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Feneric/doxypypy
doxypypy/doxypypy.py
AstWalker.visit_Module
def visit_Module(self, node, **kwargs): """ Handles the module-level docstring. Process the module-level docstring and create appropriate Doxygen tags if autobrief option is set. """ containingNodes=kwargs.get('containingNodes', []) if self.options.debug: ...
python
def visit_Module(self, node, **kwargs): """ Handles the module-level docstring. Process the module-level docstring and create appropriate Doxygen tags if autobrief option is set. """ containingNodes=kwargs.get('containingNodes', []) if self.options.debug: ...
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Handles the module-level docstring. Process the module-level docstring and create appropriate Doxygen tags if autobrief option is set.
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a8555b15fa2a758ea8392372de31c0f635cc0d93
https://github.com/Feneric/doxypypy/blob/a8555b15fa2a758ea8392372de31c0f635cc0d93/doxypypy/doxypypy.py#L594-L614
train
Feneric/doxypypy
doxypypy/doxypypy.py
AstWalker.visit_Assign
def visit_Assign(self, node, **kwargs): """ Handles assignments within code. Variable assignments in Python are used to represent interface attributes in addition to basic variables. If an assignment appears to be an attribute, it gets labeled as such for Doxygen. If a variabl...
python
def visit_Assign(self, node, **kwargs): """ Handles assignments within code. Variable assignments in Python are used to represent interface attributes in addition to basic variables. If an assignment appears to be an attribute, it gets labeled as such for Doxygen. If a variabl...
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Handles assignments within code. Variable assignments in Python are used to represent interface attributes in addition to basic variables. If an assignment appears to be an attribute, it gets labeled as such for Doxygen. If a variable name uses Python mangling or is just a bed lump, i...
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a8555b15fa2a758ea8392372de31c0f635cc0d93
https://github.com/Feneric/doxypypy/blob/a8555b15fa2a758ea8392372de31c0f635cc0d93/doxypypy/doxypypy.py#L616-L656
train
Feneric/doxypypy
doxypypy/doxypypy.py
AstWalker.visit_Call
def visit_Call(self, node, **kwargs): """ Handles function calls within code. Function calls in Python are used to represent interface implementations in addition to their normal use. If a call appears to mark an implementation, it gets labeled as such for Doxygen. """ ...
python
def visit_Call(self, node, **kwargs): """ Handles function calls within code. Function calls in Python are used to represent interface implementations in addition to their normal use. If a call appears to mark an implementation, it gets labeled as such for Doxygen. """ ...
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Handles function calls within code. Function calls in Python are used to represent interface implementations in addition to their normal use. If a call appears to mark an implementation, it gets labeled as such for Doxygen.
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a8555b15fa2a758ea8392372de31c0f635cc0d93
https://github.com/Feneric/doxypypy/blob/a8555b15fa2a758ea8392372de31c0f635cc0d93/doxypypy/doxypypy.py#L658-L678
train
Feneric/doxypypy
doxypypy/doxypypy.py
AstWalker.visit_FunctionDef
def visit_FunctionDef(self, node, **kwargs): """ Handles function definitions within code. Process a function's docstring, keeping well aware of the function's context and whether or not it's part of an interface definition. """ if self.options.debug: stderr....
python
def visit_FunctionDef(self, node, **kwargs): """ Handles function definitions within code. Process a function's docstring, keeping well aware of the function's context and whether or not it's part of an interface definition. """ if self.options.debug: stderr....
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Handles function definitions within code. Process a function's docstring, keeping well aware of the function's context and whether or not it's part of an interface definition.
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a8555b15fa2a758ea8392372de31c0f635cc0d93
https://github.com/Feneric/doxypypy/blob/a8555b15fa2a758ea8392372de31c0f635cc0d93/doxypypy/doxypypy.py#L680-L708
train
Feneric/doxypypy
doxypypy/doxypypy.py
AstWalker.visit_ClassDef
def visit_ClassDef(self, node, **kwargs): """ Handles class definitions within code. Process the docstring. Note though that in Python Class definitions are used to define interfaces in addition to classes. If a class definition appears to be an interface definition tag it as a...
python
def visit_ClassDef(self, node, **kwargs): """ Handles class definitions within code. Process the docstring. Note though that in Python Class definitions are used to define interfaces in addition to classes. If a class definition appears to be an interface definition tag it as a...
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Handles class definitions within code. Process the docstring. Note though that in Python Class definitions are used to define interfaces in addition to classes. If a class definition appears to be an interface definition tag it as an interface definition for Doxygen. Otherwise tag it ...
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a8555b15fa2a758ea8392372de31c0f635cc0d93
https://github.com/Feneric/doxypypy/blob/a8555b15fa2a758ea8392372de31c0f635cc0d93/doxypypy/doxypypy.py#L710-L766
train
Feneric/doxypypy
doxypypy/doxypypy.py
AstWalker.parseLines
def parseLines(self): """Form an AST for the code and produce a new version of the source.""" inAst = parse(''.join(self.lines), self.inFilename) # Visit all the nodes in our tree and apply Doxygen tags to the source. self.visit(inAst)
python
def parseLines(self): """Form an AST for the code and produce a new version of the source.""" inAst = parse(''.join(self.lines), self.inFilename) # Visit all the nodes in our tree and apply Doxygen tags to the source. self.visit(inAst)
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Form an AST for the code and produce a new version of the source.
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a8555b15fa2a758ea8392372de31c0f635cc0d93
https://github.com/Feneric/doxypypy/blob/a8555b15fa2a758ea8392372de31c0f635cc0d93/doxypypy/doxypypy.py#L768-L772
train
Miserlou/django-zappa
django_zappa/handler.py
lambda_handler
def lambda_handler(event, context=None, settings_name="zappa_settings"): # NoQA """ An AWS Lambda function which parses specific API Gateway input into a WSGI request. The request get fed it to Django, processes the Django response, and returns that back to the API Gateway. """ time_start = da...
python
def lambda_handler(event, context=None, settings_name="zappa_settings"): # NoQA """ An AWS Lambda function which parses specific API Gateway input into a WSGI request. The request get fed it to Django, processes the Django response, and returns that back to the API Gateway. """ time_start = da...
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An AWS Lambda function which parses specific API Gateway input into a WSGI request. The request get fed it to Django, processes the Django response, and returns that back to the API Gateway.
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7a8083ab6257a0bf0f5c9ae460afabd4de4e2215
https://github.com/Miserlou/django-zappa/blob/7a8083ab6257a0bf0f5c9ae460afabd4de4e2215/django_zappa/handler.py#L41-L126
train
Miserlou/django-zappa
django_zappa/management/commands/zappa_command.py
ZappaCommand.require_settings
def require_settings(self, args, options): """ Load the ZAPPA_SETTINGS as we expect it. """ if not options.has_key('environment'): print( "You must call deploy with an environment name. \n python manage.py deploy <environment>") raise ImproperlyC...
python
def require_settings(self, args, options): """ Load the ZAPPA_SETTINGS as we expect it. """ if not options.has_key('environment'): print( "You must call deploy with an environment name. \n python manage.py deploy <environment>") raise ImproperlyC...
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Load the ZAPPA_SETTINGS as we expect it.
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7a8083ab6257a0bf0f5c9ae460afabd4de4e2215
https://github.com/Miserlou/django-zappa/blob/7a8083ab6257a0bf0f5c9ae460afabd4de4e2215/django_zappa/management/commands/zappa_command.py#L43-L98
train
adamcharnock/swiftwind
swiftwind/housemates/forms.py
HousemateCreateForm.clean_account
def clean_account(self): """Ensure this is an income account""" account = self.cleaned_data['account'] if not account: return if account.type != Account.TYPES.income: raise ValidationError('Account must be an income account') try: account.hou...
python
def clean_account(self): """Ensure this is an income account""" account = self.cleaned_data['account'] if not account: return if account.type != Account.TYPES.income: raise ValidationError('Account must be an income account') try: account.hou...
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Ensure this is an income account
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72c715800841c3b2feabded3f3b65b76388b4cea
https://github.com/adamcharnock/swiftwind/blob/72c715800841c3b2feabded3f3b65b76388b4cea/swiftwind/housemates/forms.py#L28-L44
train
adamcharnock/swiftwind
swiftwind/costs/models.py
RecurringCost.get_amount_normal
def get_amount_normal(self, billing_cycle): """Get the amount due on the given billing cycle For regular recurring costs this is simply `fixed_amount`. For one-off costs this is the portion of `fixed_amount` for the given billing_cycle. """ if self.is_one_off(): ...
python
def get_amount_normal(self, billing_cycle): """Get the amount due on the given billing cycle For regular recurring costs this is simply `fixed_amount`. For one-off costs this is the portion of `fixed_amount` for the given billing_cycle. """ if self.is_one_off(): ...
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Get the amount due on the given billing cycle For regular recurring costs this is simply `fixed_amount`. For one-off costs this is the portion of `fixed_amount` for the given billing_cycle.
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72c715800841c3b2feabded3f3b65b76388b4cea
https://github.com/adamcharnock/swiftwind/blob/72c715800841c3b2feabded3f3b65b76388b4cea/swiftwind/costs/models.py#L121-L144
train
adamcharnock/swiftwind
swiftwind/costs/models.py
RecurringCost.get_amount_arrears_balance
def get_amount_arrears_balance(self, billing_cycle): """Get the balance of to_account at the end of billing_cycle""" return self.to_account.balance( transaction__date__lt=billing_cycle.date_range.lower, )
python
def get_amount_arrears_balance(self, billing_cycle): """Get the balance of to_account at the end of billing_cycle""" return self.to_account.balance( transaction__date__lt=billing_cycle.date_range.lower, )
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Get the balance of to_account at the end of billing_cycle
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72c715800841c3b2feabded3f3b65b76388b4cea
https://github.com/adamcharnock/swiftwind/blob/72c715800841c3b2feabded3f3b65b76388b4cea/swiftwind/costs/models.py#L146-L150
train
adamcharnock/swiftwind
swiftwind/costs/models.py
RecurringCost.get_amount_arrears_transactions
def get_amount_arrears_transactions(self, billing_cycle): """Get the sum of all transaction legs in to_account during given billing cycle""" previous_billing_cycle = billing_cycle.get_previous() if not previous_billing_cycle: return Decimal(0) return self.to_account.balance( ...
python
def get_amount_arrears_transactions(self, billing_cycle): """Get the sum of all transaction legs in to_account during given billing cycle""" previous_billing_cycle = billing_cycle.get_previous() if not previous_billing_cycle: return Decimal(0) return self.to_account.balance( ...
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Get the sum of all transaction legs in to_account during given billing cycle
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72c715800841c3b2feabded3f3b65b76388b4cea
https://github.com/adamcharnock/swiftwind/blob/72c715800841c3b2feabded3f3b65b76388b4cea/swiftwind/costs/models.py#L152-L160
train
adamcharnock/swiftwind
swiftwind/costs/models.py
RecurringCost.enact
def enact(self, billing_cycle, disable_if_done=True): """Enact this RecurringCost for the given billing cycle This will: - Create a RecurredCost and the relevant Transactions & Transaction Legs - Mark this RecurringCost as disabled if this is its final billing cycle """ ...
python
def enact(self, billing_cycle, disable_if_done=True): """Enact this RecurringCost for the given billing cycle This will: - Create a RecurredCost and the relevant Transactions & Transaction Legs - Mark this RecurringCost as disabled if this is its final billing cycle """ ...
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Enact this RecurringCost for the given billing cycle This will: - Create a RecurredCost and the relevant Transactions & Transaction Legs - Mark this RecurringCost as disabled if this is its final billing cycle
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72c715800841c3b2feabded3f3b65b76388b4cea
https://github.com/adamcharnock/swiftwind/blob/72c715800841c3b2feabded3f3b65b76388b4cea/swiftwind/costs/models.py#L166-L194
train
adamcharnock/swiftwind
swiftwind/costs/models.py
RecurringCost.disable_if_done
def disable_if_done(self, commit=True): """Set disabled=True if we have billed all we need to Will only have an effect on one-off costs. """ if self._is_billing_complete() and not self.disabled: self.disabled = True if commit: self.save()
python
def disable_if_done(self, commit=True): """Set disabled=True if we have billed all we need to Will only have an effect on one-off costs. """ if self._is_billing_complete() and not self.disabled: self.disabled = True if commit: self.save()
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Set disabled=True if we have billed all we need to Will only have an effect on one-off costs.
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72c715800841c3b2feabded3f3b65b76388b4cea
https://github.com/adamcharnock/swiftwind/blob/72c715800841c3b2feabded3f3b65b76388b4cea/swiftwind/costs/models.py#L196-L205
train
adamcharnock/swiftwind
swiftwind/costs/models.py
RecurringCost.is_enactable
def is_enactable(self, as_of): """Can this RecurringCost be enacted""" return \ not self.disabled and \ not self.archived and \ not self._is_finished(as_of) and \ self._is_ready(as_of) and \ not self._is_billing_complete()
python
def is_enactable(self, as_of): """Can this RecurringCost be enacted""" return \ not self.disabled and \ not self.archived and \ not self._is_finished(as_of) and \ self._is_ready(as_of) and \ not self._is_billing_complete()
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Can this RecurringCost be enacted
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72c715800841c3b2feabded3f3b65b76388b4cea
https://github.com/adamcharnock/swiftwind/blob/72c715800841c3b2feabded3f3b65b76388b4cea/swiftwind/costs/models.py#L217-L224
train
adamcharnock/swiftwind
swiftwind/costs/models.py
RecurringCost.has_enacted
def has_enacted(self, billing_cycle): """Has this recurring cost already enacted transactions for given billing cycle?""" return RecurredCost.objects.filter( recurring_cost=self, billing_cycle=billing_cycle, ).exists()
python
def has_enacted(self, billing_cycle): """Has this recurring cost already enacted transactions for given billing cycle?""" return RecurredCost.objects.filter( recurring_cost=self, billing_cycle=billing_cycle, ).exists()
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Has this recurring cost already enacted transactions for given billing cycle?
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72c715800841c3b2feabded3f3b65b76388b4cea
https://github.com/adamcharnock/swiftwind/blob/72c715800841c3b2feabded3f3b65b76388b4cea/swiftwind/costs/models.py#L226-L231
train
adamcharnock/swiftwind
swiftwind/costs/models.py
RecurringCost._is_ready
def _is_ready(self, as_of): """Is the RecurringCost ready to be enacted as of the date `as_of` This determines if `as_of` precedes the start of `initial_billing_cycle`. If so, we should not be enacting this RecurringCost yet. Args: as_of (Date): """ if self....
python
def _is_ready(self, as_of): """Is the RecurringCost ready to be enacted as of the date `as_of` This determines if `as_of` precedes the start of `initial_billing_cycle`. If so, we should not be enacting this RecurringCost yet. Args: as_of (Date): """ if self....
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Is the RecurringCost ready to be enacted as of the date `as_of` This determines if `as_of` precedes the start of `initial_billing_cycle`. If so, we should not be enacting this RecurringCost yet. Args: as_of (Date):
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72c715800841c3b2feabded3f3b65b76388b4cea
https://github.com/adamcharnock/swiftwind/blob/72c715800841c3b2feabded3f3b65b76388b4cea/swiftwind/costs/models.py#L236-L248
train
adamcharnock/swiftwind
swiftwind/costs/models.py
RecurringCost._is_finished
def _is_finished(self, as_of): """Have the specified number of billing cycles been completed? If so, we should not be enacting this RecurringCost. """ if self.is_one_off(): last_billing_cycle = self.get_billing_cycles()[self.total_billing_cycles - 1] return last_...
python
def _is_finished(self, as_of): """Have the specified number of billing cycles been completed? If so, we should not be enacting this RecurringCost. """ if self.is_one_off(): last_billing_cycle = self.get_billing_cycles()[self.total_billing_cycles - 1] return last_...
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Have the specified number of billing cycles been completed? If so, we should not be enacting this RecurringCost.
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72c715800841c3b2feabded3f3b65b76388b4cea
https://github.com/adamcharnock/swiftwind/blob/72c715800841c3b2feabded3f3b65b76388b4cea/swiftwind/costs/models.py#L250-L259
train
adamcharnock/swiftwind
swiftwind/costs/models.py
RecurringCost._is_billing_complete
def _is_billing_complete(self): """Has the specified `fixed_amount` been billed? If so, we should not be enacting this RecurringCost. """ if self.is_one_off(): return self.get_billed_amount() >= Balance(self.fixed_amount, self.currency) else: return False
python
def _is_billing_complete(self): """Has the specified `fixed_amount` been billed? If so, we should not be enacting this RecurringCost. """ if self.is_one_off(): return self.get_billed_amount() >= Balance(self.fixed_amount, self.currency) else: return False
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Has the specified `fixed_amount` been billed? If so, we should not be enacting this RecurringCost.
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72c715800841c3b2feabded3f3b65b76388b4cea
https://github.com/adamcharnock/swiftwind/blob/72c715800841c3b2feabded3f3b65b76388b4cea/swiftwind/costs/models.py#L261-L269
train
adamcharnock/swiftwind
swiftwind/costs/models.py
RecurringCost._get_billing_cycle_number
def _get_billing_cycle_number(self, billing_cycle): """Gets the 1-indexed number of the billing cycle relative to the provided billing cycle""" begins_before_initial_date = billing_cycle.date_range.lower < self.initial_billing_cycle.date_range.lower if begins_before_initial_date: rai...
python
def _get_billing_cycle_number(self, billing_cycle): """Gets the 1-indexed number of the billing cycle relative to the provided billing cycle""" begins_before_initial_date = billing_cycle.date_range.lower < self.initial_billing_cycle.date_range.lower if begins_before_initial_date: rai...
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Gets the 1-indexed number of the billing cycle relative to the provided billing cycle
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72c715800841c3b2feabded3f3b65b76388b4cea
https://github.com/adamcharnock/swiftwind/blob/72c715800841c3b2feabded3f3b65b76388b4cea/swiftwind/costs/models.py#L271-L287
train
adamcharnock/swiftwind
swiftwind/costs/models.py
RecurringCostSplitQuerySet.split
def split(self, amount): """Split the value given by amount according to the RecurringCostSplit's portions Args: amount (Decimal): Returns: list[(RecurringCostSplit, Decimal)]: A list with elements in the form (RecurringCostSplit, Decimal) """ split_objs...
python
def split(self, amount): """Split the value given by amount according to the RecurringCostSplit's portions Args: amount (Decimal): Returns: list[(RecurringCostSplit, Decimal)]: A list with elements in the form (RecurringCostSplit, Decimal) """ split_objs...
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Split the value given by amount according to the RecurringCostSplit's portions Args: amount (Decimal): Returns: list[(RecurringCostSplit, Decimal)]: A list with elements in the form (RecurringCostSplit, Decimal)
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72c715800841c3b2feabded3f3b65b76388b4cea
https://github.com/adamcharnock/swiftwind/blob/72c715800841c3b2feabded3f3b65b76388b4cea/swiftwind/costs/models.py#L300-L320
train
adamcharnock/swiftwind
swiftwind/costs/models.py
RecurredCost.make_transaction
def make_transaction(self): """Create the transaction for this RecurredCost May only be used to create the RecurredCost's initial transaction. Returns: Transaction: The created transaction, also assigned to self.transaction. None if the amount is zero. """ if self.p...
python
def make_transaction(self): """Create the transaction for this RecurredCost May only be used to create the RecurredCost's initial transaction. Returns: Transaction: The created transaction, also assigned to self.transaction. None if the amount is zero. """ if self.p...
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Create the transaction for this RecurredCost May only be used to create the RecurredCost's initial transaction. Returns: Transaction: The created transaction, also assigned to self.transaction. None if the amount is zero.
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72c715800841c3b2feabded3f3b65b76388b4cea
https://github.com/adamcharnock/swiftwind/blob/72c715800841c3b2feabded3f3b65b76388b4cea/swiftwind/costs/models.py#L357-L405
train
adamcharnock/swiftwind
swiftwind/billing_cycle/models.py
BillingCycle.populate
def populate(cls, as_of=None): """Ensure the next X years of billing cycles exist """ return cls._populate(as_of=as_of or date.today(), delete=True)
python
def populate(cls, as_of=None): """Ensure the next X years of billing cycles exist """ return cls._populate(as_of=as_of or date.today(), delete=True)
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Ensure the next X years of billing cycles exist
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72c715800841c3b2feabded3f3b65b76388b4cea
https://github.com/adamcharnock/swiftwind/blob/72c715800841c3b2feabded3f3b65b76388b4cea/swiftwind/billing_cycle/models.py#L78-L81
train
adamcharnock/swiftwind
swiftwind/billing_cycle/models.py
BillingCycle._populate
def _populate(cls, as_of=None, delete=False): """Populate the table with billing cycles starting from `as_of` Args: as_of (date): The date at which to begin the populating delete (bool): Should future billing cycles be deleted? """ billing_cycle_helper = get_bi...
python
def _populate(cls, as_of=None, delete=False): """Populate the table with billing cycles starting from `as_of` Args: as_of (date): The date at which to begin the populating delete (bool): Should future billing cycles be deleted? """ billing_cycle_helper = get_bi...
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Populate the table with billing cycles starting from `as_of` Args: as_of (date): The date at which to begin the populating delete (bool): Should future billing cycles be deleted?
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72c715800841c3b2feabded3f3b65b76388b4cea
https://github.com/adamcharnock/swiftwind/blob/72c715800841c3b2feabded3f3b65b76388b4cea/swiftwind/billing_cycle/models.py#L92-L146
train
adamcharnock/swiftwind
swiftwind/billing_cycle/models.py
BillingCycle.get_next
def get_next(self): """Get the billing cycle after this one. May return None""" return BillingCycle.objects.filter(date_range__gt=self.date_range).order_by('date_range').first()
python
def get_next(self): """Get the billing cycle after this one. May return None""" return BillingCycle.objects.filter(date_range__gt=self.date_range).order_by('date_range').first()
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Get the billing cycle after this one. May return None
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72c715800841c3b2feabded3f3b65b76388b4cea
https://github.com/adamcharnock/swiftwind/blob/72c715800841c3b2feabded3f3b65b76388b4cea/swiftwind/billing_cycle/models.py#L148-L150
train
adamcharnock/swiftwind
swiftwind/billing_cycle/models.py
BillingCycle.get_previous
def get_previous(self): """Get the billing cycle prior to this one. May return None""" return BillingCycle.objects.filter(date_range__lt=self.date_range).order_by('date_range').last()
python
def get_previous(self): """Get the billing cycle prior to this one. May return None""" return BillingCycle.objects.filter(date_range__lt=self.date_range).order_by('date_range').last()
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Get the billing cycle prior to this one. May return None
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72c715800841c3b2feabded3f3b65b76388b4cea
https://github.com/adamcharnock/swiftwind/blob/72c715800841c3b2feabded3f3b65b76388b4cea/swiftwind/billing_cycle/models.py#L152-L154
train
adamcharnock/swiftwind
swiftwind/billing_cycle/models.py
BillingCycle.is_reconciled
def is_reconciled(self): """Have transactions been imported and reconciled for this billing cycle?""" from hordak.models import StatementImport, StatementLine since = datetime( self.date_range.lower.year, self.date_range.lower.month, self.date_range.lower.day,...
python
def is_reconciled(self): """Have transactions been imported and reconciled for this billing cycle?""" from hordak.models import StatementImport, StatementLine since = datetime( self.date_range.lower.year, self.date_range.lower.month, self.date_range.lower.day,...
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Have transactions been imported and reconciled for this billing cycle?
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72c715800841c3b2feabded3f3b65b76388b4cea
https://github.com/adamcharnock/swiftwind/blob/72c715800841c3b2feabded3f3b65b76388b4cea/swiftwind/billing_cycle/models.py#L156-L178
train
di/pip-api
pip_api/_hash.py
hash
def hash(filename, algorithm='sha256'): """ Hash the given filename. Unavailable in `pip<8.0.0` """ if incompatible: raise Incompatible if algorithm not in ['sha256', 'sha384', 'sha512']: raise InvalidArguments('Algorithm {} not supported'.format(algorithm)) result = call('hash...
python
def hash(filename, algorithm='sha256'): """ Hash the given filename. Unavailable in `pip<8.0.0` """ if incompatible: raise Incompatible if algorithm not in ['sha256', 'sha384', 'sha512']: raise InvalidArguments('Algorithm {} not supported'.format(algorithm)) result = call('hash...
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Hash the given filename. Unavailable in `pip<8.0.0`
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6824afa634484eca258b2f757a35b7df8ebf56d7
https://github.com/di/pip-api/blob/6824afa634484eca258b2f757a35b7df8ebf56d7/pip_api/_hash.py#L10-L24
train
adamcharnock/swiftwind
swiftwind/core/templatetags/swiftwind_utilities.py
partition
def partition(list_, columns=2): """ Break a list into ``columns`` number of columns. """ iter_ = iter(list_) columns = int(columns) rows = [] while True: row = [] for column_number in range(1, columns + 1): try: value = six.next(iter_) ...
python
def partition(list_, columns=2): """ Break a list into ``columns`` number of columns. """ iter_ = iter(list_) columns = int(columns) rows = [] while True: row = [] for column_number in range(1, columns + 1): try: value = six.next(iter_) ...
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Break a list into ``columns`` number of columns.
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72c715800841c3b2feabded3f3b65b76388b4cea
https://github.com/adamcharnock/swiftwind/blob/72c715800841c3b2feabded3f3b65b76388b4cea/swiftwind/core/templatetags/swiftwind_utilities.py#L8-L29
train
adamcharnock/swiftwind
swiftwind/dashboard/views.py
DashboardView.get_balance_context
def get_balance_context(self): """Get the high level balances""" bank_account = Account.objects.get(name='Bank') return dict( bank=bank_account, retained_earnings_accounts=Account.objects.filter(parent__name='Retained Earnings'), )
python
def get_balance_context(self): """Get the high level balances""" bank_account = Account.objects.get(name='Bank') return dict( bank=bank_account, retained_earnings_accounts=Account.objects.filter(parent__name='Retained Earnings'), )
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Get the high level balances
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72c715800841c3b2feabded3f3b65b76388b4cea
https://github.com/adamcharnock/swiftwind/blob/72c715800841c3b2feabded3f3b65b76388b4cea/swiftwind/dashboard/views.py#L15-L22
train
adamcharnock/swiftwind
swiftwind/dashboard/views.py
DashboardView.get_accounts_context
def get_accounts_context(self): """Get the accounts we may want to display""" income_parent = Account.objects.get(name='Income') housemate_parent = Account.objects.get(name='Housemate Income') expense_parent = Account.objects.get(name='Expenses') current_liabilities_parent = Acco...
python
def get_accounts_context(self): """Get the accounts we may want to display""" income_parent = Account.objects.get(name='Income') housemate_parent = Account.objects.get(name='Housemate Income') expense_parent = Account.objects.get(name='Expenses') current_liabilities_parent = Acco...
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Get the accounts we may want to display
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72c715800841c3b2feabded3f3b65b76388b4cea
https://github.com/adamcharnock/swiftwind/blob/72c715800841c3b2feabded3f3b65b76388b4cea/swiftwind/dashboard/views.py#L24-L38
train
tsroten/zhon
zhon/pinyin.py
_build_syl
def _build_syl(vowels, tone_numbers=False): """Builds a Pinyin syllable re pattern. Syllables can be preceded by a middle dot (tone mark). Syllables that end in a consonant are only valid if they aren't followed directly by a vowel with no apostrophe in between. The rough approach used to validate...
python
def _build_syl(vowels, tone_numbers=False): """Builds a Pinyin syllable re pattern. Syllables can be preceded by a middle dot (tone mark). Syllables that end in a consonant are only valid if they aren't followed directly by a vowel with no apostrophe in between. The rough approach used to validate...
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09bf543696277f71de502506984661a60d24494c
https://github.com/tsroten/zhon/blob/09bf543696277f71de502506984661a60d24494c/zhon/pinyin.py#L56-L125
train
tsroten/zhon
zhon/pinyin.py
_build_word
def _build_word(syl, vowels): """Builds a Pinyin word re pattern from a Pinyin syllable re pattern. A word is defined as a series of consecutive valid Pinyin syllables with optional hyphens and apostrophes interspersed. Hyphens must be followed immediately by another valid Pinyin syllable. Apostrophes ...
python
def _build_word(syl, vowels): """Builds a Pinyin word re pattern from a Pinyin syllable re pattern. A word is defined as a series of consecutive valid Pinyin syllables with optional hyphens and apostrophes interspersed. Hyphens must be followed immediately by another valid Pinyin syllable. Apostrophes ...
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09bf543696277f71de502506984661a60d24494c
https://github.com/tsroten/zhon/blob/09bf543696277f71de502506984661a60d24494c/zhon/pinyin.py#L128-L139
train
tsroten/zhon
zhon/pinyin.py
_build_sentence
def _build_sentence(word): """Builds a Pinyin sentence re pattern from a Pinyin word re pattern. A sentence is defined as a series of valid Pinyin words, punctuation (non-stops), and spaces followed by a single stop and zero or more container-closing punctuation marks (e.g. apostrophe and brackets). ...
python
def _build_sentence(word): """Builds a Pinyin sentence re pattern from a Pinyin word re pattern. A sentence is defined as a series of valid Pinyin words, punctuation (non-stops), and spaces followed by a single stop and zero or more container-closing punctuation marks (e.g. apostrophe and brackets). ...
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Builds a Pinyin sentence re pattern from a Pinyin word re pattern. A sentence is defined as a series of valid Pinyin words, punctuation (non-stops), and spaces followed by a single stop and zero or more container-closing punctuation marks (e.g. apostrophe and brackets).
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09bf543696277f71de502506984661a60d24494c
https://github.com/tsroten/zhon/blob/09bf543696277f71de502506984661a60d24494c/zhon/pinyin.py#L142-L154
train
choderalab/pymbar
examples/parallel-tempering-2dpmf/parallel-tempering-2dpmf.py
read_file
def read_file(filename): """Read contents of the specified file. Parameters: ----------- filename : str The name of the file to be read Returns: lines : list of str The contents of the file, split by line """ infile = open(filename, 'r') lines = infile.readlines() infile.cl...
python
def read_file(filename): """Read contents of the specified file. Parameters: ----------- filename : str The name of the file to be read Returns: lines : list of str The contents of the file, split by line """ infile = open(filename, 'r') lines = infile.readlines() infile.cl...
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Read contents of the specified file. Parameters: ----------- filename : str The name of the file to be read Returns: lines : list of str The contents of the file, split by line
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69d1f0ff680e9ac1c6a51a5a207ea28f3ed86740
https://github.com/choderalab/pymbar/blob/69d1f0ff680e9ac1c6a51a5a207ea28f3ed86740/examples/parallel-tempering-2dpmf/parallel-tempering-2dpmf.py#L58-L76
train
choderalab/pymbar
pymbar/old_mbar.py
MBAR._computeWeights
def _computeWeights(self, logform=False, include_nonzero=False, recalc_denom=True, return_f_k=False): """Compute the normalized weights corresponding to samples for the given reduced potential. Compute the normalized weights corresponding to samples for the given reduced potential. Also stores ...
python
def _computeWeights(self, logform=False, include_nonzero=False, recalc_denom=True, return_f_k=False): """Compute the normalized weights corresponding to samples for the given reduced potential. Compute the normalized weights corresponding to samples for the given reduced potential. Also stores ...
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Compute the normalized weights corresponding to samples for the given reduced potential. Compute the normalized weights corresponding to samples for the given reduced potential. Also stores the all_log_denom array for reuse. Parameters ---------- logform : bool, optional ...
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69d1f0ff680e9ac1c6a51a5a207ea28f3ed86740
https://github.com/choderalab/pymbar/blob/69d1f0ff680e9ac1c6a51a5a207ea28f3ed86740/pymbar/old_mbar.py#L1654-L1725
train
choderalab/pymbar
pymbar/old_mbar.py
MBAR._pseudoinverse
def _pseudoinverse(self, A, tol=1.0e-10): """ Compute the Moore-Penrose pseudoinverse. REQUIRED ARGUMENTS A (np KxK matrix) - the square matrix whose pseudoinverse is to be computed RETURN VALUES Ainv (np KxK matrix) - the pseudoinverse OPTIONAL VALUES ...
python
def _pseudoinverse(self, A, tol=1.0e-10): """ Compute the Moore-Penrose pseudoinverse. REQUIRED ARGUMENTS A (np KxK matrix) - the square matrix whose pseudoinverse is to be computed RETURN VALUES Ainv (np KxK matrix) - the pseudoinverse OPTIONAL VALUES ...
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69d1f0ff680e9ac1c6a51a5a207ea28f3ed86740
https://github.com/choderalab/pymbar/blob/69d1f0ff680e9ac1c6a51a5a207ea28f3ed86740/pymbar/old_mbar.py#L1729-L1789
train
choderalab/pymbar
pymbar/old_mbar.py
MBAR._zerosamestates
def _zerosamestates(self, A): """ zeros out states that should be identical REQUIRED ARGUMENTS A: the matrix whose entries are to be zeroed. """ for pair in self.samestates: A[pair[0], pair[1]] = 0 A[pair[1], pair[0]] = 0
python
def _zerosamestates(self, A): """ zeros out states that should be identical REQUIRED ARGUMENTS A: the matrix whose entries are to be zeroed. """ for pair in self.samestates: A[pair[0], pair[1]] = 0 A[pair[1], pair[0]] = 0
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zeros out states that should be identical REQUIRED ARGUMENTS A: the matrix whose entries are to be zeroed.
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69d1f0ff680e9ac1c6a51a5a207ea28f3ed86740
https://github.com/choderalab/pymbar/blob/69d1f0ff680e9ac1c6a51a5a207ea28f3ed86740/pymbar/old_mbar.py#L1792-L1804
train
choderalab/pymbar
pymbar/old_mbar.py
MBAR._initializeFreeEnergies
def _initializeFreeEnergies(self, verbose=False, method='zeros'): """ Compute an initial guess at the relative free energies. OPTIONAL ARGUMENTS verbose (boolean) - If True, will print debug information (default: False) method (string) - Method for initializing guess at free ene...
python
def _initializeFreeEnergies(self, verbose=False, method='zeros'): """ Compute an initial guess at the relative free energies. OPTIONAL ARGUMENTS verbose (boolean) - If True, will print debug information (default: False) method (string) - Method for initializing guess at free ene...
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Compute an initial guess at the relative free energies. OPTIONAL ARGUMENTS verbose (boolean) - If True, will print debug information (default: False) method (string) - Method for initializing guess at free energies. 'zeros' - all free energies are initially set to zero 'mean-red...
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69d1f0ff680e9ac1c6a51a5a207ea28f3ed86740
https://github.com/choderalab/pymbar/blob/69d1f0ff680e9ac1c6a51a5a207ea28f3ed86740/pymbar/old_mbar.py#L2009-L2074
train
choderalab/pymbar
pymbar/old_mbar.py
MBAR._amIdoneIterating
def _amIdoneIterating(self, f_k_new, relative_tolerance, iteration, maximum_iterations, print_warning, verbose): """ Convenience function to test whether we are done iterating, same for all iteration types REQUIRED ARGUMENTS f_k_new (array): new free energies f_k (array) : o...
python
def _amIdoneIterating(self, f_k_new, relative_tolerance, iteration, maximum_iterations, print_warning, verbose): """ Convenience function to test whether we are done iterating, same for all iteration types REQUIRED ARGUMENTS f_k_new (array): new free energies f_k (array) : o...
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Convenience function to test whether we are done iterating, same for all iteration types REQUIRED ARGUMENTS f_k_new (array): new free energies f_k (array) : older free energies relative_tolerance (float): the relative tolerance for terminating verbose (bool): verbose res...
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69d1f0ff680e9ac1c6a51a5a207ea28f3ed86740
https://github.com/choderalab/pymbar/blob/69d1f0ff680e9ac1c6a51a5a207ea28f3ed86740/pymbar/old_mbar.py#L2152-L2212
train
choderalab/pymbar
pymbar/old_mbar.py
MBAR._selfConsistentIteration
def _selfConsistentIteration(self, relative_tolerance=1.0e-6, maximum_iterations=1000, verbose=True, print_warning=False): """ Determine free energies by self-consistent iteration. OPTIONAL ARGUMENTS relative_tolerance (float between 0 and 1) - relative tolerance for convergence (def...
python
def _selfConsistentIteration(self, relative_tolerance=1.0e-6, maximum_iterations=1000, verbose=True, print_warning=False): """ Determine free energies by self-consistent iteration. OPTIONAL ARGUMENTS relative_tolerance (float between 0 and 1) - relative tolerance for convergence (def...
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Determine free energies by self-consistent iteration. OPTIONAL ARGUMENTS relative_tolerance (float between 0 and 1) - relative tolerance for convergence (default 1.0e-5) maximum_iterations (int) - maximum number of self-consistent iterations (default 1000) verbose (boolean) - ver...
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69d1f0ff680e9ac1c6a51a5a207ea28f3ed86740
https://github.com/choderalab/pymbar/blob/69d1f0ff680e9ac1c6a51a5a207ea28f3ed86740/pymbar/old_mbar.py#L2215-L2251
train
choderalab/pymbar
pymbar/mbar.py
MBAR._pseudoinverse
def _pseudoinverse(self, A, tol=1.0e-10): """Compute the Moore-Penrose pseudoinverse, wraps np.linalg.pinv REQUIRED ARGUMENTS A (np KxK matrix) - the square matrix whose pseudoinverse is to be computed RETURN VALUES Ainv (np KxK matrix) - the pseudoinverse OPTIONAL...
python
def _pseudoinverse(self, A, tol=1.0e-10): """Compute the Moore-Penrose pseudoinverse, wraps np.linalg.pinv REQUIRED ARGUMENTS A (np KxK matrix) - the square matrix whose pseudoinverse is to be computed RETURN VALUES Ainv (np KxK matrix) - the pseudoinverse OPTIONAL...
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Compute the Moore-Penrose pseudoinverse, wraps np.linalg.pinv REQUIRED ARGUMENTS A (np KxK matrix) - the square matrix whose pseudoinverse is to be computed RETURN VALUES Ainv (np KxK matrix) - the pseudoinverse OPTIONAL VALUES tol - the tolerance (relative to la...
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69d1f0ff680e9ac1c6a51a5a207ea28f3ed86740
https://github.com/choderalab/pymbar/blob/69d1f0ff680e9ac1c6a51a5a207ea28f3ed86740/pymbar/mbar.py#L1546-L1564
train
choderalab/pymbar
pymbar/mbar_solvers.py
validate_inputs
def validate_inputs(u_kn, N_k, f_k): """Check types and return inputs for MBAR calculations. Parameters ---------- u_kn or q_kn : np.ndarray, shape=(n_states, n_samples), dtype='float' The reduced potential energies or unnormalized probabilities N_k : np.ndarray, shape=(n_states), dtype='in...
python
def validate_inputs(u_kn, N_k, f_k): """Check types and return inputs for MBAR calculations. Parameters ---------- u_kn or q_kn : np.ndarray, shape=(n_states, n_samples), dtype='float' The reduced potential energies or unnormalized probabilities N_k : np.ndarray, shape=(n_states), dtype='in...
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Check types and return inputs for MBAR calculations. Parameters ---------- u_kn or q_kn : np.ndarray, shape=(n_states, n_samples), dtype='float' The reduced potential energies or unnormalized probabilities N_k : np.ndarray, shape=(n_states), dtype='int' The number of samples in each sta...
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69d1f0ff680e9ac1c6a51a5a207ea28f3ed86740
https://github.com/choderalab/pymbar/blob/69d1f0ff680e9ac1c6a51a5a207ea28f3ed86740/pymbar/mbar_solvers.py#L17-L44
train
choderalab/pymbar
pymbar/mbar_solvers.py
self_consistent_update
def self_consistent_update(u_kn, N_k, f_k): """Return an improved guess for the dimensionless free energies Parameters ---------- u_kn : np.ndarray, shape=(n_states, n_samples), dtype='float' The reduced potential energies, i.e. -log unnormalized probabilities N_k : np.ndarray, shape=(n_sta...
python
def self_consistent_update(u_kn, N_k, f_k): """Return an improved guess for the dimensionless free energies Parameters ---------- u_kn : np.ndarray, shape=(n_states, n_samples), dtype='float' The reduced potential energies, i.e. -log unnormalized probabilities N_k : np.ndarray, shape=(n_sta...
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Return an improved guess for the dimensionless free energies Parameters ---------- u_kn : np.ndarray, shape=(n_states, n_samples), dtype='float' The reduced potential energies, i.e. -log unnormalized probabilities N_k : np.ndarray, shape=(n_states), dtype='int' The number of samples in ...
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69d1f0ff680e9ac1c6a51a5a207ea28f3ed86740
https://github.com/choderalab/pymbar/blob/69d1f0ff680e9ac1c6a51a5a207ea28f3ed86740/pymbar/mbar_solvers.py#L47-L77
train
choderalab/pymbar
pymbar/mbar_solvers.py
mbar_gradient
def mbar_gradient(u_kn, N_k, f_k): """Gradient of MBAR objective function. Parameters ---------- u_kn : np.ndarray, shape=(n_states, n_samples), dtype='float' The reduced potential energies, i.e. -log unnormalized probabilities N_k : np.ndarray, shape=(n_states), dtype='int' The num...
python
def mbar_gradient(u_kn, N_k, f_k): """Gradient of MBAR objective function. Parameters ---------- u_kn : np.ndarray, shape=(n_states, n_samples), dtype='float' The reduced potential energies, i.e. -log unnormalized probabilities N_k : np.ndarray, shape=(n_states), dtype='int' The num...
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Gradient of MBAR objective function. Parameters ---------- u_kn : np.ndarray, shape=(n_states, n_samples), dtype='float' The reduced potential energies, i.e. -log unnormalized probabilities N_k : np.ndarray, shape=(n_states), dtype='int' The number of samples in each state f_k : np....
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69d1f0ff680e9ac1c6a51a5a207ea28f3ed86740
https://github.com/choderalab/pymbar/blob/69d1f0ff680e9ac1c6a51a5a207ea28f3ed86740/pymbar/mbar_solvers.py#L80-L105
train
choderalab/pymbar
pymbar/mbar_solvers.py
mbar_objective_and_gradient
def mbar_objective_and_gradient(u_kn, N_k, f_k): """Calculates both objective function and gradient for MBAR. Parameters ---------- u_kn : np.ndarray, shape=(n_states, n_samples), dtype='float' The reduced potential energies, i.e. -log unnormalized probabilities N_k : np.ndarray, shape=(n_s...
python
def mbar_objective_and_gradient(u_kn, N_k, f_k): """Calculates both objective function and gradient for MBAR. Parameters ---------- u_kn : np.ndarray, shape=(n_states, n_samples), dtype='float' The reduced potential energies, i.e. -log unnormalized probabilities N_k : np.ndarray, shape=(n_s...
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Calculates both objective function and gradient for MBAR. Parameters ---------- u_kn : np.ndarray, shape=(n_states, n_samples), dtype='float' The reduced potential energies, i.e. -log unnormalized probabilities N_k : np.ndarray, shape=(n_states), dtype='int' The number of samples in eac...
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69d1f0ff680e9ac1c6a51a5a207ea28f3ed86740
https://github.com/choderalab/pymbar/blob/69d1f0ff680e9ac1c6a51a5a207ea28f3ed86740/pymbar/mbar_solvers.py#L108-L149
train
choderalab/pymbar
pymbar/mbar_solvers.py
mbar_hessian
def mbar_hessian(u_kn, N_k, f_k): """Hessian of MBAR objective function. Parameters ---------- u_kn : np.ndarray, shape=(n_states, n_samples), dtype='float' The reduced potential energies, i.e. -log unnormalized probabilities N_k : np.ndarray, shape=(n_states), dtype='int' The numbe...
python
def mbar_hessian(u_kn, N_k, f_k): """Hessian of MBAR objective function. Parameters ---------- u_kn : np.ndarray, shape=(n_states, n_samples), dtype='float' The reduced potential energies, i.e. -log unnormalized probabilities N_k : np.ndarray, shape=(n_states), dtype='int' The numbe...
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Hessian of MBAR objective function. Parameters ---------- u_kn : np.ndarray, shape=(n_states, n_samples), dtype='float' The reduced potential energies, i.e. -log unnormalized probabilities N_k : np.ndarray, shape=(n_states), dtype='int' The number of samples in each state f_k : np.n...
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69d1f0ff680e9ac1c6a51a5a207ea28f3ed86740
https://github.com/choderalab/pymbar/blob/69d1f0ff680e9ac1c6a51a5a207ea28f3ed86740/pymbar/mbar_solvers.py#L152-L182
train
choderalab/pymbar
pymbar/mbar_solvers.py
mbar_log_W_nk
def mbar_log_W_nk(u_kn, N_k, f_k): """Calculate the log weight matrix. Parameters ---------- u_kn : np.ndarray, shape=(n_states, n_samples), dtype='float' The reduced potential energies, i.e. -log unnormalized probabilities N_k : np.ndarray, shape=(n_states), dtype='int' The number ...
python
def mbar_log_W_nk(u_kn, N_k, f_k): """Calculate the log weight matrix. Parameters ---------- u_kn : np.ndarray, shape=(n_states, n_samples), dtype='float' The reduced potential energies, i.e. -log unnormalized probabilities N_k : np.ndarray, shape=(n_states), dtype='int' The number ...
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Calculate the log weight matrix. Parameters ---------- u_kn : np.ndarray, shape=(n_states, n_samples), dtype='float' The reduced potential energies, i.e. -log unnormalized probabilities N_k : np.ndarray, shape=(n_states), dtype='int' The number of samples in each state f_k : np.ndar...
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69d1f0ff680e9ac1c6a51a5a207ea28f3ed86740
https://github.com/choderalab/pymbar/blob/69d1f0ff680e9ac1c6a51a5a207ea28f3ed86740/pymbar/mbar_solvers.py#L185-L210
train
choderalab/pymbar
pymbar/mbar_solvers.py
mbar_W_nk
def mbar_W_nk(u_kn, N_k, f_k): """Calculate the weight matrix. Parameters ---------- u_kn : np.ndarray, shape=(n_states, n_samples), dtype='float' The reduced potential energies, i.e. -log unnormalized probabilities N_k : np.ndarray, shape=(n_states), dtype='int' The number of sampl...
python
def mbar_W_nk(u_kn, N_k, f_k): """Calculate the weight matrix. Parameters ---------- u_kn : np.ndarray, shape=(n_states, n_samples), dtype='float' The reduced potential energies, i.e. -log unnormalized probabilities N_k : np.ndarray, shape=(n_states), dtype='int' The number of sampl...
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Calculate the weight matrix. Parameters ---------- u_kn : np.ndarray, shape=(n_states, n_samples), dtype='float' The reduced potential energies, i.e. -log unnormalized probabilities N_k : np.ndarray, shape=(n_states), dtype='int' The number of samples in each state f_k : np.ndarray,...
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69d1f0ff680e9ac1c6a51a5a207ea28f3ed86740
https://github.com/choderalab/pymbar/blob/69d1f0ff680e9ac1c6a51a5a207ea28f3ed86740/pymbar/mbar_solvers.py#L213-L234
train
choderalab/pymbar
pymbar/mbar_solvers.py
precondition_u_kn
def precondition_u_kn(u_kn, N_k, f_k): """Subtract a sample-dependent constant from u_kn to improve precision Parameters ---------- u_kn : np.ndarray, shape=(n_states, n_samples), dtype='float' The reduced potential energies, i.e. -log unnormalized probabilities N_k : np.ndarray, shape=(n_s...
python
def precondition_u_kn(u_kn, N_k, f_k): """Subtract a sample-dependent constant from u_kn to improve precision Parameters ---------- u_kn : np.ndarray, shape=(n_states, n_samples), dtype='float' The reduced potential energies, i.e. -log unnormalized probabilities N_k : np.ndarray, shape=(n_s...
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Subtract a sample-dependent constant from u_kn to improve precision Parameters ---------- u_kn : np.ndarray, shape=(n_states, n_samples), dtype='float' The reduced potential energies, i.e. -log unnormalized probabilities N_k : np.ndarray, shape=(n_states), dtype='int' The number of samp...
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69d1f0ff680e9ac1c6a51a5a207ea28f3ed86740
https://github.com/choderalab/pymbar/blob/69d1f0ff680e9ac1c6a51a5a207ea28f3ed86740/pymbar/mbar_solvers.py#L352-L380
train
choderalab/pymbar
pymbar/mbar_solvers.py
solve_mbar_once
def solve_mbar_once(u_kn_nonzero, N_k_nonzero, f_k_nonzero, method="hybr", tol=1E-12, options=None): """Solve MBAR self-consistent equations using some form of equation solver. Parameters ---------- u_kn_nonzero : np.ndarray, shape=(n_states, n_samples), dtype='float' The reduced potential ener...
python
def solve_mbar_once(u_kn_nonzero, N_k_nonzero, f_k_nonzero, method="hybr", tol=1E-12, options=None): """Solve MBAR self-consistent equations using some form of equation solver. Parameters ---------- u_kn_nonzero : np.ndarray, shape=(n_states, n_samples), dtype='float' The reduced potential ener...
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Solve MBAR self-consistent equations using some form of equation solver. Parameters ---------- u_kn_nonzero : np.ndarray, shape=(n_states, n_samples), dtype='float' The reduced potential energies, i.e. -log unnormalized probabilities for the nonempty states N_k_nonzero : np.ndarray, sha...
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69d1f0ff680e9ac1c6a51a5a207ea28f3ed86740
https://github.com/choderalab/pymbar/blob/69d1f0ff680e9ac1c6a51a5a207ea28f3ed86740/pymbar/mbar_solvers.py#L383-L465
train
choderalab/pymbar
pymbar/mbar_solvers.py
solve_mbar
def solve_mbar(u_kn_nonzero, N_k_nonzero, f_k_nonzero, solver_protocol=None): """Solve MBAR self-consistent equations using some sequence of equation solvers. Parameters ---------- u_kn_nonzero : np.ndarray, shape=(n_states, n_samples), dtype='float' The reduced potential energies, i.e. -log un...
python
def solve_mbar(u_kn_nonzero, N_k_nonzero, f_k_nonzero, solver_protocol=None): """Solve MBAR self-consistent equations using some sequence of equation solvers. Parameters ---------- u_kn_nonzero : np.ndarray, shape=(n_states, n_samples), dtype='float' The reduced potential energies, i.e. -log un...
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Solve MBAR self-consistent equations using some sequence of equation solvers. Parameters ---------- u_kn_nonzero : np.ndarray, shape=(n_states, n_samples), dtype='float' The reduced potential energies, i.e. -log unnormalized probabilities for the nonempty states N_k_nonzero : np.ndarray...
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69d1f0ff680e9ac1c6a51a5a207ea28f3ed86740
https://github.com/choderalab/pymbar/blob/69d1f0ff680e9ac1c6a51a5a207ea28f3ed86740/pymbar/mbar_solvers.py#L468-L518
train
choderalab/pymbar
pymbar/mbar_solvers.py
solve_mbar_for_all_states
def solve_mbar_for_all_states(u_kn, N_k, f_k, solver_protocol): """Solve for free energies of states with samples, then calculate for empty states. Parameters ---------- u_kn : np.ndarray, shape=(n_states, n_samples), dtype='float' The reduced potential energies, i.e. -log unnormalized prob...
python
def solve_mbar_for_all_states(u_kn, N_k, f_k, solver_protocol): """Solve for free energies of states with samples, then calculate for empty states. Parameters ---------- u_kn : np.ndarray, shape=(n_states, n_samples), dtype='float' The reduced potential energies, i.e. -log unnormalized prob...
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Solve for free energies of states with samples, then calculate for empty states. Parameters ---------- u_kn : np.ndarray, shape=(n_states, n_samples), dtype='float' The reduced potential energies, i.e. -log unnormalized probabilities N_k : np.ndarray, shape=(n_states), dtype='int' T...
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69d1f0ff680e9ac1c6a51a5a207ea28f3ed86740
https://github.com/choderalab/pymbar/blob/69d1f0ff680e9ac1c6a51a5a207ea28f3ed86740/pymbar/mbar_solvers.py#L521-L558
train
choderalab/pymbar
examples/constant-force-optical-trap/force-bias-optical-trap.py
construct_nonuniform_bins
def construct_nonuniform_bins(x_n, nbins): """Construct histogram using bins of unequal size to ensure approximately equal population in each bin. ARGUMENTS x_n (1D numpy array of floats) - x_n[n] is data point n RETURN VALUES bin_left_boundary_i (1D numpy array of floats) - data in bin i will...
python
def construct_nonuniform_bins(x_n, nbins): """Construct histogram using bins of unequal size to ensure approximately equal population in each bin. ARGUMENTS x_n (1D numpy array of floats) - x_n[n] is data point n RETURN VALUES bin_left_boundary_i (1D numpy array of floats) - data in bin i will...
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Construct histogram using bins of unequal size to ensure approximately equal population in each bin. ARGUMENTS x_n (1D numpy array of floats) - x_n[n] is data point n RETURN VALUES bin_left_boundary_i (1D numpy array of floats) - data in bin i will satisfy bin_left_boundary_i[i] <= x < bin_left_bo...
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69d1f0ff680e9ac1c6a51a5a207ea28f3ed86740
https://github.com/choderalab/pymbar/blob/69d1f0ff680e9ac1c6a51a5a207ea28f3ed86740/examples/constant-force-optical-trap/force-bias-optical-trap.py#L47-L104
train
choderalab/pymbar
pymbar/timeseries.py
integratedAutocorrelationTime
def integratedAutocorrelationTime(A_n, B_n=None, fast=False, mintime=3): """Estimate the integrated autocorrelation time. See Also -------- statisticalInefficiency """ g = statisticalInefficiency(A_n, B_n, fast, mintime) tau = (g - 1.0) / 2.0 return tau
python
def integratedAutocorrelationTime(A_n, B_n=None, fast=False, mintime=3): """Estimate the integrated autocorrelation time. See Also -------- statisticalInefficiency """ g = statisticalInefficiency(A_n, B_n, fast, mintime) tau = (g - 1.0) / 2.0 return tau
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Estimate the integrated autocorrelation time. See Also -------- statisticalInefficiency
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69d1f0ff680e9ac1c6a51a5a207ea28f3ed86740
https://github.com/choderalab/pymbar/blob/69d1f0ff680e9ac1c6a51a5a207ea28f3ed86740/pymbar/timeseries.py#L357-L368
train
choderalab/pymbar
pymbar/timeseries.py
integratedAutocorrelationTimeMultiple
def integratedAutocorrelationTimeMultiple(A_kn, fast=False): """Estimate the integrated autocorrelation time from multiple timeseries. See Also -------- statisticalInefficiencyMultiple """ g = statisticalInefficiencyMultiple(A_kn, fast, False) tau = (g - 1.0) / 2.0 return tau
python
def integratedAutocorrelationTimeMultiple(A_kn, fast=False): """Estimate the integrated autocorrelation time from multiple timeseries. See Also -------- statisticalInefficiencyMultiple """ g = statisticalInefficiencyMultiple(A_kn, fast, False) tau = (g - 1.0) / 2.0 return tau
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Estimate the integrated autocorrelation time from multiple timeseries. See Also -------- statisticalInefficiencyMultiple
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69d1f0ff680e9ac1c6a51a5a207ea28f3ed86740
https://github.com/choderalab/pymbar/blob/69d1f0ff680e9ac1c6a51a5a207ea28f3ed86740/pymbar/timeseries.py#L372-L383
train
choderalab/pymbar
pymbar/timeseries.py
subsampleCorrelatedData
def subsampleCorrelatedData(A_t, g=None, fast=False, conservative=False, verbose=False): """Determine the indices of an uncorrelated subsample of the data. Parameters ---------- A_t : np.ndarray A_t[t] is the t-th value of timeseries A(t). Length is deduced from vector. g : float, optional...
python
def subsampleCorrelatedData(A_t, g=None, fast=False, conservative=False, verbose=False): """Determine the indices of an uncorrelated subsample of the data. Parameters ---------- A_t : np.ndarray A_t[t] is the t-th value of timeseries A(t). Length is deduced from vector. g : float, optional...
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Determine the indices of an uncorrelated subsample of the data. Parameters ---------- A_t : np.ndarray A_t[t] is the t-th value of timeseries A(t). Length is deduced from vector. g : float, optional if provided, the statistical inefficiency g is used to subsample the timeseries -- othe...
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69d1f0ff680e9ac1c6a51a5a207ea28f3ed86740
https://github.com/choderalab/pymbar/blob/69d1f0ff680e9ac1c6a51a5a207ea28f3ed86740/pymbar/timeseries.py#L632-L736
train
choderalab/pymbar
pymbar/bar.py
BARzero
def BARzero(w_F, w_R, DeltaF): """A function that when zeroed is equivalent to the solution of the Bennett acceptance ratio. from http://journals.aps.org/prl/pdf/10.1103/PhysRevLett.91.140601 D_F = M + w_F - Delta F D_R = M + w_R - Delta F we want: \sum_N_F (1+exp(D_F))^-1 = \sum N_R N_R <...
python
def BARzero(w_F, w_R, DeltaF): """A function that when zeroed is equivalent to the solution of the Bennett acceptance ratio. from http://journals.aps.org/prl/pdf/10.1103/PhysRevLett.91.140601 D_F = M + w_F - Delta F D_R = M + w_R - Delta F we want: \sum_N_F (1+exp(D_F))^-1 = \sum N_R N_R <...
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A function that when zeroed is equivalent to the solution of the Bennett acceptance ratio. from http://journals.aps.org/prl/pdf/10.1103/PhysRevLett.91.140601 D_F = M + w_F - Delta F D_R = M + w_R - Delta F we want: \sum_N_F (1+exp(D_F))^-1 = \sum N_R N_R <(1+exp(-D_R))^-1> ln \sum N_F (1+e...
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69d1f0ff680e9ac1c6a51a5a207ea28f3ed86740
https://github.com/choderalab/pymbar/blob/69d1f0ff680e9ac1c6a51a5a207ea28f3ed86740/pymbar/bar.py#L54-L147
train
choderalab/pymbar
pymbar/utils.py
kln_to_kn
def kln_to_kn(kln, N_k = None, cleanup = False): """ Convert KxKxN_max array to KxN max array if self.N is not initialized, it will be here. Parameters ---------- u_kln : np.ndarray, float, shape=(KxLxN_max) N_k (optional) : np.array the N_k matrix from the previous formatting form ...
python
def kln_to_kn(kln, N_k = None, cleanup = False): """ Convert KxKxN_max array to KxN max array if self.N is not initialized, it will be here. Parameters ---------- u_kln : np.ndarray, float, shape=(KxLxN_max) N_k (optional) : np.array the N_k matrix from the previous formatting form ...
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Convert KxKxN_max array to KxN max array if self.N is not initialized, it will be here. Parameters ---------- u_kln : np.ndarray, float, shape=(KxLxN_max) N_k (optional) : np.array the N_k matrix from the previous formatting form cleanup (optional) : bool optional command to cl...
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69d1f0ff680e9ac1c6a51a5a207ea28f3ed86740
https://github.com/choderalab/pymbar/blob/69d1f0ff680e9ac1c6a51a5a207ea28f3ed86740/pymbar/utils.py#L46-L85
train
choderalab/pymbar
pymbar/utils.py
kn_to_n
def kn_to_n(kn, N_k = None, cleanup = False): """ Convert KxN_max array to N array Parameters ---------- u_kn: np.ndarray, float, shape=(KxN_max) N_k (optional) : np.array the N_k matrix from the previous formatting form cleanup (optional) : bool optional command to clean up, s...
python
def kn_to_n(kn, N_k = None, cleanup = False): """ Convert KxN_max array to N array Parameters ---------- u_kn: np.ndarray, float, shape=(KxN_max) N_k (optional) : np.array the N_k matrix from the previous formatting form cleanup (optional) : bool optional command to clean up, s...
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Convert KxN_max array to N array Parameters ---------- u_kn: np.ndarray, float, shape=(KxN_max) N_k (optional) : np.array the N_k matrix from the previous formatting form cleanup (optional) : bool optional command to clean up, since u_kln can get very large Outputs ------- ...
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69d1f0ff680e9ac1c6a51a5a207ea28f3ed86740
https://github.com/choderalab/pymbar/blob/69d1f0ff680e9ac1c6a51a5a207ea28f3ed86740/pymbar/utils.py#L88-L125
train
choderalab/pymbar
pymbar/utils.py
ensure_type
def ensure_type(val, dtype, ndim, name, length=None, can_be_none=False, shape=None, warn_on_cast=True, add_newaxis_on_deficient_ndim=False): """Typecheck the size, shape and dtype of a numpy array, with optional casting. Parameters ---------- val : {np.ndaraay, None} The arr...
python
def ensure_type(val, dtype, ndim, name, length=None, can_be_none=False, shape=None, warn_on_cast=True, add_newaxis_on_deficient_ndim=False): """Typecheck the size, shape and dtype of a numpy array, with optional casting. Parameters ---------- val : {np.ndaraay, None} The arr...
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Typecheck the size, shape and dtype of a numpy array, with optional casting. Parameters ---------- val : {np.ndaraay, None} The array to check dtype : {nd.dtype, str} The dtype you'd like the array to have ndim : int The number of dimensions you'd like the array to have ...
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69d1f0ff680e9ac1c6a51a5a207ea28f3ed86740
https://github.com/choderalab/pymbar/blob/69d1f0ff680e9ac1c6a51a5a207ea28f3ed86740/pymbar/utils.py#L128-L226
train
choderalab/pymbar
pymbar/utils.py
logsumexp
def logsumexp(a, axis=None, b=None, use_numexpr=True): """Compute the log of the sum of exponentials of input elements. Parameters ---------- a : array_like Input array. axis : None or int, optional, default=None Axis or axes over which the sum is taken. By default `axis` is None, ...
python
def logsumexp(a, axis=None, b=None, use_numexpr=True): """Compute the log of the sum of exponentials of input elements. Parameters ---------- a : array_like Input array. axis : None or int, optional, default=None Axis or axes over which the sum is taken. By default `axis` is None, ...
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Compute the log of the sum of exponentials of input elements. Parameters ---------- a : array_like Input array. axis : None or int, optional, default=None Axis or axes over which the sum is taken. By default `axis` is None, and all elements are summed. b : array-like, option...
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69d1f0ff680e9ac1c6a51a5a207ea28f3ed86740
https://github.com/choderalab/pymbar/blob/69d1f0ff680e9ac1c6a51a5a207ea28f3ed86740/pymbar/utils.py#L271-L329
train
choderalab/pymbar
pymbar/utils.py
check_w_normalized
def check_w_normalized(W, N_k, tolerance = 1.0e-4): """Check the weight matrix W is properly normalized. The sum over N should be 1, and the sum over k by N_k should aslo be 1 Parameters ---------- W : np.ndarray, shape=(N, K), dtype='float' The normalized weight matrix for snapshots and states...
python
def check_w_normalized(W, N_k, tolerance = 1.0e-4): """Check the weight matrix W is properly normalized. The sum over N should be 1, and the sum over k by N_k should aslo be 1 Parameters ---------- W : np.ndarray, shape=(N, K), dtype='float' The normalized weight matrix for snapshots and states...
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Check the weight matrix W is properly normalized. The sum over N should be 1, and the sum over k by N_k should aslo be 1 Parameters ---------- W : np.ndarray, shape=(N, K), dtype='float' The normalized weight matrix for snapshots and states. W[n, k] is the weight of snapshot n in state k. ...
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69d1f0ff680e9ac1c6a51a5a207ea28f3ed86740
https://github.com/choderalab/pymbar/blob/69d1f0ff680e9ac1c6a51a5a207ea28f3ed86740/pymbar/utils.py#L332-L371
train
phha/click_config_file
click_config_file.py
configuration_callback
def configuration_callback(cmd_name, option_name, config_file_name, saved_callback, provider, implicit, ctx, param, value): """ Callback for reading the config file. Also takes care of calling user specified custom callback afterwards. cmd_name : s...
python
def configuration_callback(cmd_name, option_name, config_file_name, saved_callback, provider, implicit, ctx, param, value): """ Callback for reading the config file. Also takes care of calling user specified custom callback afterwards. cmd_name : s...
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1c3b3ec13b41d94683bbb9467d184df6ca3b6fe1
https://github.com/phha/click_config_file/blob/1c3b3ec13b41d94683bbb9467d184df6ca3b6fe1/click_config_file.py#L51-L95
train
phha/click_config_file
click_config_file.py
configuration_option
def configuration_option(*param_decls, **attrs): """ Adds configuration file support to a click application. This will create an option of type `click.File` expecting the path to a configuration file. When specified, it overwrites the default values for all other click arguments or options with the...
python
def configuration_option(*param_decls, **attrs): """ Adds configuration file support to a click application. This will create an option of type `click.File` expecting the path to a configuration file. When specified, it overwrites the default values for all other click arguments or options with the...
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1c3b3ec13b41d94683bbb9467d184df6ca3b6fe1
https://github.com/phha/click_config_file/blob/1c3b3ec13b41d94683bbb9467d184df6ca3b6fe1/click_config_file.py#L98-L164
train
aws/aws-dynamodb-encryption-python
src/dynamodb_encryption_sdk/internal/formatting/deserialize/__init__.py
decode_value
def decode_value(stream): """Decode the contents of a value from a serialized stream. :param stream: Source data stream :type stream: io.BytesIO :returns: Decoded value :rtype: bytes """ length = decode_length(stream) (value,) = unpack_value(">{:d}s".format(length), stream) return v...
python
def decode_value(stream): """Decode the contents of a value from a serialized stream. :param stream: Source data stream :type stream: io.BytesIO :returns: Decoded value :rtype: bytes """ length = decode_length(stream) (value,) = unpack_value(">{:d}s".format(length), stream) return v...
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Decode the contents of a value from a serialized stream. :param stream: Source data stream :type stream: io.BytesIO :returns: Decoded value :rtype: bytes
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8de3bbe13df39c59b21bf431010f7acfcf629a2f
https://github.com/aws/aws-dynamodb-encryption-python/blob/8de3bbe13df39c59b21bf431010f7acfcf629a2f/src/dynamodb_encryption_sdk/internal/formatting/deserialize/__init__.py#L51-L61
train
aws/aws-dynamodb-encryption-python
src/dynamodb_encryption_sdk/internal/formatting/deserialize/__init__.py
decode_tag
def decode_tag(stream): """Decode a tag value from a serialized stream. :param stream: Source data stream :type stream: io.BytesIO :returns: Decoded tag :rtype: bytes """ (reserved, tag) = unpack_value(">cc", stream) if reserved != b"\x00": raise DeserializationError("Invalid t...
python
def decode_tag(stream): """Decode a tag value from a serialized stream. :param stream: Source data stream :type stream: io.BytesIO :returns: Decoded tag :rtype: bytes """ (reserved, tag) = unpack_value(">cc", stream) if reserved != b"\x00": raise DeserializationError("Invalid t...
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Decode a tag value from a serialized stream. :param stream: Source data stream :type stream: io.BytesIO :returns: Decoded tag :rtype: bytes
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8de3bbe13df39c59b21bf431010f7acfcf629a2f
https://github.com/aws/aws-dynamodb-encryption-python/blob/8de3bbe13df39c59b21bf431010f7acfcf629a2f/src/dynamodb_encryption_sdk/internal/formatting/deserialize/__init__.py#L76-L89
train
aws/aws-dynamodb-encryption-python
setup.py
read
def read(*args): """Reads complete file contents.""" return io.open(os.path.join(HERE, *args), encoding="utf-8").read()
python
def read(*args): """Reads complete file contents.""" return io.open(os.path.join(HERE, *args), encoding="utf-8").read()
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Reads complete file contents.
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8de3bbe13df39c59b21bf431010f7acfcf629a2f
https://github.com/aws/aws-dynamodb-encryption-python/blob/8de3bbe13df39c59b21bf431010f7acfcf629a2f/setup.py#L12-L14
train
aws/aws-dynamodb-encryption-python
src/dynamodb_encryption_sdk/internal/crypto/authentication.py
sign_item
def sign_item(encrypted_item, signing_key, crypto_config): # type: (dynamodb_types.ITEM, DelegatedKey, CryptoConfig) -> dynamodb_types.BINARY_ATTRIBUTE """Generate the signature DynamoDB atttribute. :param dict encrypted_item: Encrypted DynamoDB item :param DelegatedKey signing_key: DelegatedKey to use...
python
def sign_item(encrypted_item, signing_key, crypto_config): # type: (dynamodb_types.ITEM, DelegatedKey, CryptoConfig) -> dynamodb_types.BINARY_ATTRIBUTE """Generate the signature DynamoDB atttribute. :param dict encrypted_item: Encrypted DynamoDB item :param DelegatedKey signing_key: DelegatedKey to use...
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Generate the signature DynamoDB atttribute. :param dict encrypted_item: Encrypted DynamoDB item :param DelegatedKey signing_key: DelegatedKey to use to calculate the signature :param CryptoConfig crypto_config: Cryptographic configuration :returns: Item signature DynamoDB attribute value :rtype: di...
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8de3bbe13df39c59b21bf431010f7acfcf629a2f
https://github.com/aws/aws-dynamodb-encryption-python/blob/8de3bbe13df39c59b21bf431010f7acfcf629a2f/src/dynamodb_encryption_sdk/internal/crypto/authentication.py#L40-L58
train
aws/aws-dynamodb-encryption-python
src/dynamodb_encryption_sdk/internal/crypto/authentication.py
verify_item_signature
def verify_item_signature(signature_attribute, encrypted_item, verification_key, crypto_config): # type: (dynamodb_types.BINARY_ATTRIBUTE, dynamodb_types.ITEM, DelegatedKey, CryptoConfig) -> None """Verify the item signature. :param dict signature_attribute: Item signature DynamoDB attribute value :par...
python
def verify_item_signature(signature_attribute, encrypted_item, verification_key, crypto_config): # type: (dynamodb_types.BINARY_ATTRIBUTE, dynamodb_types.ITEM, DelegatedKey, CryptoConfig) -> None """Verify the item signature. :param dict signature_attribute: Item signature DynamoDB attribute value :par...
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Verify the item signature. :param dict signature_attribute: Item signature DynamoDB attribute value :param dict encrypted_item: Encrypted DynamoDB item :param DelegatedKey verification_key: DelegatedKey to use to calculate the signature :param CryptoConfig crypto_config: Cryptographic configuration
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8de3bbe13df39c59b21bf431010f7acfcf629a2f
https://github.com/aws/aws-dynamodb-encryption-python/blob/8de3bbe13df39c59b21bf431010f7acfcf629a2f/src/dynamodb_encryption_sdk/internal/crypto/authentication.py#L61-L79
train
aws/aws-dynamodb-encryption-python
src/dynamodb_encryption_sdk/internal/crypto/authentication.py
_string_to_sign
def _string_to_sign(item, table_name, attribute_actions): # type: (dynamodb_types.ITEM, Text, AttributeActions) -> bytes """Generate the string to sign from an encrypted item and configuration. :param dict item: Encrypted DynamoDB item :param str table_name: Table name to use when generating the string...
python
def _string_to_sign(item, table_name, attribute_actions): # type: (dynamodb_types.ITEM, Text, AttributeActions) -> bytes """Generate the string to sign from an encrypted item and configuration. :param dict item: Encrypted DynamoDB item :param str table_name: Table name to use when generating the string...
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Generate the string to sign from an encrypted item and configuration. :param dict item: Encrypted DynamoDB item :param str table_name: Table name to use when generating the string to sign :param AttributeActions attribute_actions: Actions to take for item
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8de3bbe13df39c59b21bf431010f7acfcf629a2f
https://github.com/aws/aws-dynamodb-encryption-python/blob/8de3bbe13df39c59b21bf431010f7acfcf629a2f/src/dynamodb_encryption_sdk/internal/crypto/authentication.py#L82-L106
train
aws/aws-dynamodb-encryption-python
src/dynamodb_encryption_sdk/internal/crypto/authentication.py
_hash_data
def _hash_data(hasher, data): """Generate hash of data using provided hash type. :param hasher: Hasher instance to use as a base for calculating hash :type hasher: cryptography.hazmat.primitives.hashes.Hash :param bytes data: Data to sign :returns: Hash of data :rtype: bytes """ _hasher...
python
def _hash_data(hasher, data): """Generate hash of data using provided hash type. :param hasher: Hasher instance to use as a base for calculating hash :type hasher: cryptography.hazmat.primitives.hashes.Hash :param bytes data: Data to sign :returns: Hash of data :rtype: bytes """ _hasher...
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Generate hash of data using provided hash type. :param hasher: Hasher instance to use as a base for calculating hash :type hasher: cryptography.hazmat.primitives.hashes.Hash :param bytes data: Data to sign :returns: Hash of data :rtype: bytes
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8de3bbe13df39c59b21bf431010f7acfcf629a2f
https://github.com/aws/aws-dynamodb-encryption-python/blob/8de3bbe13df39c59b21bf431010f7acfcf629a2f/src/dynamodb_encryption_sdk/internal/crypto/authentication.py#L109-L120
train
aws/aws-dynamodb-encryption-python
src/dynamodb_encryption_sdk/internal/formatting/material_description.py
serialize
def serialize(material_description): # type: (Dict[Text, Text]) -> dynamodb_types.BINARY_ATTRIBUTE """Serialize a material description dictionary into a DynamodDB attribute. :param dict material_description: Material description dictionary :returns: Serialized material description as a DynamoDB binary ...
python
def serialize(material_description): # type: (Dict[Text, Text]) -> dynamodb_types.BINARY_ATTRIBUTE """Serialize a material description dictionary into a DynamodDB attribute. :param dict material_description: Material description dictionary :returns: Serialized material description as a DynamoDB binary ...
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Serialize a material description dictionary into a DynamodDB attribute. :param dict material_description: Material description dictionary :returns: Serialized material description as a DynamoDB binary attribute value :rtype: dict :raises InvalidMaterialDescriptionError: if invalid name or value found i...
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8de3bbe13df39c59b21bf431010f7acfcf629a2f
https://github.com/aws/aws-dynamodb-encryption-python/blob/8de3bbe13df39c59b21bf431010f7acfcf629a2f/src/dynamodb_encryption_sdk/internal/formatting/material_description.py#L44-L65
train
aws/aws-dynamodb-encryption-python
src/dynamodb_encryption_sdk/internal/formatting/material_description.py
deserialize
def deserialize(serialized_material_description): # type: (dynamodb_types.BINARY_ATTRIBUTE) -> Dict[Text, Text] """Deserialize a serialized material description attribute into a material description dictionary. :param dict serialized_material_description: DynamoDB attribute value containing serialized mate...
python
def deserialize(serialized_material_description): # type: (dynamodb_types.BINARY_ATTRIBUTE) -> Dict[Text, Text] """Deserialize a serialized material description attribute into a material description dictionary. :param dict serialized_material_description: DynamoDB attribute value containing serialized mate...
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Deserialize a serialized material description attribute into a material description dictionary. :param dict serialized_material_description: DynamoDB attribute value containing serialized material description. :returns: Material description dictionary :rtype: dict :raises InvalidMaterialDescriptionErro...
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8de3bbe13df39c59b21bf431010f7acfcf629a2f
https://github.com/aws/aws-dynamodb-encryption-python/blob/8de3bbe13df39c59b21bf431010f7acfcf629a2f/src/dynamodb_encryption_sdk/internal/formatting/material_description.py#L68-L100
train
aws/aws-dynamodb-encryption-python
src/dynamodb_encryption_sdk/internal/formatting/material_description.py
_read_version
def _read_version(material_description_bytes): # type: (io.BytesIO) -> None """Read the version from the serialized material description and raise an error if it is unknown. :param material_description_bytes: serializezd material description :type material_description_bytes: io.BytesIO :raises Inva...
python
def _read_version(material_description_bytes): # type: (io.BytesIO) -> None """Read the version from the serialized material description and raise an error if it is unknown. :param material_description_bytes: serializezd material description :type material_description_bytes: io.BytesIO :raises Inva...
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Read the version from the serialized material description and raise an error if it is unknown. :param material_description_bytes: serializezd material description :type material_description_bytes: io.BytesIO :raises InvalidMaterialDescriptionError: if malformed version :raises InvalidMaterialDescriptio...
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8de3bbe13df39c59b21bf431010f7acfcf629a2f
https://github.com/aws/aws-dynamodb-encryption-python/blob/8de3bbe13df39c59b21bf431010f7acfcf629a2f/src/dynamodb_encryption_sdk/internal/formatting/material_description.py#L103-L119
train
aws/aws-dynamodb-encryption-python
src/dynamodb_encryption_sdk/encrypted/item.py
encrypt_dynamodb_item
def encrypt_dynamodb_item(item, crypto_config): # type: (dynamodb_types.ITEM, CryptoConfig) -> dynamodb_types.ITEM """Encrypt a DynamoDB item. >>> from dynamodb_encryption_sdk.encrypted.item import encrypt_dynamodb_item >>> plaintext_item = { ... 'some': {'S': 'data'}, ... 'more': {'N':...
python
def encrypt_dynamodb_item(item, crypto_config): # type: (dynamodb_types.ITEM, CryptoConfig) -> dynamodb_types.ITEM """Encrypt a DynamoDB item. >>> from dynamodb_encryption_sdk.encrypted.item import encrypt_dynamodb_item >>> plaintext_item = { ... 'some': {'S': 'data'}, ... 'more': {'N':...
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Encrypt a DynamoDB item. >>> from dynamodb_encryption_sdk.encrypted.item import encrypt_dynamodb_item >>> plaintext_item = { ... 'some': {'S': 'data'}, ... 'more': {'N': '5'} ... } >>> encrypted_item = encrypt_dynamodb_item( ... item=plaintext_item, ... crypto_config=my_...
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8de3bbe13df39c59b21bf431010f7acfcf629a2f
https://github.com/aws/aws-dynamodb-encryption-python/blob/8de3bbe13df39c59b21bf431010f7acfcf629a2f/src/dynamodb_encryption_sdk/encrypted/item.py#L40-L119
train
aws/aws-dynamodb-encryption-python
src/dynamodb_encryption_sdk/encrypted/item.py
encrypt_python_item
def encrypt_python_item(item, crypto_config): # type: (dynamodb_types.ITEM, CryptoConfig) -> dynamodb_types.ITEM """Encrypt a dictionary for DynamoDB. >>> from dynamodb_encryption_sdk.encrypted.item import encrypt_python_item >>> plaintext_item = { ... 'some': 'data', ... 'more': 5 ...
python
def encrypt_python_item(item, crypto_config): # type: (dynamodb_types.ITEM, CryptoConfig) -> dynamodb_types.ITEM """Encrypt a dictionary for DynamoDB. >>> from dynamodb_encryption_sdk.encrypted.item import encrypt_python_item >>> plaintext_item = { ... 'some': 'data', ... 'more': 5 ...
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Encrypt a dictionary for DynamoDB. >>> from dynamodb_encryption_sdk.encrypted.item import encrypt_python_item >>> plaintext_item = { ... 'some': 'data', ... 'more': 5 ... } >>> encrypted_item = encrypt_python_item( ... item=plaintext_item, ... crypto_config=my_crypto_con...
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8de3bbe13df39c59b21bf431010f7acfcf629a2f
https://github.com/aws/aws-dynamodb-encryption-python/blob/8de3bbe13df39c59b21bf431010f7acfcf629a2f/src/dynamodb_encryption_sdk/encrypted/item.py#L122-L147
train
aws/aws-dynamodb-encryption-python
src/dynamodb_encryption_sdk/encrypted/item.py
decrypt_dynamodb_item
def decrypt_dynamodb_item(item, crypto_config): # type: (dynamodb_types.ITEM, CryptoConfig) -> dynamodb_types.ITEM """Decrypt a DynamoDB item. >>> from dynamodb_encryption_sdk.encrypted.item import decrypt_python_item >>> encrypted_item = { ... 'some': {'B': b'ENCRYPTED_DATA'}, ... 'mor...
python
def decrypt_dynamodb_item(item, crypto_config): # type: (dynamodb_types.ITEM, CryptoConfig) -> dynamodb_types.ITEM """Decrypt a DynamoDB item. >>> from dynamodb_encryption_sdk.encrypted.item import decrypt_python_item >>> encrypted_item = { ... 'some': {'B': b'ENCRYPTED_DATA'}, ... 'mor...
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Decrypt a DynamoDB item. >>> from dynamodb_encryption_sdk.encrypted.item import decrypt_python_item >>> encrypted_item = { ... 'some': {'B': b'ENCRYPTED_DATA'}, ... 'more': {'B': b'ENCRYPTED_DATA'} ... } >>> decrypted_item = decrypt_python_item( ... item=encrypted_item, ... ...
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8de3bbe13df39c59b21bf431010f7acfcf629a2f
https://github.com/aws/aws-dynamodb-encryption-python/blob/8de3bbe13df39c59b21bf431010f7acfcf629a2f/src/dynamodb_encryption_sdk/encrypted/item.py#L150-L228
train
aws/aws-dynamodb-encryption-python
src/dynamodb_encryption_sdk/encrypted/item.py
decrypt_python_item
def decrypt_python_item(item, crypto_config): # type: (dynamodb_types.ITEM, CryptoConfig) -> dynamodb_types.ITEM """Decrypt a dictionary for DynamoDB. >>> from dynamodb_encryption_sdk.encrypted.item import decrypt_python_item >>> encrypted_item = { ... 'some': Binary(b'ENCRYPTED_DATA'), ......
python
def decrypt_python_item(item, crypto_config): # type: (dynamodb_types.ITEM, CryptoConfig) -> dynamodb_types.ITEM """Decrypt a dictionary for DynamoDB. >>> from dynamodb_encryption_sdk.encrypted.item import decrypt_python_item >>> encrypted_item = { ... 'some': Binary(b'ENCRYPTED_DATA'), ......
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Decrypt a dictionary for DynamoDB. >>> from dynamodb_encryption_sdk.encrypted.item import decrypt_python_item >>> encrypted_item = { ... 'some': Binary(b'ENCRYPTED_DATA'), ... 'more': Binary(b'ENCRYPTED_DATA') ... } >>> decrypted_item = decrypt_python_item( ... item=encrypted_it...
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8de3bbe13df39c59b21bf431010f7acfcf629a2f
https://github.com/aws/aws-dynamodb-encryption-python/blob/8de3bbe13df39c59b21bf431010f7acfcf629a2f/src/dynamodb_encryption_sdk/encrypted/item.py#L231-L256
train
aws/aws-dynamodb-encryption-python
src/dynamodb_encryption_sdk/transform.py
dict_to_ddb
def dict_to_ddb(item): # type: (Dict[str, Any]) -> Dict[str, Any] # TODO: narrow these types down """Converts a native Python dictionary to a raw DynamoDB item. :param dict item: Native item :returns: DynamoDB item :rtype: dict """ serializer = TypeSerializer() return {key: serializ...
python
def dict_to_ddb(item): # type: (Dict[str, Any]) -> Dict[str, Any] # TODO: narrow these types down """Converts a native Python dictionary to a raw DynamoDB item. :param dict item: Native item :returns: DynamoDB item :rtype: dict """ serializer = TypeSerializer() return {key: serializ...
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Converts a native Python dictionary to a raw DynamoDB item. :param dict item: Native item :returns: DynamoDB item :rtype: dict
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8de3bbe13df39c59b21bf431010f7acfcf629a2f
https://github.com/aws/aws-dynamodb-encryption-python/blob/8de3bbe13df39c59b21bf431010f7acfcf629a2f/src/dynamodb_encryption_sdk/transform.py#L25-L35
train
aws/aws-dynamodb-encryption-python
src/dynamodb_encryption_sdk/transform.py
ddb_to_dict
def ddb_to_dict(item): # type: (Dict[str, Any]) -> Dict[str, Any] # TODO: narrow these types down """Converts a raw DynamoDB item to a native Python dictionary. :param dict item: DynamoDB item :returns: Native item :rtype: dict """ deserializer = TypeDeserializer() return {key: dese...
python
def ddb_to_dict(item): # type: (Dict[str, Any]) -> Dict[str, Any] # TODO: narrow these types down """Converts a raw DynamoDB item to a native Python dictionary. :param dict item: DynamoDB item :returns: Native item :rtype: dict """ deserializer = TypeDeserializer() return {key: dese...
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Converts a raw DynamoDB item to a native Python dictionary. :param dict item: DynamoDB item :returns: Native item :rtype: dict
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8de3bbe13df39c59b21bf431010f7acfcf629a2f
https://github.com/aws/aws-dynamodb-encryption-python/blob/8de3bbe13df39c59b21bf431010f7acfcf629a2f/src/dynamodb_encryption_sdk/transform.py#L38-L48
train
aws/aws-dynamodb-encryption-python
src/dynamodb_encryption_sdk/internal/validators.py
dictionary_validator
def dictionary_validator(key_type, value_type): """Validator for ``attrs`` that performs deep type checking of dictionaries.""" def _validate_dictionary(instance, attribute, value): # pylint: disable=unused-argument """Validate that a dictionary is structured as expected. :raises TypeE...
python
def dictionary_validator(key_type, value_type): """Validator for ``attrs`` that performs deep type checking of dictionaries.""" def _validate_dictionary(instance, attribute, value): # pylint: disable=unused-argument """Validate that a dictionary is structured as expected. :raises TypeE...
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Validator for ``attrs`` that performs deep type checking of dictionaries.
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8de3bbe13df39c59b21bf431010f7acfcf629a2f
https://github.com/aws/aws-dynamodb-encryption-python/blob/8de3bbe13df39c59b21bf431010f7acfcf629a2f/src/dynamodb_encryption_sdk/internal/validators.py#L23-L48
train
aws/aws-dynamodb-encryption-python
src/dynamodb_encryption_sdk/internal/validators.py
iterable_validator
def iterable_validator(iterable_type, member_type): """Validator for ``attrs`` that performs deep type checking of iterables.""" def _validate_tuple(instance, attribute, value): # pylint: disable=unused-argument """Validate that a dictionary is structured as expected. :raises TypeError...
python
def iterable_validator(iterable_type, member_type): """Validator for ``attrs`` that performs deep type checking of iterables.""" def _validate_tuple(instance, attribute, value): # pylint: disable=unused-argument """Validate that a dictionary is structured as expected. :raises TypeError...
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Validator for ``attrs`` that performs deep type checking of iterables.
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8de3bbe13df39c59b21bf431010f7acfcf629a2f
https://github.com/aws/aws-dynamodb-encryption-python/blob/8de3bbe13df39c59b21bf431010f7acfcf629a2f/src/dynamodb_encryption_sdk/internal/validators.py#L51-L70
train
aws/aws-dynamodb-encryption-python
src/dynamodb_encryption_sdk/internal/validators.py
callable_validator
def callable_validator(instance, attribute, value): # pylint: disable=unused-argument """Validate that an attribute value is callable. :raises TypeError: if ``value`` is not callable """ if not callable(value): raise TypeError('"{name}" value "{value}" must be callable'.format(name=attribut...
python
def callable_validator(instance, attribute, value): # pylint: disable=unused-argument """Validate that an attribute value is callable. :raises TypeError: if ``value`` is not callable """ if not callable(value): raise TypeError('"{name}" value "{value}" must be callable'.format(name=attribut...
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Validate that an attribute value is callable. :raises TypeError: if ``value`` is not callable
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8de3bbe13df39c59b21bf431010f7acfcf629a2f
https://github.com/aws/aws-dynamodb-encryption-python/blob/8de3bbe13df39c59b21bf431010f7acfcf629a2f/src/dynamodb_encryption_sdk/internal/validators.py#L73-L80
train
aws/aws-dynamodb-encryption-python
src/dynamodb_encryption_sdk/internal/crypto/encryption.py
encrypt_attribute
def encrypt_attribute(attribute_name, attribute, encryption_key, algorithm): # type: (Text, dynamodb_types.RAW_ATTRIBUTE, DelegatedKey, Text) -> dynamodb_types.BINARY_ATTRIBUTE """Encrypt a single DynamoDB attribute. :param str attribute_name: DynamoDB attribute name :param dict attribute: Plaintext Dy...
python
def encrypt_attribute(attribute_name, attribute, encryption_key, algorithm): # type: (Text, dynamodb_types.RAW_ATTRIBUTE, DelegatedKey, Text) -> dynamodb_types.BINARY_ATTRIBUTE """Encrypt a single DynamoDB attribute. :param str attribute_name: DynamoDB attribute name :param dict attribute: Plaintext Dy...
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Encrypt a single DynamoDB attribute. :param str attribute_name: DynamoDB attribute name :param dict attribute: Plaintext DynamoDB attribute :param DelegatedKey encryption_key: DelegatedKey to use to encrypt the attribute :param str algorithm: Encryption algorithm descriptor (passed to encryption_key as...
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8de3bbe13df39c59b21bf431010f7acfcf629a2f
https://github.com/aws/aws-dynamodb-encryption-python/blob/8de3bbe13df39c59b21bf431010f7acfcf629a2f/src/dynamodb_encryption_sdk/internal/crypto/encryption.py#L34-L49
train
aws/aws-dynamodb-encryption-python
src/dynamodb_encryption_sdk/internal/crypto/encryption.py
decrypt_attribute
def decrypt_attribute(attribute_name, attribute, decryption_key, algorithm): # type: (Text, dynamodb_types.RAW_ATTRIBUTE, DelegatedKey, Text) -> dynamodb_types.RAW_ATTRIBUTE """Decrypt a single DynamoDB attribute. :param str attribute_name: DynamoDB attribute name :param dict attribute: Encrypted Dynam...
python
def decrypt_attribute(attribute_name, attribute, decryption_key, algorithm): # type: (Text, dynamodb_types.RAW_ATTRIBUTE, DelegatedKey, Text) -> dynamodb_types.RAW_ATTRIBUTE """Decrypt a single DynamoDB attribute. :param str attribute_name: DynamoDB attribute name :param dict attribute: Encrypted Dynam...
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Decrypt a single DynamoDB attribute. :param str attribute_name: DynamoDB attribute name :param dict attribute: Encrypted DynamoDB attribute :param DelegatedKey encryption_key: DelegatedKey to use to encrypt the attribute :param str algorithm: Decryption algorithm descriptor (passed to encryption_key as...
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8de3bbe13df39c59b21bf431010f7acfcf629a2f
https://github.com/aws/aws-dynamodb-encryption-python/blob/8de3bbe13df39c59b21bf431010f7acfcf629a2f/src/dynamodb_encryption_sdk/internal/crypto/encryption.py#L52-L67
train
aws/aws-dynamodb-encryption-python
src/dynamodb_encryption_sdk/delegated_keys/jce.py
_generate_rsa_key
def _generate_rsa_key(key_length): """Generate a new RSA private key. :param int key_length: Required key length in bits :returns: DER-encoded private key, private key identifier, and DER encoding identifier :rtype: tuple(bytes, :class:`EncryptionKeyType`, :class:`KeyEncodingType`) """ private_...
python
def _generate_rsa_key(key_length): """Generate a new RSA private key. :param int key_length: Required key length in bits :returns: DER-encoded private key, private key identifier, and DER encoding identifier :rtype: tuple(bytes, :class:`EncryptionKeyType`, :class:`KeyEncodingType`) """ private_...
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Generate a new RSA private key. :param int key_length: Required key length in bits :returns: DER-encoded private key, private key identifier, and DER encoding identifier :rtype: tuple(bytes, :class:`EncryptionKeyType`, :class:`KeyEncodingType`)
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8de3bbe13df39c59b21bf431010f7acfcf629a2f
https://github.com/aws/aws-dynamodb-encryption-python/blob/8de3bbe13df39c59b21bf431010f7acfcf629a2f/src/dynamodb_encryption_sdk/delegated_keys/jce.py#L52-L65
train
aws/aws-dynamodb-encryption-python
src/dynamodb_encryption_sdk/internal/formatting/serialize/__init__.py
encode_value
def encode_value(value): # type: (bytes) -> bytes """Encodes the value in Length-Value format. :param value: Value to encode :type value: six.string_types or :class:`boto3.dynamodb_encryption_sdk.types.Binary` :returns: Length-Value encoded value :rtype: bytes """ return struct.pack(">I...
python
def encode_value(value): # type: (bytes) -> bytes """Encodes the value in Length-Value format. :param value: Value to encode :type value: six.string_types or :class:`boto3.dynamodb_encryption_sdk.types.Binary` :returns: Length-Value encoded value :rtype: bytes """ return struct.pack(">I...
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Encodes the value in Length-Value format. :param value: Value to encode :type value: six.string_types or :class:`boto3.dynamodb_encryption_sdk.types.Binary` :returns: Length-Value encoded value :rtype: bytes
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8de3bbe13df39c59b21bf431010f7acfcf629a2f
https://github.com/aws/aws-dynamodb-encryption-python/blob/8de3bbe13df39c59b21bf431010f7acfcf629a2f/src/dynamodb_encryption_sdk/internal/formatting/serialize/__init__.py#L41-L50
train
aws/aws-dynamodb-encryption-python
examples/src/aws_kms_encrypted_client.py
encrypt_item
def encrypt_item(table_name, aws_cmk_id): """Demonstrate use of EncryptedClient to transparently encrypt an item.""" index_key = {"partition_attribute": {"S": "is this"}, "sort_attribute": {"N": "55"}} plaintext_item = { "example": {"S": "data"}, "some numbers": {"N": "99"}, "and som...
python
def encrypt_item(table_name, aws_cmk_id): """Demonstrate use of EncryptedClient to transparently encrypt an item.""" index_key = {"partition_attribute": {"S": "is this"}, "sort_attribute": {"N": "55"}} plaintext_item = { "example": {"S": "data"}, "some numbers": {"N": "99"}, "and som...
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Demonstrate use of EncryptedClient to transparently encrypt an item.
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8de3bbe13df39c59b21bf431010f7acfcf629a2f
https://github.com/aws/aws-dynamodb-encryption-python/blob/8de3bbe13df39c59b21bf431010f7acfcf629a2f/examples/src/aws_kms_encrypted_client.py#L22-L70
train
aws/aws-dynamodb-encryption-python
examples/src/aws_kms_encrypted_client.py
encrypt_batch_items
def encrypt_batch_items(table_name, aws_cmk_id): """Demonstrate use of EncryptedClient to transparently encrypt multiple items in a batch request.""" index_keys = [ {"partition_attribute": {"S": "is this"}, "sort_attribute": {"N": "55"}}, {"partition_attribute": {"S": "is this"}, "sort_attribute...
python
def encrypt_batch_items(table_name, aws_cmk_id): """Demonstrate use of EncryptedClient to transparently encrypt multiple items in a batch request.""" index_keys = [ {"partition_attribute": {"S": "is this"}, "sort_attribute": {"N": "55"}}, {"partition_attribute": {"S": "is this"}, "sort_attribute...
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Demonstrate use of EncryptedClient to transparently encrypt multiple items in a batch request.
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8de3bbe13df39c59b21bf431010f7acfcf629a2f
https://github.com/aws/aws-dynamodb-encryption-python/blob/8de3bbe13df39c59b21bf431010f7acfcf629a2f/examples/src/aws_kms_encrypted_client.py#L73-L157
train
aws/aws-dynamodb-encryption-python
src/dynamodb_encryption_sdk/internal/crypto/jce_bridge/primitives.py
load_rsa_key
def load_rsa_key(key, key_type, key_encoding): # (bytes, EncryptionKeyType, KeyEncodingType) -> Any # TODO: narrow down the output type """Load an RSA key object from the provided raw key bytes. :param bytes key: Raw key bytes to load :param EncryptionKeyType key_type: Type of key to load :para...
python
def load_rsa_key(key, key_type, key_encoding): # (bytes, EncryptionKeyType, KeyEncodingType) -> Any # TODO: narrow down the output type """Load an RSA key object from the provided raw key bytes. :param bytes key: Raw key bytes to load :param EncryptionKeyType key_type: Type of key to load :para...
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Load an RSA key object from the provided raw key bytes. :param bytes key: Raw key bytes to load :param EncryptionKeyType key_type: Type of key to load :param KeyEncodingType key_encoding: Encoding used to serialize ``key`` :returns: Loaded key :rtype: TODO: :raises ValueError: if ``key_type`` a...
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8de3bbe13df39c59b21bf431010f7acfcf629a2f
https://github.com/aws/aws-dynamodb-encryption-python/blob/8de3bbe13df39c59b21bf431010f7acfcf629a2f/src/dynamodb_encryption_sdk/internal/crypto/jce_bridge/primitives.py#L434-L460
train
aws/aws-dynamodb-encryption-python
src/dynamodb_encryption_sdk/internal/crypto/jce_bridge/primitives.py
JavaSymmetricEncryptionAlgorithm._disable_encryption
def _disable_encryption(self): # () -> None """Enable encryption methods for ciphers that support them.""" self.encrypt = self._disabled_encrypt self.decrypt = self._disabled_decrypt
python
def _disable_encryption(self): # () -> None """Enable encryption methods for ciphers that support them.""" self.encrypt = self._disabled_encrypt self.decrypt = self._disabled_decrypt
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Enable encryption methods for ciphers that support them.
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8de3bbe13df39c59b21bf431010f7acfcf629a2f
https://github.com/aws/aws-dynamodb-encryption-python/blob/8de3bbe13df39c59b21bf431010f7acfcf629a2f/src/dynamodb_encryption_sdk/internal/crypto/jce_bridge/primitives.py#L296-L300
train
aws/aws-dynamodb-encryption-python
src/dynamodb_encryption_sdk/internal/crypto/jce_bridge/primitives.py
JavaSymmetricEncryptionAlgorithm.wrap
def wrap(self, wrapping_key, key_to_wrap): # type: (bytes, bytes) -> bytes """Wrap key using AES keywrap. :param bytes wrapping_key: Loaded key with which to wrap :param bytes key_to_wrap: Raw key to wrap :returns: Wrapped key :rtype: bytes """ if self.ja...
python
def wrap(self, wrapping_key, key_to_wrap): # type: (bytes, bytes) -> bytes """Wrap key using AES keywrap. :param bytes wrapping_key: Loaded key with which to wrap :param bytes key_to_wrap: Raw key to wrap :returns: Wrapped key :rtype: bytes """ if self.ja...
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Wrap key using AES keywrap. :param bytes wrapping_key: Loaded key with which to wrap :param bytes key_to_wrap: Raw key to wrap :returns: Wrapped key :rtype: bytes
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8de3bbe13df39c59b21bf431010f7acfcf629a2f
https://github.com/aws/aws-dynamodb-encryption-python/blob/8de3bbe13df39c59b21bf431010f7acfcf629a2f/src/dynamodb_encryption_sdk/internal/crypto/jce_bridge/primitives.py#L330-L347
train
aws/aws-dynamodb-encryption-python
src/dynamodb_encryption_sdk/internal/crypto/jce_bridge/primitives.py
JavaSymmetricEncryptionAlgorithm.unwrap
def unwrap(self, wrapping_key, wrapped_key): # type: (bytes, bytes) -> bytes """Unwrap key using AES keywrap. :param bytes wrapping_key: Loaded key with which to unwrap :param bytes wrapped_key: Wrapped key to unwrap :returns: Unwrapped key :rtype: bytes """ ...
python
def unwrap(self, wrapping_key, wrapped_key): # type: (bytes, bytes) -> bytes """Unwrap key using AES keywrap. :param bytes wrapping_key: Loaded key with which to unwrap :param bytes wrapped_key: Wrapped key to unwrap :returns: Unwrapped key :rtype: bytes """ ...
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Unwrap key using AES keywrap. :param bytes wrapping_key: Loaded key with which to unwrap :param bytes wrapped_key: Wrapped key to unwrap :returns: Unwrapped key :rtype: bytes
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8de3bbe13df39c59b21bf431010f7acfcf629a2f
https://github.com/aws/aws-dynamodb-encryption-python/blob/8de3bbe13df39c59b21bf431010f7acfcf629a2f/src/dynamodb_encryption_sdk/internal/crypto/jce_bridge/primitives.py#L349-L366
train
aws/aws-dynamodb-encryption-python
src/dynamodb_encryption_sdk/structures.py
_validate_attribute_values_are_ddb_items
def _validate_attribute_values_are_ddb_items(instance, attribute, value): # pylint: disable=unused-argument """Validate that dictionary values in ``value`` match the structure of DynamoDB JSON items. .. note:: We are not trying to validate the full structure of the item with this validator. ...
python
def _validate_attribute_values_are_ddb_items(instance, attribute, value): # pylint: disable=unused-argument """Validate that dictionary values in ``value`` match the structure of DynamoDB JSON items. .. note:: We are not trying to validate the full structure of the item with this validator. ...
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Validate that dictionary values in ``value`` match the structure of DynamoDB JSON items. .. note:: We are not trying to validate the full structure of the item with this validator. This is just meant to verify that the values roughly match the correct format.
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8de3bbe13df39c59b21bf431010f7acfcf629a2f
https://github.com/aws/aws-dynamodb-encryption-python/blob/8de3bbe13df39c59b21bf431010f7acfcf629a2f/src/dynamodb_encryption_sdk/structures.py#L35-L46
train
aws/aws-dynamodb-encryption-python
src/dynamodb_encryption_sdk/internal/utils.py
validate_get_arguments
def validate_get_arguments(kwargs): # type: (Dict[Text, Any]) -> None """Verify that attribute filtering parameters are not found in the request. :raises InvalidArgumentError: if banned parameters are found """ for arg in ("AttributesToGet", "ProjectionExpression"): if arg in kwargs: ...
python
def validate_get_arguments(kwargs): # type: (Dict[Text, Any]) -> None """Verify that attribute filtering parameters are not found in the request. :raises InvalidArgumentError: if banned parameters are found """ for arg in ("AttributesToGet", "ProjectionExpression"): if arg in kwargs: ...
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Verify that attribute filtering parameters are not found in the request. :raises InvalidArgumentError: if banned parameters are found
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8de3bbe13df39c59b21bf431010f7acfcf629a2f
https://github.com/aws/aws-dynamodb-encryption-python/blob/8de3bbe13df39c59b21bf431010f7acfcf629a2f/src/dynamodb_encryption_sdk/internal/utils.py#L97-L108
train
aws/aws-dynamodb-encryption-python
src/dynamodb_encryption_sdk/internal/utils.py
crypto_config_from_kwargs
def crypto_config_from_kwargs(fallback, **kwargs): """Pull all encryption-specific parameters from the request and use them to build a crypto config. :returns: crypto config and updated kwargs :rtype: dynamodb_encryption_sdk.encrypted.CryptoConfig and dict """ try: crypto_config = kwargs.po...
python
def crypto_config_from_kwargs(fallback, **kwargs): """Pull all encryption-specific parameters from the request and use them to build a crypto config. :returns: crypto config and updated kwargs :rtype: dynamodb_encryption_sdk.encrypted.CryptoConfig and dict """ try: crypto_config = kwargs.po...
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Pull all encryption-specific parameters from the request and use them to build a crypto config. :returns: crypto config and updated kwargs :rtype: dynamodb_encryption_sdk.encrypted.CryptoConfig and dict
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8de3bbe13df39c59b21bf431010f7acfcf629a2f
https://github.com/aws/aws-dynamodb-encryption-python/blob/8de3bbe13df39c59b21bf431010f7acfcf629a2f/src/dynamodb_encryption_sdk/internal/utils.py#L111-L125
train
aws/aws-dynamodb-encryption-python
src/dynamodb_encryption_sdk/internal/utils.py
crypto_config_from_table_info
def crypto_config_from_table_info(materials_provider, attribute_actions, table_info): """Build a crypto config from the provided values and table info. :returns: crypto config and updated kwargs :rtype: tuple(CryptoConfig, dict) """ ec_kwargs = table_info.encryption_context_values if table_info...
python
def crypto_config_from_table_info(materials_provider, attribute_actions, table_info): """Build a crypto config from the provided values and table info. :returns: crypto config and updated kwargs :rtype: tuple(CryptoConfig, dict) """ ec_kwargs = table_info.encryption_context_values if table_info...
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Build a crypto config from the provided values and table info. :returns: crypto config and updated kwargs :rtype: tuple(CryptoConfig, dict)
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8de3bbe13df39c59b21bf431010f7acfcf629a2f
https://github.com/aws/aws-dynamodb-encryption-python/blob/8de3bbe13df39c59b21bf431010f7acfcf629a2f/src/dynamodb_encryption_sdk/internal/utils.py#L128-L144
train
aws/aws-dynamodb-encryption-python
src/dynamodb_encryption_sdk/internal/utils.py
crypto_config_from_cache
def crypto_config_from_cache(materials_provider, attribute_actions, table_info_cache, table_name): """Build a crypto config from the provided values, loading the table info from the provided cache. :returns: crypto config and updated kwargs :rtype: tuple(CryptoConfig, dict) """ table_info = table_i...
python
def crypto_config_from_cache(materials_provider, attribute_actions, table_info_cache, table_name): """Build a crypto config from the provided values, loading the table info from the provided cache. :returns: crypto config and updated kwargs :rtype: tuple(CryptoConfig, dict) """ table_info = table_i...
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Build a crypto config from the provided values, loading the table info from the provided cache. :returns: crypto config and updated kwargs :rtype: tuple(CryptoConfig, dict)
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8de3bbe13df39c59b21bf431010f7acfcf629a2f
https://github.com/aws/aws-dynamodb-encryption-python/blob/8de3bbe13df39c59b21bf431010f7acfcf629a2f/src/dynamodb_encryption_sdk/internal/utils.py#L147-L158
train
aws/aws-dynamodb-encryption-python
src/dynamodb_encryption_sdk/internal/utils.py
decrypt_multi_get
def decrypt_multi_get(decrypt_method, crypto_config_method, read_method, **kwargs): # type: (Callable, Callable, Callable, **Any) -> Dict # TODO: narrow this down """Transparently decrypt multiple items after getting them from the table with a scan or query method. :param callable decrypt_method: Metho...
python
def decrypt_multi_get(decrypt_method, crypto_config_method, read_method, **kwargs): # type: (Callable, Callable, Callable, **Any) -> Dict # TODO: narrow this down """Transparently decrypt multiple items after getting them from the table with a scan or query method. :param callable decrypt_method: Metho...
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Transparently decrypt multiple items after getting them from the table with a scan or query method. :param callable decrypt_method: Method to use to decrypt items :param callable crypto_config_method: Method that accepts ``kwargs`` and provides a :class:`CryptoConfig` :param callable read_method: Method th...
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8de3bbe13df39c59b21bf431010f7acfcf629a2f
https://github.com/aws/aws-dynamodb-encryption-python/blob/8de3bbe13df39c59b21bf431010f7acfcf629a2f/src/dynamodb_encryption_sdk/internal/utils.py#L174-L194
train