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rossi_2021 / scripts

658 MB

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4 contributors

History: 11 commits

Chase Mateusiak

updating scripts

0e35c0f about 1 month ago

data
updating peak calls such that no peak promoters are included with NA; adding readme to scripts/data where macs3 output is now stored about 1 month ago
ChExMix_Peak_Filter_List_190612_sgd.bed

10.9 kB
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bam_lookup.txt

75 kB
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control_lookup.txt

1.01 kB
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count_tags.sh

2.11 kB
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genomecov_to_annotated_features.R

34.3 kB
adding additional promoter sets 5 months ago
nextflow_config.conf

924 Bytes
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nextflow_params.json

45.9 kB
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nfcore_chipseq_full_samplesheet.csv

210 kB
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parse_pugh_genomecov_5p.R

4.78 kB
major reorganization and reprocessing. scripts added 10 months ago
parse_rossi_filtered_peaks.R

8.71 kB
adding yep and macs peaks 4 months ago
parse_yeastepigenome_sample_data.R

4.43 kB
major reorganization and reprocessing. scripts added 10 months ago
rossi_peak_analysis.R

21.6 kB
updating scripts about 1 month ago