Capital Management, LLC, Lambda Foundry, Inc. and PyData Development Team
9
+ All rights reserved.
10
+
11
+ Copyright (c) 2011-2026, Open source contributors.
12
+
13
+ Redistribution and use in source and binary forms, with or without
14
+ modification, are permitted provided that the following conditions are met:
15
+
16
+ * Redistributions of source code must retain the above copyright notice, this
17
+ list of conditions and the following disclaimer.
18
+
19
+ * Redistributions in binary form must reproduce the above copyright notice,
20
+ this list of conditions and the following disclaimer in the documentation
21
+ and/or other materials provided with the distribution.
22
+
23
+ * Neither the name of the copyright holder nor the names of its
24
+ contributors may be used to endorse or promote products derived from
25
+ this software without specific prior written permission.
26
+
27
+ THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS"
28
+ AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE
29
+ IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE ARE
30
+ DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT HOLDER OR CONTRIBUTORS BE LIABLE
31
+ FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL
32
+ DAMAGES (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF SUBSTITUTE GOODS OR
33
+ SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER
34
+ CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY,
35
+ OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE
36
+ OF THIS SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
37
+ Copyright (c) 2010-2019 Keith Goodman
38
+ Copyright (c) 2019 Bottleneck Developers
39
+ All rights reserved.
40
+
41
+ Redistribution and use in source and binary forms, with or without
42
+ modification, are permitted provided that the following conditions are met:
43
+
44
+ * Redistributions of source code must retain the above copyright notice,
45
+ this list of conditions and the following disclaimer.
46
+
47
+ * Redistributions in binary form must reproduce the above copyright
48
+ notice, this list of conditions and the following disclaimer in the
49
+ documentation and/or other materials provided with the distribution.
50
+
51
+ THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS"
52
+ AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE
53
+ IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE
54
+ ARE DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT HOLDER OR CONTRIBUTORS BE
55
+ LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR
56
+ CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF
57
+ SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS
58
+ INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN
59
+ CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE)
60
+ ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF ADVISED OF THE
61
+ POSSIBILITY OF SUCH DAMAGE.Copyright 2017- Paul Ganssle <paul@ganssle.io>
62
+ Copyright 2017- dateutil contributors (see AUTHORS file)
63
+
64
+ Licensed under the Apache License, Version 2.0 (the "License");
65
+ you may not use this file except in compliance with the License.
66
+ You may obtain a copy of the License at
67
+
68
+ http://www.apache.org/licenses/LICENSE-2.0
69
+
70
+ Unless required by applicable law or agreed to in writing, software
71
+ distributed under the License is distributed on an "AS IS" BASIS,
72
+ WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
73
+ See the License for the specific language governing permissions and
74
+ limitations under the License.
75
+
76
+ The above license applies to all contributions after 2017-12-01, as well as
77
+ all contributions that have been re-licensed (see AUTHORS file for the list of
78
+ contributors who have re-licensed their code).
79
+ --------------------------------------------------------------------------------
80
+ dateutil - Extensions to the standard Python datetime module.
81
+
82
+ Copyright (c) 2003-2011 - Gustavo Niemeyer <gustavo@niemeyer.net>
83
+ Copyright (c) 2012-2014 - Tomi Pieviläinen <tomi.pievilainen@iki.fi>
84
+ Copyright (c) 2014-2016 - Yaron de Leeuw <me@jarondl.net>
85
+ Copyright (c) 2015- - Paul Ganssle <paul@ganssle.io>
86
+ Copyright (c) 2015- - dateutil contributors (see AUTHORS file)
87
+
88
+ All rights reserved.
89
+
90
+ Redistribution and use in source and binary forms, with or without
91
+ modification, are permitted provided that the following conditions are met:
92
+
93
+ * Redistributions of source code must retain the above copyright notice,
94
+ this list of conditions and the following disclaimer.
95
+ * Redistributions in binary form must reproduce the above copyright notice,
96
+ this list of conditions and the following disclaimer in the documentation
97
+ and/or other materials provided with the distribution.
98
+ * Neither the name of the copyright holder nor the names of its
99
+ contributors may be used to endorse or promote products derived from
100
+ this software without specific prior written permission.
101
+
102
+ THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS
103
+ "AS IS" AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT
104
+ LIMITED TO, THE IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR
105
+ A PARTICULAR PURPOSE ARE DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT OWNER OR
106
+ CONTRIBUTORS BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL,
107
+ EXEMPLARY, OR CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO,
108
+ PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR
109
+ PROFITS; OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF
110
+ LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING
111
+ NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS
112
+ SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
113
+
114
+ The above BSD License Applies to all code, even that also covered by Apache 2.0.# MIT License
115
+
116
+ Copyright (c) 2019 Hadley Wickham; RStudio; and Evan Miller
117
+
118
+ Permission is hereby granted, free of charge, to any person obtaining a copy
119
+ of this software and associated documentation files (the "Software"), to deal
120
+ in the Software without restriction, including without limitation the rights
121
+ to use, copy, modify, merge, publish, distribute, sublicense, and/or sell
122
+ copies of the Software, and to permit persons to whom the Software is
123
+ furnished to do so, subject to the following conditions:
124
+
125
+ The above copyright notice and this permission notice shall be included in all
126
+ copies or substantial portions of the Software.
127
+
128
+ THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR
129
+ IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,
130
+ FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE
131
+ AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER
132
+ LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM,
133
+ OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE
134
+ SOFTWARE.
135
+ Based on http://opensource.org/licenses/MIT
136
+
137
+ This is a template. Complete and ship as file LICENSE the following 2
138
+ lines (only)
139
+
140
+ YEAR:
141
+ COPYRIGHT HOLDER:
142
+
143
+ and specify as
144
+
145
+ License: MIT + file LICENSE
146
+
147
+ Copyright (c) <YEAR>, <COPYRIGHT HOLDER>
148
+
149
+ Permission is hereby granted, free of charge, to any person obtaining
150
+ a copy of this software and associated documentation files (the
151
+ "Software"), to deal in the Software without restriction, including
152
+ without limitation the rights to use, copy, modify, merge, publish,
153
+ distribute, sublicense, and/or sell copies of the Software, and to
154
+ permit persons to whom the Software is furnished to do so, subject to
155
+ the following conditions:
156
+
157
+ The above copyright notice and this permission notice shall be
158
+ included in all copies or substantial portions of the Software.
159
+
160
+ THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND,
161
+ EXPRESS OR IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF
162
+ MERCHANTABILITY, FITNESS FOR A PARTICULAR PURPOSE AND
163
+ NONINFRINGEMENT. IN NO EVENT SHALL THE AUTHORS OR COPYRIGHT HOLDERS BE
164
+ LIABLE FOR ANY CLAIM, DAMAGES OR OTHER LIABILITY, WHETHER IN AN ACTION
165
+ OF CONTRACT, TORT OR OTHERWISE, ARISING FROM, OUT OF OR IN CONNECTION
166
+ WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE SOFTWARE.
167
+ The MIT License
168
+
169
+ Copyright (c) 2008- Attractive Chaos <attractor@live.co.uk>
170
+
171
+ Permission is hereby granted, free of charge, to any person obtaining
172
+ a copy of this software and associated documentation files (the
173
+ "Software"), to deal in the Software without restriction, including
174
+ without limitation the rights to use, copy, modify, merge, publish,
175
+ distribute, sublicense, and/or sell copies of the Software, and to
176
+ permit persons to whom the Software is furnished to do so, subject to
177
+ the following conditions:
178
+
179
+ The above copyright notice and this permission notice shall be
180
+ included in all copies or substantial portions of the Software.
181
+
182
+ THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND,
183
+ EXPRESS OR IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF
184
+ MERCHANTABILITY, FITNESS FOR A PARTICULAR PURPOSE AND
185
+ NONINFRINGEMENT. IN NO EVENT SHALL THE AUTHORS OR COPYRIGHT HOLDERS
186
+ BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER LIABILITY, WHETHER IN AN
187
+ ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM, OUT OF OR IN
188
+ CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE
189
+ SOFTWARE.musl as a whole is licensed under the following standard MIT license:
190
+
191
+ ----------------------------------------------------------------------
192
+ Copyright © 2005-2020 Rich Felker, et al.
193
+
194
+ Permission is hereby granted, free of charge, to any person obtaining
195
+ a copy of this software and associated documentation files (the
196
+ "Software"), to deal in the Software without restriction, including
197
+ without limitation the rights to use, copy, modify, merge, publish,
198
+ distribute, sublicense, and/or sell copies of the Software, and to
199
+ permit persons to whom the Software is furnished to do so, subject to
200
+ the following conditions:
201
+
202
+ The above copyright notice and this permission notice shall be
203
+ included in all copies or substantial portions of the Software.
204
+
205
+ THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND,
206
+ EXPRESS OR IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF
207
+ MERCHANTABILITY, FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT.
208
+ IN NO EVENT SHALL THE AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY
209
+ CLAIM, DAMAGES OR OTHER LIABILITY, WHETHER IN AN ACTION OF CONTRACT,
210
+ TORT OR OTHERWISE, ARISING FROM, OUT OF OR IN CONNECTION WITH THE
211
+ SOFTWARE OR THE USE OR OTHER DEALINGS IN THE SOFTWARE.
212
+ ----------------------------------------------------------------------
213
+
214
+ Authors/contributors include:
215
+
216
+ A. Wilcox
217
+ Ada Worcester
218
+ Alex Dowad
219
+ Alex Suykov
220
+ Alexander Monakov
221
+ Andre McCurdy
222
+ Andrew Kelley
223
+ Anthony G. Basile
224
+ Aric Belsito
225
+ Arvid Picciani
226
+ Bartosz Brachaczek
227
+ Benjamin Peterson
228
+ Bobby Bingham
229
+ Boris Brezillon
230
+ Brent Cook
231
+ Chris Spiegel
232
+ Clément Vasseur
233
+ Daniel Micay
234
+ Daniel Sabogal
235
+ Daurnimator
236
+ David Carlier
237
+ David Edelsohn
238
+ Denys Vlasenko
239
+ Dmitry Ivanov
240
+ Dmitry V. Levin
241
+ Drew DeVault
242
+ Emil Renner Berthing
243
+ Fangrui Song
244
+ Felix Fietkau
245
+ Felix Janda
246
+ Gianluca Anzolin
247
+ Hauke Mehrtens
248
+ He X
249
+ Hiltjo Posthuma
250
+ Isaac Dunham
251
+ Jaydeep Patil
252
+ Jens Gustedt
253
+ Jeremy Huntwork
254
+ Jo-Philipp Wich
255
+ Joakim Sindholt
256
+ John Spencer
257
+ Julien Ramseier
258
+ Justin Cormack
259
+ Kaarle Ritvanen
260
+ Khem Raj
261
+ Kylie McClain
262
+ Leah Neukirchen
263
+ Luca Barbato
264
+ Luka Perkov
265
+ M Farkas-Dyck (Strake)
266
+ Mahesh Bodapati
267
+ Markus Wichmann
268
+ Masanori Ogino
269
+ Michael Clark
270
+ Michael Forney
271
+ Mikhail Kremnyov
272
+ Natanael Copa
273
+ Nicholas J. Kain
274
+ orc
275
+ Pascal Cuoq
276
+ Patrick Oppenlander
277
+ Petr Hosek
278
+ Petr Skocik
279
+ Pierre Carrier
280
+ Reini Urban
281
+ Rich Felker
282
+ Richard Pennington
283
+ Ryan Fairfax
284
+ Samuel Holland
285
+ Segev Finer
286
+ Shiz
287
+ sin
288
+ Solar Designer
289
+ Stefan Kristiansson
290
+ Stefan O'Rear
291
+ Szabolcs Nagy
292
+ Timo Teräs
293
+ Trutz Behn
294
+ Valentin Ochs
295
+ Will Dietz
296
+ William Haddon
297
+ William Pitcock
298
+
299
+ Portions of this software are derived from third-party works licensed
300
+ under terms compatible with the above MIT license:
301
+
302
+ The TRE regular expression implementation (src/regex/reg* and
303
+ src/regex/tre*) is Copyright © 2001-2008 Ville Laurikari and licensed
304
+ under a 2-clause BSD license (license text in the source files). The
305
+ included version has been heavily modified by Rich Felker in 2012, in
306
+ the interests of size, simplicity, and namespace cleanliness.
307
+
308
+ Much of the math library code (src/math/* and src/complex/*) is
309
+ Copyright © 1993,2004 Sun Microsystems or
310
+ Copyright © 2003-2011 David Schultz or
311
+ Copyright © 2003-2009 Steven G. Kargl or
312
+ Copyright © 2003-2009 Bruce D. Evans or
313
+ Copyright © 2008 Stephen L. Moshier or
314
+ Copyright © 2017-2018 Arm Limited
315
+ and labelled as such in comments in the individual source files. All
316
+ have been licensed under extremely permissive terms.
317
+
318
+ The ARM memcpy code (src/string/arm/memcpy.S) is Copyright © 2008
319
+ The Android Open Source Project and is licensed under a two-clause BSD
320
+ license. It was taken from Bionic libc, used on Android.
321
+
322
+ The AArch64 memcpy and memset code (src/string/aarch64/*) are
323
+ Copyright © 1999-2019, Arm Limited.
324
+
325
+ The implementation of DES for crypt (src/crypt/crypt_des.c) is
326
+ Copyright © 1994 David Burren. It is licensed under a BSD license.
327
+
328
+ The implementation of blowfish crypt (src/crypt/crypt_blowfish.c) was
329
+ originally written by Solar Designer and placed into the public
330
+ domain. The code also comes with a fallback permissive license for use
331
+ in jurisdictions that may not recognize the public domain.
332
+
333
+ The smoothsort implementation (src/stdlib/qsort.c) is Copyright © 2011
334
+ Valentin Ochs and is licensed under an MIT-style license.
335
+
336
+ The x86_64 port was written by Nicholas J. Kain and is licensed under
337
+ the standard MIT terms.
338
+
339
+ The mips and microblaze ports were originally written by Richard
340
+ Pennington for use in the ellcc project. The original code was adapted
341
+ by Rich Felker for build system and code conventions during upstream
342
+ integration. It is licensed under the standard MIT terms.
343
+
344
+ The mips64 port was contributed by Imagination Technologies and is
345
+ licensed under the standard MIT terms.
346
+
347
+ The powerpc port was also originally written by Richard Pennington,
348
+ and later supplemented and integrated by John Spencer. It is licensed
349
+ under the standard MIT terms.
350
+
351
+ All other files which have no copyright comments are original works
352
+ produced specifically for use as part of this library, written either
353
+ by Rich Felker, the main author of the library, or by one or more
354
+ contibutors listed above. Details on authorship of individual files
355
+ can be found in the git version control history of the project. The
356
+ omission of copyright and license comments in each file is in the
357
+ interest of source tree size.
358
+
359
+ In addition, permission is hereby granted for all public header files
360
+ (include/* and arch/*/bits/*) and crt files intended to be linked into
361
+ applications (crt/*, ldso/dlstart.c, and arch/*/crt_arch.h) to omit
362
+ the copyright notice and permission notice otherwise required by the
363
+ license, and to use these files without any requirement of
364
+ attribution. These files include substantial contributions from:
365
+
366
+ Bobby Bingham
367
+ John Spencer
368
+ Nicholas J. Kain
369
+ Rich Felker
370
+ Richard Pennington
371
+ Stefan Kristiansson
372
+ Szabolcs Nagy
373
+
374
+ all of whom have explicitly granted such permission.
375
+
376
+ This file previously contained text expressing a belief that most of
377
+ the files covered by the above exception were sufficiently trivial not
378
+ to be subject to copyright, resulting in confusion over whether it
379
+ negated the permissions granted in the license. In the spirit of
380
+ permissive licensing, and of not having licensing issues being an
381
+ obstacle to adoption, that text has been removed.Copyright (c) 2005-2023, NumPy Developers.
382
+ All rights reserved.
383
+
384
+ Redistribution and use in source and binary forms, with or without
385
+ modification, are permitted provided that the following conditions are
386
+ met:
387
+
388
+ * Redistributions of source code must retain the above copyright
389
+ notice, this list of conditions and the following disclaimer.
390
+
391
+ * Redistributions in binary form must reproduce the above
392
+ copyright notice, this list of conditions and the following
393
+ disclaimer in the documentation and/or other materials provided
394
+ with the distribution.
395
+
396
+ * Neither the name of the NumPy Developers nor the names of any
397
+ contributors may be used to endorse or promote products derived
398
+ from this software without specific prior written permission.
399
+
400
+ THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS
401
+ "AS IS" AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT
402
+ LIMITED TO, THE IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR
403
+ A PARTICULAR PURPOSE ARE DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT
404
+ OWNER OR CONTRIBUTORS BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL,
405
+ SPECIAL, EXEMPLARY, OR CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT
406
+ LIMITED TO, PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES; LOSS OF USE,
407
+ DATA, OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON ANY
408
+ THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT
409
+ (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE
410
+ OF THIS SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
411
+ Apache License
412
+ Version 2.0, January 2004
413
+ http://www.apache.org/licenses/
414
+
415
+ TERMS AND CONDITIONS FOR USE, REPRODUCTION, AND DISTRIBUTION
416
+
417
+ 1. Definitions.
418
+
419
+ "License" shall mean the terms and conditions for use, reproduction,
420
+ and distribution as defined by Sections 1 through 9 of this document.
421
+
422
+ "Licensor" shall mean the copyright owner or entity authorized by
423
+ the copyright owner that is granting the License.
424
+
425
+ "Legal Entity" shall mean the union of the acting entity and all
426
+ other entities that control, are controlled by, or are under common
427
+ control with that entity. For the purposes of this definition,
428
+ "control" means (i) the power, direct or indirect, to cause the
429
+ direction or management of such entity, whether by contract or
430
+ otherwise, or (ii) ownership of fifty percent (50%) or more of the
431
+ outstanding shares, or (iii) beneficial ownership of such entity.
432
+
433
+ "You" (or "Your") shall mean an individual or Legal Entity
434
+ exercising permissions granted by this License.
435
+
436
+ "Source" form shall mean the preferred form for making modifications,
437
+ including but not limited to software source code, documentation
438
+ source, and configuration files.
439
+
440
+ "Object" form shall mean any form resulting from mechanical
441
+ transformation or translation of a Source form, including but
442
+ not limited to compiled object code, generated documentation,
443
+ and conversions to other media types.
444
+
445
+ "Work" shall mean the work of authorship, whether in Source or
446
+ Object form, made available under the License, as indicated by a
447
+ copyright notice that is included in or attached to the work
448
+ (an example is provided in the Appendix below).
449
+
450
+ "Derivative Works" shall mean any work, whether in Source or Object
451
+ form, that is based on (or derived from) the Work and for which the
452
+ editorial revisions, annotations, elaborations, or other modifications
453
+ represent, as a whole, an original work of authorship. For the purposes
454
+ of this License, Derivative Works shall not include works that remain
455
+ separable from, or merely link (or bind by name) to the interfaces of,
456
+ the Work and Derivative Works thereof.
457
+
458
+ "Contribution" shall mean any work of authorship, including
459
+ the original version of the Work and any modifications or additions
460
+ to that Work or Derivative Works thereof, that is intentionally
461
+ submitted to Licensor for inclusion in the Work by the copyright owner
462
+ or by an individual or Legal Entity authorized to submit on behalf of
463
+ the copyright owner. For the purposes of this definition, "submitted"
464
+ means any form of electronic, verbal, or written communication sent
465
+ to the Licensor or its representatives, including but not limited to
466
+ communication on electronic mailing lists, source code control systems,
467
+ and issue tracking systems that are managed by, or on behalf of, the
468
+ Licensor for the purpose of discussing and improving the Work, but
469
+ excluding communication that is conspicuously marked or otherwise
470
+ designated in writing by the copyright owner as "Not a Contribution."
471
+
472
+ "Contributor" shall mean Licensor and any individual or Legal Entity
473
+ on behalf of whom a Contribution has been received by Licensor and
474
+ subsequently incorporated within the Work.
475
+
476
+ 2. Grant of Copyright License. Subject to the terms and conditions of
477
+ this License, each Contributor hereby grants to You a perpetual,
478
+ worldwide, non-exclusive, no-charge, royalty-free, irrevocable
479
+ copyright license to reproduce, prepare Derivative Works of,
480
+ publicly display, publicly perform, sublicense, and distribute the
481
+ Work and such Derivative Works in Source or Object form.
482
+
483
+ 3. Grant of Patent License. Subject to the terms and conditions of
484
+ this License, each Contributor hereby grants to You a perpetual,
485
+ worldwide, non-exclusive, no-charge, royalty-free, irrevocable
486
+ (except as stated in this section) patent license to make, have made,
487
+ use, offer to sell, sell, import, and otherwise transfer the Work,
488
+ where such license applies only to those patent claims licensable
489
+ by such Contributor that are necessarily infringed by their
490
+ Contribution(s) alone or by combination of their Contribution(s)
491
+ with the Work to which such Contribution(s) was submitted. If You
492
+ institute patent litigation against any entity (including a
493
+ cross-claim or counterclaim in a lawsuit) alleging that the Work
494
+ or a Contribution incorporated within the Work constitutes direct
495
+ or contributory patent infringement, then any patent licenses
496
+ granted to You under this License for that Work shall terminate
497
+ as of the date such litigation is filed.
498
+
499
+ 4. Redistribution. You may reproduce and distribute copies of the
500
+ Work or Derivative Works thereof in any medium, with or without
501
+ modifications, and in Source or Object form, provided that You
502
+ meet the following conditions:
503
+
504
+ (a) You must give any other recipients of the Work or
505
+ Derivative Works a copy of this License; and
506
+
507
+ (b) You must cause any modified files to carry prominent notices
508
+ stating that You changed the files; and
509
+
510
+ (c) You must retain, in the Source form of any Derivative Works
511
+ that You distribute, all copyright, patent, trademark, and
512
+ attribution notices from the Source form of the Work,
513
+ excluding those notices that do not pertain to any part of
514
+ the Derivative Works; and
515
+
516
+ (d) If the Work includes a "NOTICE" text file as part of its
517
+ distribution, then any Derivative Works that You distribute must
518
+ include a readable copy of the attribution notices contained
519
+ within such NOTICE file, excluding those notices that do not
520
+ pertain to any part of the Derivative Works, in at least one
521
+ of the following places: within a NOTICE text file distributed
522
+ as part of the Derivative Works; within the Source form or
523
+ documentation, if provided along with the Derivative Works; or,
524
+ within a display generated by the Derivative Works, if and
525
+ wherever such third-party notices normally appear. The contents
526
+ of the NOTICE file are for informational purposes only and
527
+ do not modify the License. You may add Your own attribution
528
+ notices within Derivative Works that You distribute, alongside
529
+ or as an addendum to the NOTICE text from the Work, provided
530
+ that such additional attribution notices cannot be construed
531
+ as modifying the License.
532
+
533
+ You may add Your own copyright statement to Your modifications and
534
+ may provide additional or different license terms and conditions
535
+ for use, reproduction, or distribution of Your modifications, or
536
+ for any such Derivative Works as a whole, provided Your use,
537
+ reproduction, and distribution of the Work otherwise complies with
538
+ the conditions stated in this License.
539
+
540
+ 5. Submission of Contributions. Unless You explicitly state otherwise,
541
+ any Contribution intentionally submitted for inclusion in the Work
542
+ by You to the Licensor shall be under the terms and conditions of
543
+ this License, without any additional terms or conditions.
544
+ Notwithstanding the above, nothing herein shall supersede or modify
545
+ the terms of any separate license agreement you may have executed
546
+ with Licensor regarding such Contributions.
547
+
548
+ 6. Trademarks. This License does not grant permission to use the trade
549
+ names, trademarks, service marks, or product names of the Licensor,
550
+ except as required for reasonable and customary use in describing the
551
+ origin of the Work and reproducing the content of the NOTICE file.
552
+
553
+ 7. Disclaimer of Warranty. Unless required by applicable law or
554
+ agreed to in writing, Licensor provides the Work (and each
555
+ Contributor provides its Contributions) on an "AS IS" BASIS,
556
+ WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or
557
+ implied, including, without limitation, any warranties or conditions
558
+ of TITLE, NON-INFRINGEMENT, MERCHANTABILITY, or FITNESS FOR A
559
+ PARTICULAR PURPOSE. You are solely responsible for determining the
560
+ appropriateness of using or redistributing the Work and assume any
561
+ risks associated with Your exercise of permissions under this License.
562
+
563
+ 8. Limitation of Liability. In no event and under no legal theory,
564
+ whether in tort (including negligence), contract, or otherwise,
565
+ unless required by applicable law (such as deliberate and grossly
566
+ negligent acts) or agreed to in writing, shall any Contributor be
567
+ liable to You for damages, including any direct, indirect, special,
568
+ incidental, or consequential damages of any character arising as a
569
+ result of this License or out of the use or inability to use the
570
+ Work (including but not limited to damages for loss of goodwill,
571
+ work stoppage, computer failure or malfunction, or any and all
572
+ other commercial damages or losses), even if such Contributor
573
+ has been advised of the possibility of such damages.
574
+
575
+ 9. Accepting Warranty or Additional Liability. While redistributing
576
+ the Work or Derivative Works thereof, You may choose to offer,
577
+ and charge a fee for, acceptance of support, warranty, indemnity,
578
+ or other liability obligations and/or rights consistent with this
579
+ License. However, in accepting such obligations, You may act only
580
+ on Your own behalf and on Your sole responsibility, not on behalf
581
+ of any other Contributor, and only if You agree to indemnify,
582
+ defend, and hold each Contributor harmless for any liability
583
+ incurred by, or claims asserted against, such Contributor by reason
584
+ of your accepting any such warranty or additional liability.
585
+
586
+ END OF TERMS AND CONDITIONS
587
+
588
+
589
+ Copyright (c) Donald Stufft and individual contributors.
590
+ All rights reserved.
591
+
592
+ Redistribution and use in source and binary forms, with or without
593
+ modification, are permitted provided that the following conditions are met:
594
+
595
+ 1. Redistributions of source code must retain the above copyright notice,
596
+ this list of conditions and the following disclaimer.
597
+
598
+ 2. Redistributions in binary form must reproduce the above copyright
599
+ notice, this list of conditions and the following disclaimer in the
600
+ documentation and/or other materials provided with the distribution.
601
+
602
+ THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS" AND
603
+ ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE IMPLIED
604
+ WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE ARE
605
+ DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT HOLDER OR CONTRIBUTORS BE LIABLE
606
+ FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL
607
+ DAMAGES (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF SUBSTITUTE GOODS OR
608
+ SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER
609
+ CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY,
610
+ OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE
611
+ OF THIS SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.A. HISTORY OF THE SOFTWARE
612
+ ==========================
613
+
614
+ Python was created in the early 1990s by Guido van Rossum at Stichting
615
+ Mathematisch Centrum (CWI, see https://www.cwi.nl) in the Netherlands
616
+ as a successor of a language called ABC. Guido remains Python's
617
+ principal author, although it includes many contributions from others.
618
+
619
+ In 1995, Guido continued his work on Python at the Corporation for
620
+ National Research Initiatives (CNRI, see https://www.cnri.reston.va.us)
621
+ in Reston, Virginia where he released several versions of the
622
+ software.
623
+
624
+ In May 2000, Guido and the Python core development team moved to
625
+ BeOpen.com to form the BeOpen PythonLabs team. In October of the same
626
+ year, the PythonLabs team moved to Digital Creations, which became
627
+ Zope Corporation. In 2001, the Python Software Foundation (PSF, see
628
+ https://www.python.org/psf/) was formed, a non-profit organization
629
+ created specifically to own Python-related Intellectual Property.
630
+ Zope Corporation was a sponsoring member of the PSF.
631
+
632
+ All Python releases are Open Source (see https://opensource.org for
633
+ the Open Source Definition). Historically, most, but not all, Python
634
+ releases have also been GPL-compatible; the table below summarizes
635
+ the various releases.
636
+
637
+ Release Derived Year Owner GPL-
638
+ from compatible? (1)
639
+
640
+ 0.9.0 thru 1.2 1991-1995 CWI yes
641
+ 1.3 thru 1.5.2 1.2 1995-1999 CNRI yes
642
+ 1.6 1.5.2 2000 CNRI no
643
+ 2.0 1.6 2000 BeOpen.com no
644
+ 1.6.1 1.6 2001 CNRI yes (2)
645
+ 2.1 2.0+1.6.1 2001 PSF no
646
+ 2.0.1 2.0+1.6.1 2001 PSF yes
647
+ 2.1.1 2.1+2.0.1 2001 PSF yes
648
+ 2.1.2 2.1.1 2002 PSF yes
649
+ 2.1.3 2.1.2 2002 PSF yes
650
+ 2.2 and above 2.1.1 2001-now PSF yes
651
+
652
+ Footnotes:
653
+
654
+ (1) GPL-compatible doesn't mean that we're distributing Python under
655
+ the GPL. All Python licenses, unlike the GPL, let you distribute
656
+ a modified version without making your changes open source. The
657
+ GPL-compatible licenses make it possible to combine Python with
658
+ other software that is released under the GPL; the others don't.
659
+
660
+ (2) According to Richard Stallman, 1.6.1 is not GPL-compatible,
661
+ because its license has a choice of law clause. According to
662
+ CNRI, however, Stallman's lawyer has told CNRI's lawyer that 1.6.1
663
+ is "not incompatible" with the GPL.
664
+
665
+ Thanks to the many outside volunteers who have worked under Guido's
666
+ direction to make these releases possible.
667
+
668
+
669
+ B. TERMS AND CONDITIONS FOR ACCESSING OR OTHERWISE USING PYTHON
670
+ ===============================================================
671
+
672
+ Python software and documentation are licensed under the
673
+ Python Software Foundation License Version 2.
674
+
675
+ Starting with Python 3.8.6, examples, recipes, and other code in
676
+ the documentation are dual licensed under the PSF License Version 2
677
+ and the Zero-Clause BSD license.
678
+
679
+ Some software incorporated into Python is under different licenses.
680
+ The licenses are listed with code falling under that license.
681
+
682
+
683
+ PYTHON SOFTWARE FOUNDATION LICENSE VERSION 2
684
+ --------------------------------------------
685
+
686
+ 1. This LICENSE AGREEMENT is between the Python Software Foundation
687
+ ("PSF"), and the Individual or Organization ("Licensee") accessing and
688
+ otherwise using this software ("Python") in source or binary form and
689
+ its associated documentation.
690
+
691
+ 2. Subject to the terms and conditions of this License Agreement, PSF hereby
692
+ grants Licensee a nonexclusive, royalty-free, world-wide license to reproduce,
693
+ analyze, test, perform and/or display publicly, prepare derivative works,
694
+ distribute, and otherwise use Python alone or in any derivative version,
695
+ provided, however, that PSF's License Agreement and PSF's notice of copyright,
696
+ i.e., "Copyright (c) 2001, 2002, 2003, 2004, 2005, 2006, 2007, 2008, 2009, 2010,
697
+ 2011, 2012, 2013, 2014, 2015, 2016, 2017, 2018, 2019, 2020, 2021, 2022, 2023 Python Software Foundation;
698
+ All Rights Reserved" are retained in Python alone or in any derivative version
699
+ prepared by Licensee.
700
+
701
+ 3. In the event Licensee prepares a derivative work that is based on
702
+ or incorporates Python or any part thereof, and wants to make
703
+ the derivative work available to others as provided herein, then
704
+ Licensee hereby agrees to include in any such work a brief summary of
705
+ the changes made to Python.
706
+
707
+ 4. PSF is making Python available to Licensee on an "AS IS"
708
+ basis. PSF MAKES NO REPRESENTATIONS OR WARRANTIES, EXPRESS OR
709
+ IMPLIED. BY WAY OF EXAMPLE, BUT NOT LIMITATION, PSF MAKES NO AND
710
+ DISCLAIMS ANY REPRESENTATION OR WARRANTY OF MERCHANTABILITY OR FITNESS
711
+ FOR ANY PARTICULAR PURPOSE OR THAT THE USE OF PYTHON WILL NOT
712
+ INFRINGE ANY THIRD PARTY RIGHTS.
713
+
714
+ 5. PSF SHALL NOT BE LIABLE TO LICENSEE OR ANY OTHER USERS OF PYTHON
715
+ FOR ANY INCIDENTAL, SPECIAL, OR CONSEQUENTIAL DAMAGES OR LOSS AS
716
+ A RESULT OF MODIFYING, DISTRIBUTING, OR OTHERWISE USING PYTHON,
717
+ OR ANY DERIVATIVE THEREOF, EVEN IF ADVISED OF THE POSSIBILITY THEREOF.
718
+
719
+ 6. This License Agreement will automatically terminate upon a material
720
+ breach of its terms and conditions.
721
+
722
+ 7. Nothing in this License Agreement shall be deemed to create any
723
+ relationship of agency, partnership, or joint venture between PSF and
724
+ Licensee. This License Agreement does not grant permission to use PSF
725
+ trademarks or trade name in a trademark sense to endorse or promote
726
+ products or services of Licensee, or any third party.
727
+
728
+ 8. By copying, installing or otherwise using Python, Licensee
729
+ agrees to be bound by the terms and conditions of this License
730
+ Agreement.
731
+
732
+
733
+ BEOPEN.COM LICENSE AGREEMENT FOR PYTHON 2.0
734
+ -------------------------------------------
735
+
736
+ BEOPEN PYTHON OPEN SOURCE LICENSE AGREEMENT VERSION 1
737
+
738
+ 1. This LICENSE AGREEMENT is between BeOpen.com ("BeOpen"), having an
739
+ office at 160 Saratoga Avenue, Santa Clara, CA 95051, and the
740
+ Individual or Organization ("Licensee") accessing and otherwise using
741
+ this software in source or binary form and its associated
742
+ documentation ("the Software").
743
+
744
+ 2. Subject to the terms and conditions of this BeOpen Python License
745
+ Agreement, BeOpen hereby grants Licensee a non-exclusive,
746
+ royalty-free, world-wide license to reproduce, analyze, test, perform
747
+ and/or display publicly, prepare derivative works, distribute, and
748
+ otherwise use the Software alone or in any derivative version,
749
+ provided, however, that the BeOpen Python License is retained in the
750
+ Software, alone or in any derivative version prepared by Licensee.
751
+
752
+ 3. BeOpen is making the Software available to Licensee on an "AS IS"
753
+ basis. BEOPEN MAKES NO REPRESENTATIONS OR WARRANTIES, EXPRESS OR
754
+ IMPLIED. BY WAY OF EXAMPLE, BUT NOT LIMITATION, BEOPEN MAKES NO AND
755
+ DISCLAIMS ANY REPRESENTATION OR WARRANTY OF MERCHANTABILITY OR FITNESS
756
+ FOR ANY PARTICULAR PURPOSE OR THAT THE USE OF THE SOFTWARE WILL NOT
757
+ INFRINGE ANY THIRD PARTY RIGHTS.
758
+
759
+ 4. BEOPEN SHALL NOT BE LIABLE TO LICENSEE OR ANY OTHER USERS OF THE
760
+ SOFTWARE FOR ANY INCIDENTAL, SPECIAL, OR CONSEQUENTIAL DAMAGES OR LOSS
761
+ AS A RESULT OF USING, MODIFYING OR DISTRIBUTING THE SOFTWARE, OR ANY
762
+ DERIVATIVE THEREOF, EVEN IF ADVISED OF THE POSSIBILITY THEREOF.
763
+
764
+ 5. This License Agreement will automatically terminate upon a material
765
+ breach of its terms and conditions.
766
+
767
+ 6. This License Agreement shall be governed by and interpreted in all
768
+ respects by the law of the State of California, excluding conflict of
769
+ law provisions. Nothing in this License Agreement shall be deemed to
770
+ create any relationship of agency, partnership, or joint venture
771
+ between BeOpen and Licensee. This License Agreement does not grant
772
+ permission to use BeOpen trademarks or trade names in a trademark
773
+ sense to endorse or promote products or services of Licensee, or any
774
+ third party. As an exception, the "BeOpen Python" logos available at
775
+ http://www.pythonlabs.com/logos.html may be used according to the
776
+ permissions granted on that web page.
777
+
778
+ 7. By copying, installing or otherwise using the software, Licensee
779
+ agrees to be bound by the terms and conditions of this License
780
+ Agreement.
781
+
782
+
783
+ CNRI LICENSE AGREEMENT FOR PYTHON 1.6.1
784
+ ---------------------------------------
785
+
786
+ 1. This LICENSE AGREEMENT is between the Corporation for National
787
+ Research Initiatives, having an office at 1895 Preston White Drive,
788
+ Reston, VA 20191 ("CNRI"), and the Individual or Organization
789
+ ("Licensee") accessing and otherwise using Python 1.6.1 software in
790
+ source or binary form and its associated documentation.
791
+
792
+ 2. Subject to the terms and conditions of this License Agreement, CNRI
793
+ hereby grants Licensee a nonexclusive, royalty-free, world-wide
794
+ license to reproduce, analyze, test, perform and/or display publicly,
795
+ prepare derivative works, distribute, and otherwise use Python 1.6.1
796
+ alone or in any derivative version, provided, however, that CNRI's
797
+ License Agreement and CNRI's notice of copyright, i.e., "Copyright (c)
798
+ 1995-2001 Corporation for National Research Initiatives; All Rights
799
+ Reserved" are retained in Python 1.6.1 alone or in any derivative
800
+ version prepared by Licensee. Alternately, in lieu of CNRI's License
801
+ Agreement, Licensee may substitute the following text (omitting the
802
+ quotes): "Python 1.6.1 is made available subject to the terms and
803
+ conditions in CNRI's License Agreement. This Agreement together with
804
+ Python 1.6.1 may be located on the internet using the following
805
+ unique, persistent identifier (known as a handle): 1895.22/1013. This
806
+ Agreement may also be obtained from a proxy server on the internet
807
+ using the following URL: http://hdl.handle.net/1895.22/1013".
808
+
809
+ 3. In the event Licensee prepares a derivative work that is based on
810
+ or incorporates Python 1.6.1 or any part thereof, and wants to make
811
+ the derivative work available to others as provided herein, then
812
+ Licensee hereby agrees to include in any such work a brief summary of
813
+ the changes made to Python 1.6.1.
814
+
815
+ 4. CNRI is making Python 1.6.1 available to Licensee on an "AS IS"
816
+ basis. CNRI MAKES NO REPRESENTATIONS OR WARRANTIES, EXPRESS OR
817
+ IMPLIED. BY WAY OF EXAMPLE, BUT NOT LIMITATION, CNRI MAKES NO AND
818
+ DISCLAIMS ANY REPRESENTATION OR WARRANTY OF MERCHANTABILITY OR FITNESS
819
+ FOR ANY PARTICULAR PURPOSE OR THAT THE USE OF PYTHON 1.6.1 WILL NOT
820
+ INFRINGE ANY THIRD PARTY RIGHTS.
821
+
822
+ 5. CNRI SHALL NOT BE LIABLE TO LICENSEE OR ANY OTHER USERS OF PYTHON
823
+ 1.6.1 FOR ANY INCIDENTAL, SPECIAL, OR CONSEQUENTIAL DAMAGES OR LOSS AS
824
+ A RESULT OF MODIFYING, DISTRIBUTING, OR OTHERWISE USING PYTHON 1.6.1,
825
+ OR ANY DERIVATIVE THEREOF, EVEN IF ADVISED OF THE POSSIBILITY THEREOF.
826
+
827
+ 6. This License Agreement will automatically terminate upon a material
828
+ breach of its terms and conditions.
829
+
830
+ 7. This License Agreement shall be governed by the federal
831
+ intellectual property law of the United States, including without
832
+ limitation the federal copyright law, and, to the extent such
833
+ U.S. federal law does not apply, by the law of the Commonwealth of
834
+ Virginia, excluding Virginia's conflict of law provisions.
835
+ Notwithstanding the foregoing, with regard to derivative works based
836
+ on Python 1.6.1 that incorporate non-separable material that was
837
+ previously distributed under the GNU General Public License (GPL), the
838
+ law of the Commonwealth of Virginia shall govern this License
839
+ Agreement only as to issues arising under or with respect to
840
+ Paragraphs 4, 5, and 7 of this License Agreement. Nothing in this
841
+ License Agreement shall be deemed to create any relationship of
842
+ agency, partnership, or joint venture between CNRI and Licensee. This
843
+ License Agreement does not grant permission to use CNRI trademarks or
844
+ trade name in a trademark sense to endorse or promote products or
845
+ services of Licensee, or any third party.
846
+
847
+ 8. By clicking on the "ACCEPT" button where indicated, or by copying,
848
+ installing or otherwise using Python 1.6.1, Licensee agrees to be
849
+ bound by the terms and conditions of this License Agreement.
850
+
851
+ ACCEPT
852
+
853
+
854
+ CWI LICENSE AGREEMENT FOR PYTHON 0.9.0 THROUGH 1.2
855
+ --------------------------------------------------
856
+
857
+ Copyright (c) 1991 - 1995, Stichting Mathematisch Centrum Amsterdam,
858
+ The Netherlands. All rights reserved.
859
+
860
+ Permission to use, copy, modify, and distribute this software and its
861
+ documentation for any purpose and without fee is hereby granted,
862
+ provided that the above copyright notice appear in all copies and that
863
+ both that copyright notice and this permission notice appear in
864
+ supporting documentation, and that the name of Stichting Mathematisch
865
+ Centrum or CWI not be used in advertising or publicity pertaining to
866
+ distribution of the software without specific, written prior
867
+ permission.
868
+
869
+ STICHTING MATHEMATISCH CENTRUM DISCLAIMS ALL WARRANTIES WITH REGARD TO
870
+ THIS SOFTWARE, INCLUDING ALL IMPLIED WARRANTIES OF MERCHANTABILITY AND
871
+ FITNESS, IN NO EVENT SHALL STICHTING MATHEMATISCH CENTRUM BE LIABLE
872
+ FOR ANY SPECIAL, INDIRECT OR CONSEQUENTIAL DAMAGES OR ANY DAMAGES
873
+ WHATSOEVER RESULTING FROM LOSS OF USE, DATA OR PROFITS, WHETHER IN AN
874
+ ACTION OF CONTRACT, NEGLIGENCE OR OTHER TORTIOUS ACTION, ARISING OUT
875
+ OF OR IN CONNECTION WITH THE USE OR PERFORMANCE OF THIS SOFTWARE.
876
+
877
+ ZERO-CLAUSE BSD LICENSE FOR CODE IN THE PYTHON DOCUMENTATION
878
+ ----------------------------------------------------------------------
879
+
880
+ Permission to use, copy, modify, and/or distribute this software for any
881
+ purpose with or without fee is hereby granted.
882
+
883
+ THE SOFTWARE IS PROVIDED "AS IS" AND THE AUTHOR DISCLAIMS ALL WARRANTIES WITH
884
+ REGARD TO THIS SOFTWARE INCLUDING ALL IMPLIED WARRANTIES OF MERCHANTABILITY
885
+ AND FITNESS. IN NO EVENT SHALL THE AUTHOR BE LIABLE FOR ANY SPECIAL, DIRECT,
886
+ INDIRECT, OR CONSEQUENTIAL DAMAGES OR ANY DAMAGES WHATSOEVER RESULTING FROM
887
+ LOSS OF USE, DATA OR PROFITS, WHETHER IN AN ACTION OF CONTRACT, NEGLIGENCE OR
888
+ OTHER TORTIOUS ACTION, ARISING OUT OF OR IN CONNECTION WITH THE USE OR
889
+ PERFORMANCE OF THIS SOFTWARE.
890
+ Copyright (c) 2014, Al Sweigart
891
+ All rights reserved.
892
+
893
+ Redistribution and use in source and binary forms, with or without
894
+ modification, are permitted provided that the following conditions are met:
895
+
896
+ * Redistributions of source code must retain the above copyright notice, this
897
+ list of conditions and the following disclaimer.
898
+
899
+ * Redistributions in binary form must reproduce the above copyright notice,
900
+ this list of conditions and the following disclaimer in the documentation
901
+ and/or other materials provided with the distribution.
902
+
903
+ * Neither the name of the {organization} nor the names of its
904
+ contributors may be used to endorse or promote products derived from
905
+ this software without specific prior written permission.
906
+
907
+ THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS"
908
+ AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE
909
+ IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE ARE
910
+ DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT HOLDER OR CONTRIBUTORS BE LIABLE
911
+ FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL
912
+ DAMAGES (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF SUBSTITUTE GOODS OR
913
+ SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER
914
+ CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY,
915
+ OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE
916
+ OF THIS SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.Copyright (c) 2017 Anthony Sottile
917
+
918
+ Permission is hereby granted, free of charge, to any person obtaining a copy
919
+ of this software and associated documentation files (the "Software"), to deal
920
+ in the Software without restriction, including without limitation the rights
921
+ to use, copy, modify, merge, publish, distribute, sublicense, and/or sell
922
+ copies of the Software, and to permit persons to whom the Software is
923
+ furnished to do so, subject to the following conditions:
924
+
925
+ The above copyright notice and this permission notice shall be included in
926
+ all copies or substantial portions of the Software.
927
+
928
+ THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR
929
+ IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,
930
+ FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE
931
+ AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER
932
+ LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM,
933
+ OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN
934
+ THE SOFTWARE.Copyright (c) 2015-2019 Jared Hobbs
935
+
936
+ Permission is hereby granted, free of charge, to any person obtaining a copy of
937
+ this software and associated documentation files (the "Software"), to deal in
938
+ the Software without restriction, including without limitation the rights to
939
+ use, copy, modify, merge, publish, distribute, sublicense, and/or sell copies
940
+ of the Software, and to permit persons to whom the Software is furnished to do
941
+ so, subject to the following conditions:
942
+
943
+ The above copyright notice and this permission notice shall be included in all
944
+ copies or substantial portions of the Software.
945
+
946
+ THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR
947
+ IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,
948
+ FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE
949
+ AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER
950
+ LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM,
951
+ OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE
952
+ SOFTWARE.Developed by ESN, an Electronic Arts Inc. studio.
953
+ Copyright (c) 2014, Electronic Arts Inc.
954
+ All rights reserved.
955
+
956
+ Redistribution and use in source and binary forms, with or without
957
+ modification, are permitted provided that the following conditions are met:
958
+ * Redistributions of source code must retain the above copyright
959
+ notice, this list of conditions and the following disclaimer.
960
+ * Redistributions in binary form must reproduce the above copyright
961
+ notice, this list of conditions and the following disclaimer in the
962
+ documentation and/or other materials provided with the distribution.
963
+ * Neither the name of ESN, Electronic Arts Inc. nor the
964
+ names of its contributors may be used to endorse or promote products
965
+ derived from this software without specific prior written permission.
966
+
967
+ THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS" AND
968
+ ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE IMPLIED
969
+ WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE ARE
970
+ DISCLAIMED. IN NO EVENT SHALL ELECTRONIC ARTS INC. BE LIABLE
971
+ FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL DAMAGES
972
+ (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES;
973
+ LOSS OF USE, DATA, OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND
974
+ ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT
975
+ (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS
976
+ SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
977
+
978
+ ----
979
+
980
+ Portions of code from MODP_ASCII - Ascii transformations (upper/lower, etc)
981
+ https://github.com/client9/stringencoders
982
+
983
+ Copyright 2005, 2006, 2007
984
+ Nick Galbreath -- nickg [at] modp [dot] com
985
+ All rights reserved.
986
+
987
+ Redistribution and use in source and binary forms, with or without
988
+ modification, are permitted provided that the following conditions are
989
+ met:
990
+
991
+ Redistributions of source code must retain the above copyright
992
+ notice, this list of conditions and the following disclaimer.
993
+
994
+ Redistributions in binary form must reproduce the above copyright
995
+ notice, this list of conditions and the following disclaimer in the
996
+ documentation and/or other materials provided with the distribution.
997
+
998
+ Neither the name of the modp.com nor the names of its
999
+ contributors may be used to endorse or promote products derived from
1000
+ this software without specific prior written permission.
1001
+
1002
+ THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS
1003
+ "AS IS" AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT
1004
+ LIMITED TO, THE IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR
1005
+ A PARTICULAR PURPOSE ARE DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT
1006
+ OWNER OR CONTRIBUTORS BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL,
1007
+ SPECIAL, EXEMPLARY, OR CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT
1008
+ LIMITED TO, PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES; LOSS OF USE,
1009
+ DATA, OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON ANY
1010
+ THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT
1011
+ (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE
1012
+ OF THIS SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
1013
+
1014
+ This is the standard "new" BSD license:
1015
+ http://www.opensource.org/licenses/bsd-license.php
1016
+
1017
+ https://github.com/client9/stringencoders/blob/cfd5c1507325ae497ea9bacdacba12c0ffd79d30/COPYING
1018
+
1019
+ ----
1020
+
1021
+ Numeric decoder derived from from TCL library
1022
+ https://opensource.apple.com/source/tcl/tcl-14/tcl/license.terms
1023
+ * Copyright (c) 1988-1993 The Regents of the University of California.
1024
+ * Copyright (c) 1994 Sun Microsystems, Inc.
1025
+
1026
+ This software is copyrighted by the Regents of the University of
1027
+ California, Sun Microsystems, Inc., Scriptics Corporation, ActiveState
1028
+ Corporation and other parties. The following terms apply to all files
1029
+ associated with the software unless explicitly disclaimed in
1030
+ individual files.
1031
+
1032
+ The authors hereby grant permission to use, copy, modify, distribute,
1033
+ and license this software and its documentation for any purpose, provided
1034
+ that existing copyright notices are retained in all copies and that this
1035
+ notice is included verbatim in any distributions. No written agreement,
1036
+ license, or royalty fee is required for any of the authorized uses.
1037
+ Modifications to this software may be copyrighted by their authors
1038
+ and need not follow the licensing terms described here, provided that
1039
+ the new terms are clearly indicated on the first page of each file where
1040
+ they apply.
1041
+
1042
+ IN NO EVENT SHALL THE AUTHORS OR DISTRIBUTORS BE LIABLE TO ANY PARTY
1043
+ FOR DIRECT, INDIRECT, SPECIAL, INCIDENTAL, OR CONSEQUENTIAL DAMAGES
1044
+ ARISING OUT OF THE USE OF THIS SOFTWARE, ITS DOCUMENTATION, OR ANY
1045
+ DERIVATIVES THEREOF, EVEN IF THE AUTHORS HAVE BEEN ADVISED OF THE
1046
+ POSSIBILITY OF SUCH DAMAGE.
1047
+
1048
+ THE AUTHORS AND DISTRIBUTORS SPECIFICALLY DISCLAIM ANY WARRANTIES,
1049
+ INCLUDING, BUT NOT LIMITED TO, THE IMPLIED WARRANTIES OF MERCHANTABILITY,
1050
+ FITNESS FOR A PARTICULAR PURPOSE, AND NON-INFRINGEMENT. THIS SOFTWARE
1051
+ IS PROVIDED ON AN "AS IS" BASIS, AND THE AUTHORS AND DISTRIBUTORS HAVE
1052
+ NO OBLIGATION TO PROVIDE MAINTENANCE, SUPPORT, UPDATES, ENHANCEMENTS, OR
1053
+ MODIFICATIONS.
1054
+
1055
+ GOVERNMENT USE: If you are acquiring this software on behalf of the
1056
+ U.S. government, the Government shall have only "Restricted Rights"
1057
+ in the software and related documentation as defined in the Federal
1058
+ Acquisition Regulations (FARs) in Clause 52.227.19 (c) (2). If you
1059
+ are acquiring the software on behalf of the Department of Defense, the
1060
+ software shall be classified as "Commercial Computer Software" and the
1061
+ Government shall have only "Restricted Rights" as defined in Clause
1062
+ 252.227-7013 (c) (1) of DFARs. Notwithstanding the foregoing, the
1063
+ authors grant the U.S. Government and others acting in its behalf
1064
+ permission to use and distribute the software in accordance with the
1065
+ terms specified in this license.
1066
+ Classifier: Development Status :: 5 - Production/Stable
1067
+ Classifier: Environment :: Console
1068
+ Classifier: Intended Audience :: Science/Research
1069
+ Classifier: License :: OSI Approved :: BSD License
1070
+ Classifier: Operating System :: OS Independent
1071
+ Classifier: Programming Language :: Cython
1072
+ Classifier: Programming Language :: Python
1073
+ Classifier: Programming Language :: Python :: 3
1074
+ Classifier: Programming Language :: Python :: 3 :: Only
1075
+ Classifier: Programming Language :: Python :: 3.11
1076
+ Classifier: Programming Language :: Python :: 3.12
1077
+ Classifier: Programming Language :: Python :: 3.13
1078
+ Classifier: Programming Language :: Python :: 3.14
1079
+ Classifier: Topic :: Scientific/Engineering
1080
+ Project-URL: homepage, https://pandas.pydata.org
1081
+ Project-URL: documentation, https://pandas.pydata.org/docs/
1082
+ Project-URL: repository, https://github.com/pandas-dev/pandas
1083
+ Requires-Python: >=3.11
1084
+ Requires-Dist: numpy>=1.26.0; python_version < "3.14"
1085
+ Requires-Dist: numpy>=2.3.3; python_version >= "3.14"
1086
+ Requires-Dist: python-dateutil>=2.8.2
1087
+ Requires-Dist: tzdata; sys_platform == "win32"
1088
+ Requires-Dist: tzdata; sys_platform == "emscripten"
1089
+ Provides-Extra: test
1090
+ Requires-Dist: hypothesis>=6.116.0; extra == "test"
1091
+ Requires-Dist: pytest<9.1,>=8.3.4; extra == "test"
1092
+ Requires-Dist: pytest-xdist>=3.6.1; extra == "test"
1093
+ Provides-Extra: pyarrow
1094
+ Requires-Dist: pyarrow>=13.0.0; extra == "pyarrow"
1095
+ Provides-Extra: performance
1096
+ Requires-Dist: bottleneck>=1.4.2; extra == "performance"
1097
+ Requires-Dist: numba>=0.60.0; extra == "performance"
1098
+ Requires-Dist: numexpr>=2.10.2; extra == "performance"
1099
+ Provides-Extra: computation
1100
+ Requires-Dist: scipy>=1.14.1; extra == "computation"
1101
+ Requires-Dist: xarray>=2024.10.0; extra == "computation"
1102
+ Provides-Extra: fss
1103
+ Requires-Dist: fsspec>=2024.10.0; extra == "fss"
1104
+ Provides-Extra: aws
1105
+ Requires-Dist: s3fs>=2024.10.0; extra == "aws"
1106
+ Provides-Extra: gcp
1107
+ Requires-Dist: gcsfs>=2024.10.0; extra == "gcp"
1108
+ Provides-Extra: excel
1109
+ Requires-Dist: odfpy>=1.4.1; extra == "excel"
1110
+ Requires-Dist: openpyxl>=3.1.5; extra == "excel"
1111
+ Requires-Dist: python-calamine>=0.3.0; extra == "excel"
1112
+ Requires-Dist: pyxlsb>=1.0.10; extra == "excel"
1113
+ Requires-Dist: xlrd>=2.0.1; extra == "excel"
1114
+ Requires-Dist: xlsxwriter>=3.2.0; extra == "excel"
1115
+ Provides-Extra: parquet
1116
+ Requires-Dist: pyarrow>=13.0.0; extra == "parquet"
1117
+ Provides-Extra: feather
1118
+ Requires-Dist: pyarrow>=13.0.0; extra == "feather"
1119
+ Provides-Extra: iceberg
1120
+ Requires-Dist: pyiceberg>=0.8.1; extra == "iceberg"
1121
+ Provides-Extra: hdf5
1122
+ Requires-Dist: tables>=3.10.1; extra == "hdf5"
1123
+ Provides-Extra: spss
1124
+ Requires-Dist: pyreadstat>=1.2.8; extra == "spss"
1125
+ Provides-Extra: postgresql
1126
+ Requires-Dist: SQLAlchemy>=2.0.36; extra == "postgresql"
1127
+ Requires-Dist: psycopg2>=2.9.10; extra == "postgresql"
1128
+ Requires-Dist: adbc-driver-postgresql>=1.2.0; extra == "postgresql"
1129
+ Provides-Extra: mysql
1130
+ Requires-Dist: SQLAlchemy>=2.0.36; extra == "mysql"
1131
+ Requires-Dist: pymysql>=1.1.1; extra == "mysql"
1132
+ Provides-Extra: sql-other
1133
+ Requires-Dist: SQLAlchemy>=2.0.36; extra == "sql-other"
1134
+ Requires-Dist: adbc-driver-postgresql>=1.2.0; extra == "sql-other"
1135
+ Requires-Dist: adbc-driver-sqlite>=1.2.0; extra == "sql-other"
1136
+ Provides-Extra: html
1137
+ Requires-Dist: beautifulsoup4>=4.12.3; extra == "html"
1138
+ Requires-Dist: html5lib>=1.1; extra == "html"
1139
+ Requires-Dist: lxml>=5.3.0; extra == "html"
1140
+ Provides-Extra: xml
1141
+ Requires-Dist: lxml>=5.3.0; extra == "xml"
1142
+ Provides-Extra: plot
1143
+ Requires-Dist: matplotlib>=3.9.3; extra == "plot"
1144
+ Provides-Extra: output-formatting
1145
+ Requires-Dist: jinja2>=3.1.5; extra == "output-formatting"
1146
+ Requires-Dist: tabulate>=0.9.0; extra == "output-formatting"
1147
+ Provides-Extra: clipboard
1148
+ Requires-Dist: PyQt5>=5.15.9; extra == "clipboard"
1149
+ Requires-Dist: qtpy>=2.4.2; extra == "clipboard"
1150
+ Provides-Extra: compression
1151
+ Requires-Dist: zstandard>=0.23.0; extra == "compression"
1152
+ Provides-Extra: timezone
1153
+ Requires-Dist: pytz>=2020.1; extra == "timezone"
1154
+ Provides-Extra: all
1155
+ Requires-Dist: adbc-driver-postgresql>=1.2.0; extra == "all"
1156
+ Requires-Dist: adbc-driver-sqlite>=1.2.0; extra == "all"
1157
+ Requires-Dist: beautifulsoup4>=4.12.3; extra == "all"
1158
+ Requires-Dist: bottleneck>=1.4.2; extra == "all"
1159
+ Requires-Dist: fastparquet>=2024.11.0; extra == "all"
1160
+ Requires-Dist: fsspec>=2024.10.0; extra == "all"
1161
+ Requires-Dist: gcsfs>=2024.10.0; extra == "all"
1162
+ Requires-Dist: html5lib>=1.1; extra == "all"
1163
+ Requires-Dist: hypothesis>=6.116.0; extra == "all"
1164
+ Requires-Dist: jinja2>=3.1.5; extra == "all"
1165
+ Requires-Dist: lxml>=5.3.0; extra == "all"
1166
+ Requires-Dist: matplotlib>=3.9.3; extra == "all"
1167
+ Requires-Dist: numba>=0.60.0; extra == "all"
1168
+ Requires-Dist: numexpr>=2.10.2; extra == "all"
1169
+ Requires-Dist: odfpy>=1.4.1; extra == "all"
1170
+ Requires-Dist: openpyxl>=3.1.5; extra == "all"
1171
+ Requires-Dist: psycopg2>=2.9.10; extra == "all"
1172
+ Requires-Dist: pyarrow>=13.0.0; extra == "all"
1173
+ Requires-Dist: pyiceberg>=0.8.1; extra == "all"
1174
+ Requires-Dist: pymysql>=1.1.1; extra == "all"
1175
+ Requires-Dist: PyQt5>=5.15.9; extra == "all"
1176
+ Requires-Dist: pyreadstat>=1.2.8; extra == "all"
1177
+ Requires-Dist: pytest>=8.3.4; extra == "all"
1178
+ Requires-Dist: pytest-xdist>=3.6.1; extra == "all"
1179
+ Requires-Dist: python-calamine>=0.3.0; extra == "all"
1180
+ Requires-Dist: pytz>=2020.1; extra == "all"
1181
+ Requires-Dist: pyxlsb>=1.0.10; extra == "all"
1182
+ Requires-Dist: qtpy>=2.4.2; extra == "all"
1183
+ Requires-Dist: scipy>=1.14.1; extra == "all"
1184
+ Requires-Dist: s3fs>=2024.10.0; extra == "all"
1185
+ Requires-Dist: SQLAlchemy>=2.0.36; extra == "all"
1186
+ Requires-Dist: tables>=3.10.1; extra == "all"
1187
+ Requires-Dist: tabulate>=0.9.0; extra == "all"
1188
+ Requires-Dist: xarray>=2024.10.0; extra == "all"
1189
+ Requires-Dist: xlrd>=2.0.1; extra == "all"
1190
+ Requires-Dist: xlsxwriter>=3.2.0; extra == "all"
1191
+ Requires-Dist: zstandard>=0.23.0; extra == "all"
1192
+ Description-Content-Type: text/markdown
1193
+
1194
+ <picture align="center">
1195
+ <source media="(prefers-color-scheme: dark)" srcset="https://pandas.pydata.org/static/img/pandas_white.svg">
1196
+ <img alt="Pandas Logo" src="https://pandas.pydata.org/static/img/pandas.svg">
1197
+ </picture>
1198
+
1199
+ -----------------
1200
+
1201
+ # pandas: A Powerful Python Data Analysis Toolkit
1202
+
1203
+ | | |
1204
+ | --- | --- |
1205
+ | Testing | [![CI - Test](https://github.com/pandas-dev/pandas/actions/workflows/unit-tests.yml/badge.svg)](https://github.com/pandas-dev/pandas/actions/workflows/unit-tests.yml) [![Coverage](https://codecov.io/github/pandas-dev/pandas/coverage.svg?branch=main)](https://codecov.io/gh/pandas-dev/pandas) |
1206
+ | Package | [![PyPI Latest Release](https://img.shields.io/pypi/v/pandas.svg)](https://pypi.org/project/pandas/) [![PyPI Downloads](https://img.shields.io/pypi/dm/pandas.svg?label=PyPI%20downloads)](https://pypi.org/project/pandas/) [![Conda Latest Release](https://anaconda.org/conda-forge/pandas/badges/version.svg)](https://anaconda.org/conda-forge/pandas) [![Conda Downloads](https://img.shields.io/conda/dn/conda-forge/pandas.svg?label=Conda%20downloads)](https://anaconda.org/conda-forge/pandas) |
1207
+ | Meta | [![Powered by NumFOCUS](https://img.shields.io/badge/powered%20by-NumFOCUS-orange.svg?style=flat&colorA=E1523D&colorB=007D8A)](https://numfocus.org) [![DOI](https://zenodo.org/badge/DOI/10.5281/zenodo.3509134.svg)](https://doi.org/10.5281/zenodo.3509134) [![License - BSD 3-Clause](https://img.shields.io/pypi/l/pandas.svg)](https://github.com/pandas-dev/pandas/blob/main/LICENSE) [![Slack](https://img.shields.io/badge/join_Slack-information-brightgreen.svg?logo=slack)](https://pandas.pydata.org/docs/dev/development/community.html?highlight=slack#community-slack) [![LFX Health Score](https://insights.linuxfoundation.org/api/badge/health-score?project=pandas-dev-pandas)](https://insights.linuxfoundation.org/project/pandas-dev-pandas) |
1208
+
1209
+
1210
+ ## What is it?
1211
+
1212
+ **pandas** is a Python package that provides fast, flexible, and expressive data
1213
+ structures designed to make working with "relational" or "labeled" data both
1214
+ easy and intuitive. It aims to be the fundamental high-level building block for
1215
+ doing practical, **real-world** data analysis in Python. Additionally, it has
1216
+ the broader goal of becoming **the most powerful and flexible open-source data
1217
+ analysis/manipulation tool available in any language**. It is already well on
1218
+ its way towards this goal.
1219
+
1220
+ ## Table of Contents
1221
+
1222
+ - [Main Features](#main-features)
1223
+ - [Where to get it](#where-to-get-it)
1224
+ - [Dependencies](#dependencies)
1225
+ - [Installation from sources](#installation-from-sources)
1226
+ - [License](#license)
1227
+ - [Documentation](#documentation)
1228
+ - [Background](#background)
1229
+ - [Getting Help](#getting-help)
1230
+ - [Discussion and Development](#discussion-and-development)
1231
+ - [Contributing to pandas](#contributing-to-pandas)
1232
+
1233
+ ## Main Features
1234
+ Here are just a few of the things that pandas does well:
1235
+
1236
+ - Easy handling of [**missing data**][missing-data] (represented as
1237
+ `NaN`, `NA`, or `NaT`) in floating point as well as non-floating point data
1238
+ - Size mutability: columns can be [**inserted and
1239
+ deleted**][insertion-deletion] from DataFrame and higher dimensional
1240
+ objects
1241
+ - Automatic and explicit [**data alignment**][alignment]: objects can
1242
+ be explicitly aligned to a set of labels, or the user can simply
1243
+ ignore the labels and let `Series`, `DataFrame`, etc. automatically
1244
+ align the data for you in computations
1245
+ - Powerful, flexible [**group by**][groupby] functionality to perform
1246
+ split-apply-combine operations on data sets, for both aggregating
1247
+ and transforming data
1248
+ - Make it [**easy to convert**][conversion] ragged,
1249
+ differently-indexed data in other Python and NumPy data structures
1250
+ into DataFrame objects
1251
+ - Intelligent label-based [**slicing**][slicing], [**fancy
1252
+ indexing**][fancy-indexing], and [**subsetting**][subsetting] of
1253
+ large data sets
1254
+ - Intuitive [**merging**][merging] and [**joining**][joining] data
1255
+ sets
1256
+ - Flexible [**reshaping**][reshape] and [**pivoting**][pivot-table] of
1257
+ data sets
1258
+ - [**Hierarchical**][mi] labeling of axes (possible to have multiple
1259
+ labels per tick)
1260
+ - Robust I/O tools for loading data from [**flat files**][flat-files]
1261
+ (CSV and delimited), [**Excel files**][excel], [**databases**][db],
1262
+ and saving/loading data from the ultrafast [**HDF5 format**][hdfstore]
1263
+ - [**Time series**][timeseries]-specific functionality: date range
1264
+ generation and frequency conversion, moving window statistics,
1265
+ date shifting and lagging
1266
+
1267
+
1268
+ [missing-data]: https://pandas.pydata.org/pandas-docs/stable/user_guide/missing_data.html
1269
+ [insertion-deletion]: https://pandas.pydata.org/pandas-docs/stable/user_guide/dsintro.html#column-selection-addition-deletion
1270
+ [alignment]: https://pandas.pydata.org/pandas-docs/stable/user_guide/dsintro.html?highlight=alignment#intro-to-data-structures
1271
+ [groupby]: https://pandas.pydata.org/pandas-docs/stable/user_guide/groupby.html#group-by-split-apply-combine
1272
+ [conversion]: https://pandas.pydata.org/pandas-docs/stable/user_guide/dsintro.html#dataframe
1273
+ [slicing]: https://pandas.pydata.org/pandas-docs/stable/user_guide/indexing.html#slicing-ranges
1274
+ [fancy-indexing]: https://pandas.pydata.org/pandas-docs/stable/user_guide/advanced.html#advanced
1275
+ [subsetting]: https://pandas.pydata.org/pandas-docs/stable/user_guide/indexing.html#boolean-indexing
1276
+ [merging]: https://pandas.pydata.org/pandas-docs/stable/user_guide/merging.html#database-style-dataframe-or-named-series-joining-merging
1277
+ [joining]: https://pandas.pydata.org/pandas-docs/stable/user_guide/merging.html#joining-on-index
1278
+ [reshape]: https://pandas.pydata.org/pandas-docs/stable/user_guide/reshaping.html
1279
+ [pivot-table]: https://pandas.pydata.org/pandas-docs/stable/user_guide/reshaping.html
1280
+ [mi]: https://pandas.pydata.org/pandas-docs/stable/user_guide/indexing.html#hierarchical-indexing-multiindex
1281
+ [flat-files]: https://pandas.pydata.org/pandas-docs/stable/user_guide/io.html#csv-text-files
1282
+ [excel]: https://pandas.pydata.org/pandas-docs/stable/user_guide/io.html#excel-files
1283
+ [db]: https://pandas.pydata.org/pandas-docs/stable/user_guide/io.html#sql-queries
1284
+ [hdfstore]: https://pandas.pydata.org/pandas-docs/stable/user_guide/io.html#hdf5-pytables
1285
+ [timeseries]: https://pandas.pydata.org/pandas-docs/stable/user_guide/timeseries.html#time-series-date-functionality
1286
+
1287
+ ## Where to get it
1288
+ The source code is currently hosted on GitHub at:
1289
+ https://github.com/pandas-dev/pandas
1290
+
1291
+ Binary installers for the latest released version are available at the [Python
1292
+ Package Index (PyPI)](https://pypi.org/project/pandas) and on [Conda](https://anaconda.org/conda-forge/pandas).
1293
+
1294
+ ```sh
1295
+ # conda
1296
+ conda install -c conda-forge pandas
1297
+ ```
1298
+
1299
+ ```sh
1300
+ # or PyPI
1301
+ pip install pandas
1302
+ ```
1303
+
1304
+ The list of changes to pandas between each release can be found
1305
+ [here](https://pandas.pydata.org/pandas-docs/stable/whatsnew/index.html). For full
1306
+ details, see the commit logs at https://github.com/pandas-dev/pandas.
1307
+
1308
+ ## Dependencies
1309
+ - [NumPy - Adds support for large, multi-dimensional arrays, matrices and high-level mathematical functions to operate on these arrays](https://www.numpy.org)
1310
+ - [python-dateutil - Provides powerful extensions to the standard datetime module](https://dateutil.readthedocs.io/en/stable/index.html)
1311
+ - [tzdata - Provides an IANA time zone database](https://tzdata.readthedocs.io/en/latest/) (Only required on Windows/Emscripten)
1312
+
1313
+ See the [full installation instructions](https://pandas.pydata.org/pandas-docs/stable/install.html#dependencies) for minimum supported versions of required, recommended and optional dependencies.
1314
+
1315
+ ## Installation from sources
1316
+ To install pandas from source you need [Cython](https://cython.org/) in addition to the normal
1317
+ dependencies above. Cython can be installed from PyPI:
1318
+
1319
+ ```sh
1320
+ pip install cython
1321
+ ```
1322
+
1323
+ In the `pandas` directory (same one where you found this file after
1324
+ cloning the git repo), execute:
1325
+
1326
+ ```sh
1327
+ pip install .
1328
+ ```
1329
+
1330
+ or for installing in [development mode](https://pip.pypa.io/en/latest/cli/pip_install/#install-editable):
1331
+
1332
+
1333
+ ```sh
1334
+ python -m pip install -ve . --no-build-isolation --config-settings editable-verbose=true
1335
+ ```
1336
+
1337
+ See the full instructions for [installing from source](https://pandas.pydata.org/docs/dev/development/contributing_environment.html).
1338
+
1339
+ ## License
1340
+ [BSD 3](LICENSE)
1341
+
1342
+ ## Documentation
1343
+ The official documentation is hosted on [PyData.org](https://pandas.pydata.org/pandas-docs/stable/).
1344
+
1345
+ ## Background
1346
+ Work on ``pandas`` started at [AQR](https://www.aqr.com/) (a quantitative hedge fund) in 2008 and
1347
+ has been under active development since then.
1348
+
1349
+ ## Getting Help
1350
+
1351
+ For usage questions, the best place to go to is [Stack Overflow](https://stackoverflow.com/questions/tagged/pandas).
1352
+ Further, general questions and discussions can also take place on the [pydata mailing list](https://groups.google.com/forum/?fromgroups#!forum/pydata).
1353
+
1354
+ ## Discussion and Development
1355
+ Most development discussions take place on GitHub in this repo, via the [GitHub issue tracker](https://github.com/pandas-dev/pandas/issues).
1356
+
1357
+ Further, the [pandas-dev mailing list](https://mail.python.org/mailman/listinfo/pandas-dev) can also be used for specialized discussions or design issues, and a [Slack channel](https://pandas.pydata.org/docs/dev/development/community.html?highlight=slack#community-slack) is available for quick development related questions.
1358
+
1359
+ There are also frequent [community meetings](https://pandas.pydata.org/docs/dev/development/community.html#community-meeting) for project maintainers open to the community as well as monthly [new contributor meetings](https://pandas.pydata.org/docs/dev/development/community.html#new-contributor-meeting) to help support new contributors.
1360
+
1361
+ Additional information on the communication channels can be found on the [contributor community](https://pandas.pydata.org/docs/development/community.html) page.
1362
+
1363
+ ## Contributing to pandas
1364
+
1365
+ [![Open Source Helpers](https://www.codetriage.com/pandas-dev/pandas/badges/users.svg)](https://www.codetriage.com/pandas-dev/pandas)
1366
+
1367
+ All contributions, bug reports, bug fixes, documentation improvements, enhancements, and ideas are welcome.
1368
+
1369
+ A detailed overview on how to contribute can be found in the **[contributing guide](https://pandas.pydata.org/docs/dev/development/contributing.html)**.
1370
+
1371
+ If you are simply looking to start working with the pandas codebase, navigate to the [GitHub "issues" tab](https://github.com/pandas-dev/pandas/issues) and start looking through interesting issues. There are a number of issues listed under [Docs](https://github.com/pandas-dev/pandas/issues?q=is%3Aissue%20state%3Aopen%20label%3ADocs%20sort%3Aupdated-desc) and [good first issue](https://github.com/pandas-dev/pandas/issues?q=is%3Aissue%20state%3Aopen%20label%3A%22good%20first%20issue%22%20sort%3Aupdated-desc) where you could start out.
1372
+
1373
+ You can also triage issues which may include reproducing bug reports, or asking for vital information such as version numbers or reproduction instructions. If you would like to start triaging issues, one easy way to get started is to [subscribe to pandas on CodeTriage](https://www.codetriage.com/pandas-dev/pandas).
1374
+
1375
+ Or maybe through using pandas you have an idea of your own or are looking for something in the documentation and thinking ‘this can be improved’... you can do something about it!
1376
+
1377
+ Feel free to ask questions on the [mailing list](https://groups.google.com/forum/?fromgroups#!forum/pydata) or on [Slack](https://pandas.pydata.org/docs/dev/development/community.html?highlight=slack#community-slack).
1378
+
1379
+ As contributors and maintainers to this project, you are expected to abide by pandas' code of conduct. More information can be found at: [Contributor Code of Conduct](https://github.com/pandas-dev/.github/blob/master/CODE_OF_CONDUCT.md)
1380
+
1381
+ <hr>
1382
+
1383
+ [Go to Top](#table-of-contents)
.cache/pip/http-v2/4/5/2/4/1/45241d61b1606b84c3825a9119b750e7cd16e5fac504d31f79203a8e.body ADDED
@@ -0,0 +1,84 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ Metadata-Version: 2.4
2
+ Name: click
3
+ Version: 8.4.2
4
+ Summary: Composable command line interface toolkit
5
+ Maintainer-email: Pallets <contact@palletsprojects.com>
6
+ Requires-Python: >=3.10
7
+ Description-Content-Type: text/markdown
8
+ License-Expression: BSD-3-Clause
9
+ Classifier: Development Status :: 5 - Production/Stable
10
+ Classifier: Intended Audience :: Developers
11
+ Classifier: Operating System :: OS Independent
12
+ Classifier: Programming Language :: Python
13
+ Classifier: Typing :: Typed
14
+ License-File: LICENSE.txt
15
+ Requires-Dist: colorama; platform_system == 'Windows'
16
+ Project-URL: Changes, https://click.palletsprojects.com/page/changes/
17
+ Project-URL: Chat, https://discord.gg/pallets
18
+ Project-URL: Documentation, https://click.palletsprojects.com/
19
+ Project-URL: Donate, https://palletsprojects.com/donate
20
+ Project-URL: Source, https://github.com/pallets/click/
21
+
22
+ <div align="center"><img src="https://raw.githubusercontent.com/pallets/click/refs/heads/stable/docs/_static/click-name.svg" alt="" height="150"></div>
23
+
24
+ # Click
25
+
26
+ Click is a Python package for creating beautiful command line interfaces
27
+ in a composable way with as little code as necessary. It's the "Command
28
+ Line Interface Creation Kit". It's highly configurable but comes with
29
+ sensible defaults out of the box.
30
+
31
+ It aims to make the process of writing command line tools quick and fun
32
+ while also preventing any frustration caused by the inability to
33
+ implement an intended CLI API.
34
+
35
+ Click in three points:
36
+
37
+ - Arbitrary nesting of commands
38
+ - Automatic help page generation
39
+ - Supports lazy loading of subcommands at runtime
40
+
41
+
42
+ ## A Simple Example
43
+
44
+ ```python
45
+ import click
46
+
47
+ @click.command()
48
+ @click.option("--count", default=1, help="Number of greetings.")
49
+ @click.option("--name", prompt="Your name", help="The person to greet.")
50
+ def hello(count, name):
51
+ """Simple program that greets NAME for a total of COUNT times."""
52
+ for _ in range(count):
53
+ click.echo(f"Hello, {name}!")
54
+
55
+ if __name__ == '__main__':
56
+ hello()
57
+ ```
58
+
59
+ ```
60
+ $ python hello.py --count=3
61
+ Your name: Click
62
+ Hello, Click!
63
+ Hello, Click!
64
+ Hello, Click!
65
+ ```
66
+
67
+
68
+ ## Donate
69
+
70
+ The Pallets organization develops and supports Click and other popular
71
+ packages. In order to grow the community of contributors and users, and
72
+ allow the maintainers to devote more time to the projects, [please
73
+ donate today][].
74
+
75
+ [please donate today]: https://palletsprojects.com/donate
76
+
77
+ ## Contributing
78
+
79
+ See our [detailed contributing documentation][contrib] for many ways to
80
+ contribute, including reporting issues, requesting features, asking or answering
81
+ questions, and making PRs.
82
+
83
+ [contrib]: https://palletsprojects.com/contributing/
84
+
.cache/pip/http-v2/4/7/a/1/f/47a1fcfcda9889c5e9fc07f976129358dec689ce97437905232762a1.body ADDED
Binary file (80.2 kB). View file
 
.cache/pip/http-v2/4/a/5/b/6/4a5b6f0d76201de4cfd4884f5e95617a1848cf81c8357be4d12cbf6a ADDED
Binary file (1.28 kB). View file
 
.cache/pip/http-v2/4/d/c/8/d/4dc8d567db4bc55c0684404c85a6b4572f87a99306be24cab65fbfae ADDED
Binary file (1.89 kB). View file
 
.cache/pip/http-v2/4/d/c/8/d/4dc8d567db4bc55c0684404c85a6b4572f87a99306be24cab65fbfae.body ADDED
Binary file (16.7 kB). View file
 
.cache/pip/http-v2/6/4/6/7/b/6467bdd236eabb4648139f514441e5510842fbc90755e4738c64fcf3.body ADDED
@@ -0,0 +1,341 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ Metadata-Version: 2.4
2
+ Name: colorlog
3
+ Version: 6.12.0
4
+ Summary: Add colours to the output of Python's logging module.
5
+ Home-page: https://github.com/borntyping/python-colorlog
6
+ Author: Sam Clements
7
+ Author-email: sam@borntyping.co.uk
8
+ License: MIT License
9
+ Classifier: Development Status :: 5 - Production/Stable
10
+ Classifier: Environment :: Console
11
+ Classifier: Intended Audience :: Developers
12
+ Classifier: License :: OSI Approved :: MIT License
13
+ Classifier: Operating System :: OS Independent
14
+ Classifier: Programming Language :: Python
15
+ Classifier: Programming Language :: Python :: 3
16
+ Classifier: Programming Language :: Python :: 3.6
17
+ Classifier: Programming Language :: Python :: 3.7
18
+ Classifier: Programming Language :: Python :: 3.8
19
+ Classifier: Programming Language :: Python :: 3.9
20
+ Classifier: Programming Language :: Python :: 3.10
21
+ Classifier: Programming Language :: Python :: 3.11
22
+ Classifier: Programming Language :: Python :: 3.12
23
+ Classifier: Programming Language :: Python :: 3.13
24
+ Classifier: Topic :: Terminals
25
+ Classifier: Topic :: Utilities
26
+ Requires-Python: >=3.6
27
+ Description-Content-Type: text/markdown
28
+ License-File: LICENSE
29
+ Requires-Dist: colorama; sys_platform == "win32"
30
+ Provides-Extra: development
31
+ Requires-Dist: black; extra == "development"
32
+ Requires-Dist: flake8; extra == "development"
33
+ Requires-Dist: mypy; extra == "development"
34
+ Requires-Dist: pytest; extra == "development"
35
+ Requires-Dist: types-colorama; extra == "development"
36
+ Dynamic: author
37
+ Dynamic: author-email
38
+ Dynamic: classifier
39
+ Dynamic: description
40
+ Dynamic: description-content-type
41
+ Dynamic: home-page
42
+ Dynamic: license
43
+ Dynamic: license-file
44
+ Dynamic: provides-extra
45
+ Dynamic: requires-python
46
+ Dynamic: summary
47
+
48
+ # Log formatting with colors!
49
+
50
+ [![](https://img.shields.io/pypi/v/colorlog.svg)](https://pypi.org/project/colorlog/)
51
+ [![](https://img.shields.io/pypi/l/colorlog.svg)](https://pypi.org/project/colorlog/)
52
+
53
+ Add colours to the output of Python's `logging` module.
54
+
55
+ - [Source on GitHub](https://github.com/borntyping/python-colorlog)
56
+ - [Package on PyPI](https://pypi.org/pypi/colorlog/)
57
+
58
+ ## Status
59
+
60
+ colorlog currently requires Python 3.6 or higher. Older versions (below 5.x.x)
61
+ support Python 2.6 and above.
62
+
63
+ - colorlog 6.x requires Python 3.6 or higher.
64
+ - colorlog 5.x is an interim version that will warn Python 2 users to downgrade.
65
+ - colorlog 4.x is the final version supporting Python 2.
66
+
67
+ [colorama] is included as a dependency on Windows, where it is automatically
68
+ initialised to support colored output.
69
+
70
+ This library is over a decade old and supported a wide set of Python versions
71
+ for most of its life, which has made it a difficult library to add new features
72
+ to. colorlog 6 may break backwards compatibility so that newer features
73
+ can be added more easily, but may still not accept all changes or feature
74
+ requests. colorlog 4 might accept essential bugfixes but should not be
75
+ considered actively maintained and will not accept any major changes or new
76
+ features.
77
+
78
+ ## Installation
79
+
80
+ Install from PyPI with:
81
+
82
+ ```bash
83
+ pip install colorlog
84
+ ```
85
+
86
+ Several Linux distributions provide official packages ([Debian], [Arch],
87
+ [Fedora], [Gentoo], [OpenSuse] and [Ubuntu]), and others have user provided
88
+ packages ([BSD ports], [Conda]).
89
+
90
+ ## Usage
91
+
92
+ ```python
93
+ import colorlog
94
+
95
+ handler = colorlog.StreamHandler()
96
+ handler.setFormatter(colorlog.ColoredFormatter())
97
+
98
+ logger = colorlog.getLogger('example')
99
+ logger.addHandler(handler)
100
+ ```
101
+
102
+ ### Arguments
103
+
104
+ `ColoredFormatter` extends [`logging.Formatter`][formatter] and accepts the
105
+ following arguments:
106
+
107
+ - `fmt` *(default=`None`)*: A format string used to output the message. If
108
+ `None`, a default format string is selected based on `style` (e.g.
109
+ `%(log_color)s%(levelname)s:%(name)s:%(message)s` for `%` style).
110
+ - `datefmt`, `style`, `validate`, `defaults`: see
111
+ [`logging.Formatter`][formatter].
112
+ - `reset` *(default=`True`)*: Implicitly adds a color reset code to the
113
+ message output, unless the output already ends with one.
114
+ - `log_colors` *(default=`None`)*: A mapping of record level names to color
115
+ names. If `None`, `colorlog.default_log_colors` is used.
116
+ - `secondary_log_colors` *(default=`None`)*: A mapping of names to `log_colors`
117
+ style mappings, defining additional colors that can be used in format strings.
118
+ If `None`, an empty mapping is used.
119
+ - `stream` *(default=`None`)*: The stream being written to (e.g. `sys.stderr`).
120
+ Used to detect whether the output is a TTY. Colors are disabled automatically
121
+ on non-TTY streams unless `force_color` is set.
122
+ - `no_color` *(default=`False`)*: Disable color output. Can also be set via the
123
+ `NO_COLOR` environment variable.
124
+ - `force_color` *(default=`False`)*: Force color output even on non-TTY streams.
125
+ Takes precedence over `no_color`. Can also be set via the `FORCE_COLOR`
126
+ environment variable.
127
+
128
+ ### Color escape codes
129
+
130
+ Color escape codes can be selected based on the log records level, by adding
131
+ parameters to the format string:
132
+
133
+ - `log_color`: Return the color associated with the records level.
134
+ - `<name>_log_color`: Return another color based on the records level if the
135
+ formatter has secondary colors configured (see `secondary_log_colors` below).
136
+
137
+ Multiple escape codes can be used at once by joining them with commas when
138
+ configuring the color for a log level (but can't be used directly in the format
139
+ string). For example, `black,bg_white` would use the escape codes for black
140
+ text on a white background.
141
+
142
+ The following escape codes are made available for use in the format string:
143
+
144
+ - `{color}`, `fg_{color}`, `bg_{color}`: Foreground and background colors.
145
+ - `bold`, `bold_{color}`, `fg_bold_{color}`, `bg_bold_{color}`: Bold/bright
146
+ colors.
147
+ - `thin`, `thin_{color}`, `fg_thin_{color}`: Thin colors (terminal dependent).
148
+ - `reset`: Clear all formatting (both foreground and background colors).
149
+
150
+ The available color names are:
151
+
152
+ - `black`
153
+ - `red`
154
+ - `green`
155
+ - `yellow`
156
+ - `blue`
157
+ - `purple`
158
+ - `cyan`
159
+ - `white`
160
+
161
+ You can also use "bright" colors. These aren't standard ANSI codes, and
162
+ support for these varies wildly across different terminals.
163
+
164
+ - `light_black`
165
+ - `light_red`
166
+ - `light_green`
167
+ - `light_yellow`
168
+ - `light_blue`
169
+ - `light_purple`
170
+ - `light_cyan`
171
+ - `light_white`
172
+
173
+ In addition to pre-defined color names, you can use integers from 0 to 255 for
174
+ 256-color support (e.g. `fg_196`, `bg_42`).
175
+
176
+ ## Examples
177
+
178
+ ![Example output](docs/example.png)
179
+
180
+ The following snippet creates a `ColoredFormatter` for use in a logging setup,
181
+ with a custom format string and log colors:
182
+
183
+ ```python
184
+ from colorlog import ColoredFormatter
185
+
186
+ formatter = ColoredFormatter(
187
+ "%(log_color)s%(levelname)-8s%(reset)s %(blue)s%(message)s",
188
+ log_colors={
189
+ "DEBUG": "cyan",
190
+ "INFO": "green",
191
+ "WARNING": "yellow",
192
+ "ERROR": "red",
193
+ "CRITICAL": "red,bg_white",
194
+ }
195
+ )
196
+ ```
197
+
198
+ *See `docs/example.py` for full example script.*
199
+
200
+ ### Using `secondary_log_colors`
201
+
202
+ Secondary log colors are a way to have more than one color that is selected
203
+ based on the log level. Each key in `secondary_log_colors` adds an attribute
204
+ that can be used in format strings (`message` becomes `message_log_color`), and
205
+ has a corresponding value that is identical in format to the `log_colors`
206
+ argument.
207
+
208
+ The following example highlights the level name using the default log colors,
209
+ and highlights the message in red for `error` and `critical` level log messages.
210
+
211
+ ```python
212
+ from colorlog import ColoredFormatter
213
+
214
+ formatter = ColoredFormatter(
215
+ "%(log_color)s%(levelname)-8s%(reset)s %(message_log_color)s%(message)s",
216
+ secondary_log_colors={
217
+ 'message': {
218
+ 'ERROR': 'red',
219
+ 'CRITICAL': 'red'
220
+ }
221
+ }
222
+ )
223
+ ```
224
+
225
+ ### With [`dictConfig`][dictconfig]
226
+
227
+ ```python
228
+ logging.config.dictConfig({
229
+ 'formatters': {
230
+ 'colored': {
231
+ '()': 'colorlog.ColoredFormatter',
232
+ 'format': "%(log_color)s%(levelname)-8s%(reset)s %(blue)s%(message)s"
233
+ }
234
+ }
235
+ })
236
+ ```
237
+
238
+ A full example dictionary can be found in `tests/test_colorlog.py`.
239
+
240
+ ### With [`fileConfig`][fileconfig]
241
+
242
+ ```ini
243
+ ...
244
+
245
+ [formatters]
246
+ keys=color
247
+
248
+ [formatter_color]
249
+ class=colorlog.ColoredFormatter
250
+ format=%(log_color)s%(levelname)-8s%(reset)s %(bg_blue)s[%(name)s]%(reset)s %(message)s from fileConfig
251
+ datefmt=%m-%d %H:%M:%S
252
+ ```
253
+
254
+ An instance of ColoredFormatter created with those arguments will then be used
255
+ by any handlers that are configured to use the `color` formatter.
256
+
257
+ A full example configuration can be found in `tests/test_config.ini`.
258
+
259
+ ### With custom log levels
260
+
261
+ ColoredFormatter will work with custom log levels added with
262
+ [`logging.addLevelName`][addlevelname]:
263
+
264
+ ```python
265
+ import logging, colorlog
266
+ TRACE = 5
267
+ logging.addLevelName(TRACE, 'TRACE')
268
+ formatter = colorlog.ColoredFormatter(log_colors={'TRACE': 'yellow'})
269
+ handler = logging.StreamHandler()
270
+ handler.setFormatter(formatter)
271
+ logger = logging.getLogger('example')
272
+ logger.addHandler(handler)
273
+ logger.setLevel('TRACE')
274
+ logger.log(TRACE, 'a message using a custom level')
275
+ ```
276
+
277
+ ## Tests
278
+
279
+ Tests similar to the above examples are found in `tests/test_colorlog.py`.
280
+
281
+ ## Status
282
+
283
+ colorlog is in maintenance mode. I try and ensure bugfixes are published,
284
+ but compatibility a wide set of Python versions makes this a difficult
285
+ codebase to add features to. Any changes that might break backwards
286
+ compatibility for existing users will not be considered.
287
+
288
+ ## Alternatives
289
+
290
+ There are some more modern libraries for improving Python logging you may
291
+ find useful.
292
+
293
+ - [structlog]
294
+ - [jsonlog]
295
+
296
+ ## Projects using colorlog
297
+
298
+ GitHub provides [a list of projects that depend on colorlog][dependents].
299
+
300
+ Some early adopters included [Errbot], [Pythran], and [zenlog].
301
+
302
+ ## Licence
303
+
304
+ Copyright (c) 2012-2025 Sam Clements <sam@borntyping.co.uk>
305
+
306
+ Permission is hereby granted, free of charge, to any person obtaining a copy of
307
+ this software and associated documentation files (the "Software"), to deal in
308
+ the Software without restriction, including without limitation the rights to
309
+ use, copy, modify, merge, publish, distribute, sublicense, and/or sell copies of
310
+ the Software, and to permit persons to whom the Software is furnished to do so,
311
+ subject to the following conditions:
312
+
313
+ The above copyright notice and this permission notice shall be included in all
314
+ copies or substantial portions of the Software.
315
+
316
+ THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR
317
+ IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY, FITNESS
318
+ FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE AUTHORS OR
319
+ COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER LIABILITY, WHETHER
320
+ IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM, OUT OF OR IN
321
+ CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE SOFTWARE.
322
+
323
+ [addlevelname]: https://docs.python.org/3/library/logging.html#logging.addLevelName
324
+ [arch]: https://archlinux.org/packages/extra/any/python-colorlog/
325
+ [bsd ports]: https://www.freshports.org/devel/py-colorlog/
326
+ [colorama]: https://pypi.python.org/pypi/colorama
327
+ [conda]: https://anaconda.org/conda-forge/colorlog
328
+ [debian]: https://packages.debian.org/trixie/python3-colorlog
329
+ [dependents]: https://github.com/borntyping/python-colorlog/network/dependents?package_id=UGFja2FnZS01MDk3NDcyMQ%3D%3D
330
+ [dictconfig]: http://docs.python.org/3/library/logging.config.html#logging.config.dictConfig
331
+ [errbot]: http://errbot.io/
332
+ [fedora]: https://src.fedoraproject.org/rpms/python-colorlog
333
+ [fileconfig]: http://docs.python.org/3/library/logging.config.html#logging.config.fileConfig
334
+ [formatter]: http://docs.python.org/3/library/logging.html#logging.Formatter
335
+ [gentoo]: https://packages.gentoo.org/packages/dev-python/colorlog
336
+ [jsonlog]: https://github.com/borntyping/jsonlog
337
+ [opensuse]: http://rpm.pbone.net/index.php3?stat=3&search=python-colorlog&srodzaj=3
338
+ [pythran]: https://github.com/serge-sans-paille/pythran
339
+ [structlog]: https://www.structlog.org/en/stable/
340
+ [ubuntu]: https://launchpad.net/python-colorlog
341
+ [zenlog]: https://github.com/ManufacturaInd/python-zenlog
.cache/pip/http-v2/8/f/0/a/d/8f0ad583652318494c12da41e4d30ff6225ec73d448a0754a0a7e898 ADDED
Binary file (1.89 kB). View file
 
.cache/pip/http-v2/9/0/6/7/9/906797ab7b3f56fdd856b186be66ce1ad5fb99862a404c1091a707b6 ADDED
Binary file (1.89 kB). View file
 
.cache/pip/http-v2/9/0/6/7/9/906797ab7b3f56fdd856b186be66ce1ad5fb99862a404c1091a707b6.body ADDED
Binary file (81.9 kB). View file
 
.cache/pip/http-v2/9/0/f/6/e/90f6e704e426d3e4b799bd86b309263491ea7f0afc8f3ceaab5d10eb ADDED
Binary file (1.25 kB). View file
 
.cache/pip/http-v2/9/6/7/8/5/967857dd3681a1bb83c9632aad9815556f1da84934ad6aa3be0d7700 ADDED
Binary file (1.89 kB). View file
 
.cache/pip/http-v2/9/6/7/8/5/967857dd3681a1bb83c9632aad9815556f1da84934ad6aa3be0d7700.body ADDED
Binary file (1.08 kB). View file
 
.cache/pip/http-v2/9/6/e/6/8/96e68fa7e813913744eed43fc3c671900cf7eb7d5088536270636acf ADDED
Binary file (1.2 kB). View file
 
.cache/pip/http-v2/9/b/0/a/e/9b0ae3352e0682a4ded5c6f53d9053328ff974179c7dcd6dac96d2a9 ADDED
Binary file (1.89 kB). View file
 
.cache/pip/http-v2/9/b/0/c/d/9b0cd65992ff5b9edd0441126311787aa8872587ece580196906a213 ADDED
Binary file (1.25 kB). View file
 
.cache/pip/http-v2/9/b/c/f/c/9bcfc39a5bcc4f49a5aca18ef0b4567e959c4b71251fb90ea1371fe7.body ADDED
@@ -0,0 +1,1600 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ Metadata-Version: 2.4
2
+ Name: tqdm
3
+ Version: 4.70.0
4
+ Summary: Fast, Extensible Progress Meter
5
+ Maintainer-email: tqdm developers <devs@tqdm.ml>
6
+ License: MPL-2.0 AND MIT
7
+ Project-URL: homepage, https://tqdm.github.io
8
+ Project-URL: repository, https://github.com/tqdm/tqdm
9
+ Project-URL: changelog, https://tqdm.github.io/releases
10
+ Project-URL: wiki, https://github.com/tqdm/tqdm/wiki
11
+ Keywords: progressbar,progressmeter,progress,bar,meter,rate,eta,console,terminal,time
12
+ Classifier: Development Status :: 5 - Production/Stable
13
+ Classifier: Environment :: Console
14
+ Classifier: Environment :: MacOS X
15
+ Classifier: Environment :: Other Environment
16
+ Classifier: Environment :: Win32 (MS Windows)
17
+ Classifier: Environment :: X11 Applications
18
+ Classifier: Framework :: IPython
19
+ Classifier: Framework :: Jupyter
20
+ Classifier: Intended Audience :: Developers
21
+ Classifier: Intended Audience :: Education
22
+ Classifier: Intended Audience :: End Users/Desktop
23
+ Classifier: Intended Audience :: Other Audience
24
+ Classifier: Intended Audience :: System Administrators
25
+ Classifier: Operating System :: MacOS
26
+ Classifier: Operating System :: MacOS :: MacOS X
27
+ Classifier: Operating System :: Microsoft
28
+ Classifier: Operating System :: Microsoft :: MS-DOS
29
+ Classifier: Operating System :: Microsoft :: Windows
30
+ Classifier: Operating System :: POSIX
31
+ Classifier: Operating System :: POSIX :: BSD
32
+ Classifier: Operating System :: POSIX :: BSD :: FreeBSD
33
+ Classifier: Operating System :: POSIX :: Linux
34
+ Classifier: Operating System :: POSIX :: SunOS/Solaris
35
+ Classifier: Operating System :: Unix
36
+ Classifier: Programming Language :: Python
37
+ Classifier: Programming Language :: Python :: 3
38
+ Classifier: Programming Language :: Python :: 3.8
39
+ Classifier: Programming Language :: Python :: 3.9
40
+ Classifier: Programming Language :: Python :: 3.10
41
+ Classifier: Programming Language :: Python :: 3.11
42
+ Classifier: Programming Language :: Python :: 3.12
43
+ Classifier: Programming Language :: Python :: 3.13
44
+ Classifier: Programming Language :: Python :: 3.14
45
+ Classifier: Programming Language :: Python :: 3 :: Only
46
+ Classifier: Programming Language :: Python :: Implementation
47
+ Classifier: Programming Language :: Python :: Implementation :: IronPython
48
+ Classifier: Programming Language :: Python :: Implementation :: PyPy
49
+ Classifier: Programming Language :: Unix Shell
50
+ Classifier: Topic :: Desktop Environment
51
+ Classifier: Topic :: Education :: Computer Aided Instruction (CAI)
52
+ Classifier: Topic :: Education :: Testing
53
+ Classifier: Topic :: Office/Business
54
+ Classifier: Topic :: Other/Nonlisted Topic
55
+ Classifier: Topic :: Software Development :: Build Tools
56
+ Classifier: Topic :: Software Development :: Libraries
57
+ Classifier: Topic :: Software Development :: Libraries :: Python Modules
58
+ Classifier: Topic :: Software Development :: Pre-processors
59
+ Classifier: Topic :: Software Development :: User Interfaces
60
+ Classifier: Topic :: System :: Installation/Setup
61
+ Classifier: Topic :: System :: Logging
62
+ Classifier: Topic :: System :: Monitoring
63
+ Classifier: Topic :: System :: Shells
64
+ Classifier: Topic :: Terminals
65
+ Classifier: Topic :: Utilities
66
+ Requires-Python: >=3.8
67
+ Description-Content-Type: text/x-rst
68
+ License-File: LICENCE
69
+ Requires-Dist: colorama; platform_system == "Windows"
70
+ Provides-Extra: discord
71
+ Requires-Dist: requests; extra == "discord"
72
+ Requires-Dist: envwrap; extra == "discord"
73
+ Provides-Extra: slack
74
+ Requires-Dist: slack-sdk; extra == "slack"
75
+ Requires-Dist: envwrap; extra == "slack"
76
+ Provides-Extra: telegram
77
+ Requires-Dist: requests; extra == "telegram"
78
+ Requires-Dist: envwrap; extra == "telegram"
79
+ Provides-Extra: notebook
80
+ Requires-Dist: ipywidgets>=6; extra == "notebook"
81
+ Dynamic: license-file
82
+
83
+ |Logo|
84
+
85
+ tqdm
86
+ ====
87
+
88
+ |Py-Versions| |Versions| |Conda-Forge-Status| |Docker| |Snapcraft|
89
+
90
+ |Build-Status| |Coverage-Status| |Branch-Coverage-Status| |Codacy-Grade| |Libraries-Rank| |PyPI-Downloads|
91
+
92
+ |LICENCE| |OpenHub-Status| |colab-demo| |binder-demo| |awesome-python|
93
+
94
+ ``tqdm`` derives from the Arabic word *taqaddum* (تقدّم) which can mean "progress,"
95
+ and is an abbreviation for "I love you so much" in Spanish (*te quiero demasiado*).
96
+
97
+ Instantly make your loops show a smart progress meter - just wrap any
98
+ iterable with ``tqdm(iterable)``, and you're done!
99
+
100
+ .. code:: python
101
+
102
+ from tqdm import tqdm
103
+ for i in tqdm(range(10000)):
104
+ ...
105
+
106
+ ``76%|████████████████████████        | 7568/10000 [00:33<00:10, 229.00it/s]``
107
+
108
+ ``trange(N)`` can also be used as a convenient shortcut for
109
+ ``tqdm(range(N))``.
110
+
111
+ |Screenshot|
112
+ |Video| |Slides| |Merch|
113
+
114
+ It can also be executed as a module with pipes:
115
+
116
+ .. code:: sh
117
+
118
+ $ seq 9999999 | tqdm --bytes | wc -l
119
+ 75.2MB [00:00, 217MB/s]
120
+ 9999999
121
+
122
+ $ tar -zcf - docs/ | tqdm --bytes --total `du -sb docs/ | cut -f1` \
123
+ > backup.tgz
124
+ 32%|██████████▍ | 8.89G/27.9G [00:42<01:31, 223MB/s]
125
+
126
+ Overhead is low -- about 60ns per iteration (80ns with ``tqdm.gui``), and is
127
+ unit tested against performance regression.
128
+ By comparison, the well-established
129
+ `ProgressBar <https://github.com/niltonvolpato/python-progressbar>`__ has
130
+ an 800ns/iter overhead.
131
+
132
+ In addition to its low overhead, ``tqdm`` uses smart algorithms to predict
133
+ the remaining time and to skip unnecessary iteration displays, which allows
134
+ for a negligible overhead in most cases.
135
+
136
+ ``tqdm`` works on any platform
137
+ (Linux, Windows, Mac, FreeBSD, NetBSD, Solaris/SunOS),
138
+ in any console or in a GUI, and is also friendly with IPython/Jupyter notebooks.
139
+
140
+ ``tqdm`` does not require any dependencies (not even ``curses``!), just
141
+ Python and an environment supporting ``carriage return \r`` and
142
+ ``line feed \n`` control characters.
143
+
144
+ **Featured Sponsors**
145
+
146
+ ======== ================================================
147
+ |OpenAI| Your Logo Here
148
+ ======== ================================================
149
+ OpenAI `Sponsors <https://github.com/sponsors/tqdm>`__
150
+ ======== ================================================
151
+
152
+ .. |OpenAI| image:: https://avatars.githubusercontent.com/u/14957082?s=96
153
+ :target: https://openai.com
154
+
155
+ ------------------------------------------
156
+
157
+ .. contents:: Table of contents
158
+ :backlinks: top
159
+ :local:
160
+
161
+
162
+ Installation
163
+ ------------
164
+
165
+ Latest PyPI stable release
166
+ ~~~~~~~~~~~~~~~~~~~~~~~~~~
167
+
168
+ |Versions| |PyPI-Downloads| |Libraries-Dependents|
169
+
170
+ .. code:: sh
171
+
172
+ pip install tqdm
173
+
174
+ Latest development release on GitHub
175
+ ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
176
+
177
+ |GitHub-Status| |GitHub-Stars| |GitHub-Commits| |GitHub-Forks| |GitHub-Updated|
178
+
179
+ Pull and install pre-release ``devel`` branch:
180
+
181
+ .. code:: sh
182
+
183
+ pip install "git+https://github.com/tqdm/tqdm.git@devel#egg=tqdm"
184
+
185
+ Latest Conda release
186
+ ~~~~~~~~~~~~~~~~~~~~
187
+
188
+ |Conda-Forge-Status|
189
+
190
+ .. code:: sh
191
+
192
+ conda install -c conda-forge tqdm
193
+
194
+ Latest Snapcraft release
195
+ ~~~~~~~~~~~~~~~~~~~~~~~~
196
+
197
+ |Snapcraft|
198
+
199
+ There are 3 channels to choose from:
200
+
201
+ .. code:: sh
202
+
203
+ snap install tqdm # implies --stable, i.e. latest tagged release
204
+ snap install tqdm --candidate # master branch
205
+ snap install tqdm --edge # devel branch
206
+
207
+ Note that ``snap`` binaries are purely for CLI use (not ``import``-able), and
208
+ automatically set up ``bash`` tab-completion.
209
+
210
+ Latest Docker release
211
+ ~~~~~~~~~~~~~~~~~~~~~
212
+
213
+ |Docker|
214
+
215
+ .. code:: sh
216
+
217
+ docker pull tqdm/tqdm
218
+ docker run -i --rm tqdm/tqdm --help
219
+
220
+ Other
221
+ ~~~~~
222
+
223
+ There are other (unofficial) places where ``tqdm`` may be downloaded, particularly for CLI use:
224
+
225
+ |Repology|
226
+
227
+ .. |Repology| image:: https://repology.org/badge/tiny-repos/python:tqdm.svg
228
+ :target: https://repology.org/project/python:tqdm/versions
229
+
230
+ Changelog
231
+ ---------
232
+
233
+ The list of all changes is available either on GitHub's Releases:
234
+ |GitHub-Status|, on the
235
+ `wiki <https://github.com/tqdm/tqdm/wiki/Releases>`__, or on the
236
+ `website <https://tqdm.github.io/releases>`__.
237
+
238
+
239
+ Usage
240
+ -----
241
+
242
+ ``tqdm`` is very versatile and can be used in a number of ways.
243
+ The three main ones are given below.
244
+
245
+ Iterable-based
246
+ ~~~~~~~~~~~~~~
247
+
248
+ Wrap ``tqdm()`` around any iterable:
249
+
250
+ .. code:: python
251
+
252
+ from tqdm import tqdm
253
+ from time import sleep
254
+
255
+ text = ""
256
+ for char in tqdm(["a", "b", "c", "d"]):
257
+ sleep(0.25)
258
+ text = text + char
259
+
260
+ ``trange(i)`` is a special optimised instance of ``tqdm(range(i))``:
261
+
262
+ .. code:: python
263
+
264
+ from tqdm import trange
265
+
266
+ for i in trange(100):
267
+ sleep(0.01)
268
+
269
+ Instantiation outside of the loop allows for manual control over ``tqdm()``:
270
+
271
+ .. code:: python
272
+
273
+ pbar = tqdm(["a", "b", "c", "d"])
274
+ for char in pbar:
275
+ sleep(0.25)
276
+ pbar.set_description("Processing %s" % char)
277
+
278
+ Manual
279
+ ~~~~~~
280
+
281
+ Manual control of ``tqdm()`` updates using a ``with`` statement:
282
+
283
+ .. code:: python
284
+
285
+ with tqdm(total=100) as pbar:
286
+ for i in range(10):
287
+ sleep(0.1)
288
+ pbar.update(10)
289
+
290
+ If the optional variable ``total`` (or an iterable with ``len()``) is
291
+ provided, predictive stats are displayed.
292
+
293
+ ``with`` is also optional (you can just assign ``tqdm()`` to a variable,
294
+ but in this case don't forget to ``del`` or ``close()`` at the end:
295
+
296
+ .. code:: python
297
+
298
+ pbar = tqdm(total=100)
299
+ for i in range(10):
300
+ sleep(0.1)
301
+ pbar.update(10)
302
+ pbar.close()
303
+
304
+ Module
305
+ ~~~~~~
306
+
307
+ Perhaps the most wonderful use of ``tqdm`` is in a script or on the command
308
+ line. Simply inserting ``tqdm`` (or ``python -m tqdm``) between pipes will pass
309
+ through all ``stdin`` to ``stdout`` while printing progress to ``stderr``.
310
+
311
+ The example below demonstrate counting the number of lines in all Python files
312
+ in the current directory, with timing information included.
313
+
314
+ .. code:: sh
315
+
316
+ $ time find . -name '*.py' -type f -exec cat \{} \; | wc -l
317
+ 857365
318
+
319
+ real 0m3.458s
320
+ user 0m0.274s
321
+ sys 0m3.325s
322
+
323
+ $ time find . -name '*.py' -type f -exec cat \{} \; | tqdm | wc -l
324
+ 857366it [00:03, 246471.31it/s]
325
+ 857365
326
+
327
+ real 0m3.585s
328
+ user 0m0.862s
329
+ sys 0m3.358s
330
+
331
+ Note that the usual arguments for ``tqdm`` can also be specified.
332
+
333
+ .. code:: sh
334
+
335
+ $ find . -name '*.py' -type f -exec cat \{} \; |
336
+ tqdm --unit loc --unit_scale --total 857366 >> /dev/null
337
+ 100%|█████████████████████████████████| 857K/857K [00:04<00:00, 246Kloc/s]
338
+
339
+ Backing up a large directory?
340
+
341
+ .. code:: sh
342
+
343
+ $ tar -zcf - docs/ | tqdm --bytes --total `du -sb docs/ | cut -f1` \
344
+ > backup.tgz
345
+ 44%|██████████████▊ | 153M/352M [00:14<00:18, 11.0MB/s]
346
+
347
+ This can be beautified further:
348
+
349
+ .. code:: sh
350
+
351
+ $ BYTES=$(du -sb docs/ | cut -f1)
352
+ $ tar -cf - docs/ \
353
+ | tqdm --bytes --total "$BYTES" --desc Processing | gzip \
354
+ | tqdm --bytes --total "$BYTES" --desc Compressed --position 1 \
355
+ > ~/backup.tgz
356
+ Processing: 100%|██████████████████████| 352M/352M [00:14<00:00, 30.2MB/s]
357
+ Compressed: 42%|█████████▎ | 148M/352M [00:14<00:19, 10.9MB/s]
358
+
359
+ Or done on a file level using 7-zip:
360
+
361
+ .. code:: sh
362
+
363
+ $ 7z a -bd -r backup.7z docs/ | grep Compressing \
364
+ | tqdm --total $(find docs/ -type f | wc -l) --unit files \
365
+ | grep -v Compressing
366
+ 100%|██████████████████████████▉| 15327/15327 [01:00<00:00, 712.96files/s]
367
+
368
+ Pre-existing CLI programs already outputting basic progress information will
369
+ benefit from ``tqdm``'s ``--update`` and ``--update_to`` flags:
370
+
371
+ .. code:: sh
372
+
373
+ $ seq 3 0.1 5 | tqdm --total 5 --update_to --null
374
+ 100%|████████████████████████████████████| 5.0/5 [00:00<00:00, 9673.21it/s]
375
+ $ seq 10 | tqdm --update --null # 1 + 2 + ... + 10 = 55 iterations
376
+ 55it [00:00, 90006.52it/s]
377
+
378
+ FAQ and Known Issues
379
+ --------------------
380
+
381
+ |GitHub-Issues|
382
+
383
+ The most common issues relate to excessive output on multiple lines, instead
384
+ of a neat one-line progress bar.
385
+
386
+ - Consoles in general: require support for carriage return (``CR``, ``\r``).
387
+
388
+ * Some cloud logging consoles which don't support ``\r`` properly
389
+ (`cloudwatch <https://github.com/tqdm/tqdm/issues/966>`__,
390
+ `K8s <https://github.com/tqdm/tqdm/issues/1319>`__) may benefit from
391
+ ``export TQDM_POSITION=-1``.
392
+
393
+ - Nested progress bars:
394
+
395
+ * Consoles in general: require support for moving cursors up to the
396
+ previous line. For example,
397
+ `IDLE <https://github.com/tqdm/tqdm/issues/191#issuecomment-230168030>`__,
398
+ `ConEmu <https://github.com/tqdm/tqdm/issues/254>`__ and
399
+ `PyCharm <https://github.com/tqdm/tqdm/issues/203>`__ (also
400
+ `here <https://github.com/tqdm/tqdm/issues/208>`__,
401
+ `here <https://github.com/tqdm/tqdm/issues/307>`__, and
402
+ `here <https://github.com/tqdm/tqdm/issues/454#issuecomment-335416815>`__)
403
+ lack full support.
404
+ * Windows: additionally may require the Python module ``colorama``
405
+ to ensure nested bars stay within their respective lines.
406
+
407
+ - Unicode:
408
+
409
+ * Environments which report that they support unicode will have solid smooth
410
+ progress bars. The fallback is an ``ascii``-only bar.
411
+ * Windows consoles often only partially support unicode and thus
412
+ `often require explicit ascii=True <https://github.com/tqdm/tqdm/issues/454#issuecomment-335416815>`__
413
+ (also `here <https://github.com/tqdm/tqdm/issues/499>`__). This is due to
414
+ either normal-width unicode characters being incorrectly displayed as
415
+ "wide", or some unicode characters not rendering.
416
+
417
+ - Wrapping generators:
418
+
419
+ * Generator wrapper functions tend to hide the length of iterables.
420
+ ``tqdm`` does not.
421
+ * Replace ``tqdm(enumerate(...))`` with ``enumerate(tqdm(...))`` or
422
+ ``tqdm(enumerate(x), total=len(x), ...)``.
423
+ The same applies to ``numpy.ndenumerate``.
424
+ * Replace ``tqdm(zip(a, b))`` with ``zip(tqdm(a), b)`` or even
425
+ ``zip(tqdm(a), tqdm(b))``.
426
+ * The same applies to ``itertools``.
427
+ * Some useful convenience functions can be found under ``tqdm.contrib``.
428
+
429
+ - `No intermediate output in docker-compose <https://github.com/tqdm/tqdm/issues/771>`__:
430
+ use ``docker-compose run`` instead of ``docker-compose up`` and ``tty: true``.
431
+
432
+ - Overriding defaults via environment variables:
433
+ e.g. in CI/cloud jobs, ``export TQDM_MININTERVAL=5`` to avoid log spam.
434
+ This override logic is handled by the ``tqdm.utils.envwrap`` decorator
435
+ (useful independent of ``tqdm``).
436
+
437
+ If you come across any other difficulties, browse and file |GitHub-Issues|.
438
+
439
+ Documentation
440
+ -------------
441
+
442
+ |Py-Versions| |README-Hits| (Since 19 May 2016)
443
+
444
+ .. code:: python
445
+
446
+ class tqdm():
447
+ """
448
+ Decorate an iterable object, returning an iterator which acts exactly
449
+ like the original iterable, but prints a dynamically updating
450
+ progress bar every time a value is requested.
451
+ """
452
+
453
+ @envwrap("tqdm") # override defaults via env vars
454
+ def __init__(self, iterable=None, desc=None, total=None, leave=True,
455
+ file=None, ncols=None, mininterval=0.1,
456
+ maxinterval=10.0, miniters=None, ascii=None, disable=False,
457
+ unit='it', unit_scale=False, dynamic_ncols=False,
458
+ smoothing=0.3, bar_format=None, initial=0, position=None,
459
+ postfix=None, unit_divisor=1000, write_bytes=False,
460
+ lock_args=None, nrows=None, colour=None, delay=0):
461
+
462
+ Parameters
463
+ ~~~~~~~~~~
464
+
465
+ * iterable : iterable, optional
466
+ Iterable to decorate with a progress bar.
467
+ Leave blank to manually manage the updates.
468
+ * desc : str, optional
469
+ Prefix for the progress bar.
470
+ * total : int or float, optional
471
+ The number of expected iterations. If unspecified,
472
+ len(iterable) is used if possible. If float("inf") or as a last
473
+ resort, only basic progress statistics are displayed
474
+ (no ETA, no progress bar).
475
+ If ``gui`` is True and this parameter needs subsequent updating,
476
+ specify an initial arbitrary large positive number,
477
+ e.g. 9e9.
478
+ * leave : bool, optional
479
+ If [default: True], keeps all traces of the progress bar
480
+ upon termination of iteration.
481
+ If ``None``, will leave only if ``position`` is ``0``.
482
+ * file : ``io.TextIOWrapper`` or ``io.StringIO``, optional
483
+ Specifies where to output the progress messages
484
+ (default: sys.stderr). Uses ``file.write(str)`` and ``file.flush()``
485
+ methods. For encoding, see ``write_bytes``.
486
+ * ncols : int, optional
487
+ The width of the entire output message. If specified,
488
+ dynamically resizes the progress bar to stay within this bound.
489
+ If unspecified, attempts to use environment width. The
490
+ fallback is a meter width of 10 and no limit for the counter and
491
+ statistics. If 0, will not print any meter (only stats).
492
+ * mininterval : float, optional
493
+ Minimum progress display update interval [default: 0.1] seconds.
494
+ * maxinterval : float, optional
495
+ Maximum progress display update interval [default: 10] seconds.
496
+ Automatically adjusts ``miniters`` to correspond to ``mininterval``
497
+ after long display update lag. Only works if ``dynamic_miniters``
498
+ or monitor thread is enabled.
499
+ * miniters : int or float, optional
500
+ Minimum progress display update interval, in iterations.
501
+ If 0 and ``dynamic_miniters``, will automatically adjust to equal
502
+ ``mininterval`` (more CPU efficient, good for tight loops).
503
+ If > 0, will skip display of specified number of iterations.
504
+ Tweak this and ``mininterval`` to get very efficient loops.
505
+ If your progress is erratic with both fast and slow iterations
506
+ (network, skipping items, etc) you should set miniters=1.
507
+ * ascii : bool or str, optional
508
+ If unspecified or False, use unicode (smooth blocks) to fill
509
+ the meter. The fallback is to use ASCII characters " 123456789#".
510
+ * disable : bool, optional
511
+ Whether to disable the entire progress bar wrapper
512
+ [default: False]. If set to None, disable on non-TTY.
513
+ * unit : str, optional
514
+ String that will be used to define the unit of each iteration
515
+ [default: it].
516
+ * unit_scale : bool or int or float, optional
517
+ If 1 or True, the number of iterations will be reduced/scaled
518
+ automatically and a metric prefix following the
519
+ International System of Units standard will be added
520
+ (kilo, mega, etc.) [default: False]. If any other non-zero
521
+ number, will scale ``total`` and ``n``.
522
+ * dynamic_ncols : bool, optional
523
+ If set, constantly alters ``ncols`` and ``nrows`` to the
524
+ environment (allowing for window resizes) [default: False].
525
+ * smoothing : float, optional
526
+ Exponential moving average smoothing factor for speed estimates
527
+ (ignored in GUI mode). Ranges from 0 (average speed) to 1
528
+ (current/instantaneous speed) [default: 0.3].
529
+ * bar_format : str, optional
530
+ Specify a custom bar string formatting. May impact performance.
531
+ [default: '{l_bar}{bar}{r_bar}'], where
532
+ l_bar='{desc}: {percentage:3.0f}%|' and
533
+ r_bar='| {n_fmt}/{total_fmt} [{elapsed}<{remaining}, '
534
+ '{rate_fmt}{postfix}]'
535
+ Possible vars: l_bar, bar, r_bar, n, n_fmt, total, total_fmt,
536
+ percentage, elapsed, elapsed_s, ncols, nrows, desc, unit,
537
+ rate, rate_fmt, rate_noinv, rate_noinv_fmt,
538
+ rate_inv, rate_inv_fmt, postfix, unit_divisor,
539
+ remaining, remaining_s, eta.
540
+ Note that a trailing ": " is automatically removed after {desc}
541
+ if the latter is empty.
542
+ * initial : int or float, optional
543
+ The initial counter value. Useful when restarting a progress
544
+ bar [default: 0]. If using float, consider specifying ``{n:.3f}``
545
+ or similar in ``bar_format``, or specifying ``unit_scale``.
546
+ * position : int, optional
547
+ Specify the line offset to print this bar (starting from 0)
548
+ Automatic if unspecified.
549
+ Useful to manage multiple bars at once (eg, from threads).
550
+ * postfix : dict or ``*``, optional
551
+ Specify additional stats to display at the end of the bar.
552
+ Calls ``set_postfix(**postfix)`` if possible (dict).
553
+ * unit_divisor : float, optional
554
+ [default: 1000], ignored unless ``unit_scale`` is True.
555
+ * write_bytes : bool, optional
556
+ Whether to write bytes. If (default: False) will write unicode.
557
+ * lock_args : tuple, optional
558
+ Passed to ``refresh`` for intermediate output
559
+ (initialisation, iterating, and updating).
560
+ * nrows : int, optional
561
+ The screen height. If specified, hides nested bars outside this
562
+ bound. If unspecified, attempts to use environment height.
563
+ The fallback is 20.
564
+ * colour : str, optional
565
+ Bar colour (e.g. 'green', '#00ff00').
566
+ * delay : float, optional
567
+ Don't display until [default: 0] seconds have elapsed.
568
+
569
+ Extra CLI Options
570
+ ~~~~~~~~~~~~~~~~~
571
+
572
+ * delim : chr, optional
573
+ Delimiting character [default: '\n']. Use '\0' for null.
574
+ N.B.: on Windows systems, Python converts '\n' to '\r\n'.
575
+ * buf_size : int, optional
576
+ String buffer size in bytes [default: 256]
577
+ used when ``delim`` is specified.
578
+ * bytes : bool, optional
579
+ If true, will count bytes, ignore ``delim``, and default
580
+ ``unit_scale`` to True, ``unit_divisor`` to 1024, and ``unit`` to 'B'.
581
+ * tee : bool, optional
582
+ If true, passes ``stdin`` to both ``stderr`` and ``stdout``.
583
+ * update : bool, optional
584
+ If true, will treat input as newly elapsed iterations,
585
+ i.e. numbers to pass to ``update()``. Note that this is slow
586
+ (~2e5 it/s) since every input must be decoded as a number.
587
+ * update_to : bool, optional
588
+ If true, will treat input as total elapsed iterations,
589
+ i.e. numbers to assign to ``self.n``. Note that this is slow
590
+ (~2e5 it/s) since every input must be decoded as a number.
591
+ * null : bool, optional
592
+ If true, will discard input (no stdout).
593
+ * manpath : str, optional
594
+ Directory in which to install tqdm man pages.
595
+ * comppath : str, optional
596
+ Directory in which to place tqdm completion.
597
+ * log : str, optional
598
+ CRITICAL|FATAL|ERROR|WARN(ING)|[default: 'INFO']|DEBUG|NOTSET.
599
+
600
+ Returns
601
+ ~~~~~~~
602
+
603
+ * out : decorated iterator.
604
+
605
+ .. code:: python
606
+
607
+ class tqdm():
608
+ def update(self, n=1):
609
+ """
610
+ Manually update the progress bar, useful for streams
611
+ such as reading files.
612
+ E.g.:
613
+ >>> t = tqdm(total=filesize) # Initialise
614
+ >>> for current_buffer in stream:
615
+ ... ...
616
+ ... t.update(len(current_buffer))
617
+ >>> t.close()
618
+ The last line is highly recommended, but possibly not necessary if
619
+ `t.update()` will be called in such a way that `filesize` will be
620
+ exactly reached and printed.
621
+
622
+ Parameters
623
+ ----------
624
+ n : int or float, optional
625
+ Increment to add to the internal counter of iterations
626
+ [default: 1]. If using float, consider specifying `{n:.3f}`
627
+ or similar in `bar_format`, or specifying `unit_scale`.
628
+
629
+ Returns
630
+ -------
631
+ out : bool or None
632
+ True if a `display()` was triggered.
633
+ """
634
+
635
+ def close(self):
636
+ """Cleanup and (if leave=False) close the progress bar."""
637
+
638
+ def clear(self, nomove=False):
639
+ """Clear current bar display."""
640
+
641
+ def refresh(self):
642
+ """
643
+ Force refresh the display of this bar.
644
+
645
+ Parameters
646
+ ----------
647
+ nolock : bool, optional
648
+ If `True`, does not lock.
649
+ If [default: `False`]: calls `acquire()` on internal lock.
650
+ lock_args : tuple, optional
651
+ Passed to internal lock's `acquire()`.
652
+ If specified, will only `display()` if `acquire()` returns `True`.
653
+ """
654
+
655
+ def unpause(self):
656
+ """Restart tqdm timer from last print time."""
657
+
658
+ def reset(self, total=None):
659
+ """
660
+ Resets to 0 iterations for repeated use.
661
+
662
+ Consider combining with `leave=True`.
663
+
664
+ Parameters
665
+ ----------
666
+ total : int or float, optional. Total to use for the new bar.
667
+ """
668
+
669
+ def set_description(self, desc=None, refresh=True):
670
+ """
671
+ Set/modify description of the progress bar.
672
+
673
+ Parameters
674
+ ----------
675
+ desc : str, optional
676
+ refresh : bool, optional
677
+ Forces refresh [default: True].
678
+ """
679
+
680
+ def set_postfix(self, ordered_dict=None, refresh=True, **tqdm_kwargs):
681
+ """
682
+ Set/modify postfix (additional stats)
683
+ with automatic formatting based on datatype.
684
+
685
+ Parameters
686
+ ----------
687
+ ordered_dict : dict or OrderedDict, optional
688
+ refresh : bool, optional
689
+ Forces refresh [default: True].
690
+ kwargs : dict, optional
691
+ """
692
+
693
+ @classmethod
694
+ def write(cls, s, file=sys.stdout, end="\n"):
695
+ """Print a message via tqdm (without overlap with bars)."""
696
+
697
+ @property
698
+ def format_dict(self):
699
+ """Public API for read-only member access."""
700
+
701
+ def display(self, msg=None, pos=None):
702
+ """
703
+ Use `self.sp` to display `msg` in the specified `pos`.
704
+
705
+ Consider overloading this function when inheriting to use e.g.:
706
+ `self.some_frontend(**self.format_dict)` instead of `self.sp`.
707
+
708
+ Parameters
709
+ ----------
710
+ msg : str, optional. What to display (default: `repr(self)`).
711
+ pos : int, optional. Position to `moveto`
712
+ (default: `abs(self.pos)`).
713
+ """
714
+
715
+ @classmethod
716
+ @contextmanager
717
+ def wrapattr(cls, stream, method, total=None, bytes=True, **tqdm_kwargs):
718
+ """
719
+ stream : file-like object.
720
+ method : str, "read" or "write". The result of `read()` and
721
+ the first argument of `write()` should have a `len()`.
722
+
723
+ >>> with tqdm.wrapattr(file_obj, "read", total=file_obj.size) as fobj:
724
+ ... while True:
725
+ ... chunk = fobj.read(chunk_size)
726
+ ... if not chunk:
727
+ ... break
728
+ """
729
+
730
+ @classmethod
731
+ def pandas(cls, *targs, **tqdm_kwargs):
732
+ """Registers the current `tqdm` class with `pandas`."""
733
+
734
+ def trange(*args, **tqdm_kwargs):
735
+ """Shortcut for `tqdm(range(*args), **tqdm_kwargs)`."""
736
+
737
+ Convenience Functions
738
+ ~~~~~~~~~~~~~~~~~~~~~
739
+
740
+ .. code:: python
741
+
742
+ def tqdm.contrib.tenumerate(iterable, start=0, total=None,
743
+ tqdm_class=tqdm.auto.tqdm, **tqdm_kwargs):
744
+ """Equivalent of `numpy.ndenumerate` or builtin `enumerate`."""
745
+
746
+ def tqdm.contrib.tzip(iter1, *iter2plus, **tqdm_kwargs):
747
+ """Equivalent of builtin `zip`."""
748
+
749
+ def tqdm.contrib.tmap(function, *sequences, **tqdm_kwargs):
750
+ """Equivalent of builtin `map`."""
751
+
752
+ Submodules
753
+ ~~~~~~~~~~
754
+
755
+ .. code:: python
756
+
757
+ class tqdm.notebook.tqdm(tqdm.tqdm):
758
+ """IPython/Jupyter Notebook widget."""
759
+
760
+ class tqdm.auto.tqdm(tqdm.tqdm):
761
+ """Automatically chooses between `tqdm.notebook` and `tqdm.tqdm`."""
762
+
763
+ class tqdm.asyncio.tqdm(tqdm.tqdm):
764
+ """Asynchronous version."""
765
+ @classmethod
766
+ def as_completed(cls, fs, *, loop=None, timeout=None, total=None,
767
+ **tqdm_kwargs):
768
+ """Wrapper for `asyncio.as_completed`."""
769
+
770
+ class tqdm.gui.tqdm(tqdm.tqdm):
771
+ """Matplotlib GUI version."""
772
+
773
+ class tqdm.tk.tqdm(tqdm.tqdm):
774
+ """Tkinter GUI version."""
775
+
776
+ class tqdm.rich.tqdm(tqdm.tqdm):
777
+ """`rich.progress` version."""
778
+
779
+ class tqdm.keras.TqdmCallback(keras.callbacks.Callback):
780
+ """Keras callback for epoch and batch progress."""
781
+
782
+ class tqdm.dask.TqdmCallback(dask.callbacks.Callback):
783
+ """Dask callback for task progress."""
784
+
785
+
786
+ ``contrib``
787
+ +++++++++++
788
+
789
+ The ``tqdm.contrib`` package also contains experimental modules:
790
+
791
+ - `tqdm.contrib.itertools <https://tqdm.github.io/docs/contrib.itertools/>`_: Thin wrappers around ``itertools``
792
+ - `tqdm.contrib.concurrent <https://tqdm.github.io/docs/contrib.concurrent/>`_: Thin wrappers around ``concurrent.futures``
793
+ - `tqdm.contrib.slack <https://tqdm.github.io/docs/contrib.slack/>`_: Posts to `Slack <https://slack.com>`__ bots
794
+ - `tqdm.contrib.discord <https://tqdm.github.io/docs/contrib.discord/>`_: Posts to `Discord <https://discord.com>`__ bots
795
+ - `tqdm.contrib.telegram <https://tqdm.github.io/docs/contrib.telegram/>`_: Posts to `Telegram <https://telegram.org>`__ bots
796
+ - `tqdm.contrib.bells <https://tqdm.github.io/docs/shortcuts/>`_: Automagically enables all optional features
797
+
798
+ * ``auto``, ``pandas``, ``slack``, ``discord``, ``telegram``
799
+
800
+ .. image:: https://tqdm.github.io/img/screenshot-discord.png
801
+ :alt: Screenshot of `tqdm.contrib.discord` in action
802
+
803
+ Examples and Advanced Usage
804
+ ---------------------------
805
+
806
+ - See the `examples <https://github.com/tqdm/tqdm/tree/master/examples>`__
807
+ folder;
808
+ - import the module and run ``help()``;
809
+ - consult the `wiki <https://github.com/tqdm/tqdm/wiki>`__;
810
+
811
+ * this has an
812
+ `excellent article <https://github.com/tqdm/tqdm/wiki/How-to-make-a-great-Progress-Bar>`__
813
+ on how to make a **great** progress bar;
814
+
815
+ - check out the `slides from PyData London <https://tqdm.github.io/PyData2019/slides.html>`__, or
816
+ - run the |binder-demo|.
817
+
818
+ Description and additional stats
819
+ ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
820
+
821
+ Custom information can be displayed and updated dynamically on ``tqdm`` bars
822
+ with the ``desc`` and ``postfix`` arguments:
823
+
824
+ .. code:: python
825
+
826
+ from tqdm import tqdm, trange
827
+ from random import random, randint
828
+ from time import sleep
829
+
830
+ with trange(10) as t:
831
+ for i in t:
832
+ # Description will be displayed on the left
833
+ t.set_description('GEN %i' % i)
834
+ # Postfix will be displayed on the right,
835
+ # formatted automatically based on argument's datatype
836
+ t.set_postfix(loss=random(), gen=randint(1,999), str='h',
837
+ lst=[1, 2])
838
+ sleep(0.1)
839
+
840
+ with tqdm(total=10, bar_format="{postfix[0]} {postfix[1][value]:>8.2g}",
841
+ postfix=["Batch", {"value": 0}]) as t:
842
+ for i in range(10):
843
+ sleep(0.1)
844
+ t.postfix[1]["value"] = i / 2
845
+ t.update()
846
+
847
+ Points to remember when using ``{postfix[...]}`` in the ``bar_format`` string:
848
+
849
+ - ``postfix`` also needs to be passed as an initial argument in a compatible
850
+ format, and
851
+ - ``postfix`` will be auto-converted to a string if it is a ``dict``-like
852
+ object. To prevent this behaviour, insert an extra item into the dictionary
853
+ where the key is not a string.
854
+
855
+ Additional ``bar_format`` parameters may also be defined by overriding
856
+ ``format_dict``, and the bar itself may be modified using ``ascii``:
857
+
858
+ .. code:: python
859
+
860
+ from tqdm import tqdm
861
+ class TqdmExtraFormat(tqdm):
862
+ """Provides a `total_time` format parameter"""
863
+ @property
864
+ def format_dict(self):
865
+ d = super().format_dict
866
+ total_time = d["elapsed"] * (d["total"] or 0) / max(d["n"], 1)
867
+ d.update(total_time=self.format_interval(total_time) + " in total")
868
+ return d
869
+
870
+ for i in TqdmExtraFormat(
871
+ range(9), ascii=" .oO0",
872
+ bar_format="{total_time}: {percentage:.0f}%|{bar}{r_bar}"):
873
+ if i == 4:
874
+ break
875
+
876
+ .. code::
877
+
878
+ 00:00 in total: 44%|0000. | 4/9 [00:00<00:00, 962.93it/s]
879
+
880
+ Note that ``{bar}`` also supports a format specifier ``[width][type]``.
881
+
882
+ - ``width``
883
+
884
+ * unspecified (default): automatic to fill ``ncols``
885
+ * ``int >= 0``: fixed width overriding ``ncols`` logic
886
+ * ``int < 0``: subtract from the automatic default
887
+
888
+ - ``type``
889
+
890
+ * ``a``: ascii (``ascii=True`` override)
891
+ * ``u``: unicode (``ascii=False`` override)
892
+ * ``b``: blank (``ascii=" "`` override)
893
+
894
+ This means a fixed bar with right-justified text may be created by using:
895
+ ``bar_format="{l_bar}{bar:10}|{bar:-10b}right-justified"``
896
+
897
+ Nested progress bars
898
+ ~~~~~~~~~~~~~~~~~~~~
899
+
900
+ ``tqdm`` supports nested progress bars. Here's an example:
901
+
902
+ .. code:: python
903
+
904
+ from tqdm.auto import trange
905
+ from time import sleep
906
+
907
+ for i in trange(4, desc='1st loop'):
908
+ for j in trange(5, desc='2nd loop'):
909
+ for k in trange(50, desc='3rd loop', leave=False):
910
+ sleep(0.01)
911
+
912
+ For manual control over positioning (e.g. for multi-processing use),
913
+ you may specify ``position=n`` where ``n=0`` for the outermost bar,
914
+ ``n=1`` for the next, and so on.
915
+ However, it's best to check if ``tqdm`` can work without manual ``position``
916
+ first.
917
+
918
+ .. code:: python
919
+
920
+ from time import sleep
921
+ from tqdm import trange, tqdm
922
+ from multiprocessing import Pool, RLock, freeze_support
923
+
924
+ L = list(range(9))
925
+
926
+ def progresser(n):
927
+ interval = 0.001 / (n + 2)
928
+ total = 5000
929
+ text = f"#{n}, est. {interval * total:<04.2}s"
930
+ for _ in trange(total, desc=text, position=n):
931
+ sleep(interval)
932
+
933
+ if __name__ == '__main__':
934
+ freeze_support() # for Windows support
935
+ tqdm.set_lock(RLock()) # for managing output contention
936
+ p = Pool(initializer=tqdm.set_lock, initargs=(tqdm.get_lock(),))
937
+ p.map(progresser, L)
938
+
939
+ Note that in Python 3, ``tqdm.write`` is thread-safe:
940
+
941
+ .. code:: python
942
+
943
+ from time import sleep
944
+ from tqdm import tqdm, trange
945
+ from concurrent.futures import ThreadPoolExecutor
946
+
947
+ L = list(range(9))
948
+
949
+ def progresser(n):
950
+ interval = 0.001 / (n + 2)
951
+ total = 5000
952
+ text = f"#{n}, est. {interval * total:<04.2}s"
953
+ for _ in trange(total, desc=text):
954
+ sleep(interval)
955
+ if n == 6:
956
+ tqdm.write("n == 6 completed.")
957
+ tqdm.write("`tqdm.write()` is thread-safe in py3!")
958
+
959
+ if __name__ == '__main__':
960
+ with ThreadPoolExecutor() as p:
961
+ p.map(progresser, L)
962
+
963
+ Hooks and callbacks
964
+ ~~~~~~~~~~~~~~~~~~~
965
+
966
+ ``tqdm`` can easily support callbacks/hooks and manual updates.
967
+ Here's an example with ``urllib``:
968
+
969
+ **``urllib.urlretrieve`` documentation**
970
+
971
+ | [...]
972
+ | If present, the hook function will be called once
973
+ | on establishment of the network connection and once after each block read
974
+ | thereafter. The hook will be passed three arguments; a count of blocks
975
+ | transferred so far, a block size in bytes, and the total size of the file.
976
+ | [...]
977
+
978
+ .. code:: python
979
+
980
+ import urllib, os
981
+ from tqdm import tqdm
982
+ urllib = getattr(urllib, 'request', urllib)
983
+
984
+ class TqdmUpTo(tqdm):
985
+ """Provides `update_to(n)` which uses `tqdm.update(delta_n)`."""
986
+ def update_to(self, b=1, bsize=1, tsize=None):
987
+ """
988
+ b : int, optional
989
+ Number of blocks transferred so far [default: 1].
990
+ bsize : int, optional
991
+ Size of each block (in tqdm units) [default: 1].
992
+ tsize : int, optional
993
+ Total size (in tqdm units). If [default: None] remains unchanged.
994
+ """
995
+ if tsize is not None:
996
+ self.total = tsize
997
+ return self.update(b * bsize - self.n) # also sets self.n = b * bsize
998
+
999
+ eg_link = "https://cgi.cdcl.ml/matryoshka.zip"
1000
+ with TqdmUpTo(unit='B', unit_scale=True, unit_divisor=1024, miniters=1,
1001
+ desc=eg_link.split('/')[-1]) as t: # all optional kwargs
1002
+ urllib.urlretrieve(eg_link, filename=os.devnull,
1003
+ reporthook=t.update_to, data=None)
1004
+ t.total = t.n
1005
+
1006
+ Inspired by `twine#242 <https://github.com/pypa/twine/pull/242>`__.
1007
+ Functional alternative in
1008
+ `examples/tqdm_wget.py <https://github.com/tqdm/tqdm/blob/master/examples/tqdm_wget.py>`__.
1009
+
1010
+ It is recommend to use ``miniters=1`` whenever there is potentially
1011
+ large differences in iteration speed (e.g. downloading a file over
1012
+ a patchy connection).
1013
+
1014
+ **Wrapping read/write methods**
1015
+
1016
+ To measure throughput through a file-like object's ``read`` or ``write``
1017
+ methods, use ``CallbackIOWrapper``:
1018
+
1019
+ .. code:: python
1020
+
1021
+ from tqdm.auto import tqdm
1022
+ from tqdm.utils import CallbackIOWrapper
1023
+
1024
+ with tqdm(total=file_obj.size,
1025
+ unit='B', unit_scale=True, unit_divisor=1024) as t:
1026
+ fobj = CallbackIOWrapper(t.update, file_obj, "read")
1027
+ while True:
1028
+ chunk = fobj.read(chunk_size)
1029
+ if not chunk:
1030
+ break
1031
+ t.reset()
1032
+ # ... continue to use `t` for something else
1033
+
1034
+ Alternatively, use the even simpler ``wrapattr`` convenience function,
1035
+ which would condense both the ``urllib`` and ``CallbackIOWrapper`` examples
1036
+ down to:
1037
+
1038
+ .. code:: python
1039
+
1040
+ import urllib, os
1041
+ from tqdm import tqdm
1042
+
1043
+ eg_link = "https://cgi.cdcl.ml/matryoshka.zip"
1044
+ response = getattr(urllib, 'request', urllib).urlopen(eg_link)
1045
+ with tqdm.wrapattr(open(os.devnull, "wb"), "write",
1046
+ miniters=1, desc=eg_link.split('/')[-1],
1047
+ total=getattr(response, 'length', None)) as fout:
1048
+ for chunk in response:
1049
+ fout.write(chunk)
1050
+
1051
+ The ``requests`` equivalent is nearly identical:
1052
+
1053
+ .. code:: python
1054
+
1055
+ import requests, os
1056
+ from tqdm import tqdm
1057
+
1058
+ eg_link = "https://cgi.cdcl.ml/matryoshka.zip"
1059
+ response = requests.get(eg_link, stream=True)
1060
+ with tqdm.wrapattr(open(os.devnull, "wb"), "write",
1061
+ miniters=1, desc=eg_link.split('/')[-1],
1062
+ total=int(response.headers.get('content-length', 0))) as fout:
1063
+ for chunk in response.iter_content(chunk_size=4096):
1064
+ fout.write(chunk)
1065
+
1066
+ **Custom callback**
1067
+
1068
+ ``tqdm`` is known for intelligently skipping unnecessary displays. To make a
1069
+ custom callback take advantage of this, simply use the return value of
1070
+ ``update()``. This is set to ``True`` if a ``display()`` was triggered.
1071
+
1072
+ .. code:: python
1073
+
1074
+ from tqdm.auto import tqdm as std_tqdm
1075
+
1076
+ def external_callback(*args, **kwargs):
1077
+ ...
1078
+
1079
+ class TqdmExt(std_tqdm):
1080
+ def update(self, n=1):
1081
+ displayed = super().update(n)
1082
+ if displayed:
1083
+ external_callback(**self.format_dict)
1084
+ return displayed
1085
+
1086
+ ``asyncio``
1087
+ ~~~~~~~~~~~
1088
+
1089
+ Note that ``break`` isn't currently caught by asynchronous iterators.
1090
+ This means that ``tqdm`` cannot clean up after itself in this case:
1091
+
1092
+ .. code:: python
1093
+
1094
+ from tqdm.asyncio import tqdm
1095
+
1096
+ async for i in tqdm(range(9)):
1097
+ if i == 2:
1098
+ break
1099
+
1100
+ Instead, either call ``pbar.close()`` manually or use the context manager syntax:
1101
+
1102
+ .. code:: python
1103
+
1104
+ from tqdm.asyncio import tqdm
1105
+
1106
+ with tqdm(range(9)) as pbar:
1107
+ async for i in pbar:
1108
+ if i == 2:
1109
+ break
1110
+
1111
+ Pandas Integration
1112
+ ~~~~~~~~~~~~~~~~~~
1113
+
1114
+ Due to popular demand we've added support for ``pandas`` -- here's an example
1115
+ for ``DataFrame.progress_apply`` and ``DataFrameGroupBy.progress_apply``:
1116
+
1117
+ .. code:: python
1118
+
1119
+ import pandas as pd
1120
+ import numpy as np
1121
+ from tqdm import tqdm
1122
+
1123
+ df = pd.DataFrame(np.random.randint(0, 100, (100000, 6)))
1124
+
1125
+ # Register `pandas.progress_apply` and `pandas.Series.map_apply` with `tqdm`
1126
+ # (can use `tqdm.gui.tqdm`, `tqdm.notebook.tqdm`, optional kwargs, etc.)
1127
+ tqdm.pandas(desc="my bar!")
1128
+
1129
+ # Now you can use `progress_apply` instead of `apply`
1130
+ # and `progress_map` instead of `map`
1131
+ df.progress_apply(lambda x: x**2)
1132
+ # can also groupby:
1133
+ # df.groupby(0).progress_apply(lambda x: x**2)
1134
+
1135
+ In case you're interested in how this works (and how to modify it for your
1136
+ own callbacks), see the
1137
+ `examples <https://github.com/tqdm/tqdm/tree/master/examples>`__
1138
+ folder or import the module and run ``help()``.
1139
+
1140
+ Keras Integration
1141
+ ~~~~~~~~~~~~~~~~~
1142
+
1143
+ A ``keras`` callback is also available:
1144
+
1145
+ .. code:: python
1146
+
1147
+ from tqdm.keras import TqdmCallback
1148
+
1149
+ ...
1150
+
1151
+ model.fit(..., verbose=0, callbacks=[TqdmCallback()])
1152
+
1153
+ Dask Integration
1154
+ ~~~~~~~~~~~~~~~~
1155
+
1156
+ A ``dask`` callback is also available:
1157
+
1158
+ .. code:: python
1159
+
1160
+ from tqdm.dask import TqdmCallback
1161
+
1162
+ with TqdmCallback(desc="compute"):
1163
+ ...
1164
+ arr.compute()
1165
+
1166
+ # or use callback globally
1167
+ cb = TqdmCallback(desc="global")
1168
+ cb.register()
1169
+ arr.compute()
1170
+
1171
+ IPython/Jupyter Integration
1172
+ ~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1173
+
1174
+ IPython/Jupyter is supported via the ``tqdm.notebook`` submodule:
1175
+
1176
+ .. code:: python
1177
+
1178
+ from tqdm.notebook import trange, tqdm
1179
+ from time import sleep
1180
+
1181
+ for i in trange(3, desc='1st loop'):
1182
+ for j in tqdm(range(100), desc='2nd loop'):
1183
+ sleep(0.01)
1184
+
1185
+ In addition to ``tqdm`` features, the submodule provides a native Jupyter
1186
+ widget (compatible with IPython v1-v4 and Jupyter), fully working nested bars
1187
+ and colour hints (blue: normal, green: completed, red: error/interrupt,
1188
+ light blue: no ETA); as demonstrated below.
1189
+
1190
+ |Screenshot-Jupyter1|
1191
+ |Screenshot-Jupyter2|
1192
+ |Screenshot-Jupyter3|
1193
+
1194
+ The ``notebook`` version supports percentage or pixels for overall width
1195
+ (e.g.: ``ncols='100%'`` or ``ncols='480px'``).
1196
+
1197
+ It is also possible to let ``tqdm`` automatically choose between
1198
+ console or notebook versions by using the ``autonotebook`` submodule:
1199
+
1200
+ .. code:: python
1201
+
1202
+ from tqdm.autonotebook import tqdm
1203
+ tqdm.pandas()
1204
+
1205
+ Note that this will issue a ``TqdmExperimentalWarning`` if run in a notebook
1206
+ since it is not meant to be possible to distinguish between ``jupyter notebook``
1207
+ and ``jupyter console``. Use ``auto`` instead of ``autonotebook`` to suppress
1208
+ this warning.
1209
+
1210
+ Note that notebooks will display the bar in the cell where it was created.
1211
+ This may be a different cell from the one where it is used.
1212
+ If this is not desired, either
1213
+
1214
+ - delay the creation of the bar to the cell where it must be displayed, or
1215
+ - create the bar with ``display=False``, and in a later cell call
1216
+ ``display(bar.container)``:
1217
+
1218
+ .. code:: python
1219
+
1220
+ from tqdm.notebook import tqdm
1221
+ pbar = tqdm(..., display=False)
1222
+
1223
+ .. code:: python
1224
+
1225
+ # different cell
1226
+ display(pbar.container)
1227
+
1228
+ The ``keras`` callback has a ``display()`` method which can be used likewise:
1229
+
1230
+ .. code:: python
1231
+
1232
+ from tqdm.keras import TqdmCallback
1233
+ cbk = TqdmCallback(display=False)
1234
+
1235
+ .. code:: python
1236
+
1237
+ # different cell
1238
+ cbk.display()
1239
+ model.fit(..., verbose=0, callbacks=[cbk])
1240
+
1241
+ Another possibility is to have a single bar (near the top of the notebook)
1242
+ which is constantly re-used (using ``reset()`` rather than ``close()``).
1243
+ For this reason, the notebook version (unlike the CLI version) does not
1244
+ automatically call ``close()`` upon ``Exception``.
1245
+
1246
+ .. code:: python
1247
+
1248
+ from tqdm.notebook import tqdm
1249
+ pbar = tqdm()
1250
+
1251
+ .. code:: python
1252
+
1253
+ # different cell
1254
+ iterable = range(100)
1255
+ pbar.reset(total=len(iterable)) # initialise with new `total`
1256
+ for i in iterable:
1257
+ pbar.update()
1258
+ pbar.refresh() # force print final status but don't `close()`
1259
+
1260
+ Custom Integration
1261
+ ~~~~~~~~~~~~~~~~~~
1262
+
1263
+ To change the default arguments (such as making ``dynamic_ncols=True``),
1264
+ simply use built-in Python magic:
1265
+
1266
+ .. code:: python
1267
+
1268
+ from functools import partial
1269
+ from tqdm import tqdm as std_tqdm
1270
+ tqdm = partial(std_tqdm, dynamic_ncols=True)
1271
+
1272
+ For further customisation,
1273
+ ``tqdm`` may be inherited from to create custom callbacks (as with the
1274
+ ``TqdmUpTo`` example `above <#hooks-and-callbacks>`__) or for custom frontends
1275
+ (e.g. GUIs such as notebook or plotting packages). In the latter case:
1276
+
1277
+ 1. ``def __init__()`` to call ``super().__init__(..., gui=True)`` to disable
1278
+ terminal ``status_printer`` creation.
1279
+ 2. Redefine: ``close()``, ``clear()``, ``display()``.
1280
+
1281
+ Consider overloading ``display()`` to use e.g.
1282
+ ``self.frontend(**self.format_dict)`` instead of ``self.sp(repr(self))``.
1283
+
1284
+ Some submodule examples of inheritance:
1285
+
1286
+ - `tqdm/notebook.py <https://github.com/tqdm/tqdm/blob/master/tqdm/notebook.py>`__
1287
+ - `tqdm/gui.py <https://github.com/tqdm/tqdm/blob/master/tqdm/gui.py>`__
1288
+ - `tqdm/tk.py <https://github.com/tqdm/tqdm/blob/master/tqdm/tk.py>`__
1289
+ - `tqdm/contrib/slack.py <https://github.com/tqdm/tqdm/blob/master/tqdm/contrib/slack.py>`__
1290
+ - `tqdm/contrib/discord.py <https://github.com/tqdm/tqdm/blob/master/tqdm/contrib/discord.py>`__
1291
+ - `tqdm/contrib/telegram.py <https://github.com/tqdm/tqdm/blob/master/tqdm/contrib/telegram.py>`__
1292
+
1293
+ Dynamic Monitor/Meter
1294
+ ~~~~~~~~~~~~~~~~~~~~~
1295
+
1296
+ You can use a ``tqdm`` as a meter which is not monotonically increasing.
1297
+ This could be because ``n`` decreases (e.g. a CPU usage monitor) or ``total``
1298
+ changes.
1299
+
1300
+ One example would be recursively searching for files. The ``total`` is the
1301
+ number of objects found so far, while ``n`` is the number of those objects which
1302
+ are files (rather than folders):
1303
+
1304
+ .. code:: python
1305
+
1306
+ from tqdm import tqdm
1307
+ import os.path
1308
+
1309
+ def find_files_recursively(path, show_progress=True):
1310
+ files = []
1311
+ # total=1 assumes `path` is a file
1312
+ t = tqdm(total=1, unit="file", disable=not show_progress)
1313
+ if not os.path.exists(path):
1314
+ raise IOError("Cannot find:" + path)
1315
+
1316
+ def append_found_file(f):
1317
+ files.append(f)
1318
+ t.update()
1319
+
1320
+ def list_found_dir(path):
1321
+ """returns os.listdir(path) assuming os.path.isdir(path)"""
1322
+ listing = os.listdir(path)
1323
+ # subtract 1 since a "file" we found was actually this directory
1324
+ t.total += len(listing) - 1
1325
+ # fancy way to give info without forcing a refresh
1326
+ t.set_postfix(dir=path[-10:], refresh=False)
1327
+ t.update(0) # may trigger a refresh
1328
+ return listing
1329
+
1330
+ def recursively_search(path):
1331
+ if os.path.isdir(path):
1332
+ for f in list_found_dir(path):
1333
+ recursively_search(os.path.join(path, f))
1334
+ else:
1335
+ append_found_file(path)
1336
+
1337
+ recursively_search(path)
1338
+ t.set_postfix(dir=path)
1339
+ t.close()
1340
+ return files
1341
+
1342
+ Using ``update(0)`` is a handy way to let ``tqdm`` decide when to trigger a
1343
+ display refresh to avoid console spamming.
1344
+
1345
+ Writing messages
1346
+ ~~~~~~~~~~~~~~~~
1347
+
1348
+ This is a work in progress (see
1349
+ `#737 <https://github.com/tqdm/tqdm/issues/737>`__).
1350
+
1351
+ Since ``tqdm`` uses a simple printing mechanism to display progress bars,
1352
+ you should not write any message in the terminal using ``print()`` while
1353
+ a progress bar is open.
1354
+
1355
+ To write messages in the terminal without any collision with ``tqdm`` bar
1356
+ display, a ``.write()`` method is provided:
1357
+
1358
+ .. code:: python
1359
+
1360
+ from tqdm.auto import tqdm, trange
1361
+ from time import sleep
1362
+
1363
+ bar = trange(10)
1364
+ for i in bar:
1365
+ # Print using tqdm class method .write()
1366
+ sleep(0.1)
1367
+ if not (i % 3):
1368
+ tqdm.write("Done task %i" % i)
1369
+ # Can also use bar.write()
1370
+
1371
+ By default, this will print to standard output ``sys.stdout``. but you can
1372
+ specify any file-like object using the ``file`` argument. For example, this
1373
+ can be used to redirect the messages writing to a log file or class.
1374
+
1375
+ Redirecting writing
1376
+ ~~~~~~~~~~~~~~~~~~~
1377
+
1378
+ If using a library that can print messages to the console, editing the library
1379
+ by replacing ``print()`` with ``tqdm.write()`` may not be desirable.
1380
+ In that case, redirecting ``sys.stdout`` to ``tqdm.write()`` is an option.
1381
+
1382
+ To redirect ``sys.stdout``, create a file-like class that will write
1383
+ any input string to ``tqdm.write()``, and supply the arguments
1384
+ ``file=sys.stdout, dynamic_ncols=True``.
1385
+
1386
+ A reusable canonical example is given below:
1387
+
1388
+ .. code:: python
1389
+
1390
+ from time import sleep
1391
+ import contextlib
1392
+ import sys
1393
+ from tqdm import tqdm
1394
+ from tqdm.contrib import DummyTqdmFile
1395
+
1396
+
1397
+ @contextlib.contextmanager
1398
+ def std_out_err_redirect_tqdm():
1399
+ orig_out_err = sys.stdout, sys.stderr
1400
+ try:
1401
+ sys.stdout, sys.stderr = map(DummyTqdmFile, orig_out_err)
1402
+ yield orig_out_err[0]
1403
+ # Relay exceptions
1404
+ except Exception as exc:
1405
+ raise exc
1406
+ # Always restore sys.stdout/err if necessary
1407
+ finally:
1408
+ sys.stdout, sys.stderr = orig_out_err
1409
+
1410
+ def some_fun(i):
1411
+ print("Fee, fi, fo,".split()[i])
1412
+
1413
+ # Redirect stdout to tqdm.write() (don't forget the `as save_stdout`)
1414
+ with std_out_err_redirect_tqdm() as orig_stdout:
1415
+ # tqdm needs the original stdout
1416
+ # and dynamic_ncols=True to autodetect console width
1417
+ for i in tqdm(range(3), file=orig_stdout, dynamic_ncols=True):
1418
+ sleep(.5)
1419
+ some_fun(i)
1420
+
1421
+ # After the `with`, printing is restored
1422
+ print("Done!")
1423
+
1424
+ Redirecting ``logging``
1425
+ ~~~~~~~~~~~~~~~~~~~~~~~
1426
+
1427
+ Similar to ``sys.stdout``/``sys.stderr`` as detailed above, console ``logging``
1428
+ may also be redirected to ``tqdm.write()``.
1429
+
1430
+ Warning: if also redirecting ``sys.stdout``/``sys.stderr``, make sure to
1431
+ redirect ``logging`` first if needed.
1432
+
1433
+ Helper methods are available in ``tqdm.contrib.logging``. For example:
1434
+
1435
+ .. code:: python
1436
+
1437
+ import logging
1438
+ from tqdm import trange
1439
+ from tqdm.contrib.logging import logging_redirect_tqdm
1440
+
1441
+ LOG = logging.getLogger(__name__)
1442
+
1443
+ if __name__ == '__main__':
1444
+ logging.basicConfig(level=logging.INFO)
1445
+ with logging_redirect_tqdm():
1446
+ for i in trange(9):
1447
+ if i == 4:
1448
+ LOG.info("console logging redirected to `tqdm.write()`")
1449
+ # logging restored
1450
+
1451
+ Monitoring thread, intervals and miniters
1452
+ ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1453
+
1454
+ ``tqdm`` implements a few tricks to increase efficiency and reduce overhead.
1455
+
1456
+ - Avoid unnecessary frequent bar refreshing: ``mininterval`` defines how long
1457
+ to wait between each refresh. ``tqdm`` always gets updated in the background,
1458
+ but it will display only every ``mininterval``.
1459
+ - Reduce number of calls to check system clock/time.
1460
+ - ``mininterval`` is more intuitive to configure than ``miniters``.
1461
+ A clever adjustment system ``dynamic_miniters`` will automatically adjust
1462
+ ``miniters`` to the amount of iterations that fit into time ``mininterval``.
1463
+ Essentially, ``tqdm`` will check if it's time to print without actually
1464
+ checking time. This behaviour can be still be bypassed by manually setting
1465
+ ``miniters``.
1466
+
1467
+ However, consider a case with a combination of fast and slow iterations.
1468
+ After a few fast iterations, ``dynamic_miniters`` will set ``miniters`` to a
1469
+ large number. When iteration rate subsequently slows, ``miniters`` will
1470
+ remain large and thus reduce display update frequency. To address this:
1471
+
1472
+ - ``maxinterval`` defines the maximum time between display refreshes.
1473
+ A concurrent monitoring thread checks for overdue updates and forces one
1474
+ where necessary.
1475
+
1476
+ The monitoring thread should not have a noticeable overhead, and guarantees
1477
+ updates at least every 10 seconds by default.
1478
+ This value can be directly changed by setting the ``monitor_interval`` of
1479
+ any ``tqdm`` instance (i.e. ``t = tqdm.tqdm(...); t.monitor_interval = 2``).
1480
+ The monitor thread may be disabled application-wide by setting
1481
+ ``tqdm.tqdm.monitor_interval = 0`` before instantiation of any ``tqdm`` bar.
1482
+
1483
+
1484
+ Merch
1485
+ -----
1486
+
1487
+ You can buy `tqdm branded merch <https://tqdm.github.io/merch>`__ now!
1488
+
1489
+ Contributions
1490
+ -------------
1491
+
1492
+ |GitHub-Commits| |GitHub-Issues| |GitHub-PRs| |OpenHub-Status| |GitHub-Contributions| |CII Best Practices|
1493
+
1494
+ All source code is hosted on `GitHub <https://github.com/tqdm/tqdm>`__.
1495
+ Contributions are welcome.
1496
+
1497
+ See the
1498
+ `CONTRIBUTING <https://github.com/tqdm/tqdm/blob/master/CONTRIBUTING.md>`__
1499
+ file for more information.
1500
+
1501
+ Developers who have contributed more that 5 *loc* (surviving lines of code):
1502
+
1503
+ |git-fame|
1504
+
1505
+ Honourable mentions:
1506
+
1507
+ - Casper da Costa-Luis `casperdcl <https://github.com/casperdcl>`__ primary maintainer |Gift-Casper|
1508
+ - Stephen Larroque `lrq3000 <https://github.com/lrq3000>`__ maintainer
1509
+ - Hadrien Mary `hadim <https://github.com/hadim>`__ maintainer
1510
+ - Mikhail Korobov `kmike <https://github.com/kmike>`__ maintainer
1511
+ - Noam Yorav-Raphael `noamraph <https://github.com/noamraph>`__ original author
1512
+
1513
+ Ports to Other Languages
1514
+ ~~~~~~~~~~~~~~~~~~~~~~~~
1515
+
1516
+ A list is available on
1517
+ `this wiki page <https://github.com/tqdm/tqdm/wiki/tqdm-ports>`__.
1518
+
1519
+
1520
+ LICENCE
1521
+ -------
1522
+
1523
+ Open Source (OSI approved): |LICENCE|
1524
+
1525
+ Citation information: |DOI|
1526
+
1527
+ |README-Hits| (Since 19 May 2016)
1528
+
1529
+ .. |Logo| image:: https://tqdm.github.io/img/logo.gif
1530
+ .. |Screenshot| image:: https://tqdm.github.io/img/tqdm.gif
1531
+ .. |Video| image:: https://tqdm.github.io/img/video.jpg
1532
+ :target: https://tqdm.github.io/video
1533
+ .. |Slides| image:: https://tqdm.github.io/img/slides.jpg
1534
+ :target: https://tqdm.github.io/PyData2019/slides.html
1535
+ .. |Merch| image:: https://tqdm.github.io/img/merch.jpg
1536
+ :target: https://tqdm.github.io/merch
1537
+ .. |Build-Status| image:: https://img.shields.io/github/actions/workflow/status/tqdm/tqdm/test.yml?branch=master&label=tqdm&logo=GitHub
1538
+ :target: https://github.com/tqdm/tqdm/actions/workflows/test.yml
1539
+ .. |Coverage-Status| image:: https://img.shields.io/coveralls/github/tqdm/tqdm/master?logo=coveralls
1540
+ :target: https://coveralls.io/github/tqdm/tqdm
1541
+ .. |Branch-Coverage-Status| image:: https://codecov.io/gh/tqdm/tqdm/branch/master/graph/badge.svg
1542
+ :target: https://codecov.io/gh/tqdm/tqdm
1543
+ .. |Codacy-Grade| image:: https://app.codacy.com/project/badge/Grade/3f965571598f44549c7818f29cdcf177
1544
+ :target: https://app.codacy.com/gh/tqdm/tqdm/dashboard
1545
+ .. |CII Best Practices| image:: https://bestpractices.coreinfrastructure.org/projects/3264/badge
1546
+ :target: https://bestpractices.coreinfrastructure.org/projects/3264
1547
+ .. |GitHub-Status| image:: https://img.shields.io/github/tag/tqdm/tqdm.svg?maxAge=86400&logo=github&logoColor=white
1548
+ :target: https://github.com/tqdm/tqdm/releases
1549
+ .. |GitHub-Forks| image:: https://img.shields.io/github/forks/tqdm/tqdm.svg?logo=github&logoColor=white
1550
+ :target: https://github.com/tqdm/tqdm/network
1551
+ .. |GitHub-Stars| image:: https://img.shields.io/github/stars/tqdm/tqdm.svg?logo=github&logoColor=white
1552
+ :target: https://github.com/tqdm/tqdm/stargazers
1553
+ .. |GitHub-Commits| image:: https://img.shields.io/github/commit-activity/y/tqdm/tqdm.svg?logo=git&logoColor=white
1554
+ :target: https://github.com/tqdm/tqdm/graphs/commit-activity
1555
+ .. |GitHub-Issues| image:: https://img.shields.io/github/issues-closed/tqdm/tqdm.svg?logo=github&logoColor=white
1556
+ :target: https://github.com/tqdm/tqdm/issues?q=
1557
+ .. |GitHub-PRs| image:: https://img.shields.io/github/issues-pr-closed/tqdm/tqdm.svg?logo=github&logoColor=white
1558
+ :target: https://github.com/tqdm/tqdm/pulls
1559
+ .. |GitHub-Contributions| image:: https://img.shields.io/github/contributors/tqdm/tqdm.svg?logo=github&logoColor=white
1560
+ :target: https://github.com/tqdm/tqdm/graphs/contributors
1561
+ .. |GitHub-Updated| image:: https://img.shields.io/github/last-commit/tqdm/tqdm/master.svg?logo=github&logoColor=white&label=pushed
1562
+ :target: https://github.com/tqdm/tqdm/pulse
1563
+ .. |git-fame| image:: https://git-fame.cdcl.ml/gh/tqdm/tqdm?min=5&w=1&M=1&C=1&excl=(png|gif|jpg)$&enum=1
1564
+ :alt: git-fame.cdcl.ml/gh/tqdm/tqdm
1565
+ :target: https://git-fame.cdcl.ml/gh/tqdm/tqdm?w=1&M=1&C=1&excl=(png|gif|jpg)$&enum=1
1566
+ .. |Gift-Casper| image:: https://img.shields.io/badge/sponsor-casper-ff69b4.svg
1567
+ :target: https://cdcl.ml/sponsor
1568
+ .. |Versions| image:: https://img.shields.io/pypi/v/tqdm.svg
1569
+ :target: https://tqdm.github.io/releases
1570
+ .. |PyPI-Downloads| image:: https://static.pepy.tech/personalized-badge/tqdm?left_text=downloads%2Fmonth
1571
+ :target: https://pepy.tech/project/tqdm
1572
+ .. |Py-Versions| image:: https://img.shields.io/pypi/pyversions/tqdm.svg?logo=python&logoColor=white
1573
+ :target: https://pypi.org/project/tqdm
1574
+ .. |Conda-Forge-Status| image:: https://img.shields.io/conda/v/conda-forge/tqdm.svg?label=conda-forge&logo=conda-forge
1575
+ :target: https://anaconda.org/conda-forge/tqdm
1576
+ .. |Snapcraft| image:: https://img.shields.io/badge/snap-install-82BEA0.svg?logo=snapcraft
1577
+ :target: https://snapcraft.io/tqdm
1578
+ .. |Docker| image:: https://img.shields.io/badge/docker-pull-blue.svg?logo=docker&logoColor=white
1579
+ :target: https://hub.docker.com/r/tqdm/tqdm
1580
+ .. |Libraries-Rank| image:: https://img.shields.io/librariesio/sourcerank/pypi/tqdm.svg?logo=koding&logoColor=white
1581
+ :target: https://libraries.io/pypi/tqdm
1582
+ .. |Libraries-Dependents| image:: https://img.shields.io/librariesio/dependent-repos/pypi/tqdm.svg?logo=koding&logoColor=white
1583
+ :target: https://github.com/tqdm/tqdm/network/dependents
1584
+ .. |OpenHub-Status| image:: https://www.openhub.net/p/tqdm/widgets/project_thin_badge?format=gif
1585
+ :target: https://www.openhub.net/p/tqdm?ref=Thin+badge
1586
+ .. |awesome-python| image:: https://awesome.re/mentioned-badge.svg
1587
+ :target: https://github.com/vinta/awesome-python
1588
+ .. |LICENCE| image:: https://img.shields.io/pypi/l/tqdm.svg
1589
+ :target: https://raw.githubusercontent.com/tqdm/tqdm/master/LICENCE
1590
+ .. |DOI| image:: https://img.shields.io/badge/DOI-10.5281/zenodo.595120-blue.svg
1591
+ :target: https://doi.org/10.5281/zenodo.595120
1592
+ .. |colab-demo| image:: https://colab.research.google.com/assets/colab-badge.svg
1593
+ :target: https://colab.research.google.com/github/tqdm/tqdm/blob/master/DEMO.ipynb
1594
+ .. |binder-demo| image:: https://mybinder.org/badge_logo.svg
1595
+ :target: https://mybinder.org/v2/gh/tqdm/tqdm/master?filepath=DEMO.ipynb
1596
+ .. |Screenshot-Jupyter1| image:: https://tqdm.github.io/img/jupyter-1.gif
1597
+ .. |Screenshot-Jupyter2| image:: https://tqdm.github.io/img/jupyter-2.gif
1598
+ .. |Screenshot-Jupyter3| image:: https://tqdm.github.io/img/jupyter-3.gif
1599
+ .. |README-Hits| image:: https://cgi.cdcl.ml/hits?q=tqdm&style=social&r=https://github.com/tqdm/tqdm&l=https://tqdm.github.io/img/favicon.png&f=https://tqdm.github.io/img/logo.gif
1600
+ :target: https://cgi.cdcl.ml/hits?q=tqdm&a=plot&r=https://github.com/tqdm/tqdm&l=https://tqdm.github.io/img/favicon.png&f=https://tqdm.github.io/img/logo.gif&style=social
.cache/pip/http-v2/c/1/6/c/6/c16c6c635e568e65136b95a15ea17f91b43799aeb0a7e80b55d7a898 ADDED
Binary file (1.25 kB). View file
 
.cache/pip/http-v2/c/d/5/d/e/cd5de44b899cbe1869765c21b55cffc53c0c0ffa9d3c6f1fd40a42a2 ADDED
Binary file (1.9 kB). View file
 
BUSI_with_classes/.DS_Store ADDED
Binary file (6.15 kB). View file
 
BUSI_with_classes/pipeline_check.json ADDED
The diff for this file is too large to render. See raw diff
 
MODEL_RUN_COMMANDS.md ADDED
@@ -0,0 +1,121 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ # Per-model run commands — `foldsrunner_simplified_after_ablation.py`
2
+
3
+ Base config is already set in the file: `STRATEGIES=[2,3]`, 10 phases (`PHASE_EXECUTION_MODE="auto"`),
4
+ 100% data, `BATCH_SIZE=48`, `NUM_WORKERS=12`, `STRATEGY_2_MAX_EPOCHS=100`, `STRATEGY_3_MAX_EPOCHS=120`,
5
+ `RUN_OPTUNA=False`, `STRATEGY2_CHECKPOINT_MODE="best"` (strategy 3 uses the strategy-2 base trained in
6
+ the same run — no checkpoint wiring needed).
7
+
8
+ **Validated at 128px:** DPT+ViT-tiny and UPerNet+Swin-tiny were dropped (weights locked to 224px) and
9
+ replaced with **PVTv2 + UPerNet** (b1 and b2), which run natively at 128px. Re-run
10
+ `python validate_models.py` to confirm all 6 pass on your box before launching.
11
+
12
+ ---
13
+
14
+ ## 1. SegFormer-B0 (transformer → SegFormer params, proj 192)
15
+
16
+ ```bash
17
+ cd /workspace
18
+ sed -i -E \
19
+ -e 's/^SMP_ENCODER_NAME = .*/SMP_ENCODER_NAME = "mit_b0"/' \
20
+ -e 's/^SMP_DECODER_TYPE = .*/SMP_DECODER_TYPE = "Segformer"/' \
21
+ -e 's/^SMP_ENCODER_PROJ_DIM = .*/SMP_ENCODER_PROJ_DIM = 192/' \
22
+ -e 's/^SMP_ENCODER_DEPTH = .*/SMP_ENCODER_DEPTH = 5/' \
23
+ -e 's/^MODEL_NAME = .*/MODEL_NAME = "Segformer_B0"/' \
24
+ -e 's#"2:100": "[^"]*"#"2:100": "params/segformer_b0/best_params_strat2.json"#' \
25
+ -e 's#"3:100": "[^"]*"#"3:100": "params/segformer_b0/best_params_strat3.json"#' \
26
+ foldsrunner_simplified_after_ablation.py
27
+ python foldsrunner_simplified_after_ablation.py
28
+ ```
29
+
30
+ ## 2. U-Net + EfficientNet-B0 (CNN → U-Net params, proj 256)
31
+
32
+ ```bash
33
+ cd /workspace
34
+ sed -i -E \
35
+ -e 's/^SMP_ENCODER_NAME = .*/SMP_ENCODER_NAME = "efficientnet-b0"/' \
36
+ -e 's/^SMP_DECODER_TYPE = .*/SMP_DECODER_TYPE = "Unet"/' \
37
+ -e 's/^SMP_ENCODER_PROJ_DIM = .*/SMP_ENCODER_PROJ_DIM = 256/' \
38
+ -e 's/^SMP_ENCODER_DEPTH = .*/SMP_ENCODER_DEPTH = 5/' \
39
+ -e 's/^MODEL_NAME = .*/MODEL_NAME = "Unet_EffB0"/' \
40
+ -e 's#"2:100": "[^"]*"#"2:100": "params/unet_effb0/best_params_strat2.json"#' \
41
+ -e 's#"3:100": "[^"]*"#"3:100": "params/unet_effb0/best_params_strat3.json"#' \
42
+ foldsrunner_simplified_after_ablation.py
43
+ python foldsrunner_simplified_after_ablation.py
44
+ ```
45
+
46
+ ## 3. DeepLabV3+ + ResNet34 (CNN → U-Net params, proj 256)
47
+
48
+ ```bash
49
+ cd /workspace
50
+ sed -i -E \
51
+ -e 's/^SMP_ENCODER_NAME = .*/SMP_ENCODER_NAME = "resnet34"/' \
52
+ -e 's/^SMP_DECODER_TYPE = .*/SMP_DECODER_TYPE = "DeepLabV3Plus"/' \
53
+ -e 's/^SMP_ENCODER_PROJ_DIM = .*/SMP_ENCODER_PROJ_DIM = 256/' \
54
+ -e 's/^SMP_ENCODER_DEPTH = .*/SMP_ENCODER_DEPTH = 5/' \
55
+ -e 's/^MODEL_NAME = .*/MODEL_NAME = "DeepLabV3Plus_ResNet34"/' \
56
+ -e 's#"2:100": "[^"]*"#"2:100": "params/deeplabv3plus_r34/best_params_strat2.json"#' \
57
+ -e 's#"3:100": "[^"]*"#"3:100": "params/deeplabv3plus_r34/best_params_strat3.json"#' \
58
+ foldsrunner_simplified_after_ablation.py
59
+ python foldsrunner_simplified_after_ablation.py
60
+ ```
61
+
62
+ ## 4. LinkNet + MobileNetV3-Large (CNN → U-Net params, proj 256)
63
+
64
+ ```bash
65
+ cd /workspace
66
+ sed -i -E \
67
+ -e 's/^SMP_ENCODER_NAME = .*/SMP_ENCODER_NAME = "timm-mobilenetv3_large_100"/' \
68
+ -e 's/^SMP_DECODER_TYPE = .*/SMP_DECODER_TYPE = "Linknet"/' \
69
+ -e 's/^SMP_ENCODER_PROJ_DIM = .*/SMP_ENCODER_PROJ_DIM = 256/' \
70
+ -e 's/^SMP_ENCODER_DEPTH = .*/SMP_ENCODER_DEPTH = 5/' \
71
+ -e 's/^MODEL_NAME = .*/MODEL_NAME = "Linknet_MobileNetV3"/' \
72
+ -e 's#"2:100": "[^"]*"#"2:100": "params/linknet_mbv3/best_params_strat2.json"#' \
73
+ -e 's#"3:100": "[^"]*"#"3:100": "params/linknet_mbv3/best_params_strat3.json"#' \
74
+ foldsrunner_simplified_after_ablation.py
75
+ python foldsrunner_simplified_after_ablation.py
76
+ ```
77
+
78
+ ## 5. UPerNet + PVTv2-b1 (transformer → SegFormer params, proj 192)
79
+
80
+ ```bash
81
+ cd /workspace
82
+ sed -i -E \
83
+ -e 's/^SMP_ENCODER_NAME = .*/SMP_ENCODER_NAME = "tu-pvt_v2_b1"/' \
84
+ -e 's/^SMP_DECODER_TYPE = .*/SMP_DECODER_TYPE = "UPerNet"/' \
85
+ -e 's/^SMP_ENCODER_PROJ_DIM = .*/SMP_ENCODER_PROJ_DIM = 192/' \
86
+ -e 's/^SMP_ENCODER_DEPTH = .*/SMP_ENCODER_DEPTH = 5/' \
87
+ -e 's/^MODEL_NAME = .*/MODEL_NAME = "UPerNet_PVTv2_b1"/' \
88
+ -e 's#"2:100": "[^"]*"#"2:100": "params/upernet_pvtv2_b1/best_params_strat2.json"#' \
89
+ -e 's#"3:100": "[^"]*"#"3:100": "params/upernet_pvtv2_b1/best_params_strat3.json"#' \
90
+ foldsrunner_simplified_after_ablation.py
91
+ python foldsrunner_simplified_after_ablation.py
92
+ ```
93
+
94
+ ## 6. UPerNet + PVTv2-b2 (transformer → SegFormer params, proj 192)
95
+
96
+ ```bash
97
+ cd /workspace
98
+ sed -i -E \
99
+ -e 's/^SMP_ENCODER_NAME = .*/SMP_ENCODER_NAME = "tu-pvt_v2_b2"/' \
100
+ -e 's/^SMP_DECODER_TYPE = .*/SMP_DECODER_TYPE = "UPerNet"/' \
101
+ -e 's/^SMP_ENCODER_PROJ_DIM = .*/SMP_ENCODER_PROJ_DIM = 192/' \
102
+ -e 's/^SMP_ENCODER_DEPTH = .*/SMP_ENCODER_DEPTH = 5/' \
103
+ -e 's/^MODEL_NAME = .*/MODEL_NAME = "UPerNet_PVTv2_b2"/' \
104
+ -e 's#"2:100": "[^"]*"#"2:100": "params/upernet_pvtv2_b2/best_params_strat2.json"#' \
105
+ -e 's#"3:100": "[^"]*"#"3:100": "params/upernet_pvtv2_b2/best_params_strat3.json"#' \
106
+ foldsrunner_simplified_after_ablation.py
107
+ python foldsrunner_simplified_after_ablation.py
108
+ ```
109
+
110
+ ---
111
+
112
+ ## After the runs — plots
113
+
114
+ ```bash
115
+ cd /workspace
116
+ python plot_s2_vs_s3.py
117
+ ```
118
+
119
+ One titled figure per model → `runs/_plots/<MODEL_NAME>__s2_vs_s3.png` (6 panels: BIoU band, BIoU
120
+ contour, inference time, total training time, time per epoch, time to best checkpoint — S2 vs S3,
121
+ mean ± std across the 10 phases, Δ annotated), plus `runs/_plots/summary_s2_vs_s3.csv`.
foldsrunner_simplified_after_ablation.py ADDED
The diff for this file is too large to render. See raw diff
 
model_stats_s2_vs_s3.py ADDED
@@ -0,0 +1,392 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ """Paired S3-vs-S2 statistics for each model under runs/, at TWO levels:
2
+
3
+ * per_image (Method 1) -- pool every test image across all phases, pair
4
+ S3 vs S2 by (phase, sample_id).
5
+ * phase_level (Method 2) -- one paired value per phase = the phase-mean of
6
+ the metric; pair S3-mean vs S2-mean across phases.
7
+
8
+ Same paired machinery as ablation_stats.py: paired t-test, Wilcoxon signed-rank
9
+ (zero_method="wilcox"), sign-flip permutation, bootstrap CI for the mean delta,
10
+ Hodges-Lehmann estimate + CI, Cohen's dz, rank-biserial r, Shapiro-Wilk on the
11
+ diffs, Holm correction. HD95 is the only lower-is-better metric.
12
+
13
+ Auto-discovers every model folder directly under runs/ (each distinct MODEL_NAME).
14
+ One .xlsx per model + a combined cross-model summary.
15
+
16
+ Usage:
17
+ python model_stats_s2_vs_s3.py # scans ./runs
18
+ python model_stats_s2_vs_s3.py --runs-root X
19
+ """
20
+ from __future__ import annotations
21
+
22
+ import argparse
23
+ import json
24
+ import pathlib
25
+ import re
26
+ from collections import defaultdict
27
+
28
+ import numpy as np
29
+ import pandas as pd
30
+ from scipy import stats
31
+
32
+ # metric -> higher_is_better
33
+ METRICS = {
34
+ "biou_contour": True, # manuscript's reported "BIoU" (1-px contour)
35
+ "biou": True, # Cheng et al. CVPR 2021 d-pixel band Boundary IoU
36
+ "dice": True,
37
+ "iou": True,
38
+ "ppv": True,
39
+ "sen": True,
40
+ "hd95": False, # lower is better
41
+ }
42
+ PRIMARY = "biou_contour"
43
+ ALPHA = 0.05
44
+ N_BOOT = 20000
45
+ N_BOOT_HL = 4000
46
+ N_PERM = 20000
47
+ SEED = 20260709
48
+
49
+ # S3 is the first arm, S2 the second: Mean_delta = S3 - S2, positive favours S3
50
+ LABEL = {2: "S2 (baseline)", 3: "S3 (refinement)"}
51
+
52
+
53
+ # ---------------------------------------------------------------- stats helpers
54
+ def holm(pvals):
55
+ pvals = np.asarray(pvals, dtype=float)
56
+ order = np.argsort(pvals)
57
+ m = len(pvals)
58
+ adj = np.empty(m)
59
+ running = 0.0
60
+ for rank, idx in enumerate(order):
61
+ running = max(running, (m - rank) * pvals[idx])
62
+ adj[idx] = min(running, 1.0)
63
+ return adj
64
+
65
+
66
+ def boot_ci_mean(d, rng):
67
+ idx = rng.integers(0, len(d), size=(N_BOOT, len(d)))
68
+ return np.percentile(d[idx].mean(axis=1), [2.5, 97.5])
69
+
70
+
71
+ def hodges_lehmann(d):
72
+ i, j = np.triu_indices(len(d), k=0)
73
+ return float(np.median((d[i] + d[j]) / 2.0))
74
+
75
+
76
+ def boot_ci_hl(d, rng):
77
+ idx = rng.integers(0, len(d), size=(N_BOOT_HL, len(d)))
78
+ return np.percentile([hodges_lehmann(d[r]) for r in idx], [2.5, 97.5])
79
+
80
+
81
+ def sign_flip_perm_p(d, rng):
82
+ obs = abs(d.mean())
83
+ signs = rng.choice([-1.0, 1.0], size=(N_PERM, len(d)))
84
+ null = np.abs((signs * d).mean(axis=1))
85
+ return (np.sum(null >= obs - 1e-15) + 1) / (N_PERM + 1)
86
+
87
+
88
+ def rank_biserial(d):
89
+ nz = d[d != 0]
90
+ if len(nz) == 0:
91
+ return 0.0
92
+ r = stats.rankdata(np.abs(nz))
93
+ rp, rm = r[nz > 0].sum(), r[nz < 0].sum()
94
+ return float((rp - rm) / (rp + rm))
95
+
96
+
97
+ def analyse(x, y, metric, higher_better, level, rng):
98
+ """x = S3 vector, y = S2 vector (paired). Returns (rows, delta)."""
99
+ d = np.asarray(x, float) - np.asarray(y, float)
100
+ n = len(d)
101
+ mean_d, sd_d = float(d.mean()), float(d.std(ddof=1)) if n > 1 else float("nan")
102
+ se = sd_d / np.sqrt(n) if n > 1 else float("nan")
103
+
104
+ if n >= 2:
105
+ t_stat, p_t = stats.ttest_rel(x, y)
106
+ crit = stats.t.ppf(1 - ALPHA / 2, df=n - 1)
107
+ t_ci = (mean_d - crit * se, mean_d + crit * se)
108
+ else:
109
+ t_stat, p_t, t_ci = np.nan, 1.0, (np.nan, np.nan)
110
+
111
+ if n >= 1 and not np.allclose(d, 0):
112
+ try:
113
+ w_stat, p_w = stats.wilcoxon(x, y, zero_method="wilcox", alternative="two-sided")
114
+ except ValueError:
115
+ w_stat, p_w = np.nan, 1.0
116
+ else:
117
+ w_stat, p_w = np.nan, 1.0
118
+
119
+ p_perm = sign_flip_perm_p(d, rng) if n >= 1 else 1.0
120
+ b_lo, b_hi = boot_ci_mean(d, rng) if n >= 2 else (np.nan, np.nan)
121
+ hl = hodges_lehmann(d) if n >= 1 else np.nan
122
+ hl_lo, hl_hi = boot_ci_hl(d, rng) if n >= 2 else (np.nan, np.nan)
123
+ shapiro_p = float(stats.shapiro(d).pvalue) if (n >= 3 and not np.allclose(d, 0)) else np.nan
124
+ p_holm_c = holm([p_t, p_w, p_perm])
125
+
126
+ better = (mean_d > 0) == higher_better
127
+ winner = LABEL[3] if better else LABEL[2]
128
+
129
+ rows = []
130
+ for name, stat, p_raw, p_adj in [
131
+ ("Paired t-test", float(t_stat), float(p_t), p_holm_c[0]),
132
+ ("Wilcoxon signed-rank", float(w_stat), float(p_w), p_holm_c[1]),
133
+ ("Sign-flip permutation", mean_d, float(p_perm), p_holm_c[2]),
134
+ ]:
135
+ rows.append({
136
+ "Level": level, "Metric": metric, "Higher_is_better": higher_better,
137
+ "Contrast": "S3 - S2", "Test": name, "n_pairs": n,
138
+ "n_zero_diff": int(np.sum(d == 0)), "Statistic": stat,
139
+ "Mean_delta": mean_d, "SD_delta": sd_d, "p_raw": p_raw,
140
+ "p_Holm_within_metric_level": p_adj,
141
+ "Sig_within_metric_level": "Yes" if p_adj < ALPHA else "No",
142
+ "Better_arm": winner if p_adj < ALPHA else "n.s.",
143
+ "t_CI_low": t_ci[0], "t_CI_high": t_ci[1],
144
+ "boot_CI_low": b_lo, "boot_CI_high": b_hi,
145
+ "CI_excludes_zero": "Yes" if (b_lo > 0) or (b_hi < 0) else "No",
146
+ "HodgesLehmann_delta": hl, "HL_CI_low": hl_lo, "HL_CI_high": hl_hi,
147
+ "Cohens_dz": mean_d / sd_d if (sd_d and sd_d > 0) else np.nan,
148
+ "Rank_biserial_r": rank_biserial(d),
149
+ "Shapiro_p_on_diffs": shapiro_p,
150
+ "Diffs_normal_at_0.05": "n/a" if np.isnan(shapiro_p) else ("No" if shapiro_p < ALPHA else "Yes"),
151
+ })
152
+ return rows, d
153
+
154
+
155
+ # ---------------------------------------------------------------- discovery
156
+ def read_threshold(final_dir: pathlib.Path):
157
+ rc = final_dir / "run_config.json"
158
+ if rc.exists():
159
+ try:
160
+ return json.loads(rc.read_text()).get("threshold")
161
+ except Exception:
162
+ return None
163
+ return None
164
+
165
+
166
+ def discover(runs_root: pathlib.Path):
167
+ """model -> phase -> strategy -> {'per_sample': {sid: row}, 'threshold': float}"""
168
+ data: dict[str, dict[int, dict[int, dict]]] = defaultdict(lambda: defaultdict(dict))
169
+ for ev in runs_root.glob("*/**/strategy_*/final/evaluation.json"):
170
+ final_dir = ev.parent
171
+ ms = re.search(r"strategy_(\d+)", final_dir.parent.name)
172
+ if not ms:
173
+ continue
174
+ s = int(ms.group(1))
175
+ if s not in (2, 3):
176
+ continue
177
+ try:
178
+ model = ev.relative_to(runs_root).parts[0]
179
+ except ValueError:
180
+ continue
181
+ pm = re.search(r"phase_(\d+)", str(ev))
182
+ phase = int(pm.group(1)) if pm else 1
183
+ try:
184
+ payload = json.loads(ev.read_text())
185
+ except Exception:
186
+ continue
187
+ data[model][phase][s] = {
188
+ "per_sample": {row["sample_id"]: row for row in payload.get("per_sample", [])},
189
+ "threshold": read_threshold(final_dir),
190
+ }
191
+ return data
192
+
193
+
194
+ # ---------------------------------------------------------------- per model
195
+ def analyse_model(model, phase_map, rng):
196
+ phases = sorted(p for p in phase_map if 2 in phase_map[p] and 3 in phase_map[p])
197
+ if not phases:
198
+ return None
199
+
200
+ # per-image pooled arrays + per-phase means
201
+ img = {m: {2: [], 3: []} for m in METRICS}
202
+ phase_mean = {m: {2: [], 3: []} for m in METRICS}
203
+ phase_used, n_img_per_phase, split_warnings = [], [], []
204
+ thr = {2: None, 3: None}
205
+
206
+ for p in phases:
207
+ s2, s3 = phase_map[p][2], phase_map[p][3]
208
+ thr[2] = thr[2] or s2.get("threshold")
209
+ thr[3] = thr[3] or s3.get("threshold")
210
+ set2, set3 = set(s2["per_sample"]), set(s3["per_sample"])
211
+ if set2 != set3:
212
+ split_warnings.append(f"phase {p}: S2/S3 sample_id sets differ "
213
+ f"(|S2|={len(set2)}, |S3|={len(set3)}, common={len(set2 & set3)})")
214
+ ids = sorted(set2 & set3)
215
+ if not ids:
216
+ continue
217
+ phase_used.append(p)
218
+ n_img_per_phase.append(len(ids))
219
+ for m in METRICS:
220
+ v2 = np.array([s2["per_sample"][i][m] for i in ids], float)
221
+ v3 = np.array([s3["per_sample"][i][m] for i in ids], float)
222
+ img[m][2].append(v2)
223
+ img[m][3].append(v3)
224
+ phase_mean[m][2].append(float(v2.mean()))
225
+ phase_mean[m][3].append(float(v3.mean()))
226
+
227
+ test_rows, desc_rows = [], []
228
+ per_image = {"phase": np.concatenate([[p] * n for p, n in zip(phase_used, n_img_per_phase)]).astype(int)}
229
+ per_phase = {"phase": np.array(phase_used, int)}
230
+
231
+ for m, hib in METRICS.items():
232
+ x_img = np.concatenate(img[m][3]) if img[m][3] else np.array([])
233
+ y_img = np.concatenate(img[m][2]) if img[m][2] else np.array([])
234
+ pm2 = np.array(phase_mean[m][2], float)
235
+ pm3 = np.array(phase_mean[m][3], float)
236
+
237
+ # descriptives, both levels
238
+ for s, arr_img, arr_ph in [(2, y_img, pm2), (3, x_img, pm3)]:
239
+ desc_rows.append({
240
+ "Metric": m, "Higher_is_better": hib, "Arm": LABEL[s],
241
+ "n_images": len(arr_img), "img_Mean": arr_img.mean() if len(arr_img) else np.nan,
242
+ "img_SD": arr_img.std(ddof=1) if len(arr_img) > 1 else np.nan,
243
+ "img_Median": np.median(arr_img) if len(arr_img) else np.nan,
244
+ "n_phases": len(arr_ph), "phase_Mean": arr_ph.mean() if len(arr_ph) else np.nan,
245
+ "phase_SD": arr_ph.std(ddof=1) if len(arr_ph) > 1 else np.nan,
246
+ })
247
+
248
+ # per_image tests
249
+ rows, d_img = analyse(x_img, y_img, m, hib, "per_image", rng)
250
+ test_rows.extend(rows)
251
+ per_image[f"{m}__S2"] = y_img
252
+ per_image[f"{m}__S3"] = x_img
253
+ per_image[f"{m}__delta_S3_minus_S2"] = d_img
254
+
255
+ # phase_level tests
256
+ rows_ph, d_ph = analyse(pm3, pm2, m, hib, "phase_level", rng)
257
+ test_rows.extend(rows_ph)
258
+ per_phase[f"{m}__S2_phase_mean"] = pm2
259
+ per_phase[f"{m}__S3_phase_mean"] = pm3
260
+ per_phase[f"{m}__delta_S3_minus_S2"] = d_ph
261
+
262
+ tests_df = pd.DataFrame(test_rows)
263
+ # global Holm across this model's whole workbook (metrics x 2 levels x 3 tests)
264
+ tests_df["p_Holm_global"] = holm(tests_df["p_raw"].values)
265
+ tests_df["Sig_global"] = np.where(tests_df["p_Holm_global"] < ALPHA, "Yes", "No")
266
+
267
+ return {
268
+ "phases": phase_used,
269
+ "thr": thr,
270
+ "split_warnings": split_warnings,
271
+ "tests": tests_df,
272
+ "descriptives": pd.DataFrame(desc_rows),
273
+ "per_image": pd.DataFrame(per_image),
274
+ "per_phase": pd.DataFrame(per_phase),
275
+ }
276
+
277
+
278
+ def readme_frame(model, res):
279
+ return pd.DataFrame({"Field": [
280
+ "Model", "Contrast", "Phases used", "n phases", "S2 threshold", "S3 threshold",
281
+ "per_image level", "phase_level level", "Metrics", "PRIMARY", "hd95 direction",
282
+ "Wilcoxon zero handling", "Bootstrap", "Permutation", "Holm scope",
283
+ "Split check", "Split warnings", "Seed",
284
+ ], "Value": [
285
+ model, "S3 (refinement) - S2 (baseline); positive delta favours S3",
286
+ ", ".join(map(str, res["phases"])), len(res["phases"]),
287
+ str(res["thr"][2]), str(res["thr"][3]),
288
+ "pool all test images across phases, paired by (phase, sample_id) [manuscript Method 1]",
289
+ "one paired value per phase = phase-mean of the metric, paired across phases [manuscript Method 2]",
290
+ ", ".join(METRICS), PRIMARY, "LOWER is better; direction handled in Better_arm",
291
+ "zero_method='wilcox' (zero diffs dropped)",
292
+ f"{N_BOOT} resamples for mean-delta CI; {N_BOOT_HL} for Hodges-Lehmann",
293
+ f"{N_PERM} sign flips; p floor ~= 1/{N_PERM + 1}",
294
+ "Holm across every test in this workbook (metrics x 2 levels x 3 tests) = p_Holm_global",
295
+ "asserted S2 and S3 test sample_id sets identical within each phase",
296
+ "; ".join(res["split_warnings"]) if res["split_warnings"] else "none",
297
+ f"numpy default_rng({SEED})",
298
+ ]})
299
+
300
+
301
+ def write_workbook(model, res, out_dir):
302
+ out = out_dir / f"{model}__s2_vs_s3_stats.xlsx"
303
+ try:
304
+ with pd.ExcelWriter(out, engine="openpyxl") as xl:
305
+ readme_frame(model, res).to_excel(xl, sheet_name="README", index=False)
306
+ res["descriptives"].to_excel(xl, sheet_name="Descriptives", index=False)
307
+ res["tests"].to_excel(xl, sheet_name="Tests", index=False)
308
+ res["per_phase"].to_excel(xl, sheet_name="PerPhase", index=False)
309
+ res["per_image"].to_excel(xl, sheet_name="PerImage", index=False)
310
+ for sh in xl.book.worksheets:
311
+ for col in sh.columns:
312
+ w = max((len(str(c.value)) if c.value is not None else 0) for c in col)
313
+ sh.column_dimensions[col[0].column_letter].width = min(max(w + 2, 12), 62)
314
+ sh.freeze_panes = "A2"
315
+ return out
316
+ except Exception as exc: # openpyxl missing -> CSV fallback
317
+ print(f"[stats] xlsx failed for {model} ({exc}); writing CSVs instead")
318
+ res["tests"].to_csv(out_dir / f"{model}__tests.csv", index=False)
319
+ res["descriptives"].to_csv(out_dir / f"{model}__descriptives.csv", index=False)
320
+ res["per_phase"].to_csv(out_dir / f"{model}__per_phase.csv", index=False)
321
+ return None
322
+
323
+
324
+ def main() -> int:
325
+ ap = argparse.ArgumentParser()
326
+ ap.add_argument("--runs-root", default="runs")
327
+ args = ap.parse_args()
328
+
329
+ runs_root = pathlib.Path(args.runs_root).resolve()
330
+ if not runs_root.is_dir():
331
+ print(f"[stats] runs root not found: {runs_root}")
332
+ return 1
333
+
334
+ data = discover(runs_root)
335
+ if not data:
336
+ print(f"[stats] no evaluation.json found under {runs_root}")
337
+ return 1
338
+
339
+ out_dir = runs_root / "_stats"
340
+ out_dir.mkdir(parents=True, exist_ok=True)
341
+ rng = np.random.default_rng(SEED)
342
+
343
+ summary_rows = []
344
+ for model in sorted(data):
345
+ res = analyse_model(model, data[model], rng)
346
+ if res is None:
347
+ print(f"[stats] {model}: no phase has both S2 and S3 -- skipped")
348
+ continue
349
+ wb = write_workbook(model, res, out_dir)
350
+ print(f"[stats] {model:28s} phases={len(res['phases'])} -> {wb.name if wb else '(csv)'}"
351
+ + (" [SPLIT WARNINGS]" if res["split_warnings"] else ""))
352
+
353
+ # headline: Wilcoxon row per metric per level for the cross-model summary
354
+ t = res["tests"]
355
+ for m in METRICS:
356
+ for level in ("per_image", "phase_level"):
357
+ r = t[(t.Metric == m) & (t.Level == level) & (t.Test == "Wilcoxon signed-rank")]
358
+ if r.empty:
359
+ continue
360
+ r = r.iloc[0]
361
+ summary_rows.append({
362
+ "Model": model, "Metric": m, "Level": level, "n_pairs": int(r.n_pairs),
363
+ "S3_minus_S2": r.Mean_delta, "Wilcoxon_p_raw": r.p_raw,
364
+ "p_Holm_global": r.p_Holm_global, "Sig_global": r.Sig_global,
365
+ "Better_arm": r.Better_arm, "Cohens_dz": r.Cohens_dz,
366
+ "boot_CI_low": r.boot_CI_low, "boot_CI_high": r.boot_CI_high,
367
+ })
368
+
369
+ summary_df = pd.DataFrame(summary_rows)
370
+ summary_df.to_csv(out_dir / "ALL_MODELS_summary.csv", index=False)
371
+ try:
372
+ with pd.ExcelWriter(out_dir / "ALL_MODELS_summary.xlsx", engine="openpyxl") as xl:
373
+ summary_df.to_excel(xl, sheet_name="Summary", index=False)
374
+ for sh in xl.book.worksheets:
375
+ for col in sh.columns:
376
+ w = max((len(str(c.value)) if c.value is not None else 0) for c in col)
377
+ sh.column_dimensions[col[0].column_letter].width = min(max(w + 2, 12), 40)
378
+ sh.freeze_panes = "A2"
379
+ except Exception:
380
+ pass
381
+
382
+ print(f"\n[stats] wrote per-model workbooks + ALL_MODELS_summary to {out_dir}")
383
+ if not summary_df.empty:
384
+ pd.set_option("display.width", 240, "display.max_columns", 40)
385
+ prim = summary_df[summary_df.Metric == PRIMARY]
386
+ print(f"\n=== PRIMARY ({PRIMARY}) S3-vs-S2, both levels ===")
387
+ print(prim.to_string(index=False, float_format=lambda v: f"{v:.4g}"))
388
+ return 0
389
+
390
+
391
+ if __name__ == "__main__":
392
+ raise SystemExit(main())
params/models_manifest.json ADDED
@@ -0,0 +1,50 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ {
2
+ "segformer_b0": {
3
+ "family": "transformer",
4
+ "model_name": "Segformer_B0",
5
+ "arch": "Segformer",
6
+ "encoder": "mit_b0",
7
+ "proj_dim": 192,
8
+ "params_dir": "params/segformer_b0"
9
+ },
10
+ "unet_effb0": {
11
+ "family": "cnn",
12
+ "model_name": "Unet_EffB0",
13
+ "arch": "Unet",
14
+ "encoder": "efficientnet-b0",
15
+ "proj_dim": 256,
16
+ "params_dir": "params/unet_effb0"
17
+ },
18
+ "deeplabv3plus_r34": {
19
+ "family": "cnn",
20
+ "model_name": "DeepLabV3Plus_ResNet34",
21
+ "arch": "DeepLabV3Plus",
22
+ "encoder": "resnet34",
23
+ "proj_dim": 256,
24
+ "params_dir": "params/deeplabv3plus_r34"
25
+ },
26
+ "linknet_mbv3": {
27
+ "family": "cnn",
28
+ "model_name": "Linknet_MobileNetV3",
29
+ "arch": "Linknet",
30
+ "encoder": "timm-mobilenetv3_large_100",
31
+ "proj_dim": 256,
32
+ "params_dir": "params/linknet_mbv3"
33
+ },
34
+ "upernet_pvtv2_b1": {
35
+ "family": "transformer",
36
+ "model_name": "UPerNet_PVTv2_b1",
37
+ "arch": "UPerNet",
38
+ "encoder": "tu-pvt_v2_b1",
39
+ "proj_dim": 192,
40
+ "params_dir": "params/upernet_pvtv2_b1"
41
+ },
42
+ "upernet_pvtv2_b2": {
43
+ "family": "transformer",
44
+ "model_name": "UPerNet_PVTv2_b2",
45
+ "arch": "UPerNet",
46
+ "encoder": "tu-pvt_v2_b2",
47
+ "proj_dim": 192,
48
+ "params_dir": "params/upernet_pvtv2_b2"
49
+ }
50
+ }
plot_s2_vs_s3.py ADDED
@@ -0,0 +1,216 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ """Scan runs/ and, for every model, plot Strategy 2 (supervised baseline) vs
2
+ Strategy 3 (refinement), AVERAGED ACROSS ALL PHASES found for that model.
3
+
4
+ Six measures per model (mean across phases, error bars = std across phases):
5
+
6
+ * BIoU (band, d-pixel) evaluation.json -> metrics.biou.mean
7
+ * BIoU (contour, 1-pixel) evaluation.json -> metrics.biou_contour.mean
8
+ * Total training time (min) summary.json -> elapsed_seconds
9
+ * Inference time (ms/image) evaluation.json -> timing.mean_per_image_inference_ms
10
+ * Time per epoch (s) summary.json -> seconds_per_epoch
11
+ * Time to best ckpt (min) best.pt.meta.json -> epoch x seconds_per_epoch
12
+ (falls back to argmax of selection_metric_value in history.json)
13
+
14
+ Usage:
15
+ python plot_s2_vs_s3.py # scans ./runs
16
+ python plot_s2_vs_s3.py --runs-root X
17
+ """
18
+ from __future__ import annotations
19
+
20
+ import argparse
21
+ import json
22
+ import pathlib
23
+ import re
24
+ from collections import defaultdict
25
+
26
+ import matplotlib
27
+ matplotlib.use("Agg")
28
+ import matplotlib.pyplot as plt
29
+ import numpy as np
30
+
31
+ STRATEGY_LABEL = {2: "S2 (baseline)", 3: "S3 (refinement)"}
32
+ BAR_COLORS = {2: "#4C78A8", 3: "#F58518"}
33
+
34
+ # key, title, ylabel, higher_is_better, value format
35
+ PANELS = [
36
+ ("biou", "Boundary IoU (band)", "BIoU", True, "{:.4f}"),
37
+ ("biou_contour", "Boundary IoU (contour)", "BIoU contour", True, "{:.4f}"),
38
+ ("infer_ms", "Inference time", "ms / image", False, "{:.2f}"),
39
+ ("train_min", "Total training time", "minutes", False, "{:.1f}"),
40
+ ("epoch_sec", "Time per epoch", "seconds", False, "{:.1f}"),
41
+ ("time_to_best_min", "Time to best checkpoint", "minutes", False, "{:.1f}"),
42
+ ]
43
+
44
+
45
+ def load_json(path: pathlib.Path):
46
+ try:
47
+ return json.loads(path.read_text(encoding="utf-8"))
48
+ except Exception:
49
+ return None
50
+
51
+
52
+ def best_epoch_for(final_dir: pathlib.Path) -> int | None:
53
+ """Epoch at which the best checkpoint was saved."""
54
+ meta = load_json(final_dir / "checkpoints" / "best.pt.meta.json")
55
+ if meta and meta.get("epoch") is not None:
56
+ return int(meta["epoch"])
57
+
58
+ # fallback: argmax of the selection metric recorded in history
59
+ hist = load_json(final_dir / "history.json")
60
+ if isinstance(hist, list) and hist:
61
+ best_ep, best_val = None, None
62
+ for row in hist:
63
+ val = row.get("selection_metric_value")
64
+ if val is None:
65
+ continue
66
+ if best_val is None or float(val) > float(best_val):
67
+ best_val, best_ep = float(val), int(row.get("epoch", 0))
68
+ return best_ep
69
+ return None
70
+
71
+
72
+ def collect(runs_root: pathlib.Path) -> dict[str, dict[int, dict[str, list[float]]]]:
73
+ """model -> strategy -> metric -> [one value per phase]"""
74
+ data: dict[str, dict[int, dict[str, list[float]]]] = defaultdict(
75
+ lambda: defaultdict(lambda: defaultdict(list))
76
+ )
77
+ for eval_path in runs_root.glob("*/**/strategy_*/final/evaluation.json"):
78
+ final_dir = eval_path.parent
79
+ m = re.search(r"strategy_(\d+)", final_dir.parent.name)
80
+ if not m:
81
+ continue
82
+ strategy = int(m.group(1))
83
+ if strategy not in (2, 3):
84
+ continue
85
+ try:
86
+ model = eval_path.relative_to(runs_root).parts[0]
87
+ except ValueError:
88
+ continue
89
+
90
+ ev = load_json(eval_path)
91
+ if not ev:
92
+ continue
93
+ bucket = data[model][strategy]
94
+ metrics = ev.get("metrics", {}) or {}
95
+
96
+ for key in ("biou", "biou_contour"):
97
+ val = (metrics.get(key) or {}).get("mean")
98
+ if val is not None:
99
+ bucket[key].append(float(val))
100
+
101
+ infer = (ev.get("timing", {}) or {}).get("mean_per_image_inference_ms")
102
+ if infer is not None:
103
+ bucket["infer_ms"].append(float(infer))
104
+
105
+ summary = load_json(final_dir / "summary.json")
106
+ if summary:
107
+ if summary.get("elapsed_seconds") is not None:
108
+ bucket["train_min"].append(float(summary["elapsed_seconds"]) / 60.0)
109
+ spe = summary.get("seconds_per_epoch")
110
+ if spe is not None:
111
+ bucket["epoch_sec"].append(float(spe))
112
+ be = best_epoch_for(final_dir)
113
+ if be:
114
+ bucket["time_to_best_min"].append(be * float(spe) / 60.0)
115
+
116
+ return data
117
+
118
+
119
+ def plot_model(model: str, per_strategy: dict[int, dict[str, list[float]]],
120
+ out_dir: pathlib.Path) -> pathlib.Path | None:
121
+ strategies = [s for s in (2, 3) if per_strategy.get(s)]
122
+ if not strategies:
123
+ return None
124
+
125
+ n_phases = max((len(v.get("biou", [])) for v in per_strategy.values()), default=0)
126
+ fig, axes = plt.subplots(2, 3, figsize=(16, 8.5))
127
+ fig.suptitle(f"{model} — Strategy 2 vs Strategy 3\n"
128
+ f"mean across {n_phases} phase(s), error bars = std across phases",
129
+ fontsize=14, fontweight="bold")
130
+
131
+ for ax, (key, title, ylabel, higher_better, fmt) in zip(axes.ravel(), PANELS):
132
+ xs, means, stds, labels, colors = [], [], [], [], []
133
+ for i, s in enumerate(strategies):
134
+ vals = per_strategy[s].get(key, [])
135
+ if not vals:
136
+ continue
137
+ xs.append(i)
138
+ means.append(float(np.mean(vals)))
139
+ stds.append(float(np.std(vals)) if len(vals) > 1 else 0.0)
140
+ labels.append(STRATEGY_LABEL[s])
141
+ colors.append(BAR_COLORS[s])
142
+
143
+ if not means:
144
+ ax.set_title(f"{title} (no data)")
145
+ ax.axis("off")
146
+ continue
147
+
148
+ bars = ax.bar(xs, means, yerr=stds, capsize=5, color=colors, width=0.55)
149
+ ax.set_xticks(xs)
150
+ ax.set_xticklabels(labels, fontsize=9)
151
+ ax.set_ylabel(ylabel)
152
+ ax.set_title(f"{title} ({'higher' if higher_better else 'lower'} is better)", fontsize=11)
153
+ ax.grid(axis="y", alpha=0.3, linestyle="--")
154
+ ax.margins(y=0.18)
155
+
156
+ for b, mval in zip(bars, means):
157
+ ax.annotate(fmt.format(mval), (b.get_x() + b.get_width() / 2, b.get_height()),
158
+ textcoords="offset points", xytext=(0, 4), ha="center", fontsize=9)
159
+
160
+ if len(means) == 2:
161
+ delta = means[1] - means[0]
162
+ pct = (delta / means[0] * 100.0) if means[0] else 0.0
163
+ good = (delta > 0) if higher_better else (delta < 0)
164
+ ax.text(0.5, 0.02, f"Δ(S3−S2) = {delta:+.4g} ({pct:+.1f}%)",
165
+ transform=ax.transAxes, ha="center", fontsize=9,
166
+ color=("green" if good else "red"))
167
+
168
+ fig.tight_layout(rect=(0, 0, 1, 0.93))
169
+ out_dir.mkdir(parents=True, exist_ok=True)
170
+ out_path = out_dir / f"{model}__s2_vs_s3.png"
171
+ fig.savefig(out_path, dpi=150)
172
+ plt.close(fig)
173
+ return out_path
174
+
175
+
176
+ def main() -> int:
177
+ ap = argparse.ArgumentParser()
178
+ ap.add_argument("--runs-root", default="runs")
179
+ args = ap.parse_args()
180
+
181
+ runs_root = pathlib.Path(args.runs_root).resolve()
182
+ if not runs_root.is_dir():
183
+ print(f"[plot] runs root not found: {runs_root}")
184
+ return 1
185
+
186
+ data = collect(runs_root)
187
+ if not data:
188
+ print(f"[plot] no evaluation.json found under {runs_root}")
189
+ return 1
190
+
191
+ out_dir = runs_root / "_plots"
192
+ csv_rows = ["model,strategy,metric,mean,std,n_phases"]
193
+ made = []
194
+
195
+ for model in sorted(data):
196
+ p = plot_model(model, data[model], out_dir)
197
+ if p:
198
+ made.append(p)
199
+ n = max((len(v.get("biou", [])) for v in data[model].values()), default=0)
200
+ print(f"[plot] {model:34s} n_phases={n:<3d} -> {p.name}")
201
+ for s in sorted(data[model]):
202
+ for key, *_ in PANELS:
203
+ vals = data[model][s].get(key, [])
204
+ if vals:
205
+ csv_rows.append(
206
+ f"{model},{s},{key},{np.mean(vals):.6f},"
207
+ f"{(np.std(vals) if len(vals) > 1 else 0.0):.6f},{len(vals)}"
208
+ )
209
+
210
+ (out_dir / "summary_s2_vs_s3.csv").write_text("\n".join(csv_rows) + "\n", encoding="utf-8")
211
+ print(f"\n[plot] {len(made)} figure(s) + summary_s2_vs_s3.csv written to {out_dir}")
212
+ return 0
213
+
214
+
215
+ if __name__ == "__main__":
216
+ raise SystemExit(main())
requirements_runpod.txt ADDED
@@ -0,0 +1,13 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ # Use this with a RunPod PyTorch image that already includes torch/torchvision + CUDA.
2
+ # This avoids wasting setup time reinstalling large GPU wheels.
3
+
4
+ numpy>=1.24.0
5
+ scipy>=1.10.0
6
+ pillow>=10.0.0
7
+ tqdm>=4.66.0
8
+ matplotlib>=3.8.0
9
+ pandas>=2.2.0
10
+ openpyxl>=3.1.0
11
+ optuna>=3.6.0
12
+ segmentation-models-pytorch>=0.5.0
13
+ timm>=1.0.0
runs/UPerNet_PVTv2_b2/repeated_holdout/stratified_holdout_v1/experiment_state.sqlite3 ADDED
Binary file (90.1 kB). View file
 
runs/UPerNet_PVTv2_b2/repeated_holdout/stratified_holdout_v1/exports/aggregated_metrics_by_percent_strategy.csv ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ biou_contour_mean,biou_contour_std,biou_contour_within_run_std_mean,biou_mean,biou_std,biou_within_run_std_mean,completed_phase_count,completed_phases,dataset_percent,dice_mean,dice_std,dice_within_run_std_mean,hd95_mean,hd95_std,hd95_within_run_std_mean,iou_mean,iou_std,iou_within_run_std_mean,n_runs,ppv_mean,ppv_std,ppv_within_run_std_mean,sen_mean,sen_std,sen_within_run_std_mean,split_generation_mode,strategy
2
+ 0.10658753663301468,0.007339854717964752,0.08429641127586365,0.38765804171562196,0.018165690360599084,0.21831948757171632,5,"2,3,4,9,10",100,0.779808759689331,0.014647414633594986,0.243904447555542,12.895025062561036,1.796037401561253,21.965408325195312,0.6889553785324096,0.011983966508109928,0.25024294555187226,5,0.8218204975128174,0.009422276608595955,0.23497852087020873,0.7984434843063355,0.024920658867602998,0.25239624083042145,fixed_stratified_phases_8_1_1,2
3
+ 0.15978023707866668,0.021218451908610055,0.12744158655405044,0.45167040824890137,0.030927701615027236,0.24558151960372926,5,"2,3,4,9,10",100,0.8045141458511352,0.02037104769957007,0.2366455763578415,11.593777847290038,1.7023791352209379,18.272854232788085,0.7224233269691467,0.01810482451855519,0.2474461168050766,5,0.8372180461883545,0.008289385576892344,0.24025410711765288,0.8173958659172058,0.03127828085396388,0.23604983687400818,fixed_stratified_phases_8_1_1,3
runs/UPerNet_PVTv2_b2/repeated_holdout/stratified_holdout_v1/exports/aggregated_metrics_by_percent_strategy.json ADDED
@@ -0,0 +1,60 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ [
2
+ {
3
+ "biou_contour_mean": 0.10658753663301468,
4
+ "biou_contour_std": 0.007339854717964752,
5
+ "biou_contour_within_run_std_mean": 0.08429641127586365,
6
+ "biou_mean": 0.38765804171562196,
7
+ "biou_std": 0.018165690360599084,
8
+ "biou_within_run_std_mean": 0.21831948757171632,
9
+ "completed_phase_count": 5,
10
+ "completed_phases": "2,3,4,9,10",
11
+ "dataset_percent": 100,
12
+ "dice_mean": 0.779808759689331,
13
+ "dice_std": 0.014647414633594986,
14
+ "dice_within_run_std_mean": 0.243904447555542,
15
+ "hd95_mean": 12.895025062561036,
16
+ "hd95_std": 1.796037401561253,
17
+ "hd95_within_run_std_mean": 21.965408325195312,
18
+ "iou_mean": 0.6889553785324096,
19
+ "iou_std": 0.011983966508109928,
20
+ "iou_within_run_std_mean": 0.25024294555187226,
21
+ "n_runs": 5,
22
+ "ppv_mean": 0.8218204975128174,
23
+ "ppv_std": 0.009422276608595955,
24
+ "ppv_within_run_std_mean": 0.23497852087020873,
25
+ "sen_mean": 0.7984434843063355,
26
+ "sen_std": 0.024920658867602998,
27
+ "sen_within_run_std_mean": 0.25239624083042145,
28
+ "split_generation_mode": "fixed_stratified_phases_8_1_1",
29
+ "strategy": 2
30
+ },
31
+ {
32
+ "biou_contour_mean": 0.15978023707866668,
33
+ "biou_contour_std": 0.021218451908610055,
34
+ "biou_contour_within_run_std_mean": 0.12744158655405044,
35
+ "biou_mean": 0.45167040824890137,
36
+ "biou_std": 0.030927701615027236,
37
+ "biou_within_run_std_mean": 0.24558151960372926,
38
+ "completed_phase_count": 5,
39
+ "completed_phases": "2,3,4,9,10",
40
+ "dataset_percent": 100,
41
+ "dice_mean": 0.8045141458511352,
42
+ "dice_std": 0.02037104769957007,
43
+ "dice_within_run_std_mean": 0.2366455763578415,
44
+ "hd95_mean": 11.593777847290038,
45
+ "hd95_std": 1.7023791352209379,
46
+ "hd95_within_run_std_mean": 18.272854232788085,
47
+ "iou_mean": 0.7224233269691467,
48
+ "iou_std": 0.01810482451855519,
49
+ "iou_within_run_std_mean": 0.2474461168050766,
50
+ "n_runs": 5,
51
+ "ppv_mean": 0.8372180461883545,
52
+ "ppv_std": 0.008289385576892344,
53
+ "ppv_within_run_std_mean": 0.24025410711765288,
54
+ "sen_mean": 0.8173958659172058,
55
+ "sen_std": 0.03127828085396388,
56
+ "sen_within_run_std_mean": 0.23604983687400818,
57
+ "split_generation_mode": "fixed_stratified_phases_8_1_1",
58
+ "strategy": 3
59
+ }
60
+ ]
runs/UPerNet_PVTv2_b2/repeated_holdout/stratified_holdout_v1/exports/raw_run_metrics.csv ADDED
@@ -0,0 +1,11 @@
 
 
 
 
 
 
 
 
 
 
 
 
1
+ biou_contour_mean,biou_contour_std,biou_mean,biou_std,dataset_percent,dice_mean,dice_std,evaluation_path,hd95_mean,hd95_std,iou_mean,iou_std,phase_index,phase_test_fold_index,phase_val_fold_index,ppv_mean,ppv_std,run_dir,sen_mean,sen_std,split_generation_mode,split_manifest_path,split_repeat_index,strategy,subset_manifest_path,subset_repeat_index
2
+ 0.10553458333015442,0.07625986635684967,0.3781984746456146,0.2127406746149063,100,0.7896647453308105,0.2421818971633911,/workspace/runs/UPerNet_PVTv2_b2/repeated_holdout/stratified_holdout_v1/phase_002/pct_100/repeat_01/strategy_2/final/evaluation.json,15.18199348449707,27.79026985168457,0.7016277313232422,0.2495580017566681,2,2,3,0.824587881565094,0.23476456105709076,/workspace/runs/UPerNet_PVTv2_b2/repeated_holdout/stratified_holdout_v1/phase_002/pct_100/repeat_01/strategy_2/final,0.8144153952598572,0.24154168367385864,fixed_stratified_phases_8_1_1,/workspace/runs/UPerNet_PVTv2_b2/repeated_holdout/stratified_holdout_v1/manifests/splits/phase_002.json,2,2,/workspace/runs/UPerNet_PVTv2_b2/repeated_holdout/stratified_holdout_v1/manifests/subsets/phase_002_pct_100_repeat_01.json,1
3
+ 0.1427242010831833,0.11678919941186905,0.42219021916389465,0.24058061838150024,100,0.8018195033073425,0.24565258622169495,/workspace/runs/UPerNet_PVTv2_b2/repeated_holdout/stratified_holdout_v1/phase_002/pct_100/repeat_01/strategy_3/final/evaluation.json,12.99763011932373,19.484420776367188,0.7207279205322266,0.25497370958328247,2,2,3,0.8248835206031799,0.26045703887939453,/workspace/runs/UPerNet_PVTv2_b2/repeated_holdout/stratified_holdout_v1/phase_002/pct_100/repeat_01/strategy_3/final,0.8218875527381897,0.23904001712799072,fixed_stratified_phases_8_1_1,/workspace/runs/UPerNet_PVTv2_b2/repeated_holdout/stratified_holdout_v1/manifests/splits/phase_002.json,2,3,/workspace/runs/UPerNet_PVTv2_b2/repeated_holdout/stratified_holdout_v1/manifests/subsets/phase_002_pct_100_repeat_01.json,1
4
+ 0.10729717463254929,0.08857995271682739,0.3900618553161621,0.21769826114177704,100,0.7913828492164612,0.21163640916347504,/workspace/runs/UPerNet_PVTv2_b2/repeated_holdout/stratified_holdout_v1/phase_003/pct_100/repeat_01/strategy_2/final/evaluation.json,10.56818962097168,14.067215919494629,0.6934124827384949,0.22467739880084991,3,3,4,0.8115997314453125,0.23191630840301514,/workspace/runs/UPerNet_PVTv2_b2/repeated_holdout/stratified_holdout_v1/phase_003/pct_100/repeat_01/strategy_2/final,0.8230597376823425,0.22039473056793213,fixed_stratified_phases_8_1_1,/workspace/runs/UPerNet_PVTv2_b2/repeated_holdout/stratified_holdout_v1/manifests/splits/phase_003.json,3,2,/workspace/runs/UPerNet_PVTv2_b2/repeated_holdout/stratified_holdout_v1/manifests/subsets/phase_003_pct_100_repeat_01.json,1
5
+ 0.1609937846660614,0.13421352207660675,0.4667215049266815,0.2397007793188095,100,0.8267476558685303,0.18645723164081573,/workspace/runs/UPerNet_PVTv2_b2/repeated_holdout/stratified_holdout_v1/phase_003/pct_100/repeat_01/strategy_3/final/evaluation.json,9.511301040649414,13.27614688873291,0.737328290939331,0.20944608747959137,3,3,4,0.8473854660987854,0.21131612360477448,/workspace/runs/UPerNet_PVTv2_b2/repeated_holdout/stratified_holdout_v1/phase_003/pct_100/repeat_01/strategy_3/final,0.8498467803001404,0.1796499490737915,fixed_stratified_phases_8_1_1,/workspace/runs/UPerNet_PVTv2_b2/repeated_holdout/stratified_holdout_v1/manifests/splits/phase_003.json,3,3,/workspace/runs/UPerNet_PVTv2_b2/repeated_holdout/stratified_holdout_v1/manifests/subsets/phase_003_pct_100_repeat_01.json,1
6
+ 0.117262102663517,0.08725402504205704,0.4200691282749176,0.2263152003288269,100,0.7721100449562073,0.2689150869846344,/workspace/runs/UPerNet_PVTv2_b2/repeated_holdout/stratified_holdout_v1/phase_004/pct_100/repeat_01/strategy_2/final/evaluation.json,12.817033767700195,27.383140563964844,0.6858046054840088,0.2633354365825653,4,4,5,0.8098906874656677,0.2543603479862213,/workspace/runs/UPerNet_PVTv2_b2/repeated_holdout/stratified_holdout_v1/phase_004/pct_100/repeat_01/strategy_2/final,0.7863260507583618,0.2697471082210541,fixed_stratified_phases_8_1_1,/workspace/runs/UPerNet_PVTv2_b2/repeated_holdout/stratified_holdout_v1/manifests/splits/phase_004.json,4,2,/workspace/runs/UPerNet_PVTv2_b2/repeated_holdout/stratified_holdout_v1/manifests/subsets/phase_004_pct_100_repeat_01.json,1
7
+ 0.20023024082183838,0.14912749826908112,0.5050680637359619,0.26369938254356384,100,0.8024692535400391,0.27068495750427246,/workspace/runs/UPerNet_PVTv2_b2/repeated_holdout/stratified_holdout_v1/phase_004/pct_100/repeat_01/strategy_3/final/evaluation.json,10.490487098693848,18.224517822265625,0.7308013439178467,0.2711138427257538,4,4,5,0.8311871290206909,0.2780493199825287,/workspace/runs/UPerNet_PVTv2_b2/repeated_holdout/stratified_holdout_v1/phase_004/pct_100/repeat_01/strategy_3/final,0.8009200692176819,0.26087698340415955,fixed_stratified_phases_8_1_1,/workspace/runs/UPerNet_PVTv2_b2/repeated_holdout/stratified_holdout_v1/manifests/splits/phase_004.json,4,3,/workspace/runs/UPerNet_PVTv2_b2/repeated_holdout/stratified_holdout_v1/manifests/subsets/phase_004_pct_100_repeat_01.json,1
8
+ 0.10850856453180313,0.08922477811574936,0.38454005122184753,0.22500698268413544,100,0.7543946504592896,0.28128987550735474,/workspace/runs/UPerNet_PVTv2_b2/repeated_holdout/stratified_holdout_v1/phase_009/pct_100/repeat_01/strategy_2/final/evaluation.json,14.607939720153809,27.255828857421875,0.6673032641410828,0.2768732011318207,9,9,10,0.8306177854537964,0.2499452531337738,/workspace/runs/UPerNet_PVTv2_b2/repeated_holdout/stratified_holdout_v1/phase_009/pct_100/repeat_01/strategy_2/final,0.7551219463348389,0.29069170355796814,fixed_stratified_phases_8_1_1,/workspace/runs/UPerNet_PVTv2_b2/repeated_holdout/stratified_holdout_v1/manifests/splits/phase_009.json,9,2,/workspace/runs/UPerNet_PVTv2_b2/repeated_holdout/stratified_holdout_v1/manifests/subsets/phase_009_pct_100_repeat_01.json,1
9
+ 0.1443328559398651,0.11686944216489792,0.4260050058364868,0.24544110894203186,100,0.769157886505127,0.2825092673301697,/workspace/runs/UPerNet_PVTv2_b2/repeated_holdout/stratified_holdout_v1/phase_009/pct_100/repeat_01/strategy_3/final/evaluation.json,14.124567985534668,27.15265655517578,0.6880638003349304,0.27892905473709106,9,9,10,0.844323456287384,0.250375360250473,/workspace/runs/UPerNet_PVTv2_b2/repeated_holdout/stratified_holdout_v1/phase_009/pct_100/repeat_01/strategy_3/final,0.7663120031356812,0.2920166254043579,fixed_stratified_phases_8_1_1,/workspace/runs/UPerNet_PVTv2_b2/repeated_holdout/stratified_holdout_v1/manifests/splits/phase_009.json,9,3,/workspace/runs/UPerNet_PVTv2_b2/repeated_holdout/stratified_holdout_v1/manifests/subsets/phase_009_pct_100_repeat_01.json,1
10
+ 0.09433525800704956,0.08016343414783478,0.36542069911956787,0.20983631908893585,100,0.7914915084838867,0.21549896895885468,/workspace/runs/UPerNet_PVTv2_b2/repeated_holdout/stratified_holdout_v1/phase_010/pct_100/repeat_01/strategy_2/final/evaluation.json,11.299968719482422,13.330586433410645,0.6966288089752197,0.23677068948745728,10,10,1,0.8324064016342163,0.2039061337709427,/workspace/runs/UPerNet_PVTv2_b2/repeated_holdout/stratified_holdout_v1/phase_010/pct_100/repeat_01/strategy_2/final,0.8132942914962769,0.23960597813129425,fixed_stratified_phases_8_1_1,/workspace/runs/UPerNet_PVTv2_b2/repeated_holdout/stratified_holdout_v1/manifests/splits/phase_010.json,10,2,/workspace/runs/UPerNet_PVTv2_b2/repeated_holdout/stratified_holdout_v1/manifests/subsets/phase_010_pct_100_repeat_01.json,1
11
+ 0.15062010288238525,0.1202082708477974,0.43836724758148193,0.23848570883274078,100,0.8223764300346375,0.19792383909225464,/workspace/runs/UPerNet_PVTv2_b2/repeated_holdout/stratified_holdout_v1/phase_010/pct_100/repeat_01/strategy_3/final/evaluation.json,10.844902992248535,13.226529121398926,0.7351952791213989,0.2227678894996643,10,10,1,0.8383106589317322,0.20107269287109375,/workspace/runs/UPerNet_PVTv2_b2/repeated_holdout/stratified_holdout_v1/phase_010/pct_100/repeat_01/strategy_3/final,0.8480129241943359,0.2086656093597412,fixed_stratified_phases_8_1_1,/workspace/runs/UPerNet_PVTv2_b2/repeated_holdout/stratified_holdout_v1/manifests/splits/phase_010.json,10,3,/workspace/runs/UPerNet_PVTv2_b2/repeated_holdout/stratified_holdout_v1/manifests/subsets/phase_010_pct_100_repeat_01.json,1
runs/UPerNet_PVTv2_b2/repeated_holdout/stratified_holdout_v1/exports/raw_run_metrics.json ADDED
@@ -0,0 +1,282 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ [
2
+ {
3
+ "biou_contour_mean": 0.10553458333015442,
4
+ "biou_contour_std": 0.07625986635684967,
5
+ "biou_mean": 0.3781984746456146,
6
+ "biou_std": 0.2127406746149063,
7
+ "dataset_percent": 100,
8
+ "dice_mean": 0.7896647453308105,
9
+ "dice_std": 0.2421818971633911,
10
+ "evaluation_path": "/workspace/runs/UPerNet_PVTv2_b2/repeated_holdout/stratified_holdout_v1/phase_002/pct_100/repeat_01/strategy_2/final/evaluation.json",
11
+ "hd95_mean": 15.18199348449707,
12
+ "hd95_std": 27.79026985168457,
13
+ "iou_mean": 0.7016277313232422,
14
+ "iou_std": 0.2495580017566681,
15
+ "phase_index": 2,
16
+ "phase_test_fold_index": 2,
17
+ "phase_val_fold_index": 3,
18
+ "ppv_mean": 0.824587881565094,
19
+ "ppv_std": 0.23476456105709076,
20
+ "run_dir": "/workspace/runs/UPerNet_PVTv2_b2/repeated_holdout/stratified_holdout_v1/phase_002/pct_100/repeat_01/strategy_2/final",
21
+ "sen_mean": 0.8144153952598572,
22
+ "sen_std": 0.24154168367385864,
23
+ "split_generation_mode": "fixed_stratified_phases_8_1_1",
24
+ "split_manifest_path": "/workspace/runs/UPerNet_PVTv2_b2/repeated_holdout/stratified_holdout_v1/manifests/splits/phase_002.json",
25
+ "split_repeat_index": 2,
26
+ "strategy": 2,
27
+ "subset_manifest_path": "/workspace/runs/UPerNet_PVTv2_b2/repeated_holdout/stratified_holdout_v1/manifests/subsets/phase_002_pct_100_repeat_01.json",
28
+ "subset_repeat_index": 1
29
+ },
30
+ {
31
+ "biou_contour_mean": 0.1427242010831833,
32
+ "biou_contour_std": 0.11678919941186905,
33
+ "biou_mean": 0.42219021916389465,
34
+ "biou_std": 0.24058061838150024,
35
+ "dataset_percent": 100,
36
+ "dice_mean": 0.8018195033073425,
37
+ "dice_std": 0.24565258622169495,
38
+ "evaluation_path": "/workspace/runs/UPerNet_PVTv2_b2/repeated_holdout/stratified_holdout_v1/phase_002/pct_100/repeat_01/strategy_3/final/evaluation.json",
39
+ "hd95_mean": 12.99763011932373,
40
+ "hd95_std": 19.484420776367188,
41
+ "iou_mean": 0.7207279205322266,
42
+ "iou_std": 0.25497370958328247,
43
+ "phase_index": 2,
44
+ "phase_test_fold_index": 2,
45
+ "phase_val_fold_index": 3,
46
+ "ppv_mean": 0.8248835206031799,
47
+ "ppv_std": 0.26045703887939453,
48
+ "run_dir": "/workspace/runs/UPerNet_PVTv2_b2/repeated_holdout/stratified_holdout_v1/phase_002/pct_100/repeat_01/strategy_3/final",
49
+ "sen_mean": 0.8218875527381897,
50
+ "sen_std": 0.23904001712799072,
51
+ "split_generation_mode": "fixed_stratified_phases_8_1_1",
52
+ "split_manifest_path": "/workspace/runs/UPerNet_PVTv2_b2/repeated_holdout/stratified_holdout_v1/manifests/splits/phase_002.json",
53
+ "split_repeat_index": 2,
54
+ "strategy": 3,
55
+ "subset_manifest_path": "/workspace/runs/UPerNet_PVTv2_b2/repeated_holdout/stratified_holdout_v1/manifests/subsets/phase_002_pct_100_repeat_01.json",
56
+ "subset_repeat_index": 1
57
+ },
58
+ {
59
+ "biou_contour_mean": 0.10729717463254929,
60
+ "biou_contour_std": 0.08857995271682739,
61
+ "biou_mean": 0.3900618553161621,
62
+ "biou_std": 0.21769826114177704,
63
+ "dataset_percent": 100,
64
+ "dice_mean": 0.7913828492164612,
65
+ "dice_std": 0.21163640916347504,
66
+ "evaluation_path": "/workspace/runs/UPerNet_PVTv2_b2/repeated_holdout/stratified_holdout_v1/phase_003/pct_100/repeat_01/strategy_2/final/evaluation.json",
67
+ "hd95_mean": 10.56818962097168,
68
+ "hd95_std": 14.067215919494629,
69
+ "iou_mean": 0.6934124827384949,
70
+ "iou_std": 0.22467739880084991,
71
+ "phase_index": 3,
72
+ "phase_test_fold_index": 3,
73
+ "phase_val_fold_index": 4,
74
+ "ppv_mean": 0.8115997314453125,
75
+ "ppv_std": 0.23191630840301514,
76
+ "run_dir": "/workspace/runs/UPerNet_PVTv2_b2/repeated_holdout/stratified_holdout_v1/phase_003/pct_100/repeat_01/strategy_2/final",
77
+ "sen_mean": 0.8230597376823425,
78
+ "sen_std": 0.22039473056793213,
79
+ "split_generation_mode": "fixed_stratified_phases_8_1_1",
80
+ "split_manifest_path": "/workspace/runs/UPerNet_PVTv2_b2/repeated_holdout/stratified_holdout_v1/manifests/splits/phase_003.json",
81
+ "split_repeat_index": 3,
82
+ "strategy": 2,
83
+ "subset_manifest_path": "/workspace/runs/UPerNet_PVTv2_b2/repeated_holdout/stratified_holdout_v1/manifests/subsets/phase_003_pct_100_repeat_01.json",
84
+ "subset_repeat_index": 1
85
+ },
86
+ {
87
+ "biou_contour_mean": 0.1609937846660614,
88
+ "biou_contour_std": 0.13421352207660675,
89
+ "biou_mean": 0.4667215049266815,
90
+ "biou_std": 0.2397007793188095,
91
+ "dataset_percent": 100,
92
+ "dice_mean": 0.8267476558685303,
93
+ "dice_std": 0.18645723164081573,
94
+ "evaluation_path": "/workspace/runs/UPerNet_PVTv2_b2/repeated_holdout/stratified_holdout_v1/phase_003/pct_100/repeat_01/strategy_3/final/evaluation.json",
95
+ "hd95_mean": 9.511301040649414,
96
+ "hd95_std": 13.27614688873291,
97
+ "iou_mean": 0.737328290939331,
98
+ "iou_std": 0.20944608747959137,
99
+ "phase_index": 3,
100
+ "phase_test_fold_index": 3,
101
+ "phase_val_fold_index": 4,
102
+ "ppv_mean": 0.8473854660987854,
103
+ "ppv_std": 0.21131612360477448,
104
+ "run_dir": "/workspace/runs/UPerNet_PVTv2_b2/repeated_holdout/stratified_holdout_v1/phase_003/pct_100/repeat_01/strategy_3/final",
105
+ "sen_mean": 0.8498467803001404,
106
+ "sen_std": 0.1796499490737915,
107
+ "split_generation_mode": "fixed_stratified_phases_8_1_1",
108
+ "split_manifest_path": "/workspace/runs/UPerNet_PVTv2_b2/repeated_holdout/stratified_holdout_v1/manifests/splits/phase_003.json",
109
+ "split_repeat_index": 3,
110
+ "strategy": 3,
111
+ "subset_manifest_path": "/workspace/runs/UPerNet_PVTv2_b2/repeated_holdout/stratified_holdout_v1/manifests/subsets/phase_003_pct_100_repeat_01.json",
112
+ "subset_repeat_index": 1
113
+ },
114
+ {
115
+ "biou_contour_mean": 0.117262102663517,
116
+ "biou_contour_std": 0.08725402504205704,
117
+ "biou_mean": 0.4200691282749176,
118
+ "biou_std": 0.2263152003288269,
119
+ "dataset_percent": 100,
120
+ "dice_mean": 0.7721100449562073,
121
+ "dice_std": 0.2689150869846344,
122
+ "evaluation_path": "/workspace/runs/UPerNet_PVTv2_b2/repeated_holdout/stratified_holdout_v1/phase_004/pct_100/repeat_01/strategy_2/final/evaluation.json",
123
+ "hd95_mean": 12.817033767700195,
124
+ "hd95_std": 27.383140563964844,
125
+ "iou_mean": 0.6858046054840088,
126
+ "iou_std": 0.2633354365825653,
127
+ "phase_index": 4,
128
+ "phase_test_fold_index": 4,
129
+ "phase_val_fold_index": 5,
130
+ "ppv_mean": 0.8098906874656677,
131
+ "ppv_std": 0.2543603479862213,
132
+ "run_dir": "/workspace/runs/UPerNet_PVTv2_b2/repeated_holdout/stratified_holdout_v1/phase_004/pct_100/repeat_01/strategy_2/final",
133
+ "sen_mean": 0.7863260507583618,
134
+ "sen_std": 0.2697471082210541,
135
+ "split_generation_mode": "fixed_stratified_phases_8_1_1",
136
+ "split_manifest_path": "/workspace/runs/UPerNet_PVTv2_b2/repeated_holdout/stratified_holdout_v1/manifests/splits/phase_004.json",
137
+ "split_repeat_index": 4,
138
+ "strategy": 2,
139
+ "subset_manifest_path": "/workspace/runs/UPerNet_PVTv2_b2/repeated_holdout/stratified_holdout_v1/manifests/subsets/phase_004_pct_100_repeat_01.json",
140
+ "subset_repeat_index": 1
141
+ },
142
+ {
143
+ "biou_contour_mean": 0.20023024082183838,
144
+ "biou_contour_std": 0.14912749826908112,
145
+ "biou_mean": 0.5050680637359619,
146
+ "biou_std": 0.26369938254356384,
147
+ "dataset_percent": 100,
148
+ "dice_mean": 0.8024692535400391,
149
+ "dice_std": 0.27068495750427246,
150
+ "evaluation_path": "/workspace/runs/UPerNet_PVTv2_b2/repeated_holdout/stratified_holdout_v1/phase_004/pct_100/repeat_01/strategy_3/final/evaluation.json",
151
+ "hd95_mean": 10.490487098693848,
152
+ "hd95_std": 18.224517822265625,
153
+ "iou_mean": 0.7308013439178467,
154
+ "iou_std": 0.2711138427257538,
155
+ "phase_index": 4,
156
+ "phase_test_fold_index": 4,
157
+ "phase_val_fold_index": 5,
158
+ "ppv_mean": 0.8311871290206909,
159
+ "ppv_std": 0.2780493199825287,
160
+ "run_dir": "/workspace/runs/UPerNet_PVTv2_b2/repeated_holdout/stratified_holdout_v1/phase_004/pct_100/repeat_01/strategy_3/final",
161
+ "sen_mean": 0.8009200692176819,
162
+ "sen_std": 0.26087698340415955,
163
+ "split_generation_mode": "fixed_stratified_phases_8_1_1",
164
+ "split_manifest_path": "/workspace/runs/UPerNet_PVTv2_b2/repeated_holdout/stratified_holdout_v1/manifests/splits/phase_004.json",
165
+ "split_repeat_index": 4,
166
+ "strategy": 3,
167
+ "subset_manifest_path": "/workspace/runs/UPerNet_PVTv2_b2/repeated_holdout/stratified_holdout_v1/manifests/subsets/phase_004_pct_100_repeat_01.json",
168
+ "subset_repeat_index": 1
169
+ },
170
+ {
171
+ "biou_contour_mean": 0.10850856453180313,
172
+ "biou_contour_std": 0.08922477811574936,
173
+ "biou_mean": 0.38454005122184753,
174
+ "biou_std": 0.22500698268413544,
175
+ "dataset_percent": 100,
176
+ "dice_mean": 0.7543946504592896,
177
+ "dice_std": 0.28128987550735474,
178
+ "evaluation_path": "/workspace/runs/UPerNet_PVTv2_b2/repeated_holdout/stratified_holdout_v1/phase_009/pct_100/repeat_01/strategy_2/final/evaluation.json",
179
+ "hd95_mean": 14.607939720153809,
180
+ "hd95_std": 27.255828857421875,
181
+ "iou_mean": 0.6673032641410828,
182
+ "iou_std": 0.2768732011318207,
183
+ "phase_index": 9,
184
+ "phase_test_fold_index": 9,
185
+ "phase_val_fold_index": 10,
186
+ "ppv_mean": 0.8306177854537964,
187
+ "ppv_std": 0.2499452531337738,
188
+ "run_dir": "/workspace/runs/UPerNet_PVTv2_b2/repeated_holdout/stratified_holdout_v1/phase_009/pct_100/repeat_01/strategy_2/final",
189
+ "sen_mean": 0.7551219463348389,
190
+ "sen_std": 0.29069170355796814,
191
+ "split_generation_mode": "fixed_stratified_phases_8_1_1",
192
+ "split_manifest_path": "/workspace/runs/UPerNet_PVTv2_b2/repeated_holdout/stratified_holdout_v1/manifests/splits/phase_009.json",
193
+ "split_repeat_index": 9,
194
+ "strategy": 2,
195
+ "subset_manifest_path": "/workspace/runs/UPerNet_PVTv2_b2/repeated_holdout/stratified_holdout_v1/manifests/subsets/phase_009_pct_100_repeat_01.json",
196
+ "subset_repeat_index": 1
197
+ },
198
+ {
199
+ "biou_contour_mean": 0.1443328559398651,
200
+ "biou_contour_std": 0.11686944216489792,
201
+ "biou_mean": 0.4260050058364868,
202
+ "biou_std": 0.24544110894203186,
203
+ "dataset_percent": 100,
204
+ "dice_mean": 0.769157886505127,
205
+ "dice_std": 0.2825092673301697,
206
+ "evaluation_path": "/workspace/runs/UPerNet_PVTv2_b2/repeated_holdout/stratified_holdout_v1/phase_009/pct_100/repeat_01/strategy_3/final/evaluation.json",
207
+ "hd95_mean": 14.124567985534668,
208
+ "hd95_std": 27.15265655517578,
209
+ "iou_mean": 0.6880638003349304,
210
+ "iou_std": 0.27892905473709106,
211
+ "phase_index": 9,
212
+ "phase_test_fold_index": 9,
213
+ "phase_val_fold_index": 10,
214
+ "ppv_mean": 0.844323456287384,
215
+ "ppv_std": 0.250375360250473,
216
+ "run_dir": "/workspace/runs/UPerNet_PVTv2_b2/repeated_holdout/stratified_holdout_v1/phase_009/pct_100/repeat_01/strategy_3/final",
217
+ "sen_mean": 0.7663120031356812,
218
+ "sen_std": 0.2920166254043579,
219
+ "split_generation_mode": "fixed_stratified_phases_8_1_1",
220
+ "split_manifest_path": "/workspace/runs/UPerNet_PVTv2_b2/repeated_holdout/stratified_holdout_v1/manifests/splits/phase_009.json",
221
+ "split_repeat_index": 9,
222
+ "strategy": 3,
223
+ "subset_manifest_path": "/workspace/runs/UPerNet_PVTv2_b2/repeated_holdout/stratified_holdout_v1/manifests/subsets/phase_009_pct_100_repeat_01.json",
224
+ "subset_repeat_index": 1
225
+ },
226
+ {
227
+ "biou_contour_mean": 0.09433525800704956,
228
+ "biou_contour_std": 0.08016343414783478,
229
+ "biou_mean": 0.36542069911956787,
230
+ "biou_std": 0.20983631908893585,
231
+ "dataset_percent": 100,
232
+ "dice_mean": 0.7914915084838867,
233
+ "dice_std": 0.21549896895885468,
234
+ "evaluation_path": "/workspace/runs/UPerNet_PVTv2_b2/repeated_holdout/stratified_holdout_v1/phase_010/pct_100/repeat_01/strategy_2/final/evaluation.json",
235
+ "hd95_mean": 11.299968719482422,
236
+ "hd95_std": 13.330586433410645,
237
+ "iou_mean": 0.6966288089752197,
238
+ "iou_std": 0.23677068948745728,
239
+ "phase_index": 10,
240
+ "phase_test_fold_index": 10,
241
+ "phase_val_fold_index": 1,
242
+ "ppv_mean": 0.8324064016342163,
243
+ "ppv_std": 0.2039061337709427,
244
+ "run_dir": "/workspace/runs/UPerNet_PVTv2_b2/repeated_holdout/stratified_holdout_v1/phase_010/pct_100/repeat_01/strategy_2/final",
245
+ "sen_mean": 0.8132942914962769,
246
+ "sen_std": 0.23960597813129425,
247
+ "split_generation_mode": "fixed_stratified_phases_8_1_1",
248
+ "split_manifest_path": "/workspace/runs/UPerNet_PVTv2_b2/repeated_holdout/stratified_holdout_v1/manifests/splits/phase_010.json",
249
+ "split_repeat_index": 10,
250
+ "strategy": 2,
251
+ "subset_manifest_path": "/workspace/runs/UPerNet_PVTv2_b2/repeated_holdout/stratified_holdout_v1/manifests/subsets/phase_010_pct_100_repeat_01.json",
252
+ "subset_repeat_index": 1
253
+ },
254
+ {
255
+ "biou_contour_mean": 0.15062010288238525,
256
+ "biou_contour_std": 0.1202082708477974,
257
+ "biou_mean": 0.43836724758148193,
258
+ "biou_std": 0.23848570883274078,
259
+ "dataset_percent": 100,
260
+ "dice_mean": 0.8223764300346375,
261
+ "dice_std": 0.19792383909225464,
262
+ "evaluation_path": "/workspace/runs/UPerNet_PVTv2_b2/repeated_holdout/stratified_holdout_v1/phase_010/pct_100/repeat_01/strategy_3/final/evaluation.json",
263
+ "hd95_mean": 10.844902992248535,
264
+ "hd95_std": 13.226529121398926,
265
+ "iou_mean": 0.7351952791213989,
266
+ "iou_std": 0.2227678894996643,
267
+ "phase_index": 10,
268
+ "phase_test_fold_index": 10,
269
+ "phase_val_fold_index": 1,
270
+ "ppv_mean": 0.8383106589317322,
271
+ "ppv_std": 0.20107269287109375,
272
+ "run_dir": "/workspace/runs/UPerNet_PVTv2_b2/repeated_holdout/stratified_holdout_v1/phase_010/pct_100/repeat_01/strategy_3/final",
273
+ "sen_mean": 0.8480129241943359,
274
+ "sen_std": 0.2086656093597412,
275
+ "split_generation_mode": "fixed_stratified_phases_8_1_1",
276
+ "split_manifest_path": "/workspace/runs/UPerNet_PVTv2_b2/repeated_holdout/stratified_holdout_v1/manifests/splits/phase_010.json",
277
+ "split_repeat_index": 10,
278
+ "strategy": 3,
279
+ "subset_manifest_path": "/workspace/runs/UPerNet_PVTv2_b2/repeated_holdout/stratified_holdout_v1/manifests/subsets/phase_010_pct_100_repeat_01.json",
280
+ "subset_repeat_index": 1
281
+ }
282
+ ]
runs/UPerNet_PVTv2_b2/repeated_holdout/stratified_holdout_v1/phase_010/pct_100/repeat_01/norm_stats_BUSI_with_classes_stratified_80_10_10_100pct_phase010_repeat01.json ADDED
@@ -0,0 +1,526 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ {
2
+ "filenames": [
3
+ "BUSI_0358_B.png",
4
+ "BUSI_0140_M.png",
5
+ "BUSI_0420_B.png",
6
+ "BUSI_0101_B.png",
7
+ "BUSI_0052_B.png",
8
+ "BUSI_0068_M.png",
9
+ "BUSI_0029_B.png",
10
+ "BUSI_0024_M.png",
11
+ "BUSI_0094_B.png",
12
+ "BUSI_0011_B.png",
13
+ "BUSI_0047_M.png",
14
+ "BUSI_0153_M.png",
15
+ "BUSI_0045_M.png",
16
+ "BUSI_0090_M.png",
17
+ "BUSI_0341_B.png",
18
+ "BUSI_0437_B.png",
19
+ "BUSI_0009_B.png",
20
+ "BUSI_0320_B.png",
21
+ "BUSI_0075_M.png",
22
+ "BUSI_0099_M.png",
23
+ "BUSI_0254_B.png",
24
+ "BUSI_0310_B.png",
25
+ "BUSI_0122_M.png",
26
+ "BUSI_0032_B.png",
27
+ "BUSI_0101_M.png",
28
+ "BUSI_0148_M.png",
29
+ "BUSI_0209_M.png",
30
+ "BUSI_0145_M.png",
31
+ "BUSI_0106_M.png",
32
+ "BUSI_0187_B.png",
33
+ "BUSI_0304_B.png",
34
+ "BUSI_0055_M.png",
35
+ "BUSI_0197_M.png",
36
+ "BUSI_0109_B.png",
37
+ "BUSI_0124_M.png",
38
+ "BUSI_0183_B.png",
39
+ "BUSI_0154_B.png",
40
+ "BUSI_0139_M.png",
41
+ "BUSI_0088_B.png",
42
+ "BUSI_0030_B.png",
43
+ "BUSI_0250_B.png",
44
+ "BUSI_0061_B.png",
45
+ "BUSI_0193_B.png",
46
+ "BUSI_0036_M.png",
47
+ "BUSI_0184_B.png",
48
+ "BUSI_0155_B.png",
49
+ "BUSI_0188_M.png",
50
+ "BUSI_0005_M.png",
51
+ "BUSI_0396_B.png",
52
+ "BUSI_0010_B.png",
53
+ "BUSI_0150_B.png",
54
+ "BUSI_0300_B.png",
55
+ "BUSI_0019_M.png",
56
+ "BUSI_0086_M.png",
57
+ "BUSI_0181_M.png",
58
+ "BUSI_0138_M.png",
59
+ "BUSI_0087_M.png",
60
+ "BUSI_0180_M.png",
61
+ "BUSI_0078_M.png",
62
+ "BUSI_0113_M.png",
63
+ "BUSI_0137_M.png",
64
+ "BUSI_0428_B.png",
65
+ "BUSI_0171_B.png",
66
+ "BUSI_0169_B.png",
67
+ "BUSI_0035_M.png",
68
+ "BUSI_0201_B.png",
69
+ "BUSI_0159_M.png",
70
+ "BUSI_0104_M.png",
71
+ "BUSI_0209_B.png",
72
+ "BUSI_0274_B.png",
73
+ "BUSI_0178_B.png",
74
+ "BUSI_0340_B.png",
75
+ "BUSI_0346_B.png",
76
+ "BUSI_0008_B.png",
77
+ "BUSI_0282_B.png",
78
+ "BUSI_0352_B.png",
79
+ "BUSI_0098_B.png",
80
+ "BUSI_0280_B.png",
81
+ "BUSI_0006_M.png",
82
+ "BUSI_0323_B.png",
83
+ "BUSI_0365_B.png",
84
+ "BUSI_0205_M.png",
85
+ "BUSI_0148_B.png",
86
+ "BUSI_0066_M.png",
87
+ "BUSI_0134_M.png",
88
+ "BUSI_0144_B.png",
89
+ "BUSI_0127_M.png",
90
+ "BUSI_0240_B.png",
91
+ "BUSI_0013_B.png",
92
+ "BUSI_0226_B.png",
93
+ "BUSI_0347_B.png",
94
+ "BUSI_0175_B.png",
95
+ "BUSI_0120_B.png",
96
+ "BUSI_0028_B.png",
97
+ "BUSI_0168_M.png",
98
+ "BUSI_0237_B.png",
99
+ "BUSI_0172_B.png",
100
+ "BUSI_0362_B.png",
101
+ "BUSI_0009_M.png",
102
+ "BUSI_0285_B.png",
103
+ "BUSI_0245_B.png",
104
+ "BUSI_0387_B.png",
105
+ "BUSI_0279_B.png",
106
+ "BUSI_0039_B.png",
107
+ "BUSI_0212_B.png",
108
+ "BUSI_0092_B.png",
109
+ "BUSI_0060_M.png",
110
+ "BUSI_0271_B.png",
111
+ "BUSI_0286_B.png",
112
+ "BUSI_0404_B.png",
113
+ "BUSI_0224_B.png",
114
+ "BUSI_0063_B.png",
115
+ "BUSI_0050_M.png",
116
+ "BUSI_0264_B.png",
117
+ "BUSI_0160_B.png",
118
+ "BUSI_0125_M.png",
119
+ "BUSI_0417_B.png",
120
+ "BUSI_0384_B.png",
121
+ "BUSI_0332_B.png",
122
+ "BUSI_0291_B.png",
123
+ "BUSI_0152_B.png",
124
+ "BUSI_0027_B.png",
125
+ "BUSI_0423_B.png",
126
+ "BUSI_0144_M.png",
127
+ "BUSI_0057_B.png",
128
+ "BUSI_0126_M.png",
129
+ "BUSI_0267_B.png",
130
+ "BUSI_0121_M.png",
131
+ "BUSI_0147_M.png",
132
+ "BUSI_0383_B.png",
133
+ "BUSI_0149_M.png",
134
+ "BUSI_0201_M.png",
135
+ "BUSI_0074_B.png",
136
+ "BUSI_0074_M.png",
137
+ "BUSI_0181_B.png",
138
+ "BUSI_0166_B.png",
139
+ "BUSI_0014_M.png",
140
+ "BUSI_0082_M.png",
141
+ "BUSI_0119_B.png",
142
+ "BUSI_0073_M.png",
143
+ "BUSI_0316_B.png",
144
+ "BUSI_0424_B.png",
145
+ "BUSI_0155_M.png",
146
+ "BUSI_0016_B.png",
147
+ "BUSI_0322_B.png",
148
+ "BUSI_0145_B.png",
149
+ "BUSI_0163_B.png",
150
+ "BUSI_0017_M.png",
151
+ "BUSI_0311_B.png",
152
+ "BUSI_0162_M.png",
153
+ "BUSI_0122_B.png",
154
+ "BUSI_0167_B.png",
155
+ "BUSI_0027_M.png",
156
+ "BUSI_0041_M.png",
157
+ "BUSI_0296_B.png",
158
+ "BUSI_0431_B.png",
159
+ "BUSI_0160_M.png",
160
+ "BUSI_0326_B.png",
161
+ "BUSI_0021_B.png",
162
+ "BUSI_0060_B.png",
163
+ "BUSI_0229_B.png",
164
+ "BUSI_0023_M.png",
165
+ "BUSI_0223_B.png",
166
+ "BUSI_0044_M.png",
167
+ "BUSI_0319_B.png",
168
+ "BUSI_0004_M.png",
169
+ "BUSI_0081_M.png",
170
+ "BUSI_0051_B.png",
171
+ "BUSI_0094_M.png",
172
+ "BUSI_0190_B.png",
173
+ "BUSI_0075_B.png",
174
+ "BUSI_0116_M.png",
175
+ "BUSI_0381_B.png",
176
+ "BUSI_0102_B.png",
177
+ "BUSI_0378_B.png",
178
+ "BUSI_0412_B.png",
179
+ "BUSI_0150_M.png",
180
+ "BUSI_0401_B.png",
181
+ "BUSI_0142_B.png",
182
+ "BUSI_0114_B.png",
183
+ "BUSI_0142_M.png",
184
+ "BUSI_0368_B.png",
185
+ "BUSI_0113_B.png",
186
+ "BUSI_0161_B.png",
187
+ "BUSI_0203_B.png",
188
+ "BUSI_0154_M.png",
189
+ "BUSI_0121_B.png",
190
+ "BUSI_0111_M.png",
191
+ "BUSI_0003_M.png",
192
+ "BUSI_0199_B.png",
193
+ "BUSI_0080_B.png",
194
+ "BUSI_0072_B.png",
195
+ "BUSI_0092_M.png",
196
+ "BUSI_0262_B.png",
197
+ "BUSI_0164_B.png",
198
+ "BUSI_0344_B.png",
199
+ "BUSI_0395_B.png",
200
+ "BUSI_0100_M.png",
201
+ "BUSI_0292_B.png",
202
+ "BUSI_0244_B.png",
203
+ "BUSI_0408_B.png",
204
+ "BUSI_0219_B.png",
205
+ "BUSI_0137_B.png",
206
+ "BUSI_0186_B.png",
207
+ "BUSI_0008_M.png",
208
+ "BUSI_0299_B.png",
209
+ "BUSI_0376_B.png",
210
+ "BUSI_0343_B.png",
211
+ "BUSI_0235_B.png",
212
+ "BUSI_0139_B.png",
213
+ "BUSI_0049_B.png",
214
+ "BUSI_0239_B.png",
215
+ "BUSI_0255_B.png",
216
+ "BUSI_0164_M.png",
217
+ "BUSI_0165_M.png",
218
+ "BUSI_0309_B.png",
219
+ "BUSI_0183_M.png",
220
+ "BUSI_0349_B.png",
221
+ "BUSI_0078_B.png",
222
+ "BUSI_0025_M.png",
223
+ "BUSI_0093_M.png",
224
+ "BUSI_0277_B.png",
225
+ "BUSI_0189_B.png",
226
+ "BUSI_0138_B.png",
227
+ "BUSI_0012_B.png",
228
+ "BUSI_0202_B.png",
229
+ "BUSI_0351_B.png",
230
+ "BUSI_0372_B.png",
231
+ "BUSI_0096_M.png",
232
+ "BUSI_0103_B.png",
233
+ "BUSI_0298_B.png",
234
+ "BUSI_0411_B.png",
235
+ "BUSI_0210_M.png",
236
+ "BUSI_0169_M.png",
237
+ "BUSI_0318_B.png",
238
+ "BUSI_0073_B.png",
239
+ "BUSI_0265_B.png",
240
+ "BUSI_0400_B.png",
241
+ "BUSI_0221_B.png",
242
+ "BUSI_0103_M.png",
243
+ "BUSI_0399_B.png",
244
+ "BUSI_0281_B.png",
245
+ "BUSI_0037_M.png",
246
+ "BUSI_0126_B.png",
247
+ "BUSI_0059_B.png",
248
+ "BUSI_0161_M.png",
249
+ "BUSI_0288_B.png",
250
+ "BUSI_0179_M.png",
251
+ "BUSI_0132_M.png",
252
+ "BUSI_0422_B.png",
253
+ "BUSI_0196_B.png",
254
+ "BUSI_0131_M.png",
255
+ "BUSI_0056_M.png",
256
+ "BUSI_0129_M.png",
257
+ "BUSI_0236_B.png",
258
+ "BUSI_0045_B.png",
259
+ "BUSI_0356_B.png",
260
+ "BUSI_0065_M.png",
261
+ "BUSI_0116_B.png",
262
+ "BUSI_0110_M.png",
263
+ "BUSI_0386_B.png",
264
+ "BUSI_0228_B.png",
265
+ "BUSI_0231_B.png",
266
+ "BUSI_0055_B.png",
267
+ "BUSI_0012_M.png",
268
+ "BUSI_0118_B.png",
269
+ "BUSI_0198_M.png",
270
+ "BUSI_0194_B.png",
271
+ "BUSI_0380_B.png",
272
+ "BUSI_0361_B.png",
273
+ "BUSI_0089_M.png",
274
+ "BUSI_0104_B.png",
275
+ "BUSI_0427_B.png",
276
+ "BUSI_0135_B.png",
277
+ "BUSI_0258_B.png",
278
+ "BUSI_0188_B.png",
279
+ "BUSI_0426_B.png",
280
+ "BUSI_0243_B.png",
281
+ "BUSI_0405_B.png",
282
+ "BUSI_0173_M.png",
283
+ "BUSI_0194_M.png",
284
+ "BUSI_0159_B.png",
285
+ "BUSI_0124_B.png",
286
+ "BUSI_0022_B.png",
287
+ "BUSI_0058_B.png",
288
+ "BUSI_0335_B.png",
289
+ "BUSI_0086_B.png",
290
+ "BUSI_0266_B.png",
291
+ "BUSI_0111_B.png",
292
+ "BUSI_0042_B.png",
293
+ "BUSI_0136_M.png",
294
+ "BUSI_0353_B.png",
295
+ "BUSI_0371_B.png",
296
+ "BUSI_0202_M.png",
297
+ "BUSI_0402_B.png",
298
+ "BUSI_0204_B.png",
299
+ "BUSI_0059_M.png",
300
+ "BUSI_0084_M.png",
301
+ "BUSI_0208_M.png",
302
+ "BUSI_0397_B.png",
303
+ "BUSI_0112_B.png",
304
+ "BUSI_0026_M.png",
305
+ "BUSI_0044_B.png",
306
+ "BUSI_0222_B.png",
307
+ "BUSI_0093_B.png",
308
+ "BUSI_0225_B.png",
309
+ "BUSI_0207_M.png",
310
+ "BUSI_0035_B.png",
311
+ "BUSI_0043_M.png",
312
+ "BUSI_0275_B.png",
313
+ "BUSI_0315_B.png",
314
+ "BUSI_0095_B.png",
315
+ "BUSI_0257_B.png",
316
+ "BUSI_0430_B.png",
317
+ "BUSI_0146_B.png",
318
+ "BUSI_0290_B.png",
319
+ "BUSI_0377_B.png",
320
+ "BUSI_0418_B.png",
321
+ "BUSI_0091_M.png",
322
+ "BUSI_0118_M.png",
323
+ "BUSI_0151_M.png",
324
+ "BUSI_0293_B.png",
325
+ "BUSI_0269_B.png",
326
+ "BUSI_0071_M.png",
327
+ "BUSI_0185_M.png",
328
+ "BUSI_0076_M.png",
329
+ "BUSI_0216_B.png",
330
+ "BUSI_0355_B.png",
331
+ "BUSI_0359_B.png",
332
+ "BUSI_0007_M.png",
333
+ "BUSI_0415_B.png",
334
+ "BUSI_0063_M.png",
335
+ "BUSI_0390_B.png",
336
+ "BUSI_0394_B.png",
337
+ "BUSI_0196_M.png",
338
+ "BUSI_0350_B.png",
339
+ "BUSI_0256_B.png",
340
+ "BUSI_0133_M.png",
341
+ "BUSI_0197_B.png",
342
+ "BUSI_0214_B.png",
343
+ "BUSI_0198_B.png",
344
+ "BUSI_0170_M.png",
345
+ "BUSI_0130_M.png",
346
+ "BUSI_0036_B.png",
347
+ "BUSI_0083_B.png",
348
+ "BUSI_0206_B.png",
349
+ "BUSI_0069_B.png",
350
+ "BUSI_0208_B.png",
351
+ "BUSI_0367_B.png",
352
+ "BUSI_0128_B.png",
353
+ "BUSI_0165_B.png",
354
+ "BUSI_0096_B.png",
355
+ "BUSI_0136_B.png",
356
+ "BUSI_0069_M.png",
357
+ "BUSI_0084_B.png",
358
+ "BUSI_0131_B.png",
359
+ "BUSI_0052_M.png",
360
+ "BUSI_0048_M.png",
361
+ "BUSI_0062_B.png",
362
+ "BUSI_0253_B.png",
363
+ "BUSI_0263_B.png",
364
+ "BUSI_0295_B.png",
365
+ "BUSI_0242_B.png",
366
+ "BUSI_0308_B.png",
367
+ "BUSI_0252_B.png",
368
+ "BUSI_0414_B.png",
369
+ "BUSI_0031_B.png",
370
+ "BUSI_0043_B.png",
371
+ "BUSI_0109_M.png",
372
+ "BUSI_0099_B.png",
373
+ "BUSI_0294_B.png",
374
+ "BUSI_0028_M.png",
375
+ "BUSI_0143_M.png",
376
+ "BUSI_0374_B.png",
377
+ "BUSI_0162_B.png",
378
+ "BUSI_0057_M.png",
379
+ "BUSI_0034_B.png",
380
+ "BUSI_0098_M.png",
381
+ "BUSI_0024_B.png",
382
+ "BUSI_0001_B.png",
383
+ "BUSI_0259_B.png",
384
+ "BUSI_0127_B.png",
385
+ "BUSI_0354_B.png",
386
+ "BUSI_0153_B.png",
387
+ "BUSI_0157_B.png",
388
+ "BUSI_0364_B.png",
389
+ "BUSI_0177_M.png",
390
+ "BUSI_0413_B.png",
391
+ "BUSI_0247_B.png",
392
+ "BUSI_0174_M.png",
393
+ "BUSI_0230_B.png",
394
+ "BUSI_0115_M.png",
395
+ "BUSI_0058_M.png",
396
+ "BUSI_0046_M.png",
397
+ "BUSI_0082_B.png",
398
+ "BUSI_0076_B.png",
399
+ "BUSI_0001_M.png",
400
+ "BUSI_0284_B.png",
401
+ "BUSI_0360_B.png",
402
+ "BUSI_0031_M.png",
403
+ "BUSI_0002_B.png",
404
+ "BUSI_0020_M.png",
405
+ "BUSI_0133_B.png",
406
+ "BUSI_0097_M.png",
407
+ "BUSI_0334_B.png",
408
+ "BUSI_0053_M.png",
409
+ "BUSI_0156_B.png",
410
+ "BUSI_0010_M.png",
411
+ "BUSI_0432_B.png",
412
+ "BUSI_0040_M.png",
413
+ "BUSI_0066_B.png",
414
+ "BUSI_0081_B.png",
415
+ "BUSI_0207_B.png",
416
+ "BUSI_0218_B.png",
417
+ "BUSI_0433_B.png",
418
+ "BUSI_0170_B.png",
419
+ "BUSI_0132_B.png",
420
+ "BUSI_0085_B.png",
421
+ "BUSI_0079_B.png",
422
+ "BUSI_0192_M.png",
423
+ "BUSI_0195_M.png",
424
+ "BUSI_0248_B.png",
425
+ "BUSI_0056_B.png",
426
+ "BUSI_0206_M.png",
427
+ "BUSI_0268_B.png",
428
+ "BUSI_0014_B.png",
429
+ "BUSI_0272_B.png",
430
+ "BUSI_0305_B.png",
431
+ "BUSI_0429_B.png",
432
+ "BUSI_0330_B.png",
433
+ "BUSI_0110_B.png",
434
+ "BUSI_0143_B.png",
435
+ "BUSI_0029_M.png",
436
+ "BUSI_0382_B.png",
437
+ "BUSI_0039_M.png",
438
+ "BUSI_0038_B.png",
439
+ "BUSI_0251_B.png",
440
+ "BUSI_0050_B.png",
441
+ "BUSI_0004_B.png",
442
+ "BUSI_0425_B.png",
443
+ "BUSI_0070_B.png",
444
+ "BUSI_0033_M.png",
445
+ "BUSI_0283_B.png",
446
+ "BUSI_0260_B.png",
447
+ "BUSI_0151_B.png",
448
+ "BUSI_0342_B.png",
449
+ "BUSI_0321_B.png",
450
+ "BUSI_0200_B.png",
451
+ "BUSI_0157_M.png",
452
+ "BUSI_0297_B.png",
453
+ "BUSI_0123_M.png",
454
+ "BUSI_0016_M.png",
455
+ "BUSI_0210_B.png",
456
+ "BUSI_0022_M.png",
457
+ "BUSI_0141_M.png",
458
+ "BUSI_0166_M.png",
459
+ "BUSI_0105_M.png",
460
+ "BUSI_0363_B.png",
461
+ "BUSI_0034_M.png",
462
+ "BUSI_0061_M.png",
463
+ "BUSI_0211_B.png",
464
+ "BUSI_0067_M.png",
465
+ "BUSI_0125_B.png",
466
+ "BUSI_0193_M.png",
467
+ "BUSI_0015_B.png",
468
+ "BUSI_0107_B.png",
469
+ "BUSI_0025_B.png",
470
+ "BUSI_0108_M.png",
471
+ "BUSI_0062_M.png",
472
+ "BUSI_0140_B.png",
473
+ "BUSI_0191_B.png",
474
+ "BUSI_0175_M.png",
475
+ "BUSI_0174_B.png",
476
+ "BUSI_0389_B.png",
477
+ "BUSI_0278_B.png",
478
+ "BUSI_0213_B.png",
479
+ "BUSI_0393_B.png",
480
+ "BUSI_0033_B.png",
481
+ "BUSI_0054_M.png",
482
+ "BUSI_0080_M.png",
483
+ "BUSI_0220_B.png",
484
+ "BUSI_0019_B.png",
485
+ "BUSI_0095_M.png",
486
+ "BUSI_0195_B.png",
487
+ "BUSI_0312_B.png",
488
+ "BUSI_0168_B.png",
489
+ "BUSI_0345_B.png",
490
+ "BUSI_0329_B.png",
491
+ "BUSI_0325_B.png",
492
+ "BUSI_0077_B.png",
493
+ "BUSI_0032_M.png",
494
+ "BUSI_0234_B.png",
495
+ "BUSI_0178_M.png",
496
+ "BUSI_0156_M.png",
497
+ "BUSI_0017_B.png",
498
+ "BUSI_0180_B.png",
499
+ "BUSI_0003_B.png",
500
+ "BUSI_0007_B.png",
501
+ "BUSI_0117_M.png",
502
+ "BUSI_0369_B.png",
503
+ "BUSI_0331_B.png",
504
+ "BUSI_0375_B.png",
505
+ "BUSI_0385_B.png",
506
+ "BUSI_0324_B.png",
507
+ "BUSI_0083_M.png",
508
+ "BUSI_0040_B.png",
509
+ "BUSI_0026_B.png",
510
+ "BUSI_0190_M.png",
511
+ "BUSI_0123_B.png",
512
+ "BUSI_0203_M.png",
513
+ "BUSI_0021_M.png",
514
+ "BUSI_0416_B.png",
515
+ "BUSI_0215_B.png",
516
+ "BUSI_0246_B.png",
517
+ "BUSI_0041_B.png",
518
+ "BUSI_0105_B.png",
519
+ "BUSI_0182_B.png",
520
+ "BUSI_0129_B.png"
521
+ ],
522
+ "global_mean": 84.33389124297284,
523
+ "global_std": 56.715290540672065,
524
+ "num_images": 518,
525
+ "total_pixels": 477165084
526
+ }
runs/UPerNet_PVTv2_b2/repeated_holdout/stratified_holdout_v1/phase_010/pct_100/repeat_01/strategy_3/final/evaluation.json ADDED
@@ -0,0 +1,824 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ {
2
+ "best_metric_name": "val_refine_score",
3
+ "best_metric_value": 0.5724109242210832,
4
+ "checkpoint_mode": "best",
5
+ "checkpoint_path": "/workspace/runs/UPerNet_PVTv2_b2/repeated_holdout/stratified_holdout_v1/phase_010/pct_100/repeat_01/strategy_3/final/checkpoints/best.pt",
6
+ "metrics": {
7
+ "biou": {
8
+ "mean": 0.43836724758148193,
9
+ "std": 0.23848570883274078
10
+ },
11
+ "biou_contour": {
12
+ "mean": 0.15062010288238525,
13
+ "std": 0.1202082708477974
14
+ },
15
+ "dice": {
16
+ "mean": 0.8223764300346375,
17
+ "std": 0.19792383909225464
18
+ },
19
+ "hd95": {
20
+ "mean": 10.844902992248535,
21
+ "std": 13.226529121398926
22
+ },
23
+ "iou": {
24
+ "mean": 0.7351952791213989,
25
+ "std": 0.2227678894996643
26
+ },
27
+ "ppv": {
28
+ "mean": 0.8383106589317322,
29
+ "std": 0.20107269287109375
30
+ },
31
+ "sen": {
32
+ "mean": 0.8480129241943359,
33
+ "std": 0.2086656093597412
34
+ }
35
+ },
36
+ "per_sample": [
37
+ {
38
+ "biou": 0.7423729686871293,
39
+ "biou_contour": 0.30275293325418967,
40
+ "dice": 0.9531737821879519,
41
+ "hd95": 1.4142135381698608,
42
+ "inference_time_ms": 9.397693705977872,
43
+ "inference_time_seconds": 0.009397693705977872,
44
+ "iou": 0.9105367971099807,
45
+ "ppv": 0.9252525403530222,
46
+ "sample_id": "BUSI_0006_B",
47
+ "sen": 0.9828326217097378
48
+ },
49
+ {
50
+ "biou": 0.3491865645573761,
51
+ "biou_contour": 0.1309527258124104,
52
+ "dice": 0.9028815394108447,
53
+ "hd95": 6.324555397033691,
54
+ "inference_time_ms": 9.397693705977872,
55
+ "inference_time_seconds": 0.009397693705977872,
56
+ "iou": 0.8229572070546105,
57
+ "ppv": 0.8840125452449036,
58
+ "sample_id": "BUSI_0077_M",
59
+ "sen": 0.9225736138182327
60
+ },
61
+ {
62
+ "biou": 0.6187053102839495,
63
+ "biou_contour": 0.2000013333311111,
64
+ "dice": 0.8503937596874962,
65
+ "hd95": 2.2360680103302,
66
+ "inference_time_ms": 9.397693705977872,
67
+ "inference_time_seconds": 0.009397693705977872,
68
+ "iou": 0.7397262056669824,
69
+ "ppv": 0.9818181983470924,
70
+ "sample_id": "BUSI_0071_B",
71
+ "sen": 0.7500001736109906
72
+ },
73
+ {
74
+ "biou": 0.8209877648223673,
75
+ "biou_contour": 0.4126993449216747,
76
+ "dice": 0.942779307144603,
77
+ "hd95": 1.0,
78
+ "inference_time_ms": 9.397693705977872,
79
+ "inference_time_seconds": 0.009397693705977872,
80
+ "iou": 0.8917526331171994,
81
+ "ppv": 0.8917526331171994,
82
+ "sample_id": "BUSI_0338_B",
83
+ "sen": 1.0
84
+ },
85
+ {
86
+ "biou": 0.851063909008559,
87
+ "biou_contour": 0.47826162570778885,
88
+ "dice": 0.9639468759114087,
89
+ "hd95": 1.0,
90
+ "inference_time_ms": 9.397693705977872,
91
+ "inference_time_seconds": 0.009397693705977872,
92
+ "iou": 0.9304029558963532,
93
+ "ppv": 0.9513108796588466,
94
+ "sample_id": "BUSI_0089_B",
95
+ "sen": 0.9769230857988133
96
+ },
97
+ {
98
+ "biou": 0.4732621025050665,
99
+ "biou_contour": 0.13779561504109644,
100
+ "dice": 0.9453244776360634,
101
+ "hd95": 3.0,
102
+ "inference_time_ms": 9.397693705977872,
103
+ "inference_time_seconds": 0.009397693705977872,
104
+ "iou": 0.896317834480725,
105
+ "ppv": 0.9259259296333369,
106
+ "sample_id": "BUSI_0276_B",
107
+ "sen": 0.9655532377059897
108
+ },
109
+ {
110
+ "biou": 0.6546276174655491,
111
+ "biou_contour": 0.1939398824606773,
112
+ "dice": 0.942701231739343,
113
+ "hd95": 2.0,
114
+ "inference_time_ms": 9.397693705977872,
115
+ "inference_time_seconds": 0.009397693705977872,
116
+ "iou": 0.8916129172112365,
117
+ "ppv": 0.9531034547443511,
118
+ "sample_id": "BUSI_0241_B",
119
+ "sen": 0.9325236258402664
120
+ },
121
+ {
122
+ "biou": 0.34142125798591716,
123
+ "biou_contour": 0.06632700697601684,
124
+ "dice": 0.8681842314354562,
125
+ "hd95": 5.932379245758057,
126
+ "inference_time_ms": 9.397693705977872,
127
+ "inference_time_seconds": 0.009397693705977872,
128
+ "iou": 0.7670720517238492,
129
+ "ppv": 0.7735849270202899,
130
+ "sample_id": "BUSI_0303_B",
131
+ "sen": 0.9891435477510799
132
+ },
133
+ {
134
+ "biou": 0.21366381690128486,
135
+ "biou_contour": 0.07517105349178738,
136
+ "dice": 0.8375499355852206,
137
+ "hd95": 15.078046798706055,
138
+ "inference_time_ms": 9.397693705977872,
139
+ "inference_time_seconds": 0.009397693705977872,
140
+ "iou": 0.7205040155669183,
141
+ "ppv": 0.9794456561991387,
142
+ "sample_id": "BUSI_0015_M",
143
+ "sen": 0.7315654865883814
144
+ },
145
+ {
146
+ "biou": 0.7098215581153758,
147
+ "biou_contour": 0.23595591465627566,
148
+ "dice": 0.9290780267592151,
149
+ "hd95": 1.4142135381698608,
150
+ "inference_time_ms": 9.397693705977872,
151
+ "inference_time_seconds": 0.009397693705977872,
152
+ "iou": 0.8675497127318832,
153
+ "ppv": 0.8972603091574284,
154
+ "sample_id": "BUSI_0115_B",
155
+ "sen": 0.963235307634078
156
+ },
157
+ {
158
+ "biou": 0.0830357961575182,
159
+ "biou_contour": 0.023952388038207175,
160
+ "dice": 0.4373688090493768,
161
+ "hd95": 19.40743064880371,
162
+ "inference_time_ms": 9.397693705977872,
163
+ "inference_time_seconds": 0.009397693705977872,
164
+ "iou": 0.27989255352026177,
165
+ "ppv": 0.7284382600887809,
166
+ "sample_id": "BUSI_0187_M",
167
+ "sen": 0.3125000343749983
168
+ },
169
+ {
170
+ "biou": 0.7351779702853872,
171
+ "biou_contour": 0.33695724243777997,
172
+ "dice": 0.9445843898508325,
173
+ "hd95": 2.0,
174
+ "inference_time_ms": 9.397693705977872,
175
+ "inference_time_seconds": 0.009397693705977872,
176
+ "iou": 0.8949880918882835,
177
+ "ppv": 0.9640102920282025,
178
+ "sample_id": "BUSI_0117_B",
179
+ "sen": 0.9259259442158162
180
+ },
181
+ {
182
+ "biou": 0.5608466382986529,
183
+ "biou_contour": 0.14077711612761354,
184
+ "dice": 0.943476415491865,
185
+ "hd95": 2.0,
186
+ "inference_time_ms": 9.397693705977872,
187
+ "inference_time_seconds": 0.009397693705977872,
188
+ "iou": 0.8930008131133699,
189
+ "ppv": 0.9351305867623768,
190
+ "sample_id": "BUSI_0366_B",
191
+ "sen": 0.9519725598651321
192
+ },
193
+ {
194
+ "biou": 0.386571781630541,
195
+ "biou_contour": 0.10979254902298251,
196
+ "dice": 0.8315757809106423,
197
+ "hd95": 30.668222427368164,
198
+ "inference_time_ms": 9.397693705977872,
199
+ "inference_time_seconds": 0.009397693705977872,
200
+ "iou": 0.711707080365803,
201
+ "ppv": 0.7528641706020638,
202
+ "sample_id": "BUSI_0171_M",
203
+ "sen": 0.9286675687303116
204
+ },
205
+ {
206
+ "biou": 0.07697418201896603,
207
+ "biou_contour": 0.0364965847940183,
208
+ "dice": 0.4015067047780873,
209
+ "hd95": 49.91731262207031,
210
+ "inference_time_ms": 9.397693705977872,
211
+ "inference_time_seconds": 0.009397693705977872,
212
+ "iou": 0.25117822916428295,
213
+ "ppv": 0.2653023734273161,
214
+ "sample_id": "BUSI_0176_M",
215
+ "sen": 0.8251146889269101
216
+ },
217
+ {
218
+ "biou": 0.1461001661175689,
219
+ "biou_contour": 0.038306645502692444,
220
+ "dice": 0.7579896597534855,
221
+ "hd95": 18.812192916870117,
222
+ "inference_time_ms": 9.397693705977872,
223
+ "inference_time_seconds": 0.009397693705977872,
224
+ "iou": 0.6102925558340262,
225
+ "ppv": 0.8834621365235815,
226
+ "sample_id": "BUSI_0030_M",
227
+ "sen": 0.6637250426445648
228
+ },
229
+ {
230
+ "biou": 0.44420834811813514,
231
+ "biou_contour": 0.10802496665896093,
232
+ "dice": 0.9427007309726144,
233
+ "hd95": 4.265591621398926,
234
+ "inference_time_ms": 9.397693705977872,
235
+ "inference_time_seconds": 0.009397693705977872,
236
+ "iou": 0.8916120161680353,
237
+ "ppv": 0.9612951261148074,
238
+ "sample_id": "BUSI_0120_M",
239
+ "sen": 0.9248120327672026
240
+ },
241
+ {
242
+ "biou": 0.3795067002365559,
243
+ "biou_contour": 0.12427770974632668,
244
+ "dice": 0.8685331750294225,
245
+ "hd95": 6.227839946746826,
246
+ "inference_time_ms": 9.397693705977872,
247
+ "inference_time_seconds": 0.009397693705977872,
248
+ "iou": 0.7676170108866589,
249
+ "ppv": 0.807126707741702,
250
+ "sample_id": "BUSI_0204_M",
251
+ "sen": 0.9400527048713633
252
+ },
253
+ {
254
+ "biou": 0.5719426000206476,
255
+ "biou_contour": 0.12844116656773708,
256
+ "dice": 0.8965517396474153,
257
+ "hd95": 2.0,
258
+ "inference_time_ms": 9.397693705977872,
259
+ "inference_time_seconds": 0.009397693705977872,
260
+ "iou": 0.8125000509510731,
261
+ "ppv": 0.8147139469444286,
262
+ "sample_id": "BUSI_0388_B",
263
+ "sen": 0.9966666677777775
264
+ },
265
+ {
266
+ "biou": 0.17371942239869584,
267
+ "biou_contour": 0.03984837953541186,
268
+ "dice": 0.8872085706435451,
269
+ "hd95": 10.1461763381958,
270
+ "inference_time_ms": 9.397693705977872,
271
+ "inference_time_seconds": 0.009397693705977872,
272
+ "iou": 0.7972819964846789,
273
+ "ppv": 0.9649500692196971,
274
+ "sample_id": "BUSI_0409_B",
275
+ "sen": 0.8210596497657506
276
+ },
277
+ {
278
+ "biou": 0.19631910058086907,
279
+ "biou_contour": 0.05387237243354464,
280
+ "dice": 0.5136087251486159,
281
+ "hd95": 37.96839904785156,
282
+ "inference_time_ms": 9.397693705977872,
283
+ "inference_time_seconds": 0.009397693705977872,
284
+ "iou": 0.34554074340625834,
285
+ "ppv": 0.3923679357941323,
286
+ "sample_id": "BUSI_0172_M",
287
+ "sen": 0.7432808393622947
288
+ },
289
+ {
290
+ "biou": 0.7187502197263909,
291
+ "biou_contour": 0.34615510354787776,
292
+ "dice": 0.8906883033650593,
293
+ "hd95": 2.4556310176849365,
294
+ "inference_time_ms": 9.397693705977872,
295
+ "inference_time_seconds": 0.009397693705977872,
296
+ "iou": 0.8029198518833198,
297
+ "ppv": 0.8661418376835924,
298
+ "sample_id": "BUSI_0185_B",
299
+ "sen": 0.9166667361110532
300
+ },
301
+ {
302
+ "biou": 0.7216497714950809,
303
+ "biou_contour": 0.2391320888432851,
304
+ "dice": 0.8914286334693523,
305
+ "hd95": 1.0,
306
+ "inference_time_ms": 9.397693705977872,
307
+ "inference_time_seconds": 0.009397693705977872,
308
+ "iou": 0.8041239132743162,
309
+ "ppv": 0.876404633253221,
310
+ "sample_id": "BUSI_0301_B",
311
+ "sen": 0.9069768523524973
312
+ },
313
+ {
314
+ "biou": 0.25207992911148674,
315
+ "biou_contour": 0.034301046358562966,
316
+ "dice": 0.9223482141187281,
317
+ "hd95": 6.324555397033691,
318
+ "inference_time_ms": 9.397693705977872,
319
+ "inference_time_seconds": 0.009397693705977872,
320
+ "iou": 0.8558870576481871,
321
+ "ppv": 0.8660377394598993,
322
+ "sample_id": "BUSI_0018_B",
323
+ "sen": 0.9864906359689704
324
+ },
325
+ {
326
+ "biou": 0.032660995901921626,
327
+ "biou_contour": 0.003533921012748759,
328
+ "dice": 0.2672811258530462,
329
+ "hd95": 38.8508415222168,
330
+ "inference_time_ms": 9.397693705977872,
331
+ "inference_time_seconds": 0.009397693705977872,
332
+ "iou": 0.15425534561153484,
333
+ "ppv": 0.5005076649230797,
334
+ "sample_id": "BUSI_0233_B",
335
+ "sen": 0.1823225154466525
336
+ },
337
+ {
338
+ "biou": 0.7258065400624065,
339
+ "biou_contour": 0.26890817738808626,
340
+ "dice": 0.9356435723213401,
341
+ "hd95": 1.4142135381698608,
342
+ "inference_time_ms": 9.397693705977872,
343
+ "inference_time_seconds": 0.009397693705977872,
344
+ "iou": 0.8790697955651638,
345
+ "ppv": 0.908653868112051,
346
+ "sample_id": "BUSI_0419_B",
347
+ "sen": 0.9642857233964991
348
+ },
349
+ {
350
+ "biou": 0.29379574930734503,
351
+ "biou_contour": 0.037433669821566935,
352
+ "dice": 0.8280442931332624,
353
+ "hd95": 5.099019527435303,
354
+ "inference_time_ms": 9.397693705977872,
355
+ "inference_time_seconds": 0.009397693705977872,
356
+ "iou": 0.706549155346454,
357
+ "ppv": 0.7946175928303693,
358
+ "sample_id": "BUSI_0336_B",
359
+ "sen": 0.8644068005536517
360
+ },
361
+ {
362
+ "biou": 0.794029912229877,
363
+ "biou_contour": 0.36666719444400464,
364
+ "dice": 0.9697908621385855,
365
+ "hd95": 1.0,
366
+ "inference_time_ms": 9.397693705977872,
367
+ "inference_time_seconds": 0.009397693705977872,
368
+ "iou": 0.9413533922776853,
369
+ "ppv": 0.9952305254005523,
370
+ "sample_id": "BUSI_0373_B",
371
+ "sen": 0.9456193435620327
372
+ },
373
+ {
374
+ "biou": 0.1683850226142573,
375
+ "biou_contour": 0.056180305516682294,
376
+ "dice": 0.2592087817729344,
377
+ "hd95": 30.12056541442871,
378
+ "inference_time_ms": 9.397693705977872,
379
+ "inference_time_seconds": 0.009397693705977872,
380
+ "iou": 0.14890288801701504,
381
+ "ppv": 0.8370044770905387,
382
+ "sample_id": "BUSI_0018_M",
383
+ "sen": 0.15334954371674386
384
+ },
385
+ {
386
+ "biou": 0.2668681503657452,
387
+ "biou_contour": 0.05405433812182039,
388
+ "dice": 0.851167847605436,
389
+ "hd95": 7.713011741638184,
390
+ "inference_time_ms": 9.397693705977872,
391
+ "inference_time_seconds": 0.009397693705977872,
392
+ "iou": 0.7408983574043329,
393
+ "ppv": 0.9738968319517196,
394
+ "sample_id": "BUSI_0102_M",
395
+ "sen": 0.7559093219532406
396
+ },
397
+ {
398
+ "biou": 0.5462557064952835,
399
+ "biou_contour": 0.1428580847713354,
400
+ "dice": 0.8616071737483987,
401
+ "hd95": 2.2360680103302,
402
+ "inference_time_ms": 9.397693705977872,
403
+ "inference_time_seconds": 0.009397693705977872,
404
+ "iou": 0.7568628404459449,
405
+ "ppv": 0.9146919835583016,
406
+ "sample_id": "BUSI_0176_B",
407
+ "sen": 0.8143460698961731
408
+ },
409
+ {
410
+ "biou": 0.3086681491894134,
411
+ "biou_contour": 0.06885276431056908,
412
+ "dice": 0.9060092474060286,
413
+ "hd95": 4.8680338859558105,
414
+ "inference_time_ms": 9.397693705977872,
415
+ "inference_time_seconds": 0.009397693705977872,
416
+ "iou": 0.828169022151689,
417
+ "ppv": 0.9323467266201518,
418
+ "sample_id": "BUSI_0410_B",
419
+ "sen": 0.8811188870569987
420
+ },
421
+ {
422
+ "biou": 0.2802850926140069,
423
+ "biou_contour": 0.06716441115313156,
424
+ "dice": 0.7682753767161927,
425
+ "hd95": 21.123292922973633,
426
+ "inference_time_ms": 9.397693705977872,
427
+ "inference_time_seconds": 0.009397693705977872,
428
+ "iou": 0.6237395671639422,
429
+ "ppv": 0.6339677998838126,
430
+ "sample_id": "BUSI_0184_M",
431
+ "sen": 0.9747861335080534
432
+ },
433
+ {
434
+ "biou": 0.45420565848545247,
435
+ "biou_contour": 0.1906160731331164,
436
+ "dice": 0.9346557769157559,
437
+ "hd95": 8.485280990600586,
438
+ "inference_time_ms": 9.397693705977872,
439
+ "inference_time_seconds": 0.009397693705977872,
440
+ "iou": 0.8773274951443731,
441
+ "ppv": 0.9981308411797246,
442
+ "sample_id": "BUSI_0167_M",
443
+ "sen": 0.8787712594961257
444
+ },
445
+ {
446
+ "biou": 0.5055556929011965,
447
+ "biou_contour": 0.06206961236578457,
448
+ "dice": 0.8650065707724023,
449
+ "hd95": 2.2360680103302,
450
+ "inference_time_ms": 9.397693705977872,
451
+ "inference_time_seconds": 0.009397693705977872,
452
+ "iou": 0.7621247662529408,
453
+ "ppv": 0.7621247662529408,
454
+ "sample_id": "BUSI_0087_B",
455
+ "sen": 1.0
456
+ },
457
+ {
458
+ "biou": 0.6502347828362931,
459
+ "biou_contour": 0.22818817846034284,
460
+ "dice": 0.9763876115242623,
461
+ "hd95": 2.0,
462
+ "inference_time_ms": 9.397693705977872,
463
+ "inference_time_seconds": 0.009397693705977872,
464
+ "iou": 0.9538645909567228,
465
+ "ppv": 0.9686644366089311,
466
+ "sample_id": "BUSI_0068_B",
467
+ "sen": 0.9842349309355508
468
+ },
469
+ {
470
+ "biou": 0.38957073939547876,
471
+ "biou_contour": 0.14285790816258198,
472
+ "dice": 0.7811271584368076,
473
+ "hd95": 7.071067810058594,
474
+ "inference_time_ms": 9.397693705977872,
475
+ "inference_time_seconds": 0.009397693705977872,
476
+ "iou": 0.6408602922881091,
477
+ "ppv": 0.677272800619818,
478
+ "sample_id": "BUSI_0112_M",
479
+ "sen": 0.9226006431576956
480
+ },
481
+ {
482
+ "biou": 0.3316953864295343,
483
+ "biou_contour": 0.09487202695589055,
484
+ "dice": 0.8961695208448326,
485
+ "hd95": 7.943071365356445,
486
+ "inference_time_ms": 9.397693705977872,
487
+ "inference_time_seconds": 0.009397693705977872,
488
+ "iou": 0.8118724213859296,
489
+ "ppv": 0.8980725286483983,
490
+ "sample_id": "BUSI_0114_M",
491
+ "sen": 0.8942745642721351
492
+ },
493
+ {
494
+ "biou": 0.05033565013962667,
495
+ "biou_contour": 0.006116511890974958,
496
+ "dice": 0.5626535760855781,
497
+ "hd95": 17.481412887573242,
498
+ "inference_time_ms": 9.397693705977872,
499
+ "inference_time_seconds": 0.009397693705977872,
500
+ "iou": 0.3914530174592727,
501
+ "ppv": 0.3914530174592727,
502
+ "sample_id": "BUSI_0306_B",
503
+ "sen": 1.0
504
+ },
505
+ {
506
+ "biou": 0.3650486053350868,
507
+ "biou_contour": 0.09467482406070296,
508
+ "dice": 0.9284951987105088,
509
+ "hd95": 5.0,
510
+ "inference_time_ms": 9.397693705977872,
511
+ "inference_time_seconds": 0.009397693705977872,
512
+ "iou": 0.8665338689729791,
513
+ "ppv": 0.9371633774806687,
514
+ "sample_id": "BUSI_0097_B",
515
+ "sen": 0.9199859034196016
516
+ },
517
+ {
518
+ "biou": 0.8500000937499415,
519
+ "biou_contour": 0.466667555554074,
520
+ "dice": 0.9554455555827833,
521
+ "hd95": 1.0,
522
+ "inference_time_ms": 9.397693705977872,
523
+ "inference_time_seconds": 0.009397693705977872,
524
+ "iou": 0.9146919835583016,
525
+ "ppv": 0.9747474875012689,
526
+ "sample_id": "BUSI_0005_B",
527
+ "sen": 0.9368932345178473
528
+ },
529
+ {
530
+ "biou": 0.48387130072819307,
531
+ "biou_contour": 0.07246511236940235,
532
+ "dice": 0.7649403326930946,
533
+ "hd95": 2.888477325439453,
534
+ "inference_time_ms": 9.397693705977872,
535
+ "inference_time_seconds": 0.009397693705977872,
536
+ "iou": 0.6193550842870424,
537
+ "ppv": 0.6193550842870424,
538
+ "sample_id": "BUSI_0091_B",
539
+ "sen": 1.0
540
+ },
541
+ {
542
+ "biou": 0.1424017458872611,
543
+ "biou_contour": 0.040892371581343574,
544
+ "dice": 0.7673977816824823,
545
+ "hd95": 28.28603744506836,
546
+ "inference_time_ms": 9.397693705977872,
547
+ "inference_time_seconds": 0.009397693705977872,
548
+ "iou": 0.6225834853165864,
549
+ "ppv": 0.8966462793367164,
550
+ "sample_id": "BUSI_0072_M",
551
+ "sen": 0.670716319490118
552
+ },
553
+ {
554
+ "biou": 0.5909094628095792,
555
+ "biou_contour": 0.14492877546554278,
556
+ "dice": 0.7428572897958344,
557
+ "hd95": 28.0585994720459,
558
+ "inference_time_ms": 9.397693705977872,
559
+ "inference_time_seconds": 0.009397693705977872,
560
+ "iou": 0.5909094628095792,
561
+ "ppv": 0.6914896899045853,
562
+ "sample_id": "BUSI_0179_B",
563
+ "sen": 0.8024693796674325
564
+ },
565
+ {
566
+ "biou": 0.28957063931648597,
567
+ "biou_contour": 0.06666701234555099,
568
+ "dice": 0.7122785759145647,
569
+ "hd95": 26.309659957885742,
570
+ "inference_time_ms": 9.397693705977872,
571
+ "inference_time_seconds": 0.009397693705977872,
572
+ "iou": 0.5531309721887123,
573
+ "ppv": 0.9526143868277146,
574
+ "sample_id": "BUSI_0200_M",
575
+ "sen": 0.5687805298750702
576
+ },
577
+ {
578
+ "biou": 0.3143382983144946,
579
+ "biou_contour": 0.09117673788919474,
580
+ "dice": 0.891268834792724,
581
+ "hd95": 10.0,
582
+ "inference_time_ms": 9.397693705977872,
583
+ "inference_time_seconds": 0.009397693705977872,
584
+ "iou": 0.8038637916220107,
585
+ "ppv": 0.9835737186068222,
586
+ "sample_id": "BUSI_0067_B",
587
+ "sen": 0.8148025285495344
588
+ },
589
+ {
590
+ "biou": 0.34362947034180114,
591
+ "biou_contour": 0.13772506723049865,
592
+ "dice": 0.7608163460558085,
593
+ "hd95": 10.131365776062012,
594
+ "inference_time_ms": 9.397693705977872,
595
+ "inference_time_seconds": 0.009397693705977872,
596
+ "iou": 0.6139657952614236,
597
+ "ppv": 0.6436464580598815,
598
+ "sample_id": "BUSI_0379_B",
599
+ "sen": 0.930139734503047
600
+ },
601
+ {
602
+ "biou": 0.5395189530906125,
603
+ "biou_contour": 0.23674938630763737,
604
+ "dice": 0.9532275142174071,
605
+ "hd95": 3.822493314743042,
606
+ "inference_time_ms": 9.397693705977872,
607
+ "inference_time_seconds": 0.009397693705977872,
608
+ "iou": 0.9106348600632891,
609
+ "ppv": 0.9352159495342214,
610
+ "sample_id": "BUSI_0158_B",
611
+ "sen": 0.9719464837312696
612
+ },
613
+ {
614
+ "biou": 0.3329533257749913,
615
+ "biou_contour": 0.08965548632569438,
616
+ "dice": 0.888097663069744,
617
+ "hd95": 9.054885864257812,
618
+ "inference_time_ms": 10.765331448055804,
619
+ "inference_time_seconds": 0.010765331448055804,
620
+ "iou": 0.798719130891165,
621
+ "ppv": 0.8151260590510709,
622
+ "sample_id": "BUSI_0119_M",
623
+ "sen": 0.9754189957866483
624
+ },
625
+ {
626
+ "biou": 0.0617783451629131,
627
+ "biou_contour": 0.010593429959019077,
628
+ "dice": 0.6281086056569861,
629
+ "hd95": 32.0,
630
+ "inference_time_ms": 10.765331448055804,
631
+ "inference_time_seconds": 0.010765331448055804,
632
+ "iou": 0.4578413527716389,
633
+ "ppv": 0.9542461021058544,
634
+ "sample_id": "BUSI_0407_B",
635
+ "sen": 0.46811767610750427
636
+ },
637
+ {
638
+ "biou": 0.7490842950395064,
639
+ "biou_contour": 0.28934046226372473,
640
+ "dice": 0.9722116493257842,
641
+ "hd95": 1.0,
642
+ "inference_time_ms": 10.765331448055804,
643
+ "inference_time_seconds": 0.010765331448055804,
644
+ "iou": 0.9459259299314126,
645
+ "ppv": 0.9845798007263068,
646
+ "sample_id": "BUSI_0173_B",
647
+ "sen": 0.9601503789360617
648
+ },
649
+ {
650
+ "biou": 0.463959445283305,
651
+ "biou_contour": 0.14024416455970595,
652
+ "dice": 0.9335612062900832,
653
+ "hd95": 4.4721360206604,
654
+ "inference_time_ms": 10.765331448055804,
655
+ "inference_time_seconds": 0.010765331448055804,
656
+ "iou": 0.8754006460176024,
657
+ "ppv": 0.9771914142579868,
658
+ "sample_id": "BUSI_0421_B",
659
+ "sen": 0.8936605360466039
660
+ },
661
+ {
662
+ "biou": 0.7783784981737848,
663
+ "biou_contour": 0.31506943141173777,
664
+ "dice": 0.9333333481481448,
665
+ "hd95": 1.4142135381698608,
666
+ "inference_time_ms": 10.765331448055804,
667
+ "inference_time_seconds": 0.010765331448055804,
668
+ "iou": 0.8750000520833117,
669
+ "ppv": 0.9502262668659426,
670
+ "sample_id": "BUSI_0348_B",
671
+ "sen": 0.9170306039167668
672
+ },
673
+ {
674
+ "biou": 0.7138729150656316,
675
+ "biou_contour": 0.4051729265750633,
676
+ "dice": 0.9563909807224826,
677
+ "hd95": 2.2124598026275635,
678
+ "inference_time_ms": 10.765331448055804,
679
+ "inference_time_seconds": 0.010765331448055804,
680
+ "iou": 0.9164265250105872,
681
+ "ppv": 0.9891135320196685,
682
+ "sample_id": "BUSI_0023_B",
683
+ "sen": 0.9257642029455309
684
+ },
685
+ {
686
+ "biou": 0.525266020576327,
687
+ "biou_contour": 0.16731549909902763,
688
+ "dice": 0.9496611822444051,
689
+ "hd95": 4.123105525970459,
690
+ "inference_time_ms": 10.765331448055804,
691
+ "inference_time_seconds": 0.010765331448055804,
692
+ "iou": 0.9041474698549552,
693
+ "ppv": 0.9129827867388186,
694
+ "sample_id": "BUSI_0261_B",
695
+ "sen": 0.989409985405447
696
+ },
697
+ {
698
+ "biou": 1.5772868174626472e-07,
699
+ "biou_contour": 5.208330620661135e-07,
700
+ "dice": 1.1587484172945056e-07,
701
+ "hd95": 58.1602668762207,
702
+ "inference_time_ms": 10.765331448055804,
703
+ "inference_time_seconds": 0.010765331448055804,
704
+ "iou": 1.1587484172945056e-07,
705
+ "ppv": 1.626015995769757e-07,
706
+ "sample_id": "BUSI_0302_B",
707
+ "sen": 4.0322564386062747e-07
708
+ },
709
+ {
710
+ "biou": 0.1505263604986126,
711
+ "biou_contour": 0.03963981267751123,
712
+ "dice": 0.8559771536518038,
713
+ "hd95": 12.008319854736328,
714
+ "inference_time_ms": 10.765331448055804,
715
+ "inference_time_seconds": 0.010765331448055804,
716
+ "iou": 0.7482168375852918,
717
+ "ppv": 0.9945484713309203,
718
+ "sample_id": "BUSI_0002_M",
719
+ "sen": 0.7512981244172224
720
+ },
721
+ {
722
+ "biou": 0.7492113960234391,
723
+ "biou_contour": 0.32876742978656176,
724
+ "dice": 0.973445987524261,
725
+ "hd95": 1.4142135381698608,
726
+ "inference_time_ms": 10.765331448055804,
727
+ "inference_time_seconds": 0.010765331448055804,
728
+ "iou": 0.9482657290849071,
729
+ "ppv": 0.9877526033219471,
730
+ "sample_id": "BUSI_0289_B",
731
+ "sen": 0.9595478905682397
732
+ },
733
+ {
734
+ "biou": 0.6188437647015493,
735
+ "biou_contour": 0.190751912860166,
736
+ "dice": 0.9331568541921341,
737
+ "hd95": 2.177051067352295,
738
+ "inference_time_ms": 10.765331448055804,
739
+ "inference_time_seconds": 0.010765331448055804,
740
+ "iou": 0.8746898418498955,
741
+ "ppv": 0.8801498276966507,
742
+ "sample_id": "BUSI_0020_B",
743
+ "sen": 0.9929577474707398
744
+ },
745
+ {
746
+ "biou": 0.22093029295114006,
747
+ "biou_contour": 0.07329867191134244,
748
+ "dice": 0.9058869611553718,
749
+ "hd95": 8.377696990966797,
750
+ "inference_time_ms": 10.765331448055804,
751
+ "inference_time_seconds": 0.010765331448055804,
752
+ "iou": 0.8279646903372777,
753
+ "ppv": 0.9954102124093456,
754
+ "sample_id": "BUSI_0392_B",
755
+ "sen": 0.8311377285955035
756
+ },
757
+ {
758
+ "biou": 0.44683264176101334,
759
+ "biou_contour": 0.10963484729739295,
760
+ "dice": 0.9374375387280124,
761
+ "hd95": 5.656854152679443,
762
+ "inference_time_ms": 10.765331448055804,
763
+ "inference_time_seconds": 0.010765331448055804,
764
+ "iou": 0.8822422918644736,
765
+ "ppv": 0.9606718574079534,
766
+ "sample_id": "BUSI_0370_B",
767
+ "sen": 0.9153005497540769
768
+ },
769
+ {
770
+ "biou": 0.6372203018586217,
771
+ "biou_contour": 0.16774220395412778,
772
+ "dice": 0.9702609018379693,
773
+ "hd95": 2.0,
774
+ "inference_time_ms": 10.765331448055804,
775
+ "inference_time_seconds": 0.010765331448055804,
776
+ "iou": 0.9422395484677694,
777
+ "ppv": 0.9479500909821714,
778
+ "sample_id": "BUSI_0434_B",
779
+ "sen": 0.9936472349160226
780
+ },
781
+ {
782
+ "biou": 0.06320354431138145,
783
+ "biou_contour": 0.006135274191633685,
784
+ "dice": 0.43993392872471254,
785
+ "hd95": 42.035099029541016,
786
+ "inference_time_ms": 10.765331448055804,
787
+ "inference_time_seconds": 0.010765331448055804,
788
+ "iou": 0.2819969960061423,
789
+ "ppv": 0.29634342459957314,
790
+ "sample_id": "BUSI_0199_M",
791
+ "sen": 0.853479866897448
792
+ },
793
+ {
794
+ "biou": 0.6038062969193257,
795
+ "biou_contour": 0.16981171235296588,
796
+ "dice": 0.9492900629091252,
797
+ "hd95": 2.2360680103302,
798
+ "inference_time_ms": 10.765331448055804,
799
+ "inference_time_seconds": 0.010765331448055804,
800
+ "iou": 0.9034749109285783,
801
+ "ppv": 0.9427880787439098,
802
+ "sample_id": "BUSI_0088_M",
803
+ "sen": 0.9558823565455591
804
+ }
805
+ ],
806
+ "strategy": 3,
807
+ "timing": {
808
+ "avg_batch_inference_ms": 311.66730052791536,
809
+ "avg_sample_inference_ms": 9.739603141497355,
810
+ "device": "cuda",
811
+ "mean_per_image_inference_ms": 9.739603141497355,
812
+ "mean_per_image_inference_seconds": 0.009739603141497355,
813
+ "num_batches": 2,
814
+ "num_samples": 64,
815
+ "scope": "test_set_evaluation",
816
+ "std_batch_inference_ms": 139.4219973590225,
817
+ "std_per_image_inference_ms": 0.5922045139069394,
818
+ "std_per_image_inference_seconds": 0.0005922045139069394,
819
+ "std_sample_inference_ms": 0.5922045139069394,
820
+ "strategy": 3,
821
+ "tmax": 8,
822
+ "total_inference_ms": 623.3346010558307
823
+ }
824
+ }
runs/UPerNet_PVTv2_b2/repeated_holdout/stratified_holdout_v1/phase_010/pct_100/repeat_01/strategy_3/final/evaluation_results.xlsx ADDED
Binary file (69.9 kB). View file
 
runs/UPerNet_PVTv2_b2/repeated_holdout/stratified_holdout_v1/phase_010/pct_100/repeat_01/strategy_3/final/evaluation_summary.json ADDED
@@ -0,0 +1,4 @@
 
 
 
 
 
1
+ {
2
+ "mean_dice": 0.8223764300346375,
3
+ "mean_iou": 0.7351952791213989
4
+ }
runs/UPerNet_PVTv2_b2/repeated_holdout/stratified_holdout_v1/phase_010/pct_100/repeat_01/strategy_3/final/history.json ADDED
The diff for this file is too large to render. See raw diff
 
runs/UPerNet_PVTv2_b2/repeated_holdout/stratified_holdout_v1/phase_010/pct_100/repeat_01/strategy_3/final/low_iou_samples.csv ADDED
@@ -0,0 +1,2 @@
 
 
 
1
+ sample_id
2
+ BUSI_0302_B
runs/UPerNet_PVTv2_b2/repeated_holdout/stratified_holdout_v1/phase_010/pct_100/repeat_01/strategy_3/final/run_config.json ADDED
@@ -0,0 +1,112 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ {
2
+ "a3c_entropy_coeff": 0.0,
3
+ "aux_action_ce_mix": 0.8726103361457451,
4
+ "backbone_family": "smp",
5
+ "base_split_manifest_path": "/workspace/runs/UPerNet_PVTv2_b2/repeated_holdout/stratified_holdout_v1/manifests/splits/phase_010.json",
6
+ "best_checkpoint_metric_name": "val_refine_score",
7
+ "best_checkpoint_metrics": {
8
+ "2": "val_iou",
9
+ "3": "val_refine_score"
10
+ },
11
+ "biou_reward_weight": 1.0,
12
+ "boundary_reward_weight": 0.5,
13
+ "critic_loss_weight": 1.4015767132796022,
14
+ "data_root": "/workspace/BUSI_with_classes",
15
+ "dataset_name": "BUSI_with_classes",
16
+ "dataset_percent": 1.0,
17
+ "dataset_split_policy": "stratified",
18
+ "dataset_splits_path": "/workspace/runs/UPerNet_PVTv2_b2/repeated_holdout/stratified_holdout_v1/manifests/splits/phase_010.json",
19
+ "decoder_lr": 0.0,
20
+ "dropout_p": 0.015714592843367126,
21
+ "early_stopping_min_delta": 0.0,
22
+ "early_stopping_mode": "auto",
23
+ "early_stopping_monitor": "val_refine_score",
24
+ "early_stopping_patience": 30,
25
+ "early_stopping_start_epoch": 30,
26
+ "elastic_aug_prob": 0.4303652916281717,
27
+ "encoder_lr": 0.0,
28
+ "entropy_alpha_init": 0.005,
29
+ "entropy_lr": 6.618595597183474e-05,
30
+ "entropy_target_ratio": 0.2,
31
+ "epoch_probe_mode": "rolling_random",
32
+ "evaluation_checkpoint_mode": "best",
33
+ "execution_mode": "train_eval",
34
+ "folds_experiment_name": "stratified_holdout_v1",
35
+ "gae_lambda": 0.8306320445782609,
36
+ "gamma": 0.95,
37
+ "grad_clip_norm": 6.0,
38
+ "head_lr": 0.0001971844222061614,
39
+ "iou_reward_weight": 1.0,
40
+ "keep_correct_reward_weight": 0.05,
41
+ "max_epochs": 120,
42
+ "min_alpha": 0.00017019223026554014,
43
+ "normalization_cache_path": "/workspace/runs/UPerNet_PVTv2_b2/repeated_holdout/stratified_holdout_v1/phase_010/pct_100/repeat_01/norm_stats_BUSI_with_classes_stratified_80_10_10_100pct_phase010_repeat01.json",
44
+ "num_actions": 3,
45
+ "percent_sampling_mode": "incremental",
46
+ "phase_count": 10,
47
+ "phase_index": 10,
48
+ "phase_test_fold_index": 10,
49
+ "phase_val_fold_index": 1,
50
+ "project_dir": "/workspace",
51
+ "refine_delta_large": 0.08,
52
+ "refine_delta_small": 0.03,
53
+ "rl_lr": 0.0001971844222061614,
54
+ "run_name": "phase=010 | repeat=01 | strategy=3 | pct=100%",
55
+ "run_type": "final",
56
+ "save_history_incrementally": false,
57
+ "scheduler_factor": 0.5,
58
+ "scheduler_min_lr": 1e-05,
59
+ "scheduler_patience": 5,
60
+ "scheduler_threshold": 0.001,
61
+ "selected_split_manifest_path": "/workspace/runs/UPerNet_PVTv2_b2/repeated_holdout/stratified_holdout_v1/manifests/subsets/phase_010_pct_100_repeat_01.json",
62
+ "smp_decoder_type": "UPerNet",
63
+ "smp_encoder_depth": 5,
64
+ "smp_encoder_name": "tu-pvt_v2_b2",
65
+ "smp_encoder_proj_dim": 192,
66
+ "smp_encoder_weights": "imagenet",
67
+ "split_generation_mode": "fixed_stratified_phases_8_1_1",
68
+ "split_repeat_index": 10,
69
+ "split_seed": 723450912,
70
+ "split_type": "80_10_10",
71
+ "strategy": 3,
72
+ "strategy2_checkpoint_mode": "best",
73
+ "strategy2_checkpoint_path": "/workspace/runs/UPerNet_PVTv2_b2/repeated_holdout/stratified_holdout_v1/phase_010/pct_100/repeat_01/strategy_2/final/checkpoints/best.pt",
74
+ "strategy3_advantage_normalize": false,
75
+ "strategy3_aux_boundary_dice_weight": 0.6979509040767587,
76
+ "strategy3_aux_ce_anneal_epochs": 15,
77
+ "strategy3_aux_ce_anneal_start_epoch": 25,
78
+ "strategy3_aux_ce_floor_fraction": 0.1,
79
+ "strategy3_aux_ce_weight": 0.4,
80
+ "strategy3_decoder_ce_weight": 0.0,
81
+ "strategy3_decoder_dice_weight": 0.0,
82
+ "strategy3_delta_max": 0.1,
83
+ "strategy3_exploration_eps": 0.1,
84
+ "strategy3_exploration_eps_epochs": 20,
85
+ "strategy3_freeze_bootstrapped_segmentation": true,
86
+ "strategy3_mc_disk_cache_enabled": true,
87
+ "strategy3_mc_disk_cache_read": true,
88
+ "strategy3_mc_disk_cache_write": true,
89
+ "strategy3_mc_dropout_enabled": true,
90
+ "strategy3_mc_dropout_p": 0.2,
91
+ "strategy3_mc_dropout_samples": 5,
92
+ "strategy3_r1_progress_weight": 1.0,
93
+ "strategy3_rl_grad_clip_norm": 0.25,
94
+ "strategy3_rl_loss_scale": 10.0,
95
+ "strategy3_sam_attention_grid": 64,
96
+ "strategy3_variant": "lite",
97
+ "subset_manifest_path": "/workspace/runs/UPerNet_PVTv2_b2/repeated_holdout/stratified_holdout_v1/manifests/subsets/phase_010_pct_100_repeat_01.json",
98
+ "subset_repeat_index": 1,
99
+ "subset_sampling_source": "incremental_chain",
100
+ "subset_seed": 1653428179,
101
+ "threshold": 0.5922320465492188,
102
+ "tmax": 8,
103
+ "train_resume_mode": "off",
104
+ "train_resume_specific_checkpoint": "",
105
+ "train_subset_key": "100",
106
+ "train_subset_source": "incremental_chain",
107
+ "train_subset_variant": 1,
108
+ "vgg_feature_dilation": 1,
109
+ "vgg_feature_scales": 4,
110
+ "weight_decay": 2.7012557725439094e-06,
111
+ "write_epoch_diagnostic": false
112
+ }
runs/UPerNet_PVTv2_b2/repeated_holdout/stratified_holdout_v1/phase_010/pct_100/repeat_01/strategy_3/final/summary.json ADDED
@@ -0,0 +1,34 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ {
2
+ "best_epoch": 72,
3
+ "best_model_metric": 0.5724109242210832,
4
+ "best_model_metric_name": "val_refine_score",
5
+ "best_val_biou": 0.437004029666552,
6
+ "best_val_biou_gain": 0.05234464183570231,
7
+ "best_val_dice": 0.7927068797303527,
8
+ "best_val_iou": 0.708380159951118,
9
+ "best_val_iou_gain": 0.02820180307914244,
10
+ "device_used": "cuda",
11
+ "early_stopping_best_value": 0.5724109242210832,
12
+ "early_stopping_min_delta": 0.0,
13
+ "early_stopping_monitor_mode": "max",
14
+ "early_stopping_monitor_name": "val_refine_score",
15
+ "early_stopping_patience": 30,
16
+ "early_stopping_start_epoch": 30,
17
+ "elapsed_seconds": 1276.2680625915527,
18
+ "epochs_to_best_checkpoint": 72,
19
+ "final_epoch": 102,
20
+ "gpu_name": "NVIDIA A100 80GB PCIe",
21
+ "resumed": false,
22
+ "run_type": "final",
23
+ "seconds_per_epoch": 12.512431986191693,
24
+ "seconds_per_epoch_measured_mean": 12.408194299632063,
25
+ "seconds_per_epoch_measured_std": 0.8456643552471369,
26
+ "strategy": 3,
27
+ "strategy3_bootstrap_loaded": true,
28
+ "strategy3_decoder_state": "frozen",
29
+ "strategy3_encoder_state": "frozen",
30
+ "strategy3_freeze_active": true,
31
+ "strategy3_freeze_requested": true,
32
+ "strategy3_segmentation_head_state": "frozen",
33
+ "time_to_best_seconds": 894.9727710350417
34
+ }
runs/UPerNet_PVTv2_b2/repeated_holdout/stratified_holdout_v1/phase_010/pct_100/repeat_01/strategy_3/final/timing.csv ADDED
@@ -0,0 +1,2 @@
 
 
 
1
+ scope,strategy,tmax,device,num_batches,num_samples,total_inference_ms,avg_batch_inference_ms,std_batch_inference_ms,avg_sample_inference_ms,std_sample_inference_ms,mean_per_image_inference_ms,std_per_image_inference_ms,mean_per_image_inference_seconds,std_per_image_inference_seconds
2
+ test_set_evaluation,3,8,cuda,2,64,623.334601,311.667301,139.421997,9.739603,0.592205,9.739603,0.592205,0.009739603,0.000592205
runs/UPerNet_PVTv2_b2/repeated_holdout/stratified_holdout_v1/phase_timing_summary.json ADDED
@@ -0,0 +1,155 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ {
2
+ "definition": "training elapsed_seconds from summary.json, falling back to the ledger checkpoint elapsed_seconds",
3
+ "phase_count": 5,
4
+ "phases": [
5
+ {
6
+ "completed_strategies": [
7
+ 2,
8
+ 3
9
+ ],
10
+ "completed_strategy_count": 2,
11
+ "phase_index": 2,
12
+ "runs": [
13
+ {
14
+ "dataset_percent": 100,
15
+ "phase_index": 2,
16
+ "run_dir": "/workspace/runs/UPerNet_PVTv2_b2/repeated_holdout/stratified_holdout_v1/phase_002/pct_100/repeat_01/strategy_2/final",
17
+ "strategy": 2,
18
+ "subset_repeat_index": 1,
19
+ "training_elapsed_seconds": 377.0015754699707
20
+ },
21
+ {
22
+ "dataset_percent": 100,
23
+ "phase_index": 2,
24
+ "run_dir": "/workspace/runs/UPerNet_PVTv2_b2/repeated_holdout/stratified_holdout_v1/phase_002/pct_100/repeat_01/strategy_3/final",
25
+ "strategy": 3,
26
+ "subset_repeat_index": 1,
27
+ "training_elapsed_seconds": 1512.7809295654297
28
+ }
29
+ ],
30
+ "training_elapsed_seconds_mean": 944.8912525177002,
31
+ "training_elapsed_seconds_std": 567.8896770477295,
32
+ "updated_at": "2026-08-03T14:08:36.540222+00:00"
33
+ },
34
+ {
35
+ "completed_strategies": [
36
+ 2,
37
+ 3
38
+ ],
39
+ "completed_strategy_count": 2,
40
+ "phase_index": 3,
41
+ "runs": [
42
+ {
43
+ "dataset_percent": 100,
44
+ "phase_index": 3,
45
+ "run_dir": "/workspace/runs/UPerNet_PVTv2_b2/repeated_holdout/stratified_holdout_v1/phase_003/pct_100/repeat_01/strategy_2/final",
46
+ "strategy": 2,
47
+ "subset_repeat_index": 1,
48
+ "training_elapsed_seconds": 123.31218004226685
49
+ },
50
+ {
51
+ "dataset_percent": 100,
52
+ "phase_index": 3,
53
+ "run_dir": "/workspace/runs/UPerNet_PVTv2_b2/repeated_holdout/stratified_holdout_v1/phase_003/pct_100/repeat_01/strategy_3/final",
54
+ "strategy": 3,
55
+ "subset_repeat_index": 1,
56
+ "training_elapsed_seconds": 1497.953530550003
57
+ }
58
+ ],
59
+ "training_elapsed_seconds_mean": 810.632855296135,
60
+ "training_elapsed_seconds_std": 687.3206752538681,
61
+ "updated_at": "2026-08-03T14:39:36.867555+00:00"
62
+ },
63
+ {
64
+ "completed_strategies": [
65
+ 2,
66
+ 3
67
+ ],
68
+ "completed_strategy_count": 2,
69
+ "phase_index": 4,
70
+ "runs": [
71
+ {
72
+ "dataset_percent": 100,
73
+ "phase_index": 4,
74
+ "run_dir": "/workspace/runs/UPerNet_PVTv2_b2/repeated_holdout/stratified_holdout_v1/phase_004/pct_100/repeat_01/strategy_2/final",
75
+ "strategy": 2,
76
+ "subset_repeat_index": 1,
77
+ "training_elapsed_seconds": 125.54964017868042
78
+ },
79
+ {
80
+ "dataset_percent": 100,
81
+ "phase_index": 4,
82
+ "run_dir": "/workspace/runs/UPerNet_PVTv2_b2/repeated_holdout/stratified_holdout_v1/phase_004/pct_100/repeat_01/strategy_3/final",
83
+ "strategy": 3,
84
+ "subset_repeat_index": 1,
85
+ "training_elapsed_seconds": 1488.3410377502441
86
+ }
87
+ ],
88
+ "training_elapsed_seconds_mean": 806.9453389644623,
89
+ "training_elapsed_seconds_std": 681.3956987857819,
90
+ "updated_at": "2026-08-03T15:10:30.882697+00:00"
91
+ },
92
+ {
93
+ "completed_strategies": [
94
+ 2,
95
+ 3
96
+ ],
97
+ "completed_strategy_count": 2,
98
+ "phase_index": 9,
99
+ "runs": [
100
+ {
101
+ "dataset_percent": 100,
102
+ "phase_index": 9,
103
+ "run_dir": "/workspace/runs/UPerNet_PVTv2_b2/repeated_holdout/stratified_holdout_v1/phase_009/pct_100/repeat_01/strategy_2/final",
104
+ "strategy": 2,
105
+ "subset_repeat_index": 1,
106
+ "training_elapsed_seconds": 155.30842065811157
107
+ },
108
+ {
109
+ "dataset_percent": 100,
110
+ "phase_index": 9,
111
+ "run_dir": "/workspace/runs/UPerNet_PVTv2_b2/repeated_holdout/stratified_holdout_v1/phase_009/pct_100/repeat_01/strategy_3/final",
112
+ "strategy": 3,
113
+ "subset_repeat_index": 1,
114
+ "training_elapsed_seconds": 1512.5201861858368
115
+ }
116
+ ],
117
+ "training_elapsed_seconds_mean": 833.9143034219742,
118
+ "training_elapsed_seconds_std": 678.6058827638626,
119
+ "updated_at": "2026-08-03T15:42:04.569624+00:00"
120
+ },
121
+ {
122
+ "completed_strategies": [
123
+ 2,
124
+ 3
125
+ ],
126
+ "completed_strategy_count": 2,
127
+ "phase_index": 10,
128
+ "runs": [
129
+ {
130
+ "dataset_percent": 100,
131
+ "phase_index": 10,
132
+ "run_dir": "/workspace/runs/UPerNet_PVTv2_b2/repeated_holdout/stratified_holdout_v1/phase_010/pct_100/repeat_01/strategy_2/final",
133
+ "strategy": 2,
134
+ "subset_repeat_index": 1,
135
+ "training_elapsed_seconds": 127.74087882041931
136
+ },
137
+ {
138
+ "dataset_percent": 100,
139
+ "phase_index": 10,
140
+ "run_dir": "/workspace/runs/UPerNet_PVTv2_b2/repeated_holdout/stratified_holdout_v1/phase_010/pct_100/repeat_01/strategy_3/final",
141
+ "strategy": 3,
142
+ "subset_repeat_index": 1,
143
+ "training_elapsed_seconds": 1276.2680625915527
144
+ }
145
+ ],
146
+ "training_elapsed_seconds_mean": 702.004470705986,
147
+ "training_elapsed_seconds_std": 574.2635918855667,
148
+ "updated_at": "2026-08-03T16:09:05.516969+00:00"
149
+ }
150
+ ],
151
+ "scope": "fixed_phase_training_time",
152
+ "training_elapsed_seconds_mean_across_phases": 819.6776441812515,
153
+ "training_elapsed_seconds_std_across_phases": 77.42354388274894,
154
+ "updated_at": "2026-08-03T16:09:05.517103+00:00"
155
+ }
runs/_plots/summary_s2_vs_s3.csv ADDED
@@ -0,0 +1,13 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ model,strategy,metric,mean,std,n_phases
2
+ UPerNet_PVTv2_b2,2,biou,0.387658,0.018166,5
3
+ UPerNet_PVTv2_b2,2,biou_contour,0.106588,0.007340,5
4
+ UPerNet_PVTv2_b2,2,infer_ms,1.381536,0.387893,5
5
+ UPerNet_PVTv2_b2,2,train_min,3.029709,1.638305,5
6
+ UPerNet_PVTv2_b2,2,epoch_sec,1.894138,0.952402,5
7
+ UPerNet_PVTv2_b2,2,time_to_best_min,2.572189,1.699196,5
8
+ UPerNet_PVTv2_b2,3,biou,0.451670,0.030928,5
9
+ UPerNet_PVTv2_b2,3,biou_contour,0.159780,0.021218,5
10
+ UPerNet_PVTv2_b2,3,infer_ms,9.926945,0.148849,5
11
+ UPerNet_PVTv2_b2,3,train_min,24.292879,1.518696,5
12
+ UPerNet_PVTv2_b2,3,epoch_sec,12.521813,0.077118,5
13
+ UPerNet_PVTv2_b2,3,time_to_best_min,19.787100,2.816359,5
runs/_stats/ALL_MODELS_summary.csv ADDED
@@ -0,0 +1,15 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ Model,Metric,Level,n_pairs,S3_minus_S2,Wilcoxon_p_raw,p_Holm_global,Sig_global,Better_arm,Cohens_dz,boot_CI_low,boot_CI_high
2
+ UPerNet_PVTv2_b2,biou_contour,per_image,323,0.05323689972250793,5.718497206218795e-26,2.287398882487518e-24,Yes,S3 (refinement),0.5976812828087569,0.04388856770935864,0.0631788819574603
3
+ UPerNet_PVTv2_b2,biou_contour,phase_level,5,0.05319270071814397,0.0625,0.904454777261137,No,n.s.,2.7898246582797013,0.03994488089272243,0.06847578049149965
4
+ UPerNet_PVTv2_b2,biou,per_image,323,0.06405450550476223,1.7289307098031236e-35,7.261508981173119e-34,Yes,S3 (refinement),0.7106123430299262,0.054621372643315846,0.07419702627070363
5
+ UPerNet_PVTv2_b2,biou,phase_level,5,0.06401235940982118,0.0625,0.904454777261137,No,n.s.,3.2112497773429203,0.04877197464166473,0.07925274417797765
6
+ UPerNet_PVTv2_b2,dice,per_image,323,0.024717042764589976,1.6137224260354095e-21,5.970772976331016e-20,Yes,S3 (refinement),0.3369163551465658,0.01758011096126462,0.033468297370947586
7
+ UPerNet_PVTv2_b2,dice,phase_level,5,0.024705393755753292,0.0625,0.904454777261137,No,n.s.,2.355188925592429,0.01679677571245599,0.032571750830933756
8
+ UPerNet_PVTv2_b2,iou,per_image,323,0.03349147755422749,8.927138942126266e-23,3.392312798007981e-21,Yes,S3 (refinement),0.4283906438768904,0.025532213233220028,0.04245785713177373
9
+ UPerNet_PVTv2_b2,iou,phase_level,5,0.0334679205953595,0.0625,0.904454777261137,No,n.s.,2.6542353345316627,0.023657582805408372,0.04327825838531063
10
+ UPerNet_PVTv2_b2,ppv,per_image,323,0.015432132519286663,9.692831383221536e-21,3.489419297959753e-19,Yes,S3 (refinement),0.14679531799469125,0.003600603527365194,0.026376065855223244
11
+ UPerNet_PVTv2_b2,ppv,phase_level,5,0.015397503612966967,0.0625,0.904454777261137,No,n.s.,1.1086750057065942,0.005221036805826839,0.026911534432880545
12
+ UPerNet_PVTv2_b2,sen,per_image,323,0.018927612716654368,0.028008282190094113,0.5041490794216941,No,S3 (refinement),0.22135844946187674,0.01042786989469917,0.02880240613683837
13
+ UPerNet_PVTv2_b2,sen,phase_level,5,0.018952392346317716,0.0625,0.904454777261137,No,n.s.,1.660638095810431,0.010383693878889844,0.028426579776123572
14
+ UPerNet_PVTv2_b2,hd95,per_image,323,-1.30639897336755,1.4906865581005058e-05,0.0004919265641731669,Yes,S3 (refinement),-0.11436884240155197,-2.6939560695612763,-0.26375395856774686
15
+ UPerNet_PVTv2_b2,hd95,phase_level,5,-1.301247094144427,0.0625,0.904454777261137,No,n.s.,-1.4379107639344506,-2.0157415708953055,-0.5867526173935488
runs/_stats/ALL_MODELS_summary.xlsx ADDED
Binary file (6.73 kB). View file