Hugging Face's logo

Datasets:
Biogod
/
HESRT

Modalities:
Image
Tabular
Text
Formats:
parquet
Languages:
English
Size:
1K - 10K
Tags:
spatial-transcriptomics
spatial-omics
histology
multimodal
anndata
biology
Libraries:
Datasets
pandas
Polars
License:
Dataset card Data Studio Files
xet
 Community
1
Biogod commited on
Commit
4c0d07e
·
verified ·
1 Parent(s): 37dfe42

Upload GSE268154

Browse files
Files changed (17) hide show
  1. .gitattributes +8 -0
  2. GSE268154/Singh_2025_1_0hr/metadata.json +11 -0
  3. GSE268154/Singh_2025_1_0hr/qc_panel.png +3 -0
  4. GSE268154/Singh_2025_1_0hr/spatial.h5ad +3 -0
  5. GSE268154/Singh_2025_1_0hr/wsi.tif +3 -0
  6. GSE268154/Singh_2025_2_12hr/metadata.json +11 -0
  7. GSE268154/Singh_2025_2_12hr/qc_panel.png +3 -0
  8. GSE268154/Singh_2025_2_12hr/spatial.h5ad +3 -0
  9. GSE268154/Singh_2025_2_12hr/wsi.tif +3 -0
  10. GSE268154/Singh_2025_3_24hr/metadata.json +11 -0
  11. GSE268154/Singh_2025_3_24hr/qc_panel.png +3 -0
  12. GSE268154/Singh_2025_3_24hr/spatial.h5ad +3 -0
  13. GSE268154/Singh_2025_3_24hr/wsi.tif +3 -0
  14. GSE268154/Singh_2025_4_48hr/metadata.json +11 -0
  15. GSE268154/Singh_2025_4_48hr/qc_panel.png +3 -0
  16. GSE268154/Singh_2025_4_48hr/spatial.h5ad +3 -0
  17. GSE268154/Singh_2025_4_48hr/wsi.tif +3 -0
.gitattributes CHANGED
@@ -146,3 +146,11 @@ GSE262430/GSM8169584/spatial.h5ad filter=lfs diff=lfs merge=lfs -text
146
  GSE262430/GSM8169584/wsi.tif filter=lfs diff=lfs merge=lfs -text
147
  GSE262430/GSM8169585/spatial.h5ad filter=lfs diff=lfs merge=lfs -text
148
  GSE262430/GSM8169585/wsi.tif filter=lfs diff=lfs merge=lfs -text
 
 
 
 
 
 
 
 
 
146
  GSE262430/GSM8169584/wsi.tif filter=lfs diff=lfs merge=lfs -text
147
  GSE262430/GSM8169585/spatial.h5ad filter=lfs diff=lfs merge=lfs -text
148
  GSE262430/GSM8169585/wsi.tif filter=lfs diff=lfs merge=lfs -text
149
+ GSE268154/Singh_2025_1_0hr/spatial.h5ad filter=lfs diff=lfs merge=lfs -text
150
+ GSE268154/Singh_2025_1_0hr/wsi.tif filter=lfs diff=lfs merge=lfs -text
151
+ GSE268154/Singh_2025_2_12hr/spatial.h5ad filter=lfs diff=lfs merge=lfs -text
152
+ GSE268154/Singh_2025_2_12hr/wsi.tif filter=lfs diff=lfs merge=lfs -text
153
+ GSE268154/Singh_2025_3_24hr/spatial.h5ad filter=lfs diff=lfs merge=lfs -text
154
+ GSE268154/Singh_2025_3_24hr/wsi.tif filter=lfs diff=lfs merge=lfs -text
155
+ GSE268154/Singh_2025_4_48hr/spatial.h5ad filter=lfs diff=lfs merge=lfs -text
156
+ GSE268154/Singh_2025_4_48hr/wsi.tif filter=lfs diff=lfs merge=lfs -text
GSE268154/Singh_2025_1_0hr/metadata.json ADDED
@@ -0,0 +1,11 @@
 
 
 
 
 
 
 
 
 
 
 
 
1
+ {
2
+ "organism": "Mus musculus",
3
+ "tissue": "Kidney",
4
+ "disease": "Cold Ischemia Injury",
5
+ "sex": "male",
6
+ "age": "7-8 weeks",
7
+ "technology": "Visium",
8
+ "stain_type": "H&E",
9
+ "publication_doi": "10.1101/2025.05.25.654911",
10
+ "repository_id": "GEO (GSE268154)"
11
+ }
GSE268154/Singh_2025_1_0hr/qc_panel.png ADDED

Git LFS Details

  • SHA256: 138262171fdd3c82358598da597c772cfea1f0938cc34cbc76fa19bf24cd048d
  • Pointer size: 132 Bytes
  • Size of remote file: 1.25 MB
GSE268154/Singh_2025_1_0hr/spatial.h5ad ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:1b36bdf62ee960e9a8092c678cf6b940a8e28886e71c7171a38c16a48355a504
3
+ size 158818049
GSE268154/Singh_2025_1_0hr/wsi.tif ADDED

Git LFS Details

  • SHA256: 9ce7d0677a58c96122530efb4f94f270e35127b6043469ac445d4940b90cb49a
  • Pointer size: 133 Bytes
  • Size of remote file: 11.9 MB
GSE268154/Singh_2025_2_12hr/metadata.json ADDED
@@ -0,0 +1,11 @@
 
 
 
 
 
 
 
 
 
 
 
 
1
+ {
2
+ "organism": "Mus musculus",
3
+ "tissue": "Kidney",
4
+ "disease": "Cold Ischemia Injury",
5
+ "sex": "male",
6
+ "age": "7-8 weeks",
7
+ "technology": "Visium",
8
+ "stain_type": "H&E",
9
+ "publication_doi": "10.1101/2025.05.25.654911",
10
+ "repository_id": "GEO (GSE268154)"
11
+ }
GSE268154/Singh_2025_2_12hr/qc_panel.png ADDED

Git LFS Details

  • SHA256: 360000ebd2acec1870458964220f3c6715dad9600b2de1f2b3f6a0660f3d08d7
  • Pointer size: 132 Bytes
  • Size of remote file: 1.3 MB
GSE268154/Singh_2025_2_12hr/spatial.h5ad ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:544a9c560caa687920d6df56073208df6e940d0ca27216d2c3fa7d7746fbee4b
3
+ size 151356248
GSE268154/Singh_2025_2_12hr/wsi.tif ADDED

Git LFS Details

  • SHA256: d3821f5275b625b660233bacdb90d729b7424b499738c5c03ad3732fefdd7875
  • Pointer size: 133 Bytes
  • Size of remote file: 11.9 MB
GSE268154/Singh_2025_3_24hr/metadata.json ADDED
@@ -0,0 +1,11 @@
 
 
 
 
 
 
 
 
 
 
 
 
1
+ {
2
+ "organism": "Mus musculus",
3
+ "tissue": "Kidney",
4
+ "disease": "Cold Ischemia Injury",
5
+ "sex": "male",
6
+ "age": "7-8 weeks",
7
+ "technology": "Visium",
8
+ "stain_type": "H&E",
9
+ "publication_doi": "10.1101/2025.05.25.654911",
10
+ "repository_id": "GEO (GSE268154)"
11
+ }
GSE268154/Singh_2025_3_24hr/qc_panel.png ADDED

Git LFS Details

  • SHA256: 3cc4516758df3a41ecc11ff84a55177bef0de4abac70cbcc4470cd2dbe4340d1
  • Pointer size: 132 Bytes
  • Size of remote file: 1.27 MB
GSE268154/Singh_2025_3_24hr/spatial.h5ad ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:7e991929952d211fc28bd79bf85766f44da834694ca484bc83d08aadb678662f
3
+ size 127506693
GSE268154/Singh_2025_3_24hr/wsi.tif ADDED

Git LFS Details

  • SHA256: 93351be05edd2c574743b433dd915d20da7ef30a020458f891a3b469750f1c67
  • Pointer size: 133 Bytes
  • Size of remote file: 12 MB
GSE268154/Singh_2025_4_48hr/metadata.json ADDED
@@ -0,0 +1,11 @@
 
 
 
 
 
 
 
 
 
 
 
 
1
+ {
2
+ "organism": "Mus musculus",
3
+ "tissue": "Kidney",
4
+ "disease": "Cold Ischemia Injury",
5
+ "sex": "male",
6
+ "age": "7-8 weeks",
7
+ "technology": "Visium",
8
+ "stain_type": "H&E",
9
+ "publication_doi": "10.1101/2025.05.25.654911",
10
+ "repository_id": "GEO (GSE268154)"
11
+ }
GSE268154/Singh_2025_4_48hr/qc_panel.png ADDED

Git LFS Details

  • SHA256: f2188196cb8afc810e2ef280e4861f2aaec73d5bce7836cd76dec55abb851a5c
  • Pointer size: 132 Bytes
  • Size of remote file: 1.26 MB
GSE268154/Singh_2025_4_48hr/spatial.h5ad ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:ccb73287de3c3b035ce01bc7788c5123d606092029db3167947a81ffa8199885
3
+ size 101258073
GSE268154/Singh_2025_4_48hr/wsi.tif ADDED

Git LFS Details

  • SHA256: 9cf22da2870b93071a65517bee4416d4483e57dffe796cd7ad2efd14097a0e33
  • Pointer size: 133 Bytes
  • Size of remote file: 12 MB