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Nominatim
Nominatim-master/test/python/api/test_api_lookup.py
# SPDX-License-Identifier: GPL-3.0-or-later # # This file is part of Nominatim. (https://nominatim.org) # # Copyright (C) 2023 by the Nominatim developer community. # For a full list of authors see the git log. """ Tests for lookup API call. """ import pytest import nominatim.api as napi def test_lookup_empty_list(ap...
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py
Nominatim
Nominatim-master/test/python/api/conftest.py
# SPDX-License-Identifier: GPL-2.0-only # # This file is part of Nominatim. (https://nominatim.org) # # Copyright (C) 2023 by the Nominatim developer community. # For a full list of authors see the git log. """ Helper fixtures for API call tests. """ from pathlib import Path import pytest import time import datetime as...
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py
Nominatim
Nominatim-master/test/python/api/test_result_formatting_v1.py
# SPDX-License-Identifier: GPL-2.0-only # # This file is part of Nominatim. (https://nominatim.org) # # Copyright (C) 2023 by the Nominatim developer community. # For a full list of authors see the git log. """ Tests for formatting results for the V1 API. These test only ensure that the Python code is correct. For fun...
13,140
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py
Nominatim
Nominatim-master/test/python/api/test_results.py
# SPDX-License-Identifier: GPL-3.0-or-later # # This file is part of Nominatim. (https://nominatim.org) # # Copyright (C) 2023 by the Nominatim developer community. # For a full list of authors see the git log. """ Tests for result datatype helper functions. """ import struct from binascii import hexlify import pytest...
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py
Nominatim
Nominatim-master/test/python/api/test_server_glue_v1.py
# SPDX-License-Identifier: GPL-3.0-or-later # # This file is part of Nominatim. (https://nominatim.org) # # Copyright (C) 2023 by the Nominatim developer community. # For a full list of authors see the git log. """ Tests for the Python web frameworks adaptor, v1 API. """ from collections import namedtuple import json i...
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Nominatim
Nominatim-master/test/python/api/test_result_formatting_v1_reverse.py
# SPDX-License-Identifier: GPL-2.0-only # # This file is part of Nominatim. (https://nominatim.org) # # Copyright (C) 2023 by the Nominatim developer community. # For a full list of authors see the git log. """ Tests for formatting reverse results for the V1 API. These test only ensure that the Python code is correct....
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39.095679
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py
Nominatim
Nominatim-master/test/python/api/test_api_status.py
# SPDX-License-Identifier: GPL-2.0-only # # This file is part of Nominatim. (https://nominatim.org) # # Copyright (C) 2023 by the Nominatim developer community. # For a full list of authors see the git log. """ Tests for the status API call. """ from pathlib import Path import datetime as dt import pytest from nominat...
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Nominatim
Nominatim-master/test/python/api/test_api_types.py
# SPDX-License-Identifier: GPL-3.0-or-later # # This file is part of Nominatim. (https://nominatim.org) # # Copyright (C) 2023 by the Nominatim developer community. # For a full list of authors see the git log. """ Tests for loading of parameter dataclasses. """ import pytest from nominatim.errors import UsageError im...
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Nominatim
Nominatim-master/test/python/api/test_api_reverse.py
# SPDX-License-Identifier: GPL-3.0-or-later # # This file is part of Nominatim. (https://nominatim.org) # # Copyright (C) 2023 by the Nominatim developer community. # For a full list of authors see the git log. """ Tests for reverse API call. These tests make sure that all Python code is correct and executable. Functi...
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Nominatim
Nominatim-master/test/python/api/test_localization.py
# SPDX-License-Identifier: GPL-3.0-or-later # # This file is part of Nominatim. (https://nominatim.org) # # Copyright (C) 2023 by the Nominatim developer community. # For a full list of authors see the git log. """ Test functions for adapting results to the user's locale. """ import pytest from nominatim.api import Lo...
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Nominatim
Nominatim-master/test/python/api/test_api_search.py
# SPDX-License-Identifier: GPL-3.0-or-later # # This file is part of Nominatim. (https://nominatim.org) # # Copyright (C) 2023 by the Nominatim developer community. # For a full list of authors see the git log. """ Tests for search API calls. These tests make sure that all Python code is correct and executable. Functi...
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Nominatim
Nominatim-master/test/python/api/test_api_connection.py
# SPDX-License-Identifier: GPL-3.0-or-later # # This file is part of Nominatim. (https://nominatim.org) # # Copyright (C) 2023 by the Nominatim developer community. # For a full list of authors see the git log. """ Tests for enhanced connection class for API functions. """ from pathlib import Path import pytest import ...
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Nominatim
Nominatim-master/test/python/api/test_api_details.py
# SPDX-License-Identifier: GPL-3.0-or-later # # This file is part of Nominatim. (https://nominatim.org) # # Copyright (C) 2023 by the Nominatim developer community. # For a full list of authors see the git log. """ Tests for details API call. """ import datetime as dt import pytest import nominatim.api as napi @pyte...
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Nominatim
Nominatim-master/test/python/api/test_helpers_v1.py
# SPDX-License-Identifier: GPL-3.0-or-later # # This file is part of Nominatim. (https://nominatim.org) # # Copyright (C) 2023 by the Nominatim developer community. # For a full list of authors see the git log. """ Tests for the helper functions for v1 API. """ import pytest import nominatim.api.v1.helpers as helper ...
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Nominatim
Nominatim-master/test/python/api/search/test_icu_query_analyzer.py
# SPDX-License-Identifier: GPL-3.0-or-later # # This file is part of Nominatim. (https://nominatim.org) # # Copyright (C) 2023 by the Nominatim developer community. # For a full list of authors see the git log. """ Tests for query analyzer for ICU tokenizer. """ from pathlib import Path import pytest import pytest_asy...
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Nominatim
Nominatim-master/test/python/api/search/test_api_search_query.py
# SPDX-License-Identifier: GPL-3.0-or-later # # This file is part of Nominatim. (https://nominatim.org) # # Copyright (C) 2023 by the Nominatim developer community. # For a full list of authors see the git log. """ Tests for tokenized query data structures. """ import pytest from nominatim.api.search import query cla...
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Nominatim
Nominatim-master/test/python/api/search/test_token_assignment.py
# SPDX-License-Identifier: GPL-3.0-or-later # # This file is part of Nominatim. (https://nominatim.org) # # Copyright (C) 2023 by the Nominatim developer community. # For a full list of authors see the git log. """ Test for creation of token assignments from tokenized queries. """ import pytest from nominatim.api.sear...
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Nominatim
Nominatim-master/test/python/api/search/test_search_poi.py
# SPDX-License-Identifier: GPL-3.0-or-later # # This file is part of Nominatim. (https://nominatim.org) # # Copyright (C) 2023 by the Nominatim developer community. # For a full list of authors see the git log. """ Tests for running the POI searcher. """ import pytest import nominatim.api as napi from nominatim.api.ty...
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Nominatim
Nominatim-master/test/python/api/search/test_query_analyzer_factory.py
# SPDX-License-Identifier: GPL-3.0-or-later # # This file is part of Nominatim. (https://nominatim.org) # # Copyright (C) 2023 by the Nominatim developer community. # For a full list of authors see the git log. """ Tests for query analyzer creation. """ from pathlib import Path import pytest from nominatim.api import...
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Nominatim
Nominatim-master/test/python/api/search/test_legacy_query_analyzer.py
# SPDX-License-Identifier: GPL-3.0-or-later # # This file is part of Nominatim. (https://nominatim.org) # # Copyright (C) 2023 by the Nominatim developer community. # For a full list of authors see the git log. """ Tests for query analyzer for legacy tokenizer. """ from pathlib import Path import pytest import pytest_...
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Nominatim
Nominatim-master/test/python/api/search/test_search_near.py
# SPDX-License-Identifier: GPL-3.0-or-later # # This file is part of Nominatim. (https://nominatim.org) # # Copyright (C) 2023 by the Nominatim developer community. # For a full list of authors see the git log. """ Tests for running the near searcher. """ import pytest import nominatim.api as napi from nominatim.api.t...
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Nominatim
Nominatim-master/test/python/api/search/test_search_places.py
# SPDX-License-Identifier: GPL-3.0-or-later # # This file is part of Nominatim. (https://nominatim.org) # # Copyright (C) 2023 by the Nominatim developer community. # For a full list of authors see the git log. """ Tests for running the generic place searcher. """ import pytest import nominatim.api as napi from nomina...
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Nominatim
Nominatim-master/test/python/api/search/test_db_search_builder.py
# SPDX-License-Identifier: GPL-3.0-or-later # # This file is part of Nominatim. (https://nominatim.org) # # Copyright (C) 2023 by the Nominatim developer community. # For a full list of authors see the git log. """ Tests for creating abstract searches from token assignments. """ import pytest from nominatim.api.search...
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Nominatim
Nominatim-master/test/python/api/search/test_search_postcode.py
# SPDX-License-Identifier: GPL-3.0-or-later # # This file is part of Nominatim. (https://nominatim.org) # # Copyright (C) 2023 by the Nominatim developer community. # For a full list of authors see the git log. """ Tests for running the postcode searcher. """ import pytest import nominatim.api as napi from nominatim.a...
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Nominatim
Nominatim-master/test/python/api/search/test_search_country.py
# SPDX-License-Identifier: GPL-3.0-or-later # # This file is part of Nominatim. (https://nominatim.org) # # Copyright (C) 2023 by the Nominatim developer community. # For a full list of authors see the git log. """ Tests for running the country searcher. """ import pytest import nominatim.api as napi from nominatim.ap...
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Nominatim
Nominatim-master/test/python/tokenizer/test_icu.py
# SPDX-License-Identifier: GPL-2.0-only # # This file is part of Nominatim. (https://nominatim.org) # # Copyright (C) 2022 by the Nominatim developer community. # For a full list of authors see the git log. """ Tests for ICU tokenizer. """ import shutil import yaml import itertools import pytest from nominatim.tokeni...
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Nominatim
Nominatim-master/test/python/tokenizer/test_place_sanitizer.py
# SPDX-License-Identifier: GPL-2.0-only # # This file is part of Nominatim. (https://nominatim.org) # # Copyright (C) 2022 by the Nominatim developer community. # For a full list of authors see the git log. """ Tests for execution of the sanitztion step. """ import pytest from nominatim.errors import UsageError import...
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Nominatim
Nominatim-master/test/python/tokenizer/test_factory.py
# SPDX-License-Identifier: GPL-2.0-only # # This file is part of Nominatim. (https://nominatim.org) # # Copyright (C) 2022 by the Nominatim developer community. # For a full list of authors see the git log. """ Tests for creating new tokenizers. """ import pytest from nominatim.db import properties from nominatim.toke...
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Nominatim
Nominatim-master/test/python/tokenizer/test_legacy.py
# SPDX-License-Identifier: GPL-2.0-only # # This file is part of Nominatim. (https://nominatim.org) # # Copyright (C) 2022 by the Nominatim developer community. # For a full list of authors see the git log. """ Test for legacy tokenizer. """ import shutil import re import pytest from nominatim.data.place_info import ...
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Nominatim
Nominatim-master/test/python/tokenizer/test_icu_rule_loader.py
# SPDX-License-Identifier: GPL-2.0-only # # This file is part of Nominatim. (https://nominatim.org) # # Copyright (C) 2022 by the Nominatim developer community. # For a full list of authors see the git log. """ Tests for converting a config file to ICU rules. """ from textwrap import dedent import pytest import yaml ...
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Nominatim
Nominatim-master/test/python/tokenizer/sanitizers/test_delete_tags.py
# SPDX-License-Identifier: GPL-2.0-only # # This file is part of Nominatim. (https://nominatim.org) # # Copyright (C) 2023 by the Nominatim developer community. # For a full list of authors see the git log. """ Tests for the sanitizer that normalizes housenumbers. """ import pytest from nominatim.data.place_info impo...
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Nominatim
Nominatim-master/test/python/tokenizer/sanitizers/test_split_name_list.py
# SPDX-License-Identifier: GPL-2.0-only # # This file is part of Nominatim. (https://nominatim.org) # # Copyright (C) 2022 by the Nominatim developer community. # For a full list of authors see the git log. """ Tests for the sanitizer that splits multivalue lists. """ import pytest from nominatim.tokenizer.place_sanit...
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Nominatim
Nominatim-master/test/python/tokenizer/sanitizers/test_clean_tiger_tags.py
# SPDX-License-Identifier: GPL-2.0-only # # This file is part of Nominatim. (https://nominatim.org) # # Copyright (C) 2022 by the Nominatim developer community. # For a full list of authors see the git log. """ Tests for sanitizer that clean up TIGER tags. """ import pytest from nominatim.tokenizer.place_sanitizer imp...
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Nominatim
Nominatim-master/test/python/tokenizer/sanitizers/test_tag_analyzer_by_language.py
# SPDX-License-Identifier: GPL-2.0-only # # This file is part of Nominatim. (https://nominatim.org) # # Copyright (C) 2022 by the Nominatim developer community. # For a full list of authors see the git log. """ Tests for the sanitizer that enables language-dependent analyzers. """ import pytest from nominatim.data.pla...
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Nominatim
Nominatim-master/test/python/tokenizer/sanitizers/test_strip_brace_terms.py
# SPDX-License-Identifier: GPL-2.0-only # # This file is part of Nominatim. (https://nominatim.org) # # Copyright (C) 2022 by the Nominatim developer community. # For a full list of authors see the git log. """ Tests for the sanitizer that handles braced suffixes. """ import pytest from nominatim.tokenizer.place_sanit...
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Nominatim
Nominatim-master/test/python/tokenizer/sanitizers/test_sanitizer_config.py
# SPDX-License-Identifier: GPL-2.0-only # # This file is part of Nominatim. (https://nominatim.org) # # Copyright (C) 2022 by the Nominatim developer community. # For a full list of authors see the git log. """ Tests for sanitizer configuration helper functions. """ import pytest from nominatim.errors import UsageErro...
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py
Nominatim
Nominatim-master/test/python/tokenizer/sanitizers/test_clean_postcodes.py
# SPDX-License-Identifier: GPL-2.0-only # # This file is part of Nominatim. (https://nominatim.org) # # Copyright (C) 2022 by the Nominatim developer community. # For a full list of authors see the git log. """ Tests for the sanitizer that normalizes postcodes. """ import pytest from nominatim.tokenizer.place_sanitize...
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py
Nominatim
Nominatim-master/test/python/tokenizer/sanitizers/test_clean_housenumbers.py
# SPDX-License-Identifier: GPL-2.0-only # # This file is part of Nominatim. (https://nominatim.org) # # Copyright (C) 2022 by the Nominatim developer community. # For a full list of authors see the git log. """ Tests for the sanitizer that normalizes housenumbers. """ import pytest from nominatim.tokenizer.place_sanit...
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py
Nominatim
Nominatim-master/test/python/tokenizer/token_analysis/test_analysis_postcodes.py
# SPDX-License-Identifier: GPL-2.0-only # # This file is part of Nominatim. (https://nominatim.org) # # Copyright (C) 2022 by the Nominatim developer community. # For a full list of authors see the git log. """ Tests for special postcode analysis and variant generation. """ import pytest from icu import Transliterator...
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Nominatim
Nominatim-master/test/python/tokenizer/token_analysis/test_generic_mutation.py
# SPDX-License-Identifier: GPL-2.0-only # # This file is part of Nominatim. (https://nominatim.org) # # Copyright (C) 2022 by the Nominatim developer community. # For a full list of authors see the git log. """ Tests for generic token analysis, mutation part. """ import pytest from icu import Transliterator import no...
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Nominatim
Nominatim-master/test/python/tokenizer/token_analysis/test_generic.py
# SPDX-License-Identifier: GPL-2.0-only # # This file is part of Nominatim. (https://nominatim.org) # # Copyright (C) 2022 by the Nominatim developer community. # For a full list of authors see the git log. """ Tests for import name normalisation and variant generation. """ import pytest from icu import Transliterator...
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Nominatim
Nominatim-master/test/python/indexer/test_indexing.py
# SPDX-License-Identifier: GPL-2.0-only # # This file is part of Nominatim. (https://nominatim.org) # # Copyright (C) 2022 by the Nominatim developer community. # For a full list of authors see the git log. """ Tests for running the indexing. """ import itertools import pytest from nominatim.indexer import indexer fro...
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Nominatim
Nominatim-master/test/python/utils/test_json_writer.py
# SPDX-License-Identifier: GPL-3.0-or-later # # This file is part of Nominatim. (https://nominatim.org) # # Copyright (C) 2023 by the Nominatim developer community. # For a full list of authors see the git log. """ Tests for the streaming JSON writer. """ import json import pytest from nominatim.utils.json_writer imp...
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Nominatim
Nominatim-master/test/python/utils/test_centroid.py
# SPDX-License-Identifier: GPL-2.0-only # # This file is part of Nominatim. (https://nominatim.org) # # Copyright (C) 2022 by the Nominatim developer community. # For a full list of authors see the git log. """ Tests for centroid computation. """ import pytest from nominatim.utils.centroid import PointsCentroid def t...
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Nominatim
Nominatim-master/test/python/data/test_country_info.py
# SPDX-License-Identifier: GPL-2.0-only # # This file is part of Nominatim. (https://nominatim.org) # # Copyright (C) 2022 by the Nominatim developer community. # For a full list of authors see the git log. """ Tests for function that handle country properties. """ from textwrap import dedent import pytest from nomina...
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Nominatim
Nominatim-master/test/bdd/environment.py
# SPDX-License-Identifier: GPL-2.0-only # # This file is part of Nominatim. (https://nominatim.org) # # Copyright (C) 2022 by the Nominatim developer community. # For a full list of authors see the git log. from pathlib import Path from behave import * from steps.geometry_factory import GeometryFactory from steps.nom...
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Nominatim
Nominatim-master/test/bdd/steps/nominatim_environment.py
# SPDX-License-Identifier: GPL-2.0-only # # This file is part of Nominatim. (https://nominatim.org) # # Copyright (C) 2022 by the Nominatim developer community. # For a full list of authors see the git log. from pathlib import Path import importlib import sys import tempfile import psycopg2 import psycopg2.extras sys...
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Nominatim
Nominatim-master/test/bdd/steps/steps_api_queries.py
# SPDX-License-Identifier: GPL-2.0-only # # This file is part of Nominatim. (https://nominatim.org) # # Copyright (C) 2022 by the Nominatim developer community. # For a full list of authors see the git log. """ Steps that run queries against the API. Queries may either be run directly via PHP using the query scrip...
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Nominatim
Nominatim-master/test/bdd/steps/check_functions.py
# SPDX-License-Identifier: GPL-2.0-only # # This file is part of Nominatim. (https://nominatim.org) # # Copyright (C) 2023 by the Nominatim developer community. # For a full list of authors see the git log. """ Collection of assertion functions used for the steps. """ import json import math import re class Almost: ...
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Nominatim
Nominatim-master/test/bdd/steps/place_inserter.py
# SPDX-License-Identifier: GPL-2.0-only # # This file is part of Nominatim. (https://nominatim.org) # # Copyright (C) 2022 by the Nominatim developer community. # For a full list of authors see the git log. """ Helper classes for filling the place table. """ import random import string class PlaceColumn: """ Helpe...
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Nominatim
Nominatim-master/test/bdd/steps/utils.py
# SPDX-License-Identifier: GPL-2.0-only # # This file is part of Nominatim. (https://nominatim.org) # # Copyright (C) 2022 by the Nominatim developer community. # For a full list of authors see the git log. """ Various smaller helps for step execution. """ import logging import subprocess LOG = logging.getLogger(__nam...
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Nominatim
Nominatim-master/test/bdd/steps/geometry_factory.py
# SPDX-License-Identifier: GPL-2.0-only # # This file is part of Nominatim. (https://nominatim.org) # # Copyright (C) 2022 by the Nominatim developer community. # For a full list of authors see the git log. from pathlib import Path import os from steps.geometry_alias import ALIASES class GeometryFactory: """ Prov...
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Nominatim
Nominatim-master/test/bdd/steps/steps_db_ops.py
# SPDX-License-Identifier: GPL-2.0-only # # This file is part of Nominatim. (https://nominatim.org) # # Copyright (C) 2022 by the Nominatim developer community. # For a full list of authors see the git log. import logging from itertools import chain import psycopg2.extras from place_inserter import PlaceColumn from t...
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py
Nominatim
Nominatim-master/test/bdd/steps/table_compare.py
# SPDX-License-Identifier: GPL-2.0-only # # This file is part of Nominatim. (https://nominatim.org) # # Copyright (C) 2022 by the Nominatim developer community. # For a full list of authors see the git log. """ Functions to facilitate accessing and comparing the content of DB tables. """ import re import json from ste...
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py
Nominatim
Nominatim-master/test/bdd/steps/http_responses.py
# SPDX-License-Identifier: GPL-2.0-only # # This file is part of Nominatim. (https://nominatim.org) # # Copyright (C) 2023 by the Nominatim developer community. # For a full list of authors see the git log. """ Classes wrapping HTTP responses from the Nominatim API. """ import re import json import xml.etree.ElementTre...
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Nominatim
Nominatim-master/test/bdd/steps/geometry_alias.py
# SPDX-License-Identifier: GPL-2.0-only # # This file is part of Nominatim. (https://nominatim.org) # # Copyright (C) 2022 by the Nominatim developer community. # For a full list of authors see the git log. """ Collection of aliases for various world coordinates. """ ALIASES = { # Country aliases 'AD': (1.58972, 42.54...
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Nominatim
Nominatim-master/test/bdd/steps/steps_osm_data.py
# SPDX-License-Identifier: GPL-2.0-only # # This file is part of Nominatim. (https://nominatim.org) # # Copyright (C) 2022 by the Nominatim developer community. # For a full list of authors see the git log. import tempfile import random import os from pathlib import Path from nominatim.tools.exec_utils import run_osm2...
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py
lila
lila-main/setup.py
import setuptools with open("README.md", "r", encoding="utf-8") as fh: long_description = fh.read() setuptools.setup( name="lila", version="0.0.0", author="Mahdi Qezlou, Simeon Bird, Adam Lidz, Guochao Sun, Andrew B. Newman", author_email="mahdi.qezlou@email.ucr.edu", description="Line Intens...
869
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py
lila
lila-main/src/lila/inference.py
import numpy as np from nbodykit.lab import cosmology class Infer(): """ some helper routines for inference from a simulation. Used in notebooks/inference.ipynb """ def __init__(self, st, iter_sampling=100_000, chains=6, linear=True, rsd=False, dm_file = None, kmin=None, kmax =None, k_non=None, la...
30,701
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py
lila
lila-main/src/lila/mock_lya.py
import os import h5py import numpy as np from nbodykit.lab import ArrayMesh from astropy.cosmology import Planck15 from lytomo_watershed import spectra_mocking as sm from lytomo_watershed import z_bin from scipy.ndimage import gaussian_filter as gf from nbodykit import setup_logging import logging import logging.config...
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py
lila
lila-main/src/lila/stats.py
import numpy as np import h5py import astropy.constants as const from astropy.cosmology import Planck15 as cosmo from nbodykit.lab import FFTPower from nbodykit.lab import ArrayMesh from nbodykit import utils from lytomo_watershed import spectra_mocking as sm import lim_lytomo from . import git_handler from nbodykit im...
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py
lila
lila-main/src/lila/exclaim.py
import os import glob import h5py import numpy as np import dask.array as da from astropy import constants, units from astropy.cosmology import Planck15 as cosmo from nbodykit import setup_logging import logging import logging.config from nbodykit.lab import ArrayMesh from nbodykit.lab import HDFCatalog from nbodykit i...
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py
lila
lila-main/src/lila/comap.py
import os import glob import h5py import numpy as np import dask.array as da from astropy import constants as const from astropy.cosmology import Planck15 as cosmo from nbodykit import setup_logging import logging import logging.config from nbodykit.lab import ArrayMesh from . import lim class MockComap(lim.MockLim):...
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py
lila
lila-main/src/lila/plot.py
import numpy as np import h5py import matplotlib from matplotlib import pyplot as plt import corner import matplotlib.lines as mlines from astropy.cosmology import Planck15 as cosmo class Maps(): """Methods to plot our results""" def __init__(self): a=1 def mass_luminosity(self, COMAP21_params,ls=...
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py
lila
lila-main/src/lila/__init__.py
0
0
0
py
lila
lila-main/src/lila/git_handler.py
import os import subprocess def get_head_hash(pack): """Get the long hash of the commit on HEAD Paramters: Pack : The package you are using Returns: The hash as a binary """ repo_path = os.path.dirname(pack.__file__) proc = subprocess.Popen('git -C '+repo_path+' rev-parse HEAD', stdo...
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py
lila
lila-main/src/lila/lim.py
import os import glob import h5py import numpy as np import dask.array as da from astropy import constants as const from astropy.cosmology import Planck15 as cosmo from nbodykit import setup_logging import logging import logging.config from nbodykit.lab import ArrayMesh, HDFCatalog, CurrentMPIComm class MockLim(): ...
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py
lila
lila-main/src/lila/mock_galaxy.py
import os import glob import copy from matplotlib.pyplot import axis from pandas import to_timedelta import h5py import numpy as np import dask.array as da from astropy import constants as const from astropy.cosmology import Planck15 as cosmo from nbodykit import setup_logging import logging import logging.config from ...
13,425
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py
lila
lila-main/src/lila/tests/test_lim.py
import numpy as np import h5py import importlib from os import system from lim_lytomo import lim from nbodykit.lab import * import dask.array as da def make_fake_sim(boxsize): a = np.linspace(0,1,5)*boxsize*1000 x, y, z = np.meshgrid(a,a,a) parts = np.zeros((a.size**3,3)) parts[:,0] = x.ravel() ...
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py
lila
lila-main/helper_scripts/get_gal.py
# Helper functions to get stats for one mock import argparse from os.path import join import numpy as np from lim_lytomo import stats from lim_lytomo import comap, mock_galaxy from os.path import join ## Specifics of the simulation boxsize= [250,250,250] seed = 13 snap='z2.5' basepath='/rhome/mqezl001/bigdata/ASTRID/s...
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py
lila
lila-main/helper_scripts/get_latis_source_pk.py
import numpy as np import h5py from nbodykit.lab import HDFCatalog from nbodykit.lab import FFTPower cat = HDFCatalog('./LATIS_source_catalog.hdf5', dataset='source') print(cat['Coordinates'].shape) boxsize = [94,54,484] Nmesh = [19, 11, 95] mesh = cat.to_mesh(Nmesh=Nmesh, position='Coordinates', BoxS...
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py
lila
lila-main/helper_scripts/get_lya.py
# Helper functions to get stats for one mock import argparse from os.path import join import numpy as np from lim_lytomo import stats from lim_lytomo import comap, mock_lya from os.path import join ## Specifics of the simulation boxsize= [250]*3 seed = 13 snap='z2.5' #snap = None basepath='/rhome/mqezl001/bigdata/ASTR...
2,896
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py
MotionRGBD-PAMI
MotionRGBD-PAMI-main/fusion.py
''' Copyright (C) 2010-2021 Alibaba Group Holding Limited. ''' import os, random, math import time import glob import numpy as np import shutil import torch import logging import argparse import traceback import torch.nn as nn import torch.utils import torchvision.datasets as dset import torch.backends.cudnn as cudnn...
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py
MotionRGBD-PAMI
MotionRGBD-PAMI-main/train.py
''' Copyright (C) 2010-2021 Alibaba Group Holding Limited. ''' import time import glob import numpy as np import shutil import cv2 import os, random, math import sys # sys.path.append(os.path.join('..', os.path.abspath(os.path.join(os.getcwd()))) ) from pathlib import Path from timm.scheduler import create_scheduler f...
33,323
44.154472
182
py
MotionRGBD-PAMI
MotionRGBD-PAMI-main/train_fusion.py
''' Copyright (C) 2010-2021 Alibaba Group Holding Limited. ''' import time import glob import numpy as np import shutil import cv2 import os, random, math import sys from pathlib import Path from timm.scheduler import create_scheduler from timm.utils import ApexScaler, NativeScaler from timm.optim import create_optimi...
30,632
45.064662
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py
MotionRGBD-PAMI
MotionRGBD-PAMI-main/tools/fusion.py
''' Copyright (C) 2010-2021 Alibaba Group Holding Limited. ''' import os, random, math import time import glob import numpy as np import shutil import torch import logging import argparse import traceback import torch.nn as nn import torch.utils import torchvision.datasets as dset import torch.backends.cudnn as cudnn...
16,564
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py
MotionRGBD-PAMI
MotionRGBD-PAMI-main/config/config.py
''' Copyright (C) 2010-2021 Alibaba Group Holding Limited. ''' import yaml # from easydict import EasyDict as edict def Config(args): print() print('='*80) with open(args.config) as f: config = yaml.load(f, Loader=yaml.FullLoader) for dic in config: for k, v in config[dic].items(): ...
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py
MotionRGBD-PAMI
MotionRGBD-PAMI-main/config/__init__.py
''' Copyright (C) 2010-2021 Alibaba Group Holding Limited. ''' from .config import Config
90
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py
MotionRGBD-PAMI
MotionRGBD-PAMI-main/demo/cluster.py
''' Copyright (C) 2010-2021 Alibaba Group Holding Limited. ''' import torch import torch.nn.functional as F from scipy.spatial.distance import pdist import pandas as pd from sklearn import manifold import numpy as np import sys import sklearn from sklearn import metrics import matplotlib matplotlib.use('agg') from mat...
2,693
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121
py
MotionRGBD-PAMI
MotionRGBD-PAMI-main/demo/plot.py
''' Copyright (C) 2010-2021 Alibaba Group Holding Limited. ''' import matplotlib # matplotlib.use('Agg') import matplotlib.pyplot as plt import matplotlib.font_manager as fm from mpl_toolkits import axisartist import seaborn as sns import numpy as np import re import sys import os, argparse, random import torch def p...
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py
MotionRGBD-PAMI
MotionRGBD-PAMI-main/utils/evaluate_metric.py
''' Copyright (C) 2010-2021 Alibaba Group Holding Limited. ''' # ------------------- # import modules # ------------------- import random, os import numpy as np import cv2 import heapq import shutil from textwrap import wrap import matplotlib import matplotlib.pyplot as plt import matplotlib.image as mpimage from sk...
5,573
39.100719
150
py
MotionRGBD-PAMI
MotionRGBD-PAMI-main/utils/print_function.py
''' Copyright (C) 2010-2021 Alibaba Group Holding Limited. ''' import logging def print_func(info): ''' :param info: {name: value} :return: ''' txts = [] for name, value in info.items(): txts.append('{}: {}'.format(name, value)) logging.info('\t'.join(txts))
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18.8
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py
MotionRGBD-PAMI
MotionRGBD-PAMI-main/utils/utils.py
''' This file is modified from: https://github.com/yuhuixu1993/PC-DARTS/blob/master/utils.py ''' import os import numpy as np import torch import torch.distributed as dist import shutil import torchvision.transforms as transforms from torch.autograd import Variable from collections import OrderedDict import random fro...
21,656
41.216374
338
py
MotionRGBD-PAMI
MotionRGBD-PAMI-main/utils/mixup.py
""" This file is modified from: https://github.com/rwightman/pytorch-image-models/blob/main/timm/data/mixup.py Mixup and Cutmix Papers: mixup: Beyond Empirical Risk Minimization (https://arxiv.org/abs/1710.09412) CutMix: Regularization Strategy to Train Strong Classifiers with Localizable Features (https://arxiv.or...
17,254
44.890957
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py
MotionRGBD-PAMI
MotionRGBD-PAMI-main/utils/visualizer.py
''' This file is modified from: https://github.com/zhoubenjia/RAAR3DNet/blob/master/Network_Train/utils/visualizer.py ''' #coding: utf8 import numpy as np import time class Visualizer(): def __init__(self, env='default', **kwargs): import visdom self.vis = visdom.Visdom(env=env, use_incoming_so...
3,190
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py
MotionRGBD-PAMI
MotionRGBD-PAMI-main/utils/shufflemix.py
import numpy as np import torch import random def Vmixup(x, lam): x_flipped = x.flip(0).mul_(1. - lam) x.mul_(lam).add_(x_flipped) def ShuffleMix(x, lam): x_flipped = x.flip(0) replace_idx = random.sample(range(0, x.size(2)), round((1. - lam)*x.size(2))) x[:, :, replace_idx, :, :] = x_flipped[:, :...
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35.626761
127
py
MotionRGBD-PAMI
MotionRGBD-PAMI-main/utils/__init__.py
''' Copyright (C) 2010-2021 Alibaba Group Holding Limited. ''' from .print_function import print_func from .build import * from .evaluate_metric import EvaluateMetric from .utils import * from .mixup import Mixup
214
20.5
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py
MotionRGBD-PAMI
MotionRGBD-PAMI-main/utils/build.py
''' Copyright (C) 2010-2021 Alibaba Group Holding Limited. ''' import torch import math import torch.nn.functional as F # from .utils import cosine_scheduler import matplotlib.pyplot as plt import numpy as np class LabelSmoothingCrossEntropy(torch.nn.Module): def __init__(self, smoothing: float = 0.1, ...
5,901
37.575163
118
py
MotionRGBD-PAMI
MotionRGBD-PAMI-main/data/data_preprose_for_NTU.py
''' Copyright (C) 2010-2021 Alibaba Group Holding Limited. NTU-RGBD Data preprocessing function ''' import cv2 from PIL import Image import numpy as np import os, glob, re import argparse import csv import random from tqdm import tqdm from multiprocessing import Process import shutil from multiprocessing import Pool...
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34.597561
117
py
MotionRGBD-PAMI
MotionRGBD-PAMI-main/data/video2Images.py
import cv2 from PIL import Image import numpy as np import os, glob, re, sys import argparse import csv import random from tqdm import tqdm from multiprocessing import Process import shutil from multiprocessing import Pool, cpu_count def video2image(v_p): img_path = os.path.join(args.img_path, v_p.split('/')[-1]...
5,096
33.439189
145
py
MotionRGBD-PAMI
MotionRGBD-PAMI-main/lib/__init__.py
''' Copyright (C) 2010-2021 Alibaba Group Holding Limited. ''' from .datasets import * from .model import *
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20.6
54
py
MotionRGBD-PAMI
MotionRGBD-PAMI-main/lib/datasets/base.py
''' This file is modified from: https://github.com/zhoubenjia/RAAR3DNet/blob/master/Network_Train/lib/datasets/base.py ''' import torch from torch.utils.data import Dataset, DataLoader from torchvision import transforms, set_image_backend import torch.nn.functional as F from PIL import Image from PIL import ImageFilt...
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41.412371
210
py
MotionRGBD-PAMI
MotionRGBD-PAMI-main/lib/datasets/Jester.py
''' Copyright (C) 2010-2021 Alibaba Group Holding Limited. ''' import torch from .base import Datasets from torchvision import transforms, set_image_backend import random, os from PIL import Image import numpy as np import logging # import accimage # set_image_backend('accimage') np.random.seed(123) class JesterData(...
2,115
37.472727
186
py
MotionRGBD-PAMI
MotionRGBD-PAMI-main/lib/datasets/IsoGD.py
''' Copyright (C) 2010-2021 Alibaba Group Holding Limited. ''' import torch from .base import Datasets from torchvision import transforms, set_image_backend import random, os from PIL import Image import numpy as np # import accimage # set_image_backend('accimage') class IsoGDData(Datasets): def __init__(self, ar...
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155
py
MotionRGBD-PAMI
MotionRGBD-PAMI-main/lib/datasets/augmentation.py
''' This file is modified from: https://github.com/okankop/vidaug/blob/master/vidaug/augmentors/affine.py ''' import PIL from PIL import ImageFilter, ImageOps, Image import os, glob import math, random import numpy as np import logging import cv2 from scipy.ndimage.filters import gaussian_filter import numbers class S...
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py
MotionRGBD-PAMI
MotionRGBD-PAMI-main/lib/datasets/THU_READ.py
''' Copyright (C) 2010-2021 Alibaba Group Holding Limited. ''' import torch from .base import Datasets from torchvision import transforms, set_image_backend import random, os from PIL import Image import numpy as np import logging import cv2 from einops import rearrange, repeat from torchvision.utils import save_imag...
1,708
33.18
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py
MotionRGBD-PAMI
MotionRGBD-PAMI-main/lib/datasets/transforms_factory.py
""" Transforms Factory Factory methods for building image transforms for use with TIMM (PyTorch Image Models) Hacked together by / Copyright 2019, Ross Wightman """ import math import torch from torchvision import transforms from timm.data.constants import IMAGENET_DEFAULT_MEAN, IMAGENET_DEFAULT_STD, DEFAULT_CROP_PCT...
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py
MotionRGBD-PAMI
MotionRGBD-PAMI-main/lib/datasets/distributed_sampler.py
''' This file is modified from: https://github.com/open-mmlab/mmdetection/blob/master/mmdet/datasets/samplers/distributed_sampler.py ''' import math import torch from torch.utils.data import DistributedSampler as _DistributedSampler class DistributedSampler(_DistributedSampler): def __init__(self, dataset, num_r...
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py
MotionRGBD-PAMI
MotionRGBD-PAMI-main/lib/datasets/NvGesture.py
''' Copyright (C) 2010-2021 Alibaba Group Holding Limited. ''' import torch from .base import Datasets from torchvision import transforms, set_image_backend import random, os from PIL import Image import numpy as np import logging # import accimage # set_image_backend('accimage') np.random.seed(123) class NvData(Data...
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py
MotionRGBD-PAMI
MotionRGBD-PAMI-main/lib/datasets/__init__.py
''' Copyright (C) 2010-2021 Alibaba Group Holding Limited. ''' from .build import *
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py