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Upload CylinderKnMa\Kn1p00\simulation2352_Kn1p00Ma2p1\log.sparta with huggingface_hub

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  1. CylinderKnMa//Kn1p00//simulation2352_Kn1p00Ma2p1//log.sparta +318 -0
CylinderKnMa//Kn1p00//simulation2352_Kn1p00Ma2p1//log.sparta ADDED
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1
+ SPARTA (4 Sep 2024)
2
+ Running on 128 MPI task(s)
3
+ variable BZ equal 1.380649E-23
4
+ variable PI equal 3.1415926536
5
+ variable molecular_mass equal 6.63E-26
6
+ variable molecular_diameter equal 4.17E-10
7
+ variable gamma equal 1.666666667
8
+ variable R equal ${BZ}/${molecular_mass}
9
+ variable R equal 1.380649e-23/${molecular_mass}
10
+ variable R equal 1.380649e-23/6.63e-26
11
+ variable L equal 1.0
12
+ variable xmin equal -5.0
13
+ variable xmax equal 6.0
14
+ variable ymin equal -5.0
15
+ variable ymax equal 5.0
16
+ variable Kn equal 1.0
17
+ variable Ma equal 2.1
18
+ variable To equal 273.0
19
+ variable Tb equal 273.0
20
+ variable theta equal 0.0
21
+ variable mfp equal ${Kn}*${L}
22
+ variable mfp equal 1*${L}
23
+ variable mfp equal 1*1
24
+ variable cpmfp equal 4
25
+ variable nden equal 1.0/sqrt(2.0)/${PI}/${molecular_diameter}/${molecular_diameter}/(${mfp}/${cpmfp}*${Kn})
26
+ variable nden equal 1.0/sqrt(2.0)/3.1415926536/${molecular_diameter}/${molecular_diameter}/(${mfp}/${cpmfp}*${Kn})
27
+ variable nden equal 1.0/sqrt(2.0)/3.1415926536/4.17e-10/${molecular_diameter}/(${mfp}/${cpmfp}*${Kn})
28
+ variable nden equal 1.0/sqrt(2.0)/3.1415926536/4.17e-10/4.17e-10/(${mfp}/${cpmfp}*${Kn})
29
+ variable nden equal 1.0/sqrt(2.0)/3.1415926536/4.17e-10/4.17e-10/(1/${cpmfp}*${Kn})
30
+ variable nden equal 1.0/sqrt(2.0)/3.1415926536/4.17e-10/4.17e-10/(1/4*${Kn})
31
+ variable nden equal 1.0/sqrt(2.0)/3.1415926536/4.17e-10/4.17e-10/(1/4*1)
32
+ variable sos equal sqrt(${gamma}*${R}*${To})
33
+ variable sos equal sqrt(1.666666667*${R}*${To})
34
+ variable sos equal sqrt(1.666666667*208.242684766214*${To})
35
+ variable sos equal sqrt(1.666666667*208.242684766214*273)
36
+ variable vo equal ${Ma}*${sos}
37
+ variable vo equal 2.1*${sos}
38
+ variable vo equal 2.1*307.815564238681
39
+ variable vx equal ${vo}*cos(${theta}*2*PI/360)
40
+ variable vx equal 646.41268490123*cos(${theta}*2*PI/360)
41
+ variable vx equal 646.41268490123*cos(0*2*PI/360)
42
+ variable vy equal ${vo}*sin(${theta}*2*PI/360)
43
+ variable vy equal 646.41268490123*sin(${theta}*2*PI/360)
44
+ variable vy equal 646.41268490123*sin(0*2*PI/360)
45
+ variable ppc equal 30
46
+ variable xncells equal (${xmax}-${xmin})/${mfp}*${cpmfp}
47
+ variable xncells equal (6-${xmin})/${mfp}*${cpmfp}
48
+ variable xncells equal (6--5)/${mfp}*${cpmfp}
49
+ variable xncells equal (6--5)/1*${cpmfp}
50
+ variable xncells equal (6--5)/1*4
51
+ variable yncells equal (${ymax}-${ymin})/${mfp}*${cpmfp}
52
+ variable yncells equal (5-${ymin})/${mfp}*${cpmfp}
53
+ variable yncells equal (5--5)/${mfp}*${cpmfp}
54
+ variable yncells equal (5--5)/1*${cpmfp}
55
+ variable yncells equal (5--5)/1*4
56
+ variable Fnum equal ${nden}*(${xmax}-${xmin})*(${ymax}-${ymin})/${ppc}/${xncells}/${yncells}
57
+ variable Fnum equal 5.17753461204666e+18*(${xmax}-${xmin})*(${ymax}-${ymin})/${ppc}/${xncells}/${yncells}
58
+ variable Fnum equal 5.17753461204666e+18*(6-${xmin})*(${ymax}-${ymin})/${ppc}/${xncells}/${yncells}
59
+ variable Fnum equal 5.17753461204666e+18*(6--5)*(${ymax}-${ymin})/${ppc}/${xncells}/${yncells}
60
+ variable Fnum equal 5.17753461204666e+18*(6--5)*(5-${ymin})/${ppc}/${xncells}/${yncells}
61
+ variable Fnum equal 5.17753461204666e+18*(6--5)*(5--5)/${ppc}/${xncells}/${yncells}
62
+ variable Fnum equal 5.17753461204666e+18*(6--5)*(5--5)/30/${xncells}/${yncells}
63
+ variable Fnum equal 5.17753461204666e+18*(6--5)*(5--5)/30/44/${yncells}
64
+ variable Fnum equal 5.17753461204666e+18*(6--5)*(5--5)/30/44/40
65
+ variable tstep equal (-${xmin}+${xmax})/${vx}/${xncells}/10/4
66
+ variable tstep equal (--5+${xmax})/${vx}/${xncells}/10/4
67
+ variable tstep equal (--5+6)/${vx}/${xncells}/10/4
68
+ variable tstep equal (--5+6)/646.41268490123/${xncells}/10/4
69
+ variable tstep equal (--5+6)/646.41268490123/44/10/4
70
+ variable nave equal 10000
71
+ variable noutput equal 300000
72
+ clear
73
+ Running on 128 MPI task(s)
74
+ shell mkdir output
75
+ shell mkdir grid
76
+ shell mkdir surf
77
+ seed 7
78
+ dimension 2
79
+ global nrho ${nden}
80
+ global nrho 5.17753461204666e+18
81
+ global fnum ${Fnum}
82
+ global fnum 1.07865304417639e+16
83
+ timestep ${tstep}
84
+ timestep 9.66874590487806e-06
85
+ global gridcut 1.0 particle/reorder 100 comm/sort yes
86
+ region 1 cylinder z 0.0 0.0 3.50 -0.5 0.5
87
+ region 2 cylinder z 0.0 0.0 2.00 -0.5 0.5
88
+ region 3 cylinder z 0.0 0.0 0.80 -0.5 0.5
89
+ boundary o o p
90
+ create_box ${xmin} ${xmax} ${ymin} ${ymax} -0.5 0.5
91
+ create_box -5 ${xmax} ${ymin} ${ymax} -0.5 0.5
92
+ create_box -5 6 ${ymin} ${ymax} -0.5 0.5
93
+ create_box -5 6 -5 ${ymax} -0.5 0.5
94
+ create_box -5 6 -5 5 -0.5 0.5
95
+ Created orthogonal box = (-5 -5 -0.5) to (6 5 0.5)
96
+ create_grid ${xncells} ${yncells} 1 levels 4 region 2 1 2 2 1 region 3 2 2 2 1 region 4 3 2 2 1 clump xyz
97
+ create_grid 44 ${yncells} 1 levels 4 region 2 1 2 2 1 region 3 2 2 2 1 region 4 3 2 2 1 clump xyz
98
+ create_grid 44 40 1 levels 4 region 2 1 2 2 1 region 3 2 2 2 1 region 4 3 2 2 1 clump xyz
99
+ Created 8048 child grid cells
100
+ CPU time = 0.0606997 secs
101
+ create/ghost percent = 2.32697 97.673
102
+ balance_grid rcb cell
103
+ Balance grid migrated 8026 cells
104
+ CPU time = 0.0702512 secs
105
+ reassign/sort/migrate/ghost percent = 83.993 0.0368392 9.34608 6.62409
106
+ species gas.species Ar
107
+ mixture air Ar frac 1.0
108
+ mixture air Ar vstream ${vx} ${vy} 0.0 temp ${To}
109
+ mixture air Ar vstream 646.41268490123 ${vy} 0.0 temp ${To}
110
+ mixture air Ar vstream 646.41268490123 0 0.0 temp ${To}
111
+ mixture air Ar vstream 646.41268490123 0 0.0 temp 273
112
+ collide vss air gas.vhs
113
+ collide_modify vremax 100 yes remain no nearcp yes 10
114
+ read_surf cylinder.surf
115
+ 200 lines
116
+ -0.5 0.5 xlo xhi
117
+ -0.5 0.5 ylo yhi
118
+ 0 0 zlo zhi
119
+ 0.0157073 min line length
120
+ 132 0 = cells overlapping surfs, overlap cells with unmarked corner pts
121
+ 7184 732 132 = cells outside/inside/overlapping surfs
122
+ 132 = surf cells with 1,2,etc splits
123
+ 109.215 109.215 = cell-wise and global flow volume
124
+ CPU time = 0.127528 secs
125
+ read/check/sort/surf2grid/ghost/inout/particle percent = 39.2079 30.8392 2.10668 23.9536 3.89259 4.77382 0.0608809
126
+ surf2grid time = 0.0305474 secs
127
+ map/comm1/comm2/comm3/comm4/split percent = 9.11318 17.7559 1.66934 1.30532 8.94459 35.9343
128
+ surf_collide 1 diffuse 273.0 1.0
129
+ surf_modify all collide 1
130
+ fix in emit/face air xlo ylo yhi
131
+ balance_grid rcb cell
132
+ Balance grid migrated 506 cells
133
+ CPU time = 0.0144728 secs
134
+ reassign/sort/migrate/ghost percent = 16.0318 0.183033 58.9894 24.7958
135
+ create_particles air n 0
136
+ Created 52423 particles
137
+ CPU time = 0.00970091 secs
138
+ stats 10000
139
+ stats_style step cpu np nattempt ncoll nscoll npave nscollave
140
+ run 200000
141
+ Memory usage per proc in Mbytes:
142
+ particles (ave,min,max) = 1.59521 0 1.6875
143
+ grid (ave,min,max) = 1.51379 1.51379 1.51379
144
+ surf (ave,min,max) = 0.0205994 0.0205994 0.0205994
145
+ total (ave,min,max) = 3.12961 1.53439 3.22189
146
+ Step CPU Np Natt Ncoll Nscoll Npave Nscollave
147
+ 0 0 52423 0 0 0 0 0
148
+ 10000 5.1875333 58525 659 560 3 56878.931 3.2272
149
+ 20000 10.889031 58540 624 511 5 57598.085 3.23915
150
+ 30000 16.051423 58234 666 549 4 57797.825 3.2378667
151
+ 40000 21.056105 58211 621 517 3 57918.756 3.2419
152
+ 50000 25.785233 58060 641 535 5 58003.306 3.24726
153
+ 60000 31.628815 57787 647 531 4 58024.724 3.2474333
154
+ 70000 37.217031 58394 655 555 1 58070.916 3.2492286
155
+ 80000 42.265214 57972 598 495 4 58108.741 3.2540875
156
+ 90000 47.442975 58211 637 535 2 58118.325 3.2547444
157
+ 100000 52.313411 58342 690 568 3 58131.719 3.2562
158
+ 110000 57.3342 58620 634 536 4 58148.746 3.2541364
159
+ 120000 62.641932 58164 630 534 4 58167.735 3.253725
160
+ 130000 67.913817 58138 637 529 4 58177.462 3.2552615
161
+ 140000 72.975469 58184 652 548 3 58181.449 3.25535
162
+ 150000 77.911046 58393 642 539 5 58191.16 3.2566267
163
+ 160000 82.767437 58396 682 562 1 58195.398 3.25635
164
+ 170000 87.647035 57815 654 549 4 58200.176 3.2568647
165
+ 180000 93.891381 58333 638 530 4 58207.204 3.2573056
166
+ 190000 98.941696 57959 650 550 5 58205.486 3.2582263
167
+ 200000 103.97531 58466 659 541 3 58211.73 3.25816
168
+ Loop time of 103.976 on 128 procs for 200000 steps with 58466 particles
169
+
170
+ MPI task timing breakdown:
171
+ Section | min time | avg time | max time |%varavg| %total
172
+ ---------------------------------------------------------------
173
+ Move | 0.022444 | 1.4867 | 6.6063 | 138.0 | 1.43
174
+ Coll | 0.057022 | 0.93137 | 3.8653 | 91.3 | 0.90
175
+ Sort | 0.02571 | 0.19914 | 0.8772 | 48.1 | 0.19
176
+ Comm | 45.533 | 78.662 | 88.886 | 97.2 | 75.65
177
+ Modify | 0.016759 | 0.055288 | 0.85668 | 51.5 | 0.05
178
+ Output | 0.0036374 | 0.0041852 | 0.0071852 | 1.0 | 0.00
179
+ Other | | 22.64 | | | 21.77
180
+
181
+ Particle moves = 11642346024 (11.6B)
182
+ Cells touched = 12235691399 (12.2B)
183
+ Particle comms = 80359000 (80.4M)
184
+ Boundary collides = 0 (0K)
185
+ Boundary exits = 7939223 (7.94M)
186
+ SurfColl checks = 34194514 (34.2M)
187
+ SurfColl occurs = 651632 (0.652M)
188
+ Surf reactions = 0 (0K)
189
+ Collide attempts = 134276740 (134M)
190
+ Collide occurs = 106799580 (107M)
191
+ Reactions = 0 (0K)
192
+ Particles stuck = 0
193
+ Axisymm bad moves = 0
194
+
195
+ Particle-moves/CPUsec/proc: 874780
196
+ Particle-moves/step: 58211.7
197
+ Cell-touches/particle/step: 1.05096
198
+ Particle comm iterations/step: 1
199
+ Particle fraction communicated: 0.0069023
200
+ Particle fraction colliding with boundary: 0
201
+ Particle fraction exiting boundary: 0.000681926
202
+ Surface-checks/particle/step: 0.00293708
203
+ Surface-collisions/particle/step: 5.59708e-05
204
+ Surf-reactions/particle/step: 0
205
+ Collision-attempts/particle/step: 0.0115335
206
+ Collisions/particle/step: 0.00917337
207
+ Reactions/particle/step: 0
208
+
209
+ Particles: 456.766 ave 2229 max 0 min
210
+ Histogram: 72 16 12 4 2 6 6 4 2 4
211
+ Cells: 62.875 ave 64 max 62 min
212
+ Histogram: 17 0 0 0 0 110 0 0 0 1
213
+ GhostCell: 1715.82 ave 3060 max 124 min
214
+ Histogram: 18 12 8 12 17 4 7 4 16 30
215
+ EmptyCell: 106.516 ave 174 max 30 min
216
+ Histogram: 5 5 16 9 14 19 28 19 11 2
217
+ Surfs: 200 ave 200 max 200 min
218
+ Histogram: 128 0 0 0 0 0 0 0 0 0
219
+ GhostSurf: 0 ave 0 max 0 min
220
+ Histogram: 128 0 0 0 0 0 0 0 0 0
221
+ compute 1 grid all air n nrho massrho u v w
222
+ compute 2 grid all air trot
223
+ compute 3 tvib/grid all air
224
+ compute 4 thermal/grid all air press temp
225
+ fix 1 ave/grid all 1 ${nave} ${nave} c_1[*] c_4[*] c_2[*] c_3[*] ave running
226
+ fix 1 ave/grid all 1 10000 ${nave} c_1[*] c_4[*] c_2[*] c_3[*] ave running
227
+ fix 1 ave/grid all 1 10000 10000 c_1[*] c_4[*] c_2[*] c_3[*] ave running
228
+ dump 1 grid all ${noutput} output/grid.*.dat id xc yc f_1[*]
229
+ dump 1 grid all 300000 output/grid.*.dat id xc yc f_1[*]
230
+ dump_modify 1 format float %12.5g
231
+ compute 5 surf all air n press px py shx shy fx fy etot erot evib
232
+ fix 2 ave/surf all 1 ${nave} ${nave} c_5[*] ave running
233
+ fix 2 ave/surf all 1 10000 ${nave} c_5[*] ave running
234
+ fix 2 ave/surf all 1 10000 10000 c_5[*] ave running
235
+ dump 2 surf all ${noutput} output/surf.*.dat id v1x v1y v2x v2y f_2[*]
236
+ dump 2 surf all 300000 output/surf.*.dat id v1x v1y v2x v2y f_2[*]
237
+ dump_modify 2 format float %12.5g
238
+ compute 6 lambda/grid f_1[2] f_1[8] Ar kx
239
+ dump 3 grid all ${noutput} output/lambdakn.*.dat id xc yc c_6[*]
240
+ dump 3 grid all 300000 output/lambdakn.*.dat id xc yc c_6[*]
241
+ dump_modify 3 format float %12.5g
242
+ run 100000
243
+ Memory usage per proc in Mbytes:
244
+ particles (ave,min,max) = 1.6084 0 1.6875
245
+ grid (ave,min,max) = 1.51379 1.51379 1.51379
246
+ surf (ave,min,max) = 0.0205994 0.0205994 0.0205994
247
+ total (ave,min,max) = 3.16416 1.55571 3.24371
248
+ Step CPU Np Natt Ncoll Nscoll Npave Nscollave
249
+ 200000 0 58466 659 541 0 0 0
250
+ 210000 5.6301757 58226 665 555 4 58259.07 3.2416
251
+ 220000 11.05947 58129 648 538 3 58267.639 3.2448
252
+ 230000 17.059018 57996 656 526 3 58260.335 3.2449667
253
+ 240000 22.514701 58204 651 549 4 58250.49 3.239225
254
+ 250000 28.748595 58707 640 542 3 58251.688 3.24466
255
+ 260000 34.498573 58155 637 518 1 58256.811 3.24825
256
+ 270000 39.970878 58312 632 522 2 58263.153 3.2506143
257
+ 280000 45.644956 58202 644 537 4 58250.975 3.2495375
258
+ 290000 51.954204 58423 630 509 4 58257.091 3.2502556
259
+ 300000 57.648741 58513 646 555 5 58262.184 3.252
260
+ Loop time of 57.6489 on 128 procs for 100000 steps with 58513 particles
261
+
262
+ MPI task timing breakdown:
263
+ Section | min time | avg time | max time |%varavg| %total
264
+ ---------------------------------------------------------------
265
+ Move | 0.011002 | 0.7429 | 3.2872 | 97.1 | 1.29
266
+ Coll | 0.027322 | 0.46738 | 1.9436 | 64.9 | 0.81
267
+ Sort | 0.013212 | 0.10077 | 0.44356 | 34.1 | 0.17
268
+ Comm | 22.691 | 39.143 | 44.395 | 68.7 | 67.90
269
+ Modify | 0.34704 | 2.0295 | 8.4574 | 150.6 | 3.52
270
+ Output | 0.019556 | 0.021103 | 0.024643 | 0.8 | 0.04
271
+ Other | | 15.14 | | | 26.27
272
+
273
+ Particle moves = 5826218428 (5.83B)
274
+ Cells touched = 6123032029 (6.12B)
275
+ Particle comms = 40195111 (40.2M)
276
+ Boundary collides = 0 (0K)
277
+ Boundary exits = 3973315 (3.97M)
278
+ SurfColl checks = 17071782 (17.1M)
279
+ SurfColl occurs = 325200 (0.325M)
280
+ Surf reactions = 0 (0K)
281
+ Collide attempts = 67247893 (67.2M)
282
+ Collide occurs = 53488652 (53.5M)
283
+ Reactions = 0 (0K)
284
+ Particles stuck = 0
285
+ Axisymm bad moves = 0
286
+
287
+ Particle-moves/CPUsec/proc: 789561
288
+ Particle-moves/step: 58262.2
289
+ Cell-touches/particle/step: 1.05094
290
+ Particle comm iterations/step: 1
291
+ Particle fraction communicated: 0.00689901
292
+ Particle fraction colliding with boundary: 0
293
+ Particle fraction exiting boundary: 0.000681972
294
+ Surface-checks/particle/step: 0.00293017
295
+ Surface-collisions/particle/step: 5.58167e-05
296
+ Surf-reactions/particle/step: 0
297
+ Collision-attempts/particle/step: 0.0115423
298
+ Collisions/particle/step: 0.00918068
299
+ Reactions/particle/step: 0
300
+
301
+ Particles: 457.133 ave 2250 max 0 min
302
+ Histogram: 74 14 12 4 2 7 5 4 2 4
303
+ Cells: 62.875 ave 64 max 62 min
304
+ Histogram: 17 0 0 0 0 110 0 0 0 1
305
+ GhostCell: 1715.82 ave 3060 max 124 min
306
+ Histogram: 18 12 8 12 17 4 7 4 16 30
307
+ EmptyCell: 106.516 ave 174 max 30 min
308
+ Histogram: 5 5 16 9 14 19 28 19 11 2
309
+ Surfs: 200 ave 200 max 200 min
310
+ Histogram: 128 0 0 0 0 0 0 0 0 0
311
+ GhostSurf: 0 ave 0 max 0 min
312
+ Histogram: 128 0 0 0 0 0 0 0 0 0
313
+ write_grid grid/final-grid.dat
314
+ grid cells = 8048
315
+ CPU time = 0.0018114 secs
316
+ write_surf surf/geom.surf
317
+ surf elements = 200
318
+ CPU time = 0.00160103 secs