Download envs/kitoverlay/skimage/draw/_random_shapes.py from AVSim/simulation-package: direct link, hf CLI and curl.
- Browser
- Download file 16 kB
-
https://huggingface.co/datasets/AVSim/simulation-package/resolve/main/envs/kitoverlay/skimage/draw/_random_shapes.py
- Command line
-
hf download hf://datasets/AVSim/simulation-package/envs/kitoverlay/skimage/draw/_random_shapes.py
-
curl -L -o _random_shapes.py https://huggingface.co/datasets/AVSim/simulation-package/resolve/main/envs/kitoverlay/skimage/draw/_random_shapes.py
16 kB
| import math | |
| import numpy as np | |
| from .draw import polygon as draw_polygon, disk as draw_disk, ellipse as draw_ellipse | |
| from .._shared.utils import warn | |
| def _generate_rectangle_mask(point, image, shape, random): | |
| """Generate a mask for a filled rectangle shape. | |
| The height and width of the rectangle are generated randomly. | |
| Parameters | |
| ---------- | |
| point : tuple | |
| The row and column of the top left corner of the rectangle. | |
| image : tuple | |
| The height, width and depth of the image into which the shape | |
| is placed. | |
| shape : tuple | |
| The minimum and maximum size of the shape to fit. | |
| random : `numpy.random.Generator` | |
| The random state to use for random sampling. | |
| Raises | |
| ------ | |
| ArithmeticError | |
| When a shape cannot be fit into the image with the given starting | |
| coordinates. This usually means the image dimensions are too small or | |
| shape dimensions too large. | |
| Returns | |
| ------- | |
| label : tuple | |
| A (category, ((r0, r1), (c0, c1))) tuple specifying the category and | |
| bounding box coordinates of the shape. | |
| indices : 2-D array | |
| A mask of indices that the shape fills. | |
| """ | |
| available_width = min(image[1] - point[1], shape[1]) - shape[0] | |
| available_height = min(image[0] - point[0], shape[1]) - shape[0] | |
| # Pick random widths and heights. | |
| r = shape[0] + random.integers(max(1, available_height)) - 1 | |
| c = shape[0] + random.integers(max(1, available_width)) - 1 | |
| rectangle = draw_polygon( | |
| [ | |
| point[0], | |
| point[0] + r, | |
| point[0] + r, | |
| point[0], | |
| ], | |
| [ | |
| point[1], | |
| point[1], | |
| point[1] + c, | |
| point[1] + c, | |
| ], | |
| ) | |
| label = ('rectangle', ((point[0], point[0] + r + 1), (point[1], point[1] + c + 1))) | |
| return rectangle, label | |
| def _generate_circle_mask(point, image, shape, random): | |
| """Generate a mask for a filled circle shape. | |
| The radius of the circle is generated randomly. | |
| Parameters | |
| ---------- | |
| point : tuple | |
| The row and column of the top left corner of the rectangle. | |
| image : tuple | |
| The height, width and depth of the image into which the shape is placed. | |
| shape : tuple | |
| The minimum and maximum size and color of the shape to fit. | |
| random : `numpy.random.Generator` | |
| The random state to use for random sampling. | |
| Raises | |
| ------ | |
| ArithmeticError | |
| When a shape cannot be fit into the image with the given starting | |
| coordinates. This usually means the image dimensions are too small or | |
| shape dimensions too large. | |
| Returns | |
| ------- | |
| label : tuple | |
| A (category, ((r0, r1), (c0, c1))) tuple specifying the category and | |
| bounding box coordinates of the shape. | |
| indices : 2-D array | |
| A mask of indices that the shape fills. | |
| """ | |
| if shape[0] == 1 or shape[1] == 1: | |
| raise ValueError('size must be > 1 for circles') | |
| min_radius = shape[0] // 2.0 | |
| max_radius = shape[1] // 2.0 | |
| left = point[1] | |
| right = image[1] - point[1] | |
| top = point[0] | |
| bottom = image[0] - point[0] | |
| available_radius = min(left, right, top, bottom, max_radius) - min_radius | |
| if available_radius < 0: | |
| raise ArithmeticError('cannot fit shape to image') | |
| radius = int(min_radius + random.integers(max(1, available_radius))) | |
| # TODO: think about how to deprecate this | |
| # while draw_circle was deprecated in favor of draw_disk | |
| # switching to a label of 'disk' here | |
| # would be a breaking change for downstream libraries | |
| # See discussion on naming convention here | |
| # https://github.com/scikit-image/scikit-image/pull/4428 | |
| disk = draw_disk((point[0], point[1]), radius) | |
| # Until a deprecation path is decided, always return `'circle'` | |
| label = ( | |
| 'circle', | |
| ( | |
| (point[0] - radius + 1, point[0] + radius), | |
| (point[1] - radius + 1, point[1] + radius), | |
| ), | |
| ) | |
| return disk, label | |
| def _generate_triangle_mask(point, image, shape, random): | |
| """Generate a mask for a filled equilateral triangle shape. | |
| The length of the sides of the triangle is generated randomly. | |
| Parameters | |
| ---------- | |
| point : tuple | |
| The row and column of the top left corner of a up-pointing triangle. | |
| image : tuple | |
| The height, width and depth of the image into which the shape | |
| is placed. | |
| shape : tuple | |
| The minimum and maximum size and color of the shape to fit. | |
| random : `numpy.random.Generator` | |
| The random state to use for random sampling. | |
| Raises | |
| ------ | |
| ArithmeticError | |
| When a shape cannot be fit into the image with the given starting | |
| coordinates. This usually means the image dimensions are too small or | |
| shape dimensions too large. | |
| Returns | |
| ------- | |
| label : tuple | |
| A (category, ((r0, r1), (c0, c1))) tuple specifying the category and | |
| bounding box coordinates of the shape. | |
| indices : 2-D array | |
| A mask of indices that the shape fills. | |
| """ | |
| if shape[0] == 1 or shape[1] == 1: | |
| raise ValueError('dimension must be > 1 for triangles') | |
| available_side = min(image[1] - point[1], point[0], shape[1]) - shape[0] | |
| side = shape[0] + random.integers(max(1, available_side)) - 1 | |
| triangle_height = int(np.ceil(np.sqrt(3 / 4.0) * side)) | |
| triangle = draw_polygon( | |
| [ | |
| point[0], | |
| point[0] - triangle_height, | |
| point[0], | |
| ], | |
| [ | |
| point[1], | |
| point[1] + side // 2, | |
| point[1] + side, | |
| ], | |
| ) | |
| label = ( | |
| 'triangle', | |
| ((point[0] - triangle_height, point[0] + 1), (point[1], point[1] + side + 1)), | |
| ) | |
| return triangle, label | |
| def _generate_ellipse_mask(point, image, shape, random): | |
| """Generate a mask for a filled ellipse shape. | |
| The rotation, major and minor semi-axes of the ellipse are generated | |
| randomly. | |
| Parameters | |
| ---------- | |
| point : tuple | |
| The row and column of the top left corner of the rectangle. | |
| image : tuple | |
| The height, width and depth of the image into which the shape is | |
| placed. | |
| shape : tuple | |
| The minimum and maximum size and color of the shape to fit. | |
| random : `numpy.random.Generator` | |
| The random state to use for random sampling. | |
| Raises | |
| ------ | |
| ArithmeticError | |
| When a shape cannot be fit into the image with the given starting | |
| coordinates. This usually means the image dimensions are too small or | |
| shape dimensions too large. | |
| Returns | |
| ------- | |
| label : tuple | |
| A (category, ((r0, r1), (c0, c1))) tuple specifying the category and | |
| bounding box coordinates of the shape. | |
| indices : 2-D array | |
| A mask of indices that the shape fills. | |
| """ | |
| if shape[0] == 1 or shape[1] == 1: | |
| raise ValueError('size must be > 1 for ellipses') | |
| min_radius = shape[0] / 2.0 | |
| max_radius = shape[1] / 2.0 | |
| left = point[1] | |
| right = image[1] - point[1] | |
| top = point[0] | |
| bottom = image[0] - point[0] | |
| available_radius = min(left, right, top, bottom, max_radius) | |
| if available_radius < min_radius: | |
| raise ArithmeticError('cannot fit shape to image') | |
| # NOTE: very conservative because we could take into account the fact that | |
| # we have 2 different radii, but this is a good first approximation. | |
| # Also, we can afford to have a uniform sampling because the ellipse will | |
| # be rotated. | |
| r_radius = random.uniform(min_radius, available_radius + 1) | |
| c_radius = random.uniform(min_radius, available_radius + 1) | |
| rotation = random.uniform(-np.pi, np.pi) | |
| ellipse = draw_ellipse( | |
| point[0], | |
| point[1], | |
| r_radius, | |
| c_radius, | |
| shape=image[:2], | |
| rotation=rotation, | |
| ) | |
| max_radius = math.ceil(max(r_radius, c_radius)) | |
| min_x = np.min(ellipse[0]) | |
| max_x = np.max(ellipse[0]) + 1 | |
| min_y = np.min(ellipse[1]) | |
| max_y = np.max(ellipse[1]) + 1 | |
| label = ('ellipse', ((min_x, max_x), (min_y, max_y))) | |
| return ellipse, label | |
| # Allows lookup by key as well as random selection. | |
| SHAPE_GENERATORS = dict( | |
| rectangle=_generate_rectangle_mask, | |
| circle=_generate_circle_mask, | |
| triangle=_generate_triangle_mask, | |
| ellipse=_generate_ellipse_mask, | |
| ) | |
| SHAPE_CHOICES = list(SHAPE_GENERATORS.values()) | |
| def _generate_random_colors(num_colors, num_channels, intensity_range, random): | |
| """Generate an array of random colors. | |
| Parameters | |
| ---------- | |
| num_colors : int | |
| Number of colors to generate. | |
| num_channels : int | |
| Number of elements representing color. | |
| intensity_range : {tuple of tuples of ints, tuple of ints}, optional | |
| The range of values to sample pixel values from. For grayscale images | |
| the format is (min, max). For multichannel - ((min, max),) if the | |
| ranges are equal across the channels, and | |
| ((min_0, max_0), ... (min_N, max_N)) if they differ. | |
| random : `numpy.random.Generator` | |
| The random state to use for random sampling. | |
| Raises | |
| ------ | |
| ValueError | |
| When the `intensity_range` is not in the interval (0, 255). | |
| Returns | |
| ------- | |
| colors : array | |
| An array of shape (num_colors, num_channels), where the values for | |
| each channel are drawn from the corresponding `intensity_range`. | |
| """ | |
| if num_channels == 1: | |
| intensity_range = (intensity_range,) | |
| elif len(intensity_range) == 1: | |
| intensity_range = intensity_range * num_channels | |
| colors = [random.integers(r[0], r[1] + 1, size=num_colors) for r in intensity_range] | |
| return np.transpose(colors) | |
| def random_shapes( | |
| image_shape, | |
| max_shapes, | |
| min_shapes=1, | |
| min_size=2, | |
| max_size=None, | |
| num_channels=3, | |
| shape=None, | |
| intensity_range=None, | |
| allow_overlap=False, | |
| num_trials=100, | |
| rng=None, | |
| *, | |
| channel_axis=-1, | |
| ): | |
| """Generate an image with random shapes, labeled with bounding boxes. | |
| The image is populated with random shapes with random sizes, random | |
| locations, and random colors, with or without overlap. | |
| Shapes have random (row, col) starting coordinates and random sizes bounded | |
| by `min_size` and `max_size`. It can occur that a randomly generated shape | |
| will not fit the image at all. In that case, the algorithm will try again | |
| with new starting coordinates a certain number of times. However, it also | |
| means that some shapes may be skipped altogether. In that case, this | |
| function will generate fewer shapes than requested. | |
| Parameters | |
| ---------- | |
| image_shape : tuple | |
| The number of rows and columns of the image to generate. | |
| max_shapes : int | |
| The maximum number of shapes to (attempt to) fit into the shape. | |
| min_shapes : int, optional | |
| The minimum number of shapes to (attempt to) fit into the shape. | |
| min_size : int, optional | |
| The minimum dimension of each shape to fit into the image. | |
| max_size : int, optional | |
| The maximum dimension of each shape to fit into the image. | |
| num_channels : int, optional | |
| Number of channels in the generated image. If 1, generate monochrome | |
| images, else color images with multiple channels. Ignored if | |
| ``multichannel`` is set to False. | |
| shape : {rectangle, circle, triangle, ellipse, None} str, optional | |
| The name of the shape to generate or `None` to pick random ones. | |
| intensity_range : {tuple of tuples of uint8, tuple of uint8}, optional | |
| The range of values to sample pixel values from. For grayscale | |
| images the format is (min, max). For multichannel - ((min, max),) | |
| if the ranges are equal across the channels, and | |
| ((min_0, max_0), ... (min_N, max_N)) if they differ. As the | |
| function supports generation of uint8 arrays only, the maximum | |
| range is (0, 255). If None, set to (0, 254) for each channel | |
| reserving color of intensity = 255 for background. | |
| allow_overlap : bool, optional | |
| If `True`, allow shapes to overlap. | |
| num_trials : int, optional | |
| How often to attempt to fit a shape into the image before skipping it. | |
| rng : {`numpy.random.Generator`, int}, optional | |
| Pseudo-random number generator. | |
| By default, a PCG64 generator is used (see :func:`numpy.random.default_rng`). | |
| If `rng` is an int, it is used to seed the generator. | |
| channel_axis : int or None, optional | |
| If None, the image is assumed to be a grayscale (single channel) image. | |
| Otherwise, this parameter indicates which axis of the array corresponds | |
| to channels. | |
| .. versionadded:: 0.19 | |
| ``channel_axis`` was added in 0.19. | |
| Returns | |
| ------- | |
| image : uint8 array | |
| An image with the fitted shapes. | |
| labels : list | |
| A list of labels, one per shape in the image. Each label is a | |
| (category, ((r0, r1), (c0, c1))) tuple specifying the category and | |
| bounding box coordinates of the shape. | |
| Examples | |
| -------- | |
| >>> import skimage.draw | |
| >>> image, labels = skimage.draw.random_shapes((32, 32), max_shapes=3) | |
| >>> image # doctest: +SKIP | |
| array([ | |
| [[255, 255, 255], | |
| [255, 255, 255], | |
| [255, 255, 255], | |
| ..., | |
| [255, 255, 255], | |
| [255, 255, 255], | |
| [255, 255, 255]]], dtype=uint8) | |
| >>> labels # doctest: +SKIP | |
| [('circle', ((22, 18), (25, 21))), | |
| ('triangle', ((5, 6), (13, 13)))] | |
| """ | |
| if min_size > image_shape[0] or min_size > image_shape[1]: | |
| raise ValueError('Minimum dimension must be less than ncols and nrows') | |
| max_size = max_size or max(image_shape[0], image_shape[1]) | |
| if channel_axis is None: | |
| num_channels = 1 | |
| if intensity_range is None: | |
| intensity_range = (0, 254) if num_channels == 1 else ((0, 254),) | |
| else: | |
| tmp = (intensity_range,) if num_channels == 1 else intensity_range | |
| for intensity_pair in tmp: | |
| for intensity in intensity_pair: | |
| if not (0 <= intensity <= 255): | |
| msg = 'Intensity range must lie within (0, 255) interval' | |
| raise ValueError(msg) | |
| rng = np.random.default_rng(rng) | |
| user_shape = shape | |
| image_shape = (image_shape[0], image_shape[1], num_channels) | |
| image = np.full(image_shape, 255, dtype=np.uint8) | |
| filled = np.zeros(image_shape, dtype=bool) | |
| labels = [] | |
| num_shapes = rng.integers(min_shapes, max_shapes + 1) | |
| colors = _generate_random_colors(num_shapes, num_channels, intensity_range, rng) | |
| shape = (min_size, max_size) | |
| for shape_idx in range(num_shapes): | |
| if user_shape is None: | |
| shape_generator = rng.choice(SHAPE_CHOICES) | |
| else: | |
| shape_generator = SHAPE_GENERATORS[user_shape] | |
| for _ in range(num_trials): | |
| # Pick start coordinates. | |
| column = rng.integers(max(1, image_shape[1] - min_size)) | |
| row = rng.integers(max(1, image_shape[0] - min_size)) | |
| point = (row, column) | |
| try: | |
| indices, label = shape_generator(point, image_shape, shape, rng) | |
| except ArithmeticError: | |
| # Couldn't fit the shape, skip it. | |
| indices = [] | |
| continue | |
| # Check if there is an overlap where the mask is nonzero. | |
| if allow_overlap or not filled[indices].any(): | |
| image[indices] = colors[shape_idx] | |
| filled[indices] = True | |
| labels.append(label) | |
| break | |
| else: | |
| warn( | |
| 'Could not fit any shapes to image, ' | |
| 'consider reducing the minimum dimension' | |
| ) | |
| if channel_axis is None: | |
| image = np.squeeze(image, axis=2) | |
| else: | |
| image = np.moveaxis(image, -1, channel_axis) | |
| return image, labels | |