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StepProbe: End-to-End Evaluation Pipeline
Orchestrates the full pipeline:
inference -> segment -> diagnose -> metrics -> restore -> re-evaluate
Usage:
python scripts/run_eval.py --config configs/default.yaml
python scripts/run_eval.py --model deepseek-ai/DeepSeek-R1-Distill-Qwen-7B --benchmark gsm8k --quick
"""
import argparse
import json
import os
import sys
import time
from datetime import datetime
import yaml
sys.path.insert(0, os.path.dirname(os.path.dirname(os.path.abspath(__file__))))
from stepprobe.segment import segment_cot
from stepprobe.align import align_steps, alignment_summary
from stepprobe.diagnose import diagnose_batch, LLMJudge, RuleBasedJudge
from stepprobe.metrics import aggregate_metrics, format_results_table
from stepprobe.utils import load_jsonl, save_jsonl, save_json, set_seed, check_answer, extract_gsm8k_answer, extract_number
def run_inference_phase(model_name, quant, bits, benchmark, output_dir, max_samples=None, max_tokens=4096):
"""Run inference and return path to output file."""
from scripts.run_inference import load_model, load_benchmark, generate_cot
from tqdm import tqdm
os.makedirs(output_dir, exist_ok=True)
tag = f"{quant}_w{bits}" if quant != "fp16" else "fp16"
out_file = os.path.join(output_dir, f"{benchmark}_{tag}.jsonl")
if os.path.exists(out_file):
print(f" [SKIP] {out_file} already exists")
return out_file
print(f" Loading model: {model_name} ({tag})")
model, tokenizer = load_model(model_name, quant, bits)
print(f" Loading benchmark: {benchmark}")
problems = load_benchmark(benchmark, max_samples=max_samples)
records = []
for prob in tqdm(problems, desc=f"Inference ({tag})"):
result = generate_cot(model, tokenizer, prob["question"], max_tokens)
record = {
"problem_id": prob["id"],
"question": prob["question"],
"gold_answer": prob["answer"],
"model": model_name,
"quantization": tag,
**result,
}
records.append(record)
save_jsonl(records, out_file)
print(f" Saved {len(records)} results -> {out_file}")
# Free GPU memory
del model
import torch
if torch.cuda.is_available():
torch.cuda.empty_cache()
return out_file
def run_segment_phase(inference_file, output_dir, model_name="", quant="fp16"):
"""Segment CoT traces into steps."""
os.makedirs(output_dir, exist_ok=True)
basename = os.path.basename(inference_file)
out_file = os.path.join(output_dir, basename)
if os.path.exists(out_file):
print(f" [SKIP] {out_file} already exists")
return out_file
records = load_jsonl(inference_file)
segmented = []
for rec in records:
seg = segment_cot(
problem_id=rec["problem_id"],
raw_output=rec.get("output", ""),
model=model_name,
quantization=quant,
)
seg_dict = seg.to_dict()
# Carry over metadata
seg_dict["question"] = rec.get("question", "")
seg_dict["gold_answer"] = rec.get("gold_answer", "")
seg_dict["n_tokens"] = rec.get("n_tokens", 0)
segmented.append(seg_dict)
save_jsonl(segmented, out_file)
print(f" Segmented {len(segmented)} traces -> {out_file}")
return out_file
def run_diagnose_phase(ref_file, hyp_file, output_dir, use_llm_judge=False, judge_provider="openai"):
"""Diagnose step-level errors."""
os.makedirs(output_dir, exist_ok=True)
basename = os.path.basename(hyp_file)
out_file = os.path.join(output_dir, basename)
if os.path.exists(out_file):
print(f" [SKIP] {out_file} already exists")
return out_file
ref_traces = load_jsonl(ref_file)
hyp_traces = load_jsonl(hyp_file)
# Reconstruct problems
problems = []
for t in ref_traces:
problems.append({
"problem_id": t["problem_id"],
"question": t.get("question", ""),
"gold_answer": t.get("gold_answer", ""),
})
judge = None
if use_llm_judge:
judge = LLMJudge(provider=judge_provider)
diagnosed = diagnose_batch(
ref_traces=ref_traces,
hyp_traces=hyp_traces,
problems=problems,
judge=judge,
)
save_jsonl(diagnosed, out_file)
print(f" Diagnosed {len(diagnosed)} traces -> {out_file}")
return out_file
def run_metrics_phase(diagnosis_file, output_dir, fp16_acc=None, fp16_ffs=None):
"""Compute StepProbe metrics."""
os.makedirs(output_dir, exist_ok=True)
basename = os.path.splitext(os.path.basename(diagnosis_file))[0]
out_file = os.path.join(output_dir, f"{basename}_metrics.json")
traces = load_jsonl(diagnosis_file)
if not traces:
print(f" [WARN] No traces in {diagnosis_file}")
return None
result = aggregate_metrics(traces, fp16_accuracy=fp16_acc, fp16_avg_ffs=fp16_ffs)
save_json({
"model": result.model,
"quantization": result.quantization,
"n_problems": result.n_problems,
"accuracy": result.accuracy,
"accuracy_delta": result.accuracy_delta,
"avg_ffs": result.avg_ffs,
"median_ffs": result.median_ffs,
"ffs_std": result.ffs_std,
"ecr": result.ecr,
"ssr_curve": result.ssr_curve,
"error_type_dist": result.error_type_dist,
"avg_token_count": result.avg_token_count,
}, out_file)
print(f" Metrics: acc={result.accuracy:.1%}, FFS={result.avg_ffs:.1f}, ECR={result.ecr:.1%}")
return result
def main():
parser = argparse.ArgumentParser(description="End-to-end StepProbe evaluation")
parser.add_argument("--config", default=None, help="YAML config file")
parser.add_argument("--model", default="deepseek-ai/DeepSeek-R1-Distill-Qwen-7B")
parser.add_argument("--benchmark", default="gsm8k", choices=["gsm8k", "math500", "gpqa"])
parser.add_argument("--quant-methods", nargs="*", default=["bnb_nf4"],
help="Quantization methods to test")
parser.add_argument("--bits", nargs="*", type=int, default=[4])
parser.add_argument("--output", default="results/")
parser.add_argument("--max-samples", type=int, default=None, help="Limit samples (for testing)")
parser.add_argument("--quick", action="store_true", help="Quick test with 20 samples")
parser.add_argument("--use-llm-judge", action="store_true")
parser.add_argument("--skip-restore", action="store_true")
parser.add_argument("--seed", type=int, default=42)
args = parser.parse_args()
set_seed(args.seed)
if args.quick:
args.max_samples = 20
base_dir = args.output
os.makedirs(base_dir, exist_ok=True)
# Log
log = {
"start_time": datetime.now().isoformat(),
"model": args.model,
"benchmark": args.benchmark,
"quant_methods": args.quant_methods,
"bits": args.bits,
"max_samples": args.max_samples,
}
print("=" * 70)
print("StepProbe: End-to-End Evaluation")
print("=" * 70)
print(f"Model: {args.model}")
print(f"Benchmark: {args.benchmark}")
print(f"Quant: {args.quant_methods} x {args.bits}-bit")
print(f"Samples: {args.max_samples or 'all'}")
print()
# ========== Phase 1: FP16 Baseline ==========
print("[Phase 1] FP16 Baseline Inference")
fp16_inf = run_inference_phase(
args.model, "fp16", 16, args.benchmark,
os.path.join(base_dir, "inference", "fp16"),
max_samples=args.max_samples,
)
print("\n[Phase 1b] Segmenting FP16 traces")
fp16_seg = run_segment_phase(
fp16_inf, os.path.join(base_dir, "segmented", "fp16"),
model_name=args.model, quant="fp16",
)
# Compute FP16 accuracy
fp16_traces = load_jsonl(fp16_inf)
fp16_correct = 0
for t in fp16_traces:
gold = t.get("gold_answer", "")
if "####" in gold:
gold = extract_gsm8k_answer(gold)
pred = extract_number(t.get("output", ""))
if pred and check_answer(pred, gold):
fp16_correct += 1
fp16_acc = fp16_correct / len(fp16_traces) if fp16_traces else 0
print(f" FP16 accuracy: {fp16_acc:.1%} ({fp16_correct}/{len(fp16_traces)})")
# ========== Phase 2: Quantized Inference ==========
all_results = []
for quant_method in args.quant_methods:
for bits in args.bits:
tag = f"{quant_method}_w{bits}"
print(f"\n[Phase 2] Quantized Inference: {tag}")
quant_inf = run_inference_phase(
args.model, quant_method, bits, args.benchmark,
os.path.join(base_dir, "inference", tag),
max_samples=args.max_samples,
)
# ========== Phase 3: Segment ==========
print(f"[Phase 3] Segmenting {tag} traces")
quant_seg = run_segment_phase(
quant_inf, os.path.join(base_dir, "segmented", tag),
model_name=args.model, quant=tag,
)
# ========== Phase 4: Diagnose ==========
print(f"[Phase 4] Diagnosing {tag}")
diag_file = run_diagnose_phase(
fp16_seg, quant_seg,
os.path.join(base_dir, "diagnosis", tag),
use_llm_judge=args.use_llm_judge,
)
# ========== Phase 5: Metrics ==========
print(f"[Phase 5] Computing metrics for {tag}")
result = run_metrics_phase(
diag_file,
os.path.join(base_dir, "metrics"),
fp16_acc=fp16_acc,
)
if result:
all_results.append(result)
# ========== Summary ==========
print("\n" + "=" * 70)
print("RESULTS SUMMARY")
print("=" * 70)
if all_results:
print(format_results_table(all_results))
log["end_time"] = datetime.now().isoformat()
log["fp16_accuracy"] = fp16_acc
log["results"] = [
{"quant": r.quantization, "accuracy": r.accuracy, "avg_ffs": r.avg_ffs, "ecr": r.ecr}
for r in all_results
]
save_json(log, os.path.join(base_dir, "eval_log.json"))
print(f"\nAll results saved to {base_dir}")
print("Done!")
if __name__ == "__main__":
main()
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