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Upload CylinderKnMa\Kn1p00\simulation2353_Kn1p00Ma2p2\log.sparta with huggingface_hub

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  1. CylinderKnMa//Kn1p00//simulation2353_Kn1p00Ma2p2//log.sparta +318 -0
CylinderKnMa//Kn1p00//simulation2353_Kn1p00Ma2p2//log.sparta ADDED
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1
+ SPARTA (4 Sep 2024)
2
+ Running on 128 MPI task(s)
3
+ variable BZ equal 1.380649E-23
4
+ variable PI equal 3.1415926536
5
+ variable molecular_mass equal 6.63E-26
6
+ variable molecular_diameter equal 4.17E-10
7
+ variable gamma equal 1.666666667
8
+ variable R equal ${BZ}/${molecular_mass}
9
+ variable R equal 1.380649e-23/${molecular_mass}
10
+ variable R equal 1.380649e-23/6.63e-26
11
+ variable L equal 1.0
12
+ variable xmin equal -5.0
13
+ variable xmax equal 6.0
14
+ variable ymin equal -5.0
15
+ variable ymax equal 5.0
16
+ variable Kn equal 1.0
17
+ variable Ma equal 2.2
18
+ variable To equal 273.0
19
+ variable Tb equal 273.0
20
+ variable theta equal 0.0
21
+ variable mfp equal ${Kn}*${L}
22
+ variable mfp equal 1*${L}
23
+ variable mfp equal 1*1
24
+ variable cpmfp equal 4
25
+ variable nden equal 1.0/sqrt(2.0)/${PI}/${molecular_diameter}/${molecular_diameter}/(${mfp}/${cpmfp}*${Kn})
26
+ variable nden equal 1.0/sqrt(2.0)/3.1415926536/${molecular_diameter}/${molecular_diameter}/(${mfp}/${cpmfp}*${Kn})
27
+ variable nden equal 1.0/sqrt(2.0)/3.1415926536/4.17e-10/${molecular_diameter}/(${mfp}/${cpmfp}*${Kn})
28
+ variable nden equal 1.0/sqrt(2.0)/3.1415926536/4.17e-10/4.17e-10/(${mfp}/${cpmfp}*${Kn})
29
+ variable nden equal 1.0/sqrt(2.0)/3.1415926536/4.17e-10/4.17e-10/(1/${cpmfp}*${Kn})
30
+ variable nden equal 1.0/sqrt(2.0)/3.1415926536/4.17e-10/4.17e-10/(1/4*${Kn})
31
+ variable nden equal 1.0/sqrt(2.0)/3.1415926536/4.17e-10/4.17e-10/(1/4*1)
32
+ variable sos equal sqrt(${gamma}*${R}*${To})
33
+ variable sos equal sqrt(1.666666667*${R}*${To})
34
+ variable sos equal sqrt(1.666666667*208.242684766214*${To})
35
+ variable sos equal sqrt(1.666666667*208.242684766214*273)
36
+ variable vo equal ${Ma}*${sos}
37
+ variable vo equal 2.2*${sos}
38
+ variable vo equal 2.2*307.815564238681
39
+ variable vx equal ${vo}*cos(${theta}*2*PI/360)
40
+ variable vx equal 677.194241325098*cos(${theta}*2*PI/360)
41
+ variable vx equal 677.194241325098*cos(0*2*PI/360)
42
+ variable vy equal ${vo}*sin(${theta}*2*PI/360)
43
+ variable vy equal 677.194241325098*sin(${theta}*2*PI/360)
44
+ variable vy equal 677.194241325098*sin(0*2*PI/360)
45
+ variable ppc equal 30
46
+ variable xncells equal (${xmax}-${xmin})/${mfp}*${cpmfp}
47
+ variable xncells equal (6-${xmin})/${mfp}*${cpmfp}
48
+ variable xncells equal (6--5)/${mfp}*${cpmfp}
49
+ variable xncells equal (6--5)/1*${cpmfp}
50
+ variable xncells equal (6--5)/1*4
51
+ variable yncells equal (${ymax}-${ymin})/${mfp}*${cpmfp}
52
+ variable yncells equal (5-${ymin})/${mfp}*${cpmfp}
53
+ variable yncells equal (5--5)/${mfp}*${cpmfp}
54
+ variable yncells equal (5--5)/1*${cpmfp}
55
+ variable yncells equal (5--5)/1*4
56
+ variable Fnum equal ${nden}*(${xmax}-${xmin})*(${ymax}-${ymin})/${ppc}/${xncells}/${yncells}
57
+ variable Fnum equal 5.17753461204666e+18*(${xmax}-${xmin})*(${ymax}-${ymin})/${ppc}/${xncells}/${yncells}
58
+ variable Fnum equal 5.17753461204666e+18*(6-${xmin})*(${ymax}-${ymin})/${ppc}/${xncells}/${yncells}
59
+ variable Fnum equal 5.17753461204666e+18*(6--5)*(${ymax}-${ymin})/${ppc}/${xncells}/${yncells}
60
+ variable Fnum equal 5.17753461204666e+18*(6--5)*(5-${ymin})/${ppc}/${xncells}/${yncells}
61
+ variable Fnum equal 5.17753461204666e+18*(6--5)*(5--5)/${ppc}/${xncells}/${yncells}
62
+ variable Fnum equal 5.17753461204666e+18*(6--5)*(5--5)/30/${xncells}/${yncells}
63
+ variable Fnum equal 5.17753461204666e+18*(6--5)*(5--5)/30/44/${yncells}
64
+ variable Fnum equal 5.17753461204666e+18*(6--5)*(5--5)/30/44/40
65
+ variable tstep equal (-${xmin}+${xmax})/${vx}/${xncells}/10/4
66
+ variable tstep equal (--5+${xmax})/${vx}/${xncells}/10/4
67
+ variable tstep equal (--5+6)/${vx}/${xncells}/10/4
68
+ variable tstep equal (--5+6)/677.194241325098/${xncells}/10/4
69
+ variable tstep equal (--5+6)/677.194241325098/44/10/4
70
+ variable nave equal 10000
71
+ variable noutput equal 300000
72
+ clear
73
+ Running on 128 MPI task(s)
74
+ shell mkdir output
75
+ shell mkdir grid
76
+ shell mkdir surf
77
+ seed 7
78
+ dimension 2
79
+ global nrho ${nden}
80
+ global nrho 5.17753461204666e+18
81
+ global fnum ${Fnum}
82
+ global fnum 1.07865304417639e+16
83
+ timestep ${tstep}
84
+ timestep 9.22925745465633e-06
85
+ global gridcut 1.0 particle/reorder 100 comm/sort yes
86
+ region 1 cylinder z 0.0 0.0 3.50 -0.5 0.5
87
+ region 2 cylinder z 0.0 0.0 2.00 -0.5 0.5
88
+ region 3 cylinder z 0.0 0.0 0.80 -0.5 0.5
89
+ boundary o o p
90
+ create_box ${xmin} ${xmax} ${ymin} ${ymax} -0.5 0.5
91
+ create_box -5 ${xmax} ${ymin} ${ymax} -0.5 0.5
92
+ create_box -5 6 ${ymin} ${ymax} -0.5 0.5
93
+ create_box -5 6 -5 ${ymax} -0.5 0.5
94
+ create_box -5 6 -5 5 -0.5 0.5
95
+ Created orthogonal box = (-5 -5 -0.5) to (6 5 0.5)
96
+ create_grid ${xncells} ${yncells} 1 levels 4 region 2 1 2 2 1 region 3 2 2 2 1 region 4 3 2 2 1 clump xyz
97
+ create_grid 44 ${yncells} 1 levels 4 region 2 1 2 2 1 region 3 2 2 2 1 region 4 3 2 2 1 clump xyz
98
+ create_grid 44 40 1 levels 4 region 2 1 2 2 1 region 3 2 2 2 1 region 4 3 2 2 1 clump xyz
99
+ Created 8048 child grid cells
100
+ CPU time = 0.0810881 secs
101
+ create/ghost percent = 1.33209 98.6679
102
+ balance_grid rcb cell
103
+ Balance grid migrated 8026 cells
104
+ CPU time = 0.0721522 secs
105
+ reassign/sort/migrate/ghost percent = 83.7085 0.0363676 8.91092 7.3442
106
+ species gas.species Ar
107
+ mixture air Ar frac 1.0
108
+ mixture air Ar vstream ${vx} ${vy} 0.0 temp ${To}
109
+ mixture air Ar vstream 677.194241325098 ${vy} 0.0 temp ${To}
110
+ mixture air Ar vstream 677.194241325098 0 0.0 temp ${To}
111
+ mixture air Ar vstream 677.194241325098 0 0.0 temp 273
112
+ collide vss air gas.vhs
113
+ collide_modify vremax 100 yes remain no nearcp yes 10
114
+ read_surf cylinder.surf
115
+ 200 lines
116
+ -0.5 0.5 xlo xhi
117
+ -0.5 0.5 ylo yhi
118
+ 0 0 zlo zhi
119
+ 0.0157073 min line length
120
+ 132 0 = cells overlapping surfs, overlap cells with unmarked corner pts
121
+ 7184 732 132 = cells outside/inside/overlapping surfs
122
+ 132 = surf cells with 1,2,etc splits
123
+ 109.215 109.215 = cell-wise and global flow volume
124
+ CPU time = 0.111112 secs
125
+ read/check/sort/surf2grid/ghost/inout/particle percent = 32.9076 39.6521 2.46779 19.3184 5.65402 5.25158 0.0609206
126
+ surf2grid time = 0.0214651 secs
127
+ map/comm1/comm2/comm3/comm4/split percent = 12.4106 25.9493 2.49092 3.21316 12.7519 7.24625
128
+ surf_collide 1 diffuse 273.0 1.0
129
+ surf_modify all collide 1
130
+ fix in emit/face air xlo ylo yhi
131
+ balance_grid rcb cell
132
+ Balance grid migrated 506 cells
133
+ CPU time = 0.0150661 secs
134
+ reassign/sort/migrate/ghost percent = 17.9152 0.205097 53.9504 27.9293
135
+ create_particles air n 0
136
+ Created 52423 particles
137
+ CPU time = 0.00846634 secs
138
+ stats 10000
139
+ stats_style step cpu np nattempt ncoll nscoll npave nscollave
140
+ run 200000
141
+ Memory usage per proc in Mbytes:
142
+ particles (ave,min,max) = 1.59521 0 1.6875
143
+ grid (ave,min,max) = 1.51379 1.51379 1.51379
144
+ surf (ave,min,max) = 0.0205994 0.0205994 0.0205994
145
+ total (ave,min,max) = 3.12961 1.53439 3.22189
146
+ Step CPU Np Natt Ncoll Nscoll Npave Nscollave
147
+ 0 0 52423 0 0 0 0 0
148
+ 10000 5.5723934 58189 632 532 4 56889.124 3.2569
149
+ 20000 11.275275 58501 614 501 3 57668.626 3.27945
150
+ 30000 16.163407 58151 632 534 5 57893.379 3.2848
151
+ 40000 21.677809 58057 613 502 6 57995.603 3.29085
152
+ 50000 27.014951 58098 566 488 2 58056.447 3.28982
153
+ 60000 31.710414 58207 628 519 6 58090.944 3.2960333
154
+ 70000 36.75349 58602 616 517 4 58149.185 3.2975286
155
+ 80000 41.859356 58242 602 471 5 58189.857 3.30375
156
+ 90000 46.751872 58253 631 524 4 58207.773 3.3045111
157
+ 100000 51.442268 58510 607 503 1 58226.839 3.31036
158
+ 110000 56.994731 58696 630 531 5 58238.124 3.3089909
159
+ 120000 61.680531 58408 597 491 4 58268.271 3.3060667
160
+ 130000 67.363745 58564 624 527 9 58281.765 3.3090692
161
+ 140000 73.020527 58183 611 508 1 58294.14 3.3077929
162
+ 150000 77.800362 58448 648 528 1 58301.489 3.30846
163
+ 160000 83.768473 58627 618 522 4 58305.573 3.3091563
164
+ 170000 88.617474 57884 589 482 1 58317.585 3.3075118
165
+ 180000 93.46066 58681 634 532 2 58323.475 3.3083778
166
+ 190000 98.607434 58196 614 515 3 58328.568 3.3077474
167
+ 200000 103.46537 58362 616 505 3 58332.954 3.306705
168
+ Loop time of 103.466 on 128 procs for 200000 steps with 58362 particles
169
+
170
+ MPI task timing breakdown:
171
+ Section | min time | avg time | max time |%varavg| %total
172
+ ---------------------------------------------------------------
173
+ Move | 0.021758 | 1.4845 | 6.7901 | 138.9 | 1.43
174
+ Coll | 0.056297 | 0.91203 | 3.945 | 91.0 | 0.88
175
+ Sort | 0.025999 | 0.19618 | 0.9009 | 47.5 | 0.19
176
+ Comm | 45.451 | 78.955 | 89.094 | 96.6 | 76.31
177
+ Modify | 0.016229 | 0.054914 | 0.8367 | 51.3 | 0.05
178
+ Output | 0.004119 | 0.0047251 | 0.0072423 | 0.9 | 0.00
179
+ Other | | 21.86 | | | 21.13
180
+
181
+ Particle moves = 11666590703 (11.7B)
182
+ Cells touched = 12254905033 (12.3B)
183
+ Particle comms = 79751155 (79.8M)
184
+ Boundary collides = 0 (0K)
185
+ Boundary exits = 7849234 (7.85M)
186
+ SurfColl checks = 35876691 (35.9M)
187
+ SurfColl occurs = 661341 (0.661M)
188
+ Surf reactions = 0 (0K)
189
+ Collide attempts = 129117406 (129M)
190
+ Collide occurs = 102870812 (103M)
191
+ Reactions = 0 (0K)
192
+ Particles stuck = 0
193
+ Axisymm bad moves = 0
194
+
195
+ Particle-moves/CPUsec/proc: 880922
196
+ Particle-moves/step: 58333
197
+ Cell-touches/particle/step: 1.05043
198
+ Particle comm iterations/step: 1
199
+ Particle fraction communicated: 0.00683586
200
+ Particle fraction colliding with boundary: 0
201
+ Particle fraction exiting boundary: 0.000672796
202
+ Surface-checks/particle/step: 0.00307516
203
+ Surface-collisions/particle/step: 5.66867e-05
204
+ Surf-reactions/particle/step: 0
205
+ Collision-attempts/particle/step: 0.0110673
206
+ Collisions/particle/step: 0.00881756
207
+ Reactions/particle/step: 0
208
+
209
+ Particles: 455.953 ave 2297 max 0 min
210
+ Histogram: 74 14 14 2 4 6 4 4 2 4
211
+ Cells: 62.875 ave 64 max 62 min
212
+ Histogram: 17 0 0 0 0 110 0 0 0 1
213
+ GhostCell: 1715.82 ave 3060 max 124 min
214
+ Histogram: 18 12 8 12 17 4 7 4 16 30
215
+ EmptyCell: 106.516 ave 174 max 30 min
216
+ Histogram: 5 5 16 9 14 19 28 19 11 2
217
+ Surfs: 200 ave 200 max 200 min
218
+ Histogram: 128 0 0 0 0 0 0 0 0 0
219
+ GhostSurf: 0 ave 0 max 0 min
220
+ Histogram: 128 0 0 0 0 0 0 0 0 0
221
+ compute 1 grid all air n nrho massrho u v w
222
+ compute 2 grid all air trot
223
+ compute 3 tvib/grid all air
224
+ compute 4 thermal/grid all air press temp
225
+ fix 1 ave/grid all 1 ${nave} ${nave} c_1[*] c_4[*] c_2[*] c_3[*] ave running
226
+ fix 1 ave/grid all 1 10000 ${nave} c_1[*] c_4[*] c_2[*] c_3[*] ave running
227
+ fix 1 ave/grid all 1 10000 10000 c_1[*] c_4[*] c_2[*] c_3[*] ave running
228
+ dump 1 grid all ${noutput} output/grid.*.dat id xc yc f_1[*]
229
+ dump 1 grid all 300000 output/grid.*.dat id xc yc f_1[*]
230
+ dump_modify 1 format float %12.5g
231
+ compute 5 surf all air n press px py shx shy fx fy etot erot evib
232
+ fix 2 ave/surf all 1 ${nave} ${nave} c_5[*] ave running
233
+ fix 2 ave/surf all 1 10000 ${nave} c_5[*] ave running
234
+ fix 2 ave/surf all 1 10000 10000 c_5[*] ave running
235
+ dump 2 surf all ${noutput} output/surf.*.dat id v1x v1y v2x v2y f_2[*]
236
+ dump 2 surf all 300000 output/surf.*.dat id v1x v1y v2x v2y f_2[*]
237
+ dump_modify 2 format float %12.5g
238
+ compute 6 lambda/grid f_1[2] f_1[8] Ar kx
239
+ dump 3 grid all ${noutput} output/lambdakn.*.dat id xc yc c_6[*]
240
+ dump 3 grid all 300000 output/lambdakn.*.dat id xc yc c_6[*]
241
+ dump_modify 3 format float %12.5g
242
+ run 100000
243
+ Memory usage per proc in Mbytes:
244
+ particles (ave,min,max) = 1.6084 0 1.6875
245
+ grid (ave,min,max) = 1.51379 1.51379 1.51379
246
+ surf (ave,min,max) = 0.0205994 0.0205994 0.0205994
247
+ total (ave,min,max) = 3.16416 1.55571 3.24371
248
+ Step CPU Np Natt Ncoll Nscoll Npave Nscollave
249
+ 200000 0 58362 616 505 0 0 0
250
+ 210000 5.4865381 58434 634 509 2 58397.735 3.3201
251
+ 220000 11.658246 58212 596 499 4 58370.836 3.31115
252
+ 230000 17.106918 58364 582 491 4 58360.962 3.3080667
253
+ 240000 22.606711 58512 606 512 4 58389.07 3.314925
254
+ 250000 29.551499 58326 603 504 6 58385.884 3.31294
255
+ 260000 35.027182 58492 640 525 5 58395.4 3.3117167
256
+ 270000 41.824548 58423 613 506 6 58406.927 3.3132571
257
+ 280000 47.177331 58204 627 519 3 58394.848 3.3138375
258
+ 290000 52.798937 58856 610 503 4 58382.065 3.3124778
259
+ 300000 58.580123 58627 658 550 4 58385.925 3.31002
260
+ Loop time of 58.5803 on 128 procs for 100000 steps with 58627 particles
261
+
262
+ MPI task timing breakdown:
263
+ Section | min time | avg time | max time |%varavg| %total
264
+ ---------------------------------------------------------------
265
+ Move | 0.010915 | 0.74544 | 3.3606 | 97.8 | 1.27
266
+ Coll | 0.027355 | 0.45942 | 1.9939 | 64.5 | 0.78
267
+ Sort | 0.013218 | 0.099067 | 0.44563 | 33.7 | 0.17
268
+ Comm | 22.704 | 39.499 | 44.58 | 67.9 | 67.43
269
+ Modify | 0.34454 | 2.0357 | 8.7393 | 151.2 | 3.48
270
+ Output | 0.019686 | 0.021325 | 0.025175 | 0.8 | 0.04
271
+ Other | | 15.72 | | | 26.84
272
+
273
+ Particle moves = 5838592531 (5.84B)
274
+ Cells touched = 6132953015 (6.13B)
275
+ Particle comms = 39912169 (39.9M)
276
+ Boundary collides = 0 (0K)
277
+ Boundary exits = 3927785 (3.93M)
278
+ SurfColl checks = 17925058 (17.9M)
279
+ SurfColl occurs = 331002 (0.331M)
280
+ Surf reactions = 0 (0K)
281
+ Collide attempts = 64708599 (64.7M)
282
+ Collide occurs = 51560423 (51.6M)
283
+ Reactions = 0 (0K)
284
+ Particles stuck = 0
285
+ Axisymm bad moves = 0
286
+
287
+ Particle-moves/CPUsec/proc: 778657
288
+ Particle-moves/step: 58385.9
289
+ Cell-touches/particle/step: 1.05042
290
+ Particle comm iterations/step: 1
291
+ Particle fraction communicated: 0.00683592
292
+ Particle fraction colliding with boundary: 0
293
+ Particle fraction exiting boundary: 0.000672728
294
+ Surface-checks/particle/step: 0.0030701
295
+ Surface-collisions/particle/step: 5.66921e-05
296
+ Surf-reactions/particle/step: 0
297
+ Collision-attempts/particle/step: 0.0110829
298
+ Collisions/particle/step: 0.00883097
299
+ Reactions/particle/step: 0
300
+
301
+ Particles: 458.023 ave 2329 max 0 min
302
+ Histogram: 74 17 9 4 4 6 4 4 2 4
303
+ Cells: 62.875 ave 64 max 62 min
304
+ Histogram: 17 0 0 0 0 110 0 0 0 1
305
+ GhostCell: 1715.82 ave 3060 max 124 min
306
+ Histogram: 18 12 8 12 17 4 7 4 16 30
307
+ EmptyCell: 106.516 ave 174 max 30 min
308
+ Histogram: 5 5 16 9 14 19 28 19 11 2
309
+ Surfs: 200 ave 200 max 200 min
310
+ Histogram: 128 0 0 0 0 0 0 0 0 0
311
+ GhostSurf: 0 ave 0 max 0 min
312
+ Histogram: 128 0 0 0 0 0 0 0 0 0
313
+ write_grid grid/final-grid.dat
314
+ grid cells = 8048
315
+ CPU time = 0.00184902 secs
316
+ write_surf surf/geom.surf
317
+ surf elements = 200
318
+ CPU time = 0.00152257 secs