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For every Source-1 record, retrieve plausible Source-2/Source-3 records of the SAME country
(matches never cross country) as the union of several sparse top-K cosine retrievals:
name char 3-gram TF-IDF on the spaceless name top k_name (S1 -> pool)
nameaddr char 3-gram TF-IDF on name + ' ' + address top k_nameaddr (S1 -> pool)
addr char 3-gram TF-IDF on address (empty -> skipped) top k_addr (S1 -> pool)
word word 1+2-gram TF-IDF on name + ' ' + address top k_word (S1 -> pool)
reverse nameaddr, pool -> S1 top reverse_k per pool record
The union is needed because 14% of true pairs share no name token and 4% share no address
token (never both), see docs/dataset_findings.md.
TF-IDF: hashed features (sklearn HashingVectorizer, parallel), idf fit on S1 u pool of the
country (smooth idf), sublinear tf, features with df > max_df * n dropped before the l2 norm,
features present on only one side dropped after the norm (they cannot contribute to a dot
product), float32 throughout.
Top-K backends:
sdt sparse_dot_topn.sp_matmul_topn with OpenMP threads, over row blocks of the query matrix.
scipy fallback: chunked Q_chunk @ T.T with scipy, per-row top-K by argpartition, chunks sized
by an estimate of multiply-adds so each worker's product stays bounded; forked worker
processes share the target matrix copy-on-write.
Output parquet columns: s1_id, cand_id, country, src, sim_name, sim_nameaddr, sim_addr,
sim_word, f_name, f_nameaddr, f_addr, f_word, from_reverse, rank_name, rank_nameaddr,
rank_addr, rank_word, rank_rev [, is_match when --gt].
f_* / from_reverse say which retrieval produced the pair; rank_* is the 0-based rank of the
candidate in the S1 record's top-K list (rank_rev: rank of the S1 record in the pool record's
reverse list), null when not retrieved. With --fill-sims (default) every
sim_* column holds the exact cosine for every pair under that representation (so all four are
usable as features); with --no-fill-sims sim_* is the retrieval cosine and null when that
strategy did not retrieve the pair.
Pre-normalised input: --norm-dir DIR [--split train|test] reads DIR/{s1,s2,s3}.parquet
(or t1,t2,t3) written by scripts/preprocess_normalize.py; name = name_translit (fallback
name_core), address = ' '.join(addr_tokens_translit), spaceless name = name without spaces.
Note that table's country values are lowercased ('us', 'india'); they are used as-is.
Normaliser hook (TSV input only): --normalizer pkg.module:function. The function receives a polars DataFrame
with columns entity_id, business_name, business_address, country and must return it with
string columns name_n and addr_n added (name_ns, the spaceless name, is derived if absent).
Example:
python -m src.blocking --s1 train_source1.tsv --s2 train_source2.tsv --s3 train_source3.tsv \
--gt train_ground_truth.tsv --out cands.parquet --max-s1 200000 --workers 30
"""
from __future__ import annotations
import argparse
import gc
import importlib
import json
import math
import multiprocessing as mp
import os
import sys
import time
import warnings
from concurrent.futures import ProcessPoolExecutor
from contextlib import contextmanager
import numpy as np
import polars as pl
import scipy.sparse as sp
from sklearn.feature_extraction.text import HashingVectorizer # import before any fork
try: # import before any fork as well (native OpenMP runtime)
import sparse_dot_topn as _sdt
except ImportError:
_sdt = None
warnings.filterwarnings("ignore", message=r".*fork.*") # polars' at-fork warning; workers never call polars
warnings.filterwarnings("ignore", message=r".*empty_as_null.*")
STRATS = ("name", "nameaddr", "addr", "word")
SIM_COLS = [f"sim_{s}" for s in STRATS]
FLAG_COLS = [f"f_{s}" for s in STRATS] + ["from_reverse"]
RANK_COLS = [f"rank_{s}" for s in STRATS] + ["rank_rev"]
NO_RANK = np.int16(32767)
REV_CAPS = (0, 5, 10, 20, 40) # reverse-only pairs kept per S1 in the sweep (plus 'all')
K_FRACS = (0.25, 0.5, 0.75, 1.0) # forward K scaling in the sweep
SRC_COLS = ["entity_id", "business_name", "business_address", "country"]
# --------------------------------------------------------------------------------------------
# logging, timing, memory
# --------------------------------------------------------------------------------------------
_T0 = time.time()
TIMINGS: dict[str, float] = {}
def _mem_info():
rss = avail = None
try:
import psutil
rss = psutil.Process().memory_info().rss
avail = psutil.virtual_memory().available
except Exception:
try:
with open("/proc/self/statm") as f:
rss = int(f.read().split()[1]) * os.sysconf("SC_PAGE_SIZE")
with open("/proc/meminfo") as f:
for line in f:
if line.startswith("MemAvailable:"):
avail = int(line.split()[1]) * 1024
except Exception:
pass
return rss, avail
def _peak_gb():
import resource
scale = 1 if sys.platform == "darwin" else 1024 # ru_maxrss: bytes on macOS, KiB on Linux
own = resource.getrusage(resource.RUSAGE_SELF).ru_maxrss * scale / 1e9
kids = resource.getrusage(resource.RUSAGE_CHILDREN).ru_maxrss * scale / 1e9
return own, kids
def log(msg: str) -> None:
rss, avail = _mem_info()
parts = [f"{time.time() - _T0:8.1f}s"]
if rss is not None:
parts.append(f"rss={rss / 1e9:6.2f}GB")
if avail is not None:
parts.append(f"avail={avail / 1e9:6.1f}GB")
print(f"[{' '.join(parts)}] {msg}", flush=True)
@contextmanager
def stage(name: str):
t = time.time()
log(f">> {name}")
try:
yield
finally:
dt = time.time() - t
TIMINGS[name] = TIMINGS.get(name, 0.0) + dt
log(f"<< {name} ({dt:.1f}s)")
# --------------------------------------------------------------------------------------------
# loading and normalisation
# --------------------------------------------------------------------------------------------
def read_tsv(path: str, columns: list[str] | None = None) -> pl.DataFrame:
"""Read a challenge TSV with every column as string, no quoting, empty -> ''."""
kw = dict(separator="\t", quote_char=None, infer_schema_length=0, truncate_ragged_lines=True,
encoding="utf8-lossy", columns=columns)
with warnings.catch_warnings():
warnings.simplefilter("ignore", DeprecationWarning)
df = pl.read_csv(path, **kw)
return df.with_columns(pl.all().fill_null(""))
def read_source(path: str) -> pl.DataFrame:
df = read_tsv(path)
missing = [c for c in SRC_COLS if c not in df.columns]
if missing:
raise ValueError(f"{path}: missing columns {missing}; got {df.columns}")
return df.select(
pl.col("entity_id").str.strip_chars(),
pl.col("business_name"),
pl.col("business_address"),
pl.col("country").str.strip_chars(),
)
def _nfkd(e: pl.Expr) -> pl.Expr:
if hasattr(pl.col("x").str, "normalize"):
return e.str.normalize("NFKD")
import pyarrow.compute as pc # older polars: do it in arrow
return e.map_batches(lambda s: pl.from_arrow(pc.utf8_normalize(s.to_arrow(), "NFKD")), return_dtype=pl.Utf8)
def default_normalizer(df: pl.DataFrame) -> pl.DataFrame:
"""Light normaliser: NFKD, drop non-spacing marks (accents), lowercase, drop literal 'null'
address components, every run of non letter/number/spacing-mark chars -> one space, strip.
Spacing marks (\\p{Mc}) are kept so Indic words are not split at vowel signs."""
def base(col: str) -> pl.Expr:
return _nfkd(pl.col(col)).str.replace_all(r"\p{Mn}+", "").str.to_lowercase()
punct = r"[^\p{L}\p{N}\p{Mc}]+"
name = base("business_name").str.replace_all(punct, " ").str.strip_chars()
addr = base("business_address").str.replace_all(r"\bnull\b", " ").str.replace_all(punct, " ").str.strip_chars()
return df.with_columns(name_n=name, addr_n=addr)
def load_normalizer(spec: str | None):
if not spec:
return default_normalizer
mod, _, fn = spec.partition(":")
return getattr(importlib.import_module(mod), fn or "normalize")
def apply_normalizer(fn, df: pl.DataFrame, src: str) -> pl.DataFrame:
out = fn(df)
for c in ("name_n", "addr_n"):
if c not in out.columns:
raise ValueError(f"normaliser must add column {c!r}")
if "name_ns" not in out.columns:
out = out.with_columns(name_ns=pl.col("name_n").str.replace_all(" ", "", literal=True))
return out.select(
"entity_id",
"country",
pl.col("name_n").fill_null(""),
pl.col("name_ns").fill_null(""),
pl.col("addr_n").fill_null(""),
pl.lit(src).alias("src"),
)
NORM_TABLES = {"train": ("s1", "s2", "s3"), "test": ("t1", "t2", "t3")}
def read_norm_parquet(path: str, src: str) -> pl.DataFrame:
"""Read a table written by scripts/preprocess_normalize.py and build the retrieval strings:
name = name_translit (falls back to name_core when null/blank), address = ' '.join(
addr_tokens_translit), spaceless name = name with whitespace removed."""
import pyarrow.parquet as pq
have = set(pq.read_schema(path).names)
need = {"entity_id", "country", "addr_tokens_translit"}
if not need <= have or not ({"name_translit", "name_core"} & have):
raise ValueError(f"{path}: needs {sorted(need)} and name_translit/name_core; has {sorted(have)}")
cols = [c for c in ("entity_id", "country", "name_translit", "name_core", "addr_tokens_translit") if c in have]
df = pl.read_parquet(path, columns=cols)
blank = pl.lit(None, dtype=pl.Utf8)
tr = pl.col("name_translit") if "name_translit" in have else blank
core = pl.col("name_core") if "name_core" in have else blank
ws = r"\s+"
name = (
pl.when(tr.is_not_null() & (tr.str.strip_chars() != "")).then(tr).otherwise(core)
.fill_null("").str.replace_all(ws, " ").str.strip_chars()
)
addr = pl.col("addr_tokens_translit").list.join(" ").fill_null("").str.replace_all(ws, " ").str.strip_chars()
return df.select(
pl.col("entity_id").cast(pl.Utf8).str.strip_chars(),
pl.col("country").cast(pl.Utf8).fill_null("").str.strip_chars(),
name.alias("name_n"),
name.str.replace_all(ws, "").alias("name_ns"),
addr.alias("addr_n"),
pl.lit(src).alias("src"),
)
def strategy_texts(df: pl.DataFrame, strat: str) -> list[str]:
if strat == "name":
e = pl.col("name_ns")
elif strat == "addr":
e = pl.col("addr_n")
else: # nameaddr, word
e = pl.concat_str([pl.col("name_n"), pl.col("addr_n")], separator=" ").str.strip_chars()
return df.select(e.alias("t")).get_column("t").to_list()
def _gather(s: pl.Series, idx: np.ndarray) -> pl.Series:
return s.gather(idx) if hasattr(s, "gather") else s.take(idx)
# --------------------------------------------------------------------------------------------
# vectorisation (hashed, parallel)
# --------------------------------------------------------------------------------------------
def _char3(s: str) -> list[str]:
if not s:
return []
s = f" {s} "
return [s[i : i + 3] for i in range(len(s) - 2)]
def _word12(s: str) -> list[str]:
t = s.split()
return t + [f"{a} {b}" for a, b in zip(t, t[1:])]
_HV: dict = {}
def _vec_worker(args):
texts, kind, n_features = args
hv = _HV.get((kind, n_features))
if hv is None:
hv = HashingVectorizer(
analyzer=_char3 if kind == "char" else _word12,
n_features=n_features,
alternate_sign=False,
norm=None,
dtype=np.float32,
)
_HV[(kind, n_features)] = hv
return hv.transform(texts).tocsr()
def vectorize(texts: list[str], kind: str, n_features: int, vpool, chunk: int) -> sp.csr_matrix:
if not texts:
return sp.csr_matrix((0, n_features), dtype=np.float32)
jobs = ((texts[i : i + chunk], kind, n_features) for i in range(0, len(texts), chunk))
parts = list(vpool.map(_vec_worker, jobs)) if vpool is not None else [_vec_worker(j) for j in jobs]
X = sp.vstack(parts, format="csr") if len(parts) > 1 else parts[0]
del parts
return X.astype(np.float32, copy=False)
def _blocks(n: int, step: int = 100_000_000):
for lo in range(0, n, step):
yield lo, min(n, lo + step)
def _l2_normalize_rows(X: sp.csr_matrix, block: int = 1_000_000) -> None:
n = X.shape[0]
for lo in range(0, n, block):
hi = min(n, lo + block)
s, e = int(X.indptr[lo]), int(X.indptr[hi])
d = X.data[s:e]
cs = np.zeros(e - s + 1, dtype=np.float64)
np.cumsum(d.astype(np.float64) ** 2, out=cs[1:])
ip = X.indptr[lo : hi + 1] - s
nrm = np.sqrt(np.maximum(cs[ip[1:]] - cs[ip[:-1]], 0.0))
nrm[nrm == 0] = 1.0
d *= np.repeat((1.0 / nrm).astype(np.float32), np.diff(ip))
def tfidf_pair(XA: sp.csr_matrix, XB: sp.csr_matrix, max_df: float) -> dict:
"""In place: counts -> (1+log tf) * idf, drop df>max_df*n, l2-normalise rows, then drop
features absent from either side (no effect on A.B^T). idf fit on rows of XA u XB."""
F = XA.shape[1]
dfA = np.bincount(XA.indices, minlength=F)
dfB = np.bincount(XB.indices, minlength=F)
n = XA.shape[0] + XB.shape[0]
df = dfA + dfB
idf = (np.log((1.0 + n) / (1.0 + df)) + 1.0).astype(np.float32)
pruned = (df > max_df * n) if max_df < 1.0 else np.zeros(F, dtype=bool)
idf[pruned] = 0.0
keep = (dfA > 0) & (dfB > 0) & ~pruned
st = {
"n_features_seen": int((df > 0).sum()),
"n_features_pruned_maxdf": int(pruned.sum()),
"n_features_kept": int(keep.sum()),
}
for tag, X in (("A", XA), ("B", XB)):
nnz0 = X.nnz
for lo, hi in _blocks(X.nnz):
d = X.data[lo:hi]
np.log(d, out=d)
d += 1.0
d *= idf[X.indices[lo:hi]]
X.eliminate_zeros()
_l2_normalize_rows(X)
for lo, hi in _blocks(X.nnz):
X.data[lo:hi][~keep[X.indices[lo:hi]]] = 0.0
X.eliminate_zeros()
X.sort_indices()
st[f"nnz_{tag}_raw"] = int(nnz0)
st[f"nnz_{tag}"] = int(X.nnz)
st[f"empty_rows_{tag}"] = float((np.diff(X.indptr) == 0).mean()) if X.shape[0] else 0.0
return st
# --------------------------------------------------------------------------------------------
# top-K sparse retrieval
# --------------------------------------------------------------------------------------------
_G: dict = {} # globals shared with forked workers (copy-on-write)
def _fork_pool(workers: int) -> ProcessPoolExecutor:
"""Fork-based pool: workers inherit module globals (_G) copy-on-write. A worker that dies
raises BrokenProcessPool instead of hanging. On macOS run with
OBJC_DISABLE_INITIALIZE_FORK_SAFETY=YES (Linux needs nothing)."""
return ProcessPoolExecutor(max_workers=workers, mp_context=mp.get_context("fork"))
def _row_costs(Q: sp.csr_matrix, df_t: np.ndarray, block: int = 1_000_000) -> np.ndarray:
"""Multiply-adds of row i of Q @ T.T = sum over its features of the feature's df in T."""
n = Q.shape[0]
out = np.zeros(n, dtype=np.int64)
for lo in range(0, n, block):
hi = min(n, lo + block)
s, e = int(Q.indptr[lo]), int(Q.indptr[hi])
cs = np.zeros(e - s + 1, dtype=np.int64)
np.cumsum(df_t[Q.indices[s:e]], out=cs[1:])
ip = Q.indptr[lo : hi + 1] - s
out[lo:hi] = cs[ip[1:]] - cs[ip[:-1]]
return out
def _plan_chunks(cost: np.ndarray, budget: float, max_rows: int) -> list[tuple[int, int]]:
n = len(cost)
cum = np.cumsum(cost)
chunks, lo = [], 0
while lo < n:
base = cum[lo - 1] if lo else 0
hi = int(np.searchsorted(cum, base + budget, side="right"))
hi = min(max(hi, lo + 1), lo + max_rows, n)
chunks.append((lo, hi))
lo = hi
return chunks
def _csr_rowwise_topk(C: sp.csr_matrix, k: int, min_sim: float, row_offset: int):
indptr, ind, dat = C.indptr, C.indices, C.data
n = C.shape[0]
lens = np.diff(indptr)
rows_all = np.repeat(np.arange(n, dtype=np.int32), lens)
small = lens <= k
sel = small[rows_all] & (dat > min_sim)
R, Cc, V = [rows_all[sel]], [ind[sel]], [dat[sel]]
for i in np.flatnonzero(~small):
s, e = indptr[i], indptr[i + 1]
d = dat[s:e]
p = np.argpartition(d, (e - s) - k)[(e - s) - k :]
p = p[d[p] > min_sim]
R.append(np.full(len(p), i, dtype=np.int32))
Cc.append(ind[s:e][p])
V.append(d[p])
return (
np.concatenate(R).astype(np.int32) + np.int32(row_offset),
np.concatenate(Cc).astype(np.int32),
np.concatenate(V).astype(np.float32),
)
def _topk_scipy_worker(task):
lo, hi = task
C = (_G["Q"][lo:hi] @ _G["TT"]).tocsr()
return _csr_rowwise_topk(C, _G["k"], _G["min_sim"], lo)
def _topk_scipy(Q, TT, k, min_sim, workers, chunks):
_G.update(Q=Q, TT=TT, k=k, min_sim=min_sim)
try:
if workers > 1 and len(chunks) > 1:
with _fork_pool(workers) as p:
out = list(p.map(_topk_scipy_worker, chunks))
else:
out = [_topk_scipy_worker(c) for c in chunks]
finally:
_G.clear()
return out
def _topk_sdt(Q, TT, k, min_sim, workers, rows_per_call):
sp_matmul_topn = _sdt.sp_matmul_topn
out = []
n = Q.shape[0]
for lo in range(0, n, rows_per_call):
hi = min(n, lo + rows_per_call)
C = sp_matmul_topn(
Q[lo:hi], TT, top_n=k, threshold=min_sim, sort=False, n_threads=workers if workers > 1 else None
).tocsr()
rows = np.repeat(np.arange(lo, hi, dtype=np.int32), np.diff(C.indptr))
out.append((rows, C.indices.astype(np.int32), C.data.astype(np.float32)))
return out
def topk_search(Q: sp.csr_matrix, T: sp.csr_matrix, k: int, args, label: str):
"""Top-k columns of Q @ T.T per row of Q (cosine; rows are l2-normalised)."""
empty = (np.zeros(0, np.int32), np.zeros(0, np.int32), np.zeros(0, np.float32))
if k <= 0 or Q.shape[0] == 0 or T.shape[0] == 0:
return empty, {}
TT = T.T.tocsr() # (F x n_target)
cost = _row_costs(Q, np.diff(TT.indptr).astype(np.int64))
total_ops = int(cost.sum())
t = time.time()
if args.backend == "sdt":
out = _topk_sdt(Q, TT, k, args.min_sim, args.workers, args.sdt_rows)
n_chunks = math.ceil(Q.shape[0] / args.sdt_rows)
else:
chunks = _plan_chunks(cost, args.chunk_ops, args.chunk_max_rows)
n_chunks = len(chunks)
out = _topk_scipy(Q, TT, k, args.min_sim, args.workers, chunks)
del TT
dt = time.time() - t
qi = np.concatenate([o[0] for o in out]) if out else empty[0]
ti = np.concatenate([o[1] for o in out]) if out else empty[1]
sim = np.concatenate([o[2] for o in out]) if out else empty[2]
st = {
"n_query": int(Q.shape[0]),
"n_target": int(T.shape[0]),
"k": int(k),
"est_mult_adds": total_ops,
"max_row_mult_adds": int(cost.max()) if len(cost) else 0,
"n_chunks": int(n_chunks),
"seconds": round(dt, 2),
"mult_adds_per_s": round(total_ops / dt, 1) if dt > 0 else None,
"n_pairs": int(len(qi)),
}
log(
f" {label}: {Q.shape[0]:,} x {T.shape[0]:,} k={k} ops={total_ops:.3e} "
f"chunks={n_chunks} -> {len(qi):,} pairs in {dt:.1f}s ({st['mult_adds_per_s'] or 0:.2e} ops/s)"
)
return (qi, ti, sim), st
# --------------------------------------------------------------------------------------------
# exact cosines for arbitrary pairs (fill-sims)
# --------------------------------------------------------------------------------------------
def _fill_worker(task):
lo, hi = task
a, b = _G["a"][lo:hi], _G["b"][lo:hi]
res = {}
for s, (XA, XB) in _G["mats"].items():
res[s] = np.asarray(XA[a].multiply(XB[b]).sum(axis=1), dtype=np.float32).ravel()
return lo, res
def fill_sims(a: np.ndarray, b: np.ndarray, mats: dict, workers: int, chunk: int) -> dict:
n = len(a)
out = {s: np.zeros(n, dtype=np.float32) for s in mats}
tasks = [(lo, min(n, lo + chunk)) for lo in range(0, n, chunk)]
_G.update(a=a, b=b, mats=mats)
try:
if workers > 1 and len(tasks) > 1:
with _fork_pool(workers) as p:
for lo, res in p.map(_fill_worker, tasks):
for s, v in res.items():
out[s][lo : lo + len(v)] = v
else:
for t in tasks:
lo, res = _fill_worker(t)
for s, v in res.items():
out[s][lo : lo + len(v)] = v
finally:
_G.clear()
return out
# --------------------------------------------------------------------------------------------
# per-country blocking
# --------------------------------------------------------------------------------------------
def _group_rank(g: np.ndarray, sim: np.ndarray) -> np.ndarray:
"""0-based rank of each element within its group g, by descending sim."""
if len(g) == 0:
return np.zeros(0, dtype=np.int16)
order = np.lexsort((-sim, g))
gs = g[order]
starts = np.r_[0, np.flatnonzero(gs[1:] != gs[:-1]) + 1]
pos = np.arange(len(gs)) - np.repeat(starts, np.diff(np.r_[starts, len(gs)]))
r = np.empty(len(g), dtype=np.int64)
r[order] = pos
return np.minimum(r, int(NO_RANK) - 1).astype(np.int16)
def _k_grid(k: int) -> list[int]:
return sorted({x for x in (1, 2, 3, 5, 10, 15, 20, 30, 50, 100) if x < k} | {k})
def _sweeps(a, q_idx, n_a, ranks, is_match, rev_only_rank, kmap, args) -> dict:
"""Pair counts / true-pair counts / per-S1 candidate counts under alternative K and
reverse-cap settings, computed from the retrieved (uncapped) pairs."""
out: dict = {"recall_at_k": {}, "configs": {}}
fwd = [s for s in STRATS if kmap[s] > 0]
for s in fwd:
r = ranks[s]
out["recall_at_k"][s] = {int(k): int((is_match & (r < k)).sum()) for k in _k_grid(kmap[s])}
if args.reverse_k > 0:
r = ranks["rev"]
out["recall_at_k"]["rev"] = {int(k): int((is_match & (r < k)).sum()) for k in range(1, args.reverse_k + 1)}
from_rev = ranks["rev"] != NO_RANK
def add(name, keep):
out["configs"][name] = {
"pairs": int(keep.sum()),
"true": int((keep & is_match).sum()),
"per_s1": np.bincount(a[keep], minlength=n_a)[q_idx],
}
for f in K_FRACS:
keep = from_rev.copy()
for s in fwd:
keep |= ranks[s] < max(1, math.ceil(f * kmap[s]))
add(f"k_x{f}", keep)
keep_norev = np.zeros(len(a), dtype=bool)
for s in fwd:
keep_norev |= ranks[s] < max(1, math.ceil(f * kmap[s]))
add(f"k_x{f}_norev", keep_norev)
fwd_any = np.zeros(len(a), dtype=bool)
for s in fwd:
fwd_any |= ranks[s] != NO_RANK
for c in REV_CAPS:
add(f"revcap_{c}", fwd_any | (rev_only_rank < c))
return out
def block_country(country, s1c, poolc, q_idx, args, vpool, gt_pairs_c):
n_a, n_b = s1c.height, poolc.height
sampled = len(q_idx) < n_a
is_query = np.zeros(n_a, dtype=bool)
is_query[q_idx] = True
kmap = {"name": args.k_name, "nameaddr": args.k_nameaddr, "addr": args.k_addr, "word": args.k_word}
results: dict[str, tuple] = {}
mats: dict[str, tuple] = {}
cstats: dict = {"n_s1_full": n_a, "n_s1_query": int(len(q_idx)), "n_pool": n_b, "strategies": {}}
for strat in STRATS:
k = kmap[strat]
need_rev = strat == "nameaddr" and args.reverse_k > 0
if k <= 0 and not need_rev:
continue
kind = "word" if strat == "word" else "char"
nf = 1 << (args.hash_bits_word if kind == "word" else args.hash_bits_char)
tag = f"{country}/{strat}"
sst: dict = {}
with stage(f"{tag}/vectorize"):
XA = vectorize(strategy_texts(s1c, strat), kind, nf, vpool, args.vec_chunk)
XB = vectorize(strategy_texts(poolc, strat), kind, nf, vpool, args.vec_chunk)
with stage(f"{tag}/tfidf"):
sst["tfidf"] = tfidf_pair(XA, XB, args.max_df)
log(f" {tag} tfidf: {sst['tfidf']}")
if k > 0:
with stage(f"{tag}/topk_forward"):
Q = XA[q_idx] if sampled else XA
(qi, ti, sim), sst["forward"] = topk_search(Q, XB, k, args, f"{tag} fwd")
del Q
a = q_idx[qi].astype(np.int32) if sampled else qi
results[strat] = (a, ti, sim, _group_rank(qi, sim))
if need_rev:
with stage(f"{tag}/topk_reverse"):
if sampled and args.reverse_scope == "sample":
T = XA[q_idx]
(qi, ti, sim), sst["reverse"] = topk_search(XB, T, args.reverse_k, args, f"{tag} rev")
del T
rrank = _group_rank(qi, sim)
a, b = q_idx[ti].astype(np.int32), qi
else:
(qi, ti, sim), sst["reverse"] = topk_search(XB, XA, args.reverse_k, args, f"{tag} rev")
rrank = _group_rank(qi, sim) # rank among the pool record's full S1 list
keep = is_query[ti]
a, b, sim, rrank = ti[keep], qi[keep], sim[keep], rrank[keep]
results["rev"] = (a, b, sim, rrank)
if args.fill_sims and k > 0:
mats[strat] = (XA, XB)
else:
del XA, XB
gc.collect()
cstats["strategies"][strat] = sst
with stage(f"{country}/union"):
frames = []
for s_, (a, b, sim, rank) in results.items():
key = a.astype(np.int64) * n_b + b.astype(np.int64)
frames.append(pl.DataFrame({"key": key, f"sim_{s_}": sim, f"rank_{s_}": rank}))
present = list(results)
if frames:
U = (
pl.concat(frames, how="diagonal")
.group_by("key")
.agg([pl.col(f"sim_{x}").max() for x in present] + [pl.col(f"rank_{x}").min() for x in present])
.sort("key")
)
else:
U = pl.DataFrame({"key": np.zeros(0, np.int64)})
del frames, results
for x in list(STRATS) + ["rev"]:
if f"sim_{x}" not in U.columns:
U = U.with_columns(pl.lit(None, dtype=pl.Float32).alias(f"sim_{x}"), pl.lit(None, dtype=pl.Int16).alias(f"rank_{x}"))
U = U.with_columns(sim_na_ret=pl.coalesce("sim_nameaddr", "sim_rev"))
key = U.get_column("key").to_numpy()
a = (key // n_b).astype(np.int32)
ranks = {x: U.get_column(f"rank_{x}").fill_null(NO_RANK).to_numpy() for x in list(STRATS) + ["rev"]}
fwd_any = np.zeros(len(key), dtype=bool)
for x in STRATS:
fwd_any |= ranks[x] != NO_RANK
rev_only = (ranks["rev"] != NO_RANK) & ~fwd_any
rev_only_rank = np.full(len(key), NO_RANK, dtype=np.int16)
rev_only_rank[rev_only] = _group_rank(a[rev_only], U.get_column("sim_na_ret").to_numpy()[rev_only])
is_match = None
if gt_pairs_c is not None:
ga = gt_pairs_c.join(s1c.select("entity_id").with_row_index("a"), left_on="s1_id", right_on="entity_id")
ga = ga.join(poolc.select("entity_id").with_row_index("b"), left_on="cand_id", right_on="entity_id")
gkey = np.sort(ga.get_column("a").to_numpy().astype(np.int64) * n_b + ga.get_column("b").to_numpy().astype(np.int64))
pos = np.searchsorted(gkey, key)
is_match = (pos < len(gkey)) & (gkey[np.minimum(pos, max(len(gkey) - 1, 0))] == key) if len(gkey) else np.zeros(len(key), bool)
cstats["sweeps"] = _sweeps(a, q_idx, n_a, ranks, is_match, rev_only_rank, kmap, args)
cstats["n_pairs_before_cap"] = int(len(key))
cstats["n_reverse_only_pairs"] = int(rev_only.sum())
if args.reverse_cap > 0:
keep = rev_only_rank < args.reverse_cap
keep |= ~rev_only
U = U.filter(pl.Series(keep))
key, a = key[keep], a[keep]
is_match = is_match[keep] if is_match is not None else None
b = (key % n_b).astype(np.int32)
del ranks, fwd_any, rev_only, rev_only_rank
log(f" {country}: {len(a):,} unique candidate pairs")
if args.fill_sims and mats:
with stage(f"{country}/fill_sims"):
filled = fill_sims(a, b, mats, args.workers, args.fill_chunk)
U = U.with_columns([pl.Series(f"sim_{x}", v) for x, v in filled.items()])
del filled
else:
U = U.with_columns(sim_nameaddr=pl.col("sim_na_ret"))
del mats
gc.collect()
with stage(f"{country}/assemble"):
cols = {
"s1_id": _gather(s1c.get_column("entity_id"), a),
"cand_id": _gather(poolc.get_column("entity_id"), b),
"country": pl.repeat(country, len(a), eager=True, dtype=pl.Utf8).alias("country"),
"src": _gather(poolc.get_column("src"), b),
}
for x in STRATS:
cols[f"sim_{x}"] = U.get_column(f"sim_{x}").cast(pl.Float32)
for x in STRATS:
cols[f"f_{x}"] = U.get_column(f"rank_{x}").is_not_null().alias(f"f_{x}")
cols["from_reverse"] = U.get_column("rank_rev").is_not_null().alias("from_reverse")
for x in list(STRATS) + ["rev"]:
cols[f"rank_{x}"] = U.get_column(f"rank_{x}").cast(pl.Int16)
if is_match is not None:
cols["is_match"] = pl.Series("is_match", is_match)
out = pl.DataFrame(cols)
del U
per_s1 = np.bincount(a, minlength=n_a)[q_idx]
cstats["n_pairs"] = int(out.height)
cstats["pairs_per_strategy"] = {c: int(out.get_column(c).sum()) for c in FLAG_COLS}
return out, per_s1, cstats
# --------------------------------------------------------------------------------------------
# evaluation
# --------------------------------------------------------------------------------------------
def _dist(x: np.ndarray) -> dict:
if len(x) == 0:
return {}
return {
"mean": round(float(x.mean()), 3),
"p50": float(np.percentile(x, 50)),
"p90": float(np.percentile(x, 90)),
"p99": float(np.percentile(x, 99)),
"max": int(x.max()),
"share_zero": round(float((x == 0).mean()), 5),
}
def evaluate(gt_pairs: pl.DataFrame, hits: pl.DataFrame, query_ids: pl.DataFrame) -> dict:
"""gt_pairs: s1_id,cand_id,country,src for queried S1 ids. hits: candidate rows with
is_match (s1_id,cand_id,country,src,flags). query_ids: s1_id,country of all queried S1."""
hits = hits.with_columns(union=pl.lit(True))
names = FLAG_COLS + ["union"]
m: dict = {}
def recall(group: list[str]):
if group:
tot = gt_pairs.group_by(group).agg(pl.len().alias("n_gt"))
hit = hits.group_by(group).agg([pl.col(f).sum() for f in names])
j = tot.join(hit, on=group, how="left").fill_null(0).sort(group)
return {
"|".join(str(r[g]) for g in group): {
"n_gt_pairs": int(r["n_gt"]),
**{f: round(r[f] / r["n_gt"], 5) if r["n_gt"] else None for f in names},
}
for r in j.iter_rows(named=True)
}
n = gt_pairs.height
return {"n_gt_pairs": n, **{f: round(hits.get_column(f).sum() / n, 5) if n else None for f in names}}
m["pair_recall"] = {
"overall": recall([]),
"by_country": recall(["country"]),
"by_source": recall(["src"]),
"by_country_source": recall(["country", "src"]),
}
n = gt_pairs.height
strat_flags = FLAG_COLS
only, without = {}, {}
for f in strat_flags:
others = [g for g in strat_flags if g != f]
any_other = pl.any_horizontal([pl.col(g) for g in others])
only[f] = round(hits.filter(pl.col(f) & ~any_other).height / n, 5) if n else None
without[f] = round(hits.filter(any_other).height / n, 5) if n else None
m["pair_recall_only_this_strategy"] = only
m["pair_recall_union_without"] = without
ns = gt_pairs.select("s1_id", "country").unique()
ent = hits.group_by("s1_id").agg([pl.col(f).any() for f in names])
e = ns.join(ent, on="s1_id", how="left").fill_null(False)
n_ns = e.height
m["entity_any_found"] = {
"n_nonsingleton_entities": n_ns,
"overall": {f: round(e.get_column(f).sum() / n_ns, 5) if n_ns else None for f in names},
"by_country": {
str(r["country"]): {f: round(r[f] / r["n"], 5) for f in names}
for r in e.group_by("country").agg([pl.len().alias("n")] + [pl.col(f).sum() for f in names]).sort("country").iter_rows(named=True)
},
}
m["n_query_s1"] = query_ids.height
m["n_query_singletons"] = query_ids.height - n_ns
# all-true-found per entity (the matcher's recall ceiling at entity level)
per = gt_pairs.group_by("s1_id").agg(pl.len().alias("n_true")).join(
hits.group_by("s1_id").agg(pl.len().alias("n_found")), on="s1_id", how="left"
).fill_null(0)
m["entity_all_found"] = round(float((per.get_column("n_found") == per.get_column("n_true")).mean()), 5) if per.height else None
return m
def print_report(metrics: dict) -> None:
ev = metrics.get("eval")
print("\n================ BLOCKING REPORT ================")
print(f"countries: {', '.join(metrics['countries'])}")
print(f"queried S1: {metrics['n_query_s1']:,} pool (all countries): {metrics['n_pool_total']:,}")
print(f"candidate pairs: {metrics['n_pairs']:,} reduction ratio: {metrics['reduction_ratio']:.6f}")
print(f"candidates per S1: {metrics['cands_per_s1']}")
print("pairs per strategy:", {k: f"{v:,}" for k, v in metrics["pairs_per_strategy"].items()})
if not ev:
return
names = FLAG_COLS + ["union"]
pr = ev["pair_recall"]
cols = [("overall", pr["overall"])]
cols += [(f"src={k}", v) for k, v in pr["by_source"].items()]
cols += [(f"{k}", v) for k, v in pr["by_country"].items()]
hdr = f"{'strategy':<14}" + "".join(f"{c[0][:13]:>14}" for c in cols) + f"{'ent_any':>10}{'only_this':>11}{'union_wo':>10}"
print("\nPAIR RECALL (share of ground-truth pairs retrieved)")
print(f"{'n_gt_pairs':<14}" + "".join(f"{c[1]['n_gt_pairs']:>14,}" for c in cols))
print(hdr)
for f in names:
row = f"{f:<14}" + "".join(f"{(c[1][f] or 0):>14.4f}" for c in cols)
row += f"{ev['entity_any_found']['overall'][f] or 0:>10.4f}"
if f != "union":
row += f"{ev['pair_recall_only_this_strategy'][f] or 0:>11.4f}{ev['pair_recall_union_without'][f] or 0:>10.4f}"
print(row)
print(f"entities with ALL true matches retrieved: {ev['entity_all_found']}")
print("by country x source (union):", {k: v["union"] for k, v in pr["by_country_source"].items()})
print(f"non-singleton queried entities: {ev['entity_any_found']['n_nonsingleton_entities']:,} singletons: {ev['n_query_singletons']:,}")
if ev.get("recall_at_k"):
print("\nPAIR RECALL @ k (per strategy, share of all ground-truth pairs)")
for st_, d in ev["recall_at_k"].items():
print(f" {st_:<9}" + " ".join(f"@{k}:{v:.4f}" for k, v in d.items()))
if ev.get("sweeps"):
print("\nSWEEPS (computed from the uncapped retrieval; k_xF scales every forward K by F)")
print(f" {'config':<18}{'union_rec':>10}{'pairs':>14}{'mean/S1':>9}{'p50':>6}{'p90':>6}{'p99':>6}{'max':>7}")
for name, d in ev["sweeps"].items():
c = d["cands_per_s1"]
print(f" {name:<18}{d['union_pair_recall'] or 0:>10.4f}{d['pairs']:>14,}{c.get('mean', 0):>9.1f}"
f"{c.get('p50', 0):>6.0f}{c.get('p90', 0):>6.0f}{c.get('p99', 0):>6.0f}{c.get('max', 0):>7}")
# --------------------------------------------------------------------------------------------
# main
# --------------------------------------------------------------------------------------------
def parse_args(argv=None):
p = argparse.ArgumentParser(description=__doc__.split("\n\n")[0], formatter_class=argparse.ArgumentDefaultsHelpFormatter)
p.add_argument("--s1", default=None, help="Source-1 TSV (not needed with --norm-dir)")
p.add_argument("--s2", default=None)
p.add_argument("--s3", default=None)
p.add_argument(
"--norm-dir",
default=None,
help="read pre-normalised DIR/{s1,s2,s3}.parquet (or t1,t2,t3 with --split test) from "
"scripts/preprocess_normalize.py instead of the TSVs + light normaliser",
)
p.add_argument("--split", choices=["train", "test"], default="train", help="which tables to read from --norm-dir")
p.add_argument("--gt", default=None, help="train_ground_truth.tsv; enables recall metrics and is_match column")
p.add_argument("--out", required=True, help="output parquet; metrics go to <out stem>.metrics.json")
p.add_argument("--max-s1", type=int, default=None, help="random S1 subsample (pool stays FULL)")
p.add_argument("--seed", type=int, default=13)
p.add_argument("--k-name", type=int, default=20)
p.add_argument("--k-nameaddr", type=int, default=20)
p.add_argument("--k-addr", type=int, default=15)
p.add_argument("--k-word", type=int, default=10)
p.add_argument("--reverse-k", type=int, default=3)
p.add_argument(
"--reverse-scope",
choices=["full", "sample"],
default="full",
help="with --max-s1: reverse search against the full country S1 (exact, costs a full reverse pass) "
"or only the sample (fast, overstates reverse recall)",
)
p.add_argument(
"--reverse-cap",
type=int,
default=0,
help="keep at most this many reverse-only pairs per S1 (highest nameaddr cosine); 0 = keep all. "
"The metrics JSON has a sweep over caps to choose it",
)
p.add_argument("--workers", type=int, default=min(30, os.cpu_count() or 1))
p.add_argument("--country-filter", default=None, help="comma-separated countries to process")
p.add_argument("--normalizer", default=None, help="pkg.module:function hook (see module docstring)")
p.add_argument("--backend", choices=["auto", "sdt", "scipy"], default="auto")
p.add_argument("--max-df", type=float, default=0.02, help="drop features with df > max_df * (n_s1 + n_pool); 1 = off")
p.add_argument("--min-sim", type=float, default=0.0, help="keep cosines strictly above this")
p.add_argument("--hash-bits-char", type=int, default=22)
p.add_argument("--hash-bits-word", type=int, default=24)
p.add_argument("--vec-chunk", type=int, default=20000)
p.add_argument("--sdt-rows", type=int, default=200000, help="query rows per sparse_dot_topn call")
p.add_argument("--chunk-ops", type=float, default=5e7, help="scipy backend: multiply-adds per chunk")
p.add_argument("--chunk-max-rows", type=int, default=20000, help="scipy backend: max query rows per chunk")
p.add_argument("--fill-sims", action=argparse.BooleanOptionalAction, default=True)
p.add_argument("--fill-chunk", type=int, default=200000)
a = p.parse_args(argv)
if not a.norm_dir and not (a.s1 and a.s2 and a.s3):
p.error("give --s1 --s2 --s3, or --norm-dir")
return a
def main(argv=None) -> dict:
args = parse_args(argv)
if args.backend == "auto":
omp = _sdt is not None and getattr(_sdt, "_has_openmp_support", True)
args.backend = "sdt" if _sdt is not None and (omp or args.workers <= 1) else "scipy"
if args.backend == "sdt" and _sdt is None:
raise SystemExit("--backend sdt requested but sparse_dot_topn is not importable (pip install sparse-dot-topn)")
args.workers = max(1, args.workers)
log(f"config: {vars(args)}")
# fork the vectoriser pool while the process is still small (fork happens on first submit)
vpool = _fork_pool(args.workers) if args.workers > 1 else None
if vpool is not None:
vpool.submit(int).result()
out_dir = os.path.dirname(os.path.abspath(args.out))
os.makedirs(out_dir, exist_ok=True)
metrics_path = os.path.splitext(args.out)[0] + ".metrics.json"
norm = load_normalizer(args.normalizer)
if args.norm_dir:
if args.normalizer or args.s1:
log(" --norm-dir given: --s1/--s2/--s3 and --normalizer are ignored")
paths = [os.path.join(args.norm_dir, f"{t}.parquet") for t in NORM_TABLES[args.split]]
else:
paths = [args.s1, args.s2, args.s3]
with stage("load+normalise"):
S = {}
for tag, path in zip(("S1", "S2", "S3"), paths):
if args.norm_dir:
S[tag] = read_norm_parquet(path, tag)
else:
S[tag] = apply_normalizer(norm, read_source(path), tag)
if args.country_filter:
keep = [c.strip() for c in args.country_filter.split(",")]
S[tag] = S[tag].filter(pl.col("country").is_in(keep))
log(f" {tag}: {S[tag].height:,} rows from {path}")
s1 = S.pop("S1")
pool = pl.concat([S.pop("S2"), S.pop("S3")])
rng = np.random.default_rng(args.seed)
is_q = np.ones(s1.height, dtype=bool)
if args.max_s1 and args.max_s1 < s1.height:
is_q[:] = False
is_q[rng.choice(s1.height, args.max_s1, replace=False)] = True
s1 = s1.with_columns(pl.Series("is_query", is_q))
query_ids = s1.filter(pl.col("is_query")).select(pl.col("entity_id").alias("s1_id"), "country")
log(f"queried S1: {query_ids.height:,} of {s1.height:,}; pool: {pool.height:,}")
gt_pairs = None
if args.gt:
with stage("load_gt"):
gt = read_tsv(args.gt)
gt = gt.rename({gt.columns[0]: "s1_id", gt.columns[1]: "matched"}).select("s1_id", "matched")
gt_pairs = (
gt.join(query_ids, on="s1_id", how="inner")
.with_columns(pl.col("matched").str.split(","))
.explode("matched") # empty lists -> null row, removed by the filter below
.with_columns(pl.col("matched").str.strip_chars())
.filter(pl.col("matched").str.len_chars() > 0)
.select("s1_id", pl.col("matched").alias("cand_id"), "country", pl.col("matched").str.slice(0, 2).alias("src"))
.unique(["s1_id", "cand_id"])
)
n_missing = query_ids.height - gt.join(query_ids, on="s1_id", how="inner").height
log(f" gt pairs for queried S1: {gt_pairs.height:,}; queried S1 absent from gt file: {n_missing:,}")
del gt
countries = sorted(s1.get_column("country").unique().to_list())
metrics: dict = {"config": vars(args), "countries": countries, "per_country": {}}
writer = None
per_s1_all, hits_all = [], []
sweep_acc: dict = {"recall_at_k": {}, "configs": {}}
total_pairs, all_pairs_space = 0, 0
pps = {c: 0 for c in FLAG_COLS}
try:
import pyarrow.parquet as pq
for country in countries:
s1c = s1.filter(pl.col("country") == country)
poolc = pool.filter(pl.col("country") == country)
q_idx = np.flatnonzero(s1c.get_column("is_query").to_numpy()).astype(np.int64)
if len(q_idx) == 0:
continue
all_pairs_space += len(q_idx) * poolc.height
if poolc.height == 0:
per_s1_all.append(np.zeros(len(q_idx), dtype=np.int64))
for acc in sweep_acc["configs"].values():
acc["per_s1"].append(np.zeros(len(q_idx), dtype=np.int64))
metrics["per_country"][country] = {"n_s1_query": int(len(q_idx)), "n_pool": 0, "n_pairs": 0}
continue
log(f"=== {country}: S1 {s1c.height:,} (queried {len(q_idx):,}) x pool {poolc.height:,} ===")
gtc = gt_pairs.filter(pl.col("country") == country) if gt_pairs is not None else None
out, per_s1, cst = block_country(country, s1c, poolc, q_idx, args, vpool, gtc)
sw = cst.pop("sweeps", None)
if sw:
for st_, d in sw["recall_at_k"].items():
acc = sweep_acc["recall_at_k"].setdefault(st_, {})
for k, v in d.items():
acc[k] = acc.get(k, 0) + v
for name, d in sw["configs"].items():
acc = sweep_acc["configs"].setdefault(name, {"pairs": 0, "true": 0, "per_s1": []})
acc["pairs"] += d["pairs"]
acc["true"] += d["true"]
acc["per_s1"].append(d["per_s1"])
if gtc is not None:
cst["gt_pairs_not_in_country_pool"] = int(gtc.filter(~pl.col("cand_id").is_in(poolc.get_column("entity_id"))).height)
hits_all.append(out.filter(pl.col("is_match")).select(["s1_id", "cand_id", "country", "src"] + FLAG_COLS))
with stage(f"{country}/write"):
tbl = out.to_arrow()
if writer is None:
writer = pq.ParquetWriter(args.out, tbl.schema, compression="zstd")
writer.write_table(tbl.cast(writer.schema))
del tbl
per_s1_all.append(per_s1)
total_pairs += out.height
for c in FLAG_COLS:
pps[c] += cst["pairs_per_strategy"][c]
metrics["per_country"][country] = cst
del out, s1c, poolc
gc.collect()
if writer is None: # nothing produced: write an empty file with the schema
empty = pl.DataFrame(
{"s1_id": [], "cand_id": [], "country": [], "src": []}, schema={c: pl.Utf8 for c in ["s1_id", "cand_id", "country", "src"]}
).with_columns([pl.lit(None, dtype=pl.Float32).alias(c) for c in SIM_COLS] + [pl.lit(None, dtype=pl.Boolean).alias(c) for c in FLAG_COLS])
empty.write_parquet(args.out)
finally:
if writer is not None:
writer.close()
if vpool is not None:
vpool.shutdown(wait=False, cancel_futures=True)
per_s1 = np.concatenate(per_s1_all) if per_s1_all else np.zeros(0, dtype=np.int64)
metrics.update(
n_query_s1=int(query_ids.height),
n_pool_total=int(pool.height),
n_pairs=int(total_pairs),
all_within_country_pairs=int(all_pairs_space),
reduction_ratio=(1.0 - total_pairs / all_pairs_space) if all_pairs_space else None,
cands_per_s1=_dist(per_s1),
pairs_per_strategy=pps,
)
if gt_pairs is not None:
with stage("evaluate"):
hits = pl.concat(hits_all) if hits_all else pl.DataFrame(schema={"s1_id": pl.Utf8, "cand_id": pl.Utf8, "country": pl.Utf8, "src": pl.Utf8, **{c: pl.Boolean for c in FLAG_COLS}})
metrics["eval"] = evaluate(gt_pairs, hits, query_ids)
n_gt = gt_pairs.height
metrics["eval"]["recall_at_k"] = {
st_: {str(k): round(v / n_gt, 5) for k, v in sorted(d.items())} for st_, d in sweep_acc["recall_at_k"].items()
} if n_gt else {}
metrics["eval"]["sweeps"] = {
name: {
"union_pair_recall": round(d["true"] / n_gt, 5) if n_gt else None,
"pairs": d["pairs"],
"cands_per_s1": _dist(np.concatenate(d["per_s1"])) if d["per_s1"] else {},
}
for name, d in sweep_acc["configs"].items()
}
own, kids = _peak_gb()
metrics["timings_s"] = {k: round(v, 2) for k, v in TIMINGS.items()}
metrics["total_seconds"] = round(time.time() - _T0, 1)
metrics["peak_rss_gb"] = {"main": round(own, 2), "largest_child": round(kids, 2)}
with open(metrics_path, "w") as f:
json.dump(metrics, f, indent=2, default=lambda o: o.item() if hasattr(o, "item") else str(o))
print_report(metrics)
log(f"wrote {args.out} and {metrics_path}; peak rss main={own:.2f}GB child={kids:.2f}GB")
return metrics
if __name__ == "__main__":
main()
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