Commit History

4 days ago

  1. Correction 2026-11-11: image removed from 9 misaligned HESRT samples⁠

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  2. Card: corrections of 2026-11-11 (12 samples replaced, 6 withdrawn), current counts, metadata v2.2.3

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  3. Correction 2026-11-11: 12 samples replaced by re-converted versions (GSE205707 x6, GSE275125 x4, GSM8933093, GSM5643203); 6 samples withdrawn (GSE298115 GSM9008651/GSM9008653, GSE244723 x4) - catalog, metadata v2.2.3, gene index

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  4. Correction 2026-11-11: 12 samples replaced by re-converted versions (GSE205707 x6, GSE275125 x4, GSM8933093, GSM5643203); 6 samples withdrawn (GSE298115 GSM9008651/GSM9008653, GSE244723 x4) - sample files

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6 days ago

  1. Metadata v2.2.2: most-used columns first (organ, disease, tissue, sample kind, organism, life stage, sex, platform); no value changed⁠

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  2. Card: metadata v2 as the default Dataset Viewer table; catalog kept as a second config⁠

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9 days ago

  1. Card: metadata v2.2.1 tag

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  2. Metadata v2.2.1: hand-corrected fields drop the model confidence; schema text; no label changed

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  3. Card: metadata v2.2 (tag metadata-v2.2-20261106, corrections from human review)

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  4. Metadata v2.2: corrections from human review (non-human-animal terms, culture life stage, sex from sample text, 10 manual corrections)

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10 days ago

  1. metadata v2.1 notes: assay_type of 6 ISS samples changed (correction of the changelog)

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  2. metadata v2.1 notes: assay_type of 6 ISS samples changed (correction of the changelog)

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  3. Metadata v2.1: one name per assay; exact float values from the release parquet; no annotation changed

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  4. Card: add curated sample metadata v2 section (metadata/v2, tag metadata-v2-20261105)

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  5. Add curated sample metadata v2 (sda-sample-metadata-2): organ, UBERON tissue, MONDO disease, sample kind, life stage, species taxonomy, assay names; data files unchanged; see metadata/v2/README.md

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11 days ago

  1. Card: heatmap with separated human column; consistent ST (legacy) label

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  2. Dataset card: starter pack with 8 cell-resolution H&E samples

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12 days ago

  1. Starter pack: swap in 5 cell-resolution Visium H&E samples⁠

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  2. Dataset card: no-login starter pack section and gallery

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  3. Add the 88-sample starter pack (no login)⁠

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  4. Dataset card: fix stain wording

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  5. Dataset card: illustrated walkthrough (organ coverage, example samples, images, sample size)⁠

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  6. Dataset card: reader-tested rewrite (tissue table, no-code/R/Python paths, splits, access)⁠

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  7. Dataset card: point to the spatial-data-agent-db toolkit⁠

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  8. Add measured-feature index for release v1.0.0-20261025⁠

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20 days ago

  1. Simplify figures and move explanations into the dataset card

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21 days ago

  1. Illustrate dataset card with source-bound scientific figures

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  2. Publish source-bound public metadata catalog

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  3. initial commit

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