Download envs/kitoverlay/skimage/registration/_optical_flow_utils.py from AVSim/simulation-package: direct link, hf CLI and curl.
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3.68 kB
| """Common tools to optical flow algorithms.""" | |
| import numpy as np | |
| from scipy import ndimage as ndi | |
| from ..transform import pyramid_reduce | |
| from ..util.dtype import _convert | |
| def _get_warp_points(grid, flow): | |
| """Compute warp point coordinates. | |
| Parameters | |
| ---------- | |
| grid : iterable | |
| The sparse grid to be warped (obtained using | |
| ``np.meshgrid(..., sparse=True)).``) | |
| flow : ndarray | |
| The warping motion field. | |
| Returns | |
| ------- | |
| out : ndarray | |
| The warp point coordinates. | |
| """ | |
| out = flow.copy() | |
| for idx, g in enumerate(grid): | |
| out[idx, ...] += g | |
| return out | |
| def _resize_flow(flow, shape): | |
| """Rescale the values of the vector field (u, v) to the desired shape. | |
| The values of the output vector field are scaled to the new | |
| resolution. | |
| Parameters | |
| ---------- | |
| flow : ndarray | |
| The motion field to be processed. | |
| shape : iterable | |
| Couple of integers representing the output shape. | |
| Returns | |
| ------- | |
| rflow : ndarray | |
| The resized and rescaled motion field. | |
| """ | |
| scale = [n / o for n, o in zip(shape, flow.shape[1:])] | |
| scale_factor = np.array(scale, dtype=flow.dtype) | |
| for _ in shape: | |
| scale_factor = scale_factor[..., np.newaxis] | |
| rflow = scale_factor * ndi.zoom( | |
| flow, [1] + scale, order=0, mode='nearest', prefilter=False | |
| ) | |
| return rflow | |
| def _get_pyramid(I, downscale=2.0, nlevel=10, min_size=16): | |
| """Construct image pyramid. | |
| Parameters | |
| ---------- | |
| I : ndarray | |
| The image to be preprocessed (Grayscale or RGB). | |
| downscale : float | |
| The pyramid downscale factor. | |
| nlevel : int | |
| The maximum number of pyramid levels. | |
| min_size : int | |
| The minimum size for any dimension of the pyramid levels. | |
| Returns | |
| ------- | |
| pyramid : list[ndarray] | |
| The coarse to fine images pyramid. | |
| """ | |
| pyramid = [I] | |
| size = min(I.shape) | |
| count = 1 | |
| while (count < nlevel) and (size > downscale * min_size): | |
| J = pyramid_reduce(pyramid[-1], downscale, channel_axis=None) | |
| pyramid.append(J) | |
| size = min(J.shape) | |
| count += 1 | |
| return pyramid[::-1] | |
| def _coarse_to_fine( | |
| I0, I1, solver, downscale=2, nlevel=10, min_size=16, dtype=np.float32 | |
| ): | |
| """Generic coarse to fine solver. | |
| Parameters | |
| ---------- | |
| I0 : ndarray | |
| The first grayscale image of the sequence. | |
| I1 : ndarray | |
| The second grayscale image of the sequence. | |
| solver : callable | |
| The solver applied at each pyramid level. | |
| downscale : float | |
| The pyramid downscale factor. | |
| nlevel : int | |
| The maximum number of pyramid levels. | |
| min_size : int | |
| The minimum size for any dimension of the pyramid levels. | |
| dtype : dtype | |
| Output data type. | |
| Returns | |
| ------- | |
| flow : ndarray | |
| The estimated optical flow components for each axis. | |
| """ | |
| if I0.shape != I1.shape: | |
| raise ValueError("Input images should have the same shape") | |
| if np.dtype(dtype).char not in 'efdg': | |
| raise ValueError("Only floating point data type are valid" " for optical flow") | |
| pyramid = list( | |
| zip( | |
| _get_pyramid(_convert(I0, dtype), downscale, nlevel, min_size), | |
| _get_pyramid(_convert(I1, dtype), downscale, nlevel, min_size), | |
| ) | |
| ) | |
| # Initialization to 0 at coarsest level. | |
| flow = np.zeros((pyramid[0][0].ndim,) + pyramid[0][0].shape, dtype=dtype) | |
| flow = solver(pyramid[0][0], pyramid[0][1], flow) | |
| for J0, J1 in pyramid[1:]: | |
| flow = solver(J0, J1, _resize_flow(flow, J0.shape)) | |
| return flow | |