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Upload CylinderKnMa\Kn1p00\simulation2351_Kn1p00Ma2p0\log.sparta with huggingface_hub

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  1. CylinderKnMa//Kn1p00//simulation2351_Kn1p00Ma2p0//log.sparta +318 -0
CylinderKnMa//Kn1p00//simulation2351_Kn1p00Ma2p0//log.sparta ADDED
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1
+ SPARTA (4 Sep 2024)
2
+ Running on 128 MPI task(s)
3
+ variable BZ equal 1.380649E-23
4
+ variable PI equal 3.1415926536
5
+ variable molecular_mass equal 6.63E-26
6
+ variable molecular_diameter equal 4.17E-10
7
+ variable gamma equal 1.666666667
8
+ variable R equal ${BZ}/${molecular_mass}
9
+ variable R equal 1.380649e-23/${molecular_mass}
10
+ variable R equal 1.380649e-23/6.63e-26
11
+ variable L equal 1.0
12
+ variable xmin equal -5.0
13
+ variable xmax equal 6.0
14
+ variable ymin equal -5.0
15
+ variable ymax equal 5.0
16
+ variable Kn equal 1.0
17
+ variable Ma equal 2.0
18
+ variable To equal 273.0
19
+ variable Tb equal 273.0
20
+ variable theta equal 0.0
21
+ variable mfp equal ${Kn}*${L}
22
+ variable mfp equal 1*${L}
23
+ variable mfp equal 1*1
24
+ variable cpmfp equal 4
25
+ variable nden equal 1.0/sqrt(2.0)/${PI}/${molecular_diameter}/${molecular_diameter}/(${mfp}/${cpmfp}*${Kn})
26
+ variable nden equal 1.0/sqrt(2.0)/3.1415926536/${molecular_diameter}/${molecular_diameter}/(${mfp}/${cpmfp}*${Kn})
27
+ variable nden equal 1.0/sqrt(2.0)/3.1415926536/4.17e-10/${molecular_diameter}/(${mfp}/${cpmfp}*${Kn})
28
+ variable nden equal 1.0/sqrt(2.0)/3.1415926536/4.17e-10/4.17e-10/(${mfp}/${cpmfp}*${Kn})
29
+ variable nden equal 1.0/sqrt(2.0)/3.1415926536/4.17e-10/4.17e-10/(1/${cpmfp}*${Kn})
30
+ variable nden equal 1.0/sqrt(2.0)/3.1415926536/4.17e-10/4.17e-10/(1/4*${Kn})
31
+ variable nden equal 1.0/sqrt(2.0)/3.1415926536/4.17e-10/4.17e-10/(1/4*1)
32
+ variable sos equal sqrt(${gamma}*${R}*${To})
33
+ variable sos equal sqrt(1.666666667*${R}*${To})
34
+ variable sos equal sqrt(1.666666667*208.242684766214*${To})
35
+ variable sos equal sqrt(1.666666667*208.242684766214*273)
36
+ variable vo equal ${Ma}*${sos}
37
+ variable vo equal 2*${sos}
38
+ variable vo equal 2*307.815564238681
39
+ variable vx equal ${vo}*cos(${theta}*2*PI/360)
40
+ variable vx equal 615.631128477362*cos(${theta}*2*PI/360)
41
+ variable vx equal 615.631128477362*cos(0*2*PI/360)
42
+ variable vy equal ${vo}*sin(${theta}*2*PI/360)
43
+ variable vy equal 615.631128477362*sin(${theta}*2*PI/360)
44
+ variable vy equal 615.631128477362*sin(0*2*PI/360)
45
+ variable ppc equal 30
46
+ variable xncells equal (${xmax}-${xmin})/${mfp}*${cpmfp}
47
+ variable xncells equal (6-${xmin})/${mfp}*${cpmfp}
48
+ variable xncells equal (6--5)/${mfp}*${cpmfp}
49
+ variable xncells equal (6--5)/1*${cpmfp}
50
+ variable xncells equal (6--5)/1*4
51
+ variable yncells equal (${ymax}-${ymin})/${mfp}*${cpmfp}
52
+ variable yncells equal (5-${ymin})/${mfp}*${cpmfp}
53
+ variable yncells equal (5--5)/${mfp}*${cpmfp}
54
+ variable yncells equal (5--5)/1*${cpmfp}
55
+ variable yncells equal (5--5)/1*4
56
+ variable Fnum equal ${nden}*(${xmax}-${xmin})*(${ymax}-${ymin})/${ppc}/${xncells}/${yncells}
57
+ variable Fnum equal 5.17753461204666e+18*(${xmax}-${xmin})*(${ymax}-${ymin})/${ppc}/${xncells}/${yncells}
58
+ variable Fnum equal 5.17753461204666e+18*(6-${xmin})*(${ymax}-${ymin})/${ppc}/${xncells}/${yncells}
59
+ variable Fnum equal 5.17753461204666e+18*(6--5)*(${ymax}-${ymin})/${ppc}/${xncells}/${yncells}
60
+ variable Fnum equal 5.17753461204666e+18*(6--5)*(5-${ymin})/${ppc}/${xncells}/${yncells}
61
+ variable Fnum equal 5.17753461204666e+18*(6--5)*(5--5)/${ppc}/${xncells}/${yncells}
62
+ variable Fnum equal 5.17753461204666e+18*(6--5)*(5--5)/30/${xncells}/${yncells}
63
+ variable Fnum equal 5.17753461204666e+18*(6--5)*(5--5)/30/44/${yncells}
64
+ variable Fnum equal 5.17753461204666e+18*(6--5)*(5--5)/30/44/40
65
+ variable tstep equal (-${xmin}+${xmax})/${vx}/${xncells}/10/4
66
+ variable tstep equal (--5+${xmax})/${vx}/${xncells}/10/4
67
+ variable tstep equal (--5+6)/${vx}/${xncells}/10/4
68
+ variable tstep equal (--5+6)/615.631128477362/${xncells}/10/4
69
+ variable tstep equal (--5+6)/615.631128477362/44/10/4
70
+ variable nave equal 10000
71
+ variable noutput equal 300000
72
+ clear
73
+ Running on 128 MPI task(s)
74
+ shell mkdir output
75
+ shell mkdir grid
76
+ shell mkdir surf
77
+ seed 7
78
+ dimension 2
79
+ global nrho ${nden}
80
+ global nrho 5.17753461204666e+18
81
+ global fnum ${Fnum}
82
+ global fnum 1.07865304417639e+16
83
+ timestep ${tstep}
84
+ timestep 1.0152183200122e-05
85
+ global gridcut 1.0 particle/reorder 100 comm/sort yes
86
+ region 1 cylinder z 0.0 0.0 3.50 -0.5 0.5
87
+ region 2 cylinder z 0.0 0.0 2.00 -0.5 0.5
88
+ region 3 cylinder z 0.0 0.0 0.80 -0.5 0.5
89
+ boundary o o p
90
+ create_box ${xmin} ${xmax} ${ymin} ${ymax} -0.5 0.5
91
+ create_box -5 ${xmax} ${ymin} ${ymax} -0.5 0.5
92
+ create_box -5 6 ${ymin} ${ymax} -0.5 0.5
93
+ create_box -5 6 -5 ${ymax} -0.5 0.5
94
+ create_box -5 6 -5 5 -0.5 0.5
95
+ Created orthogonal box = (-5 -5 -0.5) to (6 5 0.5)
96
+ create_grid ${xncells} ${yncells} 1 levels 4 region 2 1 2 2 1 region 3 2 2 2 1 region 4 3 2 2 1 clump xyz
97
+ create_grid 44 ${yncells} 1 levels 4 region 2 1 2 2 1 region 3 2 2 2 1 region 4 3 2 2 1 clump xyz
98
+ create_grid 44 40 1 levels 4 region 2 1 2 2 1 region 3 2 2 2 1 region 4 3 2 2 1 clump xyz
99
+ Created 8048 child grid cells
100
+ CPU time = 0.0604529 secs
101
+ create/ghost percent = 1.69048 98.3095
102
+ balance_grid rcb cell
103
+ Balance grid migrated 8026 cells
104
+ CPU time = 0.0692418 secs
105
+ reassign/sort/migrate/ghost percent = 83.853 0.0461282 9.64295 6.4579
106
+ species gas.species Ar
107
+ mixture air Ar frac 1.0
108
+ mixture air Ar vstream ${vx} ${vy} 0.0 temp ${To}
109
+ mixture air Ar vstream 615.631128477362 ${vy} 0.0 temp ${To}
110
+ mixture air Ar vstream 615.631128477362 0 0.0 temp ${To}
111
+ mixture air Ar vstream 615.631128477362 0 0.0 temp 273
112
+ collide vss air gas.vhs
113
+ collide_modify vremax 100 yes remain no nearcp yes 10
114
+ read_surf cylinder.surf
115
+ 200 lines
116
+ -0.5 0.5 xlo xhi
117
+ -0.5 0.5 ylo yhi
118
+ 0 0 zlo zhi
119
+ 0.0157073 min line length
120
+ 132 0 = cells overlapping surfs, overlap cells with unmarked corner pts
121
+ 7184 732 132 = cells outside/inside/overlapping surfs
122
+ 132 = surf cells with 1,2,etc splits
123
+ 109.215 109.215 = cell-wise and global flow volume
124
+ CPU time = 0.104827 secs
125
+ read/check/sort/surf2grid/ghost/inout/particle percent = 37.1911 35.1684 2.45082 20.4001 4.78952 5.30845 0.0671008
126
+ surf2grid time = 0.0213849 secs
127
+ map/comm1/comm2/comm3/comm4/split percent = 12.5728 25.945 2.51928 1.8988 12.5918 8.07022
128
+ surf_collide 1 diffuse 273.0 1.0
129
+ surf_modify all collide 1
130
+ fix in emit/face air xlo ylo yhi
131
+ balance_grid rcb cell
132
+ Balance grid migrated 506 cells
133
+ CPU time = 0.0142712 secs
134
+ reassign/sort/migrate/ghost percent = 16.3404 0.217292 57.94 25.5023
135
+ create_particles air n 0
136
+ Created 52423 particles
137
+ CPU time = 0.00907974 secs
138
+ stats 10000
139
+ stats_style step cpu np nattempt ncoll nscoll npave nscollave
140
+ run 200000
141
+ Memory usage per proc in Mbytes:
142
+ particles (ave,min,max) = 1.59521 0 1.6875
143
+ grid (ave,min,max) = 1.51379 1.51379 1.51379
144
+ surf (ave,min,max) = 0.0205994 0.0205994 0.0205994
145
+ total (ave,min,max) = 3.12961 1.53439 3.22189
146
+ Step CPU Np Natt Ncoll Nscoll Npave Nscollave
147
+ 0 0 52423 0 0 0 0 0
148
+ 10000 5.6757028 58215 666 543 4 56667.639 3.1507
149
+ 20000 10.543435 57995 674 548 1 57368.81 3.18305
150
+ 30000 15.673554 58237 643 536 4 57559.453 3.1736667
151
+ 40000 20.910634 57995 631 506 1 57684.518 3.1802
152
+ 50000 26.46408 57670 669 562 0 57773.419 3.18158
153
+ 60000 31.887949 57799 652 535 0 57811.901 3.1878167
154
+ 70000 36.789647 58281 687 568 2 57875.513 3.1930286
155
+ 80000 41.735778 57964 651 544 2 57916.663 3.197025
156
+ 90000 46.833781 57775 680 565 2 57931.912 3.1972889
157
+ 100000 52.358385 58044 708 584 1 57939.649 3.19713
158
+ 110000 57.235531 58320 666 542 3 57957.813 3.1992455
159
+ 120000 63.171953 57721 638 531 1 57977.33 3.20035
160
+ 130000 68.247941 58370 677 549 5 57996.081 3.2050308
161
+ 140000 73.220286 58003 681 567 4 57997.118 3.2051571
162
+ 150000 78.431978 57946 678 552 4 58001.182 3.2034
163
+ 160000 83.656697 58480 702 567 4 58008.897 3.2034625
164
+ 170000 89.244124 57923 669 551 0 58014.99 3.2032294
165
+ 180000 94.627778 58108 665 568 5 58019.163 3.2039778
166
+ 190000 99.395838 58191 668 554 4 58021.494 3.2036737
167
+ 200000 104.4951 58278 636 524 2 58026.395 3.205135
168
+ Loop time of 104.496 on 128 procs for 200000 steps with 58278 particles
169
+
170
+ MPI task timing breakdown:
171
+ Section | min time | avg time | max time |%varavg| %total
172
+ ---------------------------------------------------------------
173
+ Move | 0.022321 | 1.4833 | 6.4218 | 137.1 | 1.42
174
+ Coll | 0.056483 | 0.94188 | 3.7805 | 91.6 | 0.90
175
+ Sort | 0.025161 | 0.19786 | 0.8442 | 47.3 | 0.19
176
+ Comm | 43.226 | 78.84 | 89.627 | 100.8 | 75.45
177
+ Modify | 0.015987 | 0.055562 | 0.85741 | 51.5 | 0.05
178
+ Output | 0.0048894 | 0.0054537 | 0.0081787 | 0.8 | 0.01
179
+ Other | | 22.97 | | | 21.98
180
+
181
+ Particle moves = 11605278947 (11.6B)
182
+ Cells touched = 12203819218 (12.2B)
183
+ Particle comms = 80971537 (81M)
184
+ Boundary collides = 0 (0K)
185
+ Boundary exits = 8037356 (8.04M)
186
+ SurfColl checks = 32584677 (32.6M)
187
+ SurfColl occurs = 641027 (0.641M)
188
+ Surf reactions = 0 (0K)
189
+ Collide attempts = 139660950 (140M)
190
+ Collide occurs = 110879212 (111M)
191
+ Reactions = 0 (0K)
192
+ Particles stuck = 0
193
+ Axisymm bad moves = 0
194
+
195
+ Particle-moves/CPUsec/proc: 867657
196
+ Particle-moves/step: 58026.4
197
+ Cell-touches/particle/step: 1.05157
198
+ Particle comm iterations/step: 1
199
+ Particle fraction communicated: 0.00697713
200
+ Particle fraction colliding with boundary: 0
201
+ Particle fraction exiting boundary: 0.00069256
202
+ Surface-checks/particle/step: 0.00280775
203
+ Surface-collisions/particle/step: 5.52358e-05
204
+ Surf-reactions/particle/step: 0
205
+ Collision-attempts/particle/step: 0.0120343
206
+ Collisions/particle/step: 0.0095542
207
+ Reactions/particle/step: 0
208
+
209
+ Particles: 455.297 ave 2224 max 0 min
210
+ Histogram: 72 16 13 3 2 6 6 4 2 4
211
+ Cells: 62.875 ave 64 max 62 min
212
+ Histogram: 17 0 0 0 0 110 0 0 0 1
213
+ GhostCell: 1715.82 ave 3060 max 124 min
214
+ Histogram: 18 12 8 12 17 4 7 4 16 30
215
+ EmptyCell: 106.516 ave 174 max 30 min
216
+ Histogram: 5 5 16 9 14 19 28 19 11 2
217
+ Surfs: 200 ave 200 max 200 min
218
+ Histogram: 128 0 0 0 0 0 0 0 0 0
219
+ GhostSurf: 0 ave 0 max 0 min
220
+ Histogram: 128 0 0 0 0 0 0 0 0 0
221
+ compute 1 grid all air n nrho massrho u v w
222
+ compute 2 grid all air trot
223
+ compute 3 tvib/grid all air
224
+ compute 4 thermal/grid all air press temp
225
+ fix 1 ave/grid all 1 ${nave} ${nave} c_1[*] c_4[*] c_2[*] c_3[*] ave running
226
+ fix 1 ave/grid all 1 10000 ${nave} c_1[*] c_4[*] c_2[*] c_3[*] ave running
227
+ fix 1 ave/grid all 1 10000 10000 c_1[*] c_4[*] c_2[*] c_3[*] ave running
228
+ dump 1 grid all ${noutput} output/grid.*.dat id xc yc f_1[*]
229
+ dump 1 grid all 300000 output/grid.*.dat id xc yc f_1[*]
230
+ dump_modify 1 format float %12.5g
231
+ compute 5 surf all air n press px py shx shy fx fy etot erot evib
232
+ fix 2 ave/surf all 1 ${nave} ${nave} c_5[*] ave running
233
+ fix 2 ave/surf all 1 10000 ${nave} c_5[*] ave running
234
+ fix 2 ave/surf all 1 10000 10000 c_5[*] ave running
235
+ dump 2 surf all ${noutput} output/surf.*.dat id v1x v1y v2x v2y f_2[*]
236
+ dump 2 surf all 300000 output/surf.*.dat id v1x v1y v2x v2y f_2[*]
237
+ dump_modify 2 format float %12.5g
238
+ compute 6 lambda/grid f_1[2] f_1[8] Ar kx
239
+ dump 3 grid all ${noutput} output/lambdakn.*.dat id xc yc c_6[*]
240
+ dump 3 grid all 300000 output/lambdakn.*.dat id xc yc c_6[*]
241
+ dump_modify 3 format float %12.5g
242
+ run 100000
243
+ Memory usage per proc in Mbytes:
244
+ particles (ave,min,max) = 1.6084 0 1.6875
245
+ grid (ave,min,max) = 1.51379 1.51379 1.51379
246
+ surf (ave,min,max) = 0.0205994 0.0205994 0.0205994
247
+ total (ave,min,max) = 3.16416 1.55571 3.24371
248
+ Step CPU Np Natt Ncoll Nscoll Npave Nscollave
249
+ 200000 0 58278 636 524 0 0 0
250
+ 210000 5.6612965 58012 658 552 2 58067.277 3.1765
251
+ 220000 11.8293 58011 704 591 2 58074.904 3.1986
252
+ 230000 18.028546 58085 643 533 2 58117.432 3.1998
253
+ 240000 23.965293 57739 685 569 2 58110.013 3.193075
254
+ 250000 29.56659 58396 684 558 5 58112.526 3.20192
255
+ 260000 35.466003 57986 698 564 1 58114.954 3.2061667
256
+ 270000 41.549984 58063 659 555 7 58117.892 3.2060714
257
+ 280000 47.842518 58137 671 552 7 58113.212 3.20835
258
+ 290000 53.240462 58239 663 558 4 58121.659 3.2090444
259
+ 300000 58.879034 58480 678 561 3 58121.082 3.20667
260
+ Loop time of 58.8792 on 128 procs for 100000 steps with 58480 particles
261
+
262
+ MPI task timing breakdown:
263
+ Section | min time | avg time | max time |%varavg| %total
264
+ ---------------------------------------------------------------
265
+ Move | 0.011225 | 0.74634 | 3.2109 | 96.9 | 1.27
266
+ Coll | 0.028115 | 0.47455 | 1.9049 | 65.0 | 0.81
267
+ Sort | 0.012766 | 0.10066 | 0.42444 | 33.3 | 0.17
268
+ Comm | 21.88 | 39.458 | 44.688 | 70.1 | 67.02
269
+ Modify | 0.35099 | 2.0375 | 8.3601 | 149.5 | 3.46
270
+ Output | 0.021044 | 0.028413 | 0.032354 | 0.9 | 0.05
271
+ Other | | 16.03 | | | 27.23
272
+
273
+ Particle moves = 5812108204 (5.81B)
274
+ Cells touched = 6111632383 (6.11B)
275
+ Particle comms = 40520047 (40.5M)
276
+ Boundary collides = 0 (0K)
277
+ Boundary exits = 4021062 (4.02M)
278
+ SurfColl checks = 16327684 (16.3M)
279
+ SurfColl occurs = 320667 (0.321M)
280
+ Surf reactions = 0 (0K)
281
+ Collide attempts = 70071980 (70.1M)
282
+ Collide occurs = 55634597 (55.6M)
283
+ Reactions = 0 (0K)
284
+ Particles stuck = 0
285
+ Axisymm bad moves = 0
286
+
287
+ Particle-moves/CPUsec/proc: 771190
288
+ Particle-moves/step: 58121.1
289
+ Cell-touches/particle/step: 1.05153
290
+ Particle comm iterations/step: 1
291
+ Particle fraction communicated: 0.00697166
292
+ Particle fraction colliding with boundary: 0
293
+ Particle fraction exiting boundary: 0.000691842
294
+ Surface-checks/particle/step: 0.00280925
295
+ Surface-collisions/particle/step: 5.51722e-05
296
+ Surf-reactions/particle/step: 0
297
+ Collision-attempts/particle/step: 0.0120562
298
+ Collisions/particle/step: 0.00957219
299
+ Reactions/particle/step: 0
300
+
301
+ Particles: 456.875 ave 2291 max 0 min
302
+ Histogram: 72 16 14 2 4 5 5 4 2 4
303
+ Cells: 62.875 ave 64 max 62 min
304
+ Histogram: 17 0 0 0 0 110 0 0 0 1
305
+ GhostCell: 1715.82 ave 3060 max 124 min
306
+ Histogram: 18 12 8 12 17 4 7 4 16 30
307
+ EmptyCell: 106.516 ave 174 max 30 min
308
+ Histogram: 5 5 16 9 14 19 28 19 11 2
309
+ Surfs: 200 ave 200 max 200 min
310
+ Histogram: 128 0 0 0 0 0 0 0 0 0
311
+ GhostSurf: 0 ave 0 max 0 min
312
+ Histogram: 128 0 0 0 0 0 0 0 0 0
313
+ write_grid grid/final-grid.dat
314
+ grid cells = 8048
315
+ CPU time = 0.00187099 secs
316
+ write_surf surf/geom.surf
317
+ surf elements = 200
318
+ CPU time = 0.00162774 secs