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Upload CylinderKnMa\Kn1p00\simulation2355_Kn1p00Ma2p4\log.sparta with huggingface_hub

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  1. CylinderKnMa//Kn1p00//simulation2355_Kn1p00Ma2p4//log.sparta +318 -0
CylinderKnMa//Kn1p00//simulation2355_Kn1p00Ma2p4//log.sparta ADDED
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1
+ SPARTA (4 Sep 2024)
2
+ Running on 128 MPI task(s)
3
+ variable BZ equal 1.380649E-23
4
+ variable PI equal 3.1415926536
5
+ variable molecular_mass equal 6.63E-26
6
+ variable molecular_diameter equal 4.17E-10
7
+ variable gamma equal 1.666666667
8
+ variable R equal ${BZ}/${molecular_mass}
9
+ variable R equal 1.380649e-23/${molecular_mass}
10
+ variable R equal 1.380649e-23/6.63e-26
11
+ variable L equal 1.0
12
+ variable xmin equal -5.0
13
+ variable xmax equal 6.0
14
+ variable ymin equal -5.0
15
+ variable ymax equal 5.0
16
+ variable Kn equal 1.0
17
+ variable Ma equal 2.4
18
+ variable To equal 273.0
19
+ variable Tb equal 273.0
20
+ variable theta equal 0.0
21
+ variable mfp equal ${Kn}*${L}
22
+ variable mfp equal 1*${L}
23
+ variable mfp equal 1*1
24
+ variable cpmfp equal 4
25
+ variable nden equal 1.0/sqrt(2.0)/${PI}/${molecular_diameter}/${molecular_diameter}/(${mfp}/${cpmfp}*${Kn})
26
+ variable nden equal 1.0/sqrt(2.0)/3.1415926536/${molecular_diameter}/${molecular_diameter}/(${mfp}/${cpmfp}*${Kn})
27
+ variable nden equal 1.0/sqrt(2.0)/3.1415926536/4.17e-10/${molecular_diameter}/(${mfp}/${cpmfp}*${Kn})
28
+ variable nden equal 1.0/sqrt(2.0)/3.1415926536/4.17e-10/4.17e-10/(${mfp}/${cpmfp}*${Kn})
29
+ variable nden equal 1.0/sqrt(2.0)/3.1415926536/4.17e-10/4.17e-10/(1/${cpmfp}*${Kn})
30
+ variable nden equal 1.0/sqrt(2.0)/3.1415926536/4.17e-10/4.17e-10/(1/4*${Kn})
31
+ variable nden equal 1.0/sqrt(2.0)/3.1415926536/4.17e-10/4.17e-10/(1/4*1)
32
+ variable sos equal sqrt(${gamma}*${R}*${To})
33
+ variable sos equal sqrt(1.666666667*${R}*${To})
34
+ variable sos equal sqrt(1.666666667*208.242684766214*${To})
35
+ variable sos equal sqrt(1.666666667*208.242684766214*273)
36
+ variable vo equal ${Ma}*${sos}
37
+ variable vo equal 2.4*${sos}
38
+ variable vo equal 2.4*307.815564238681
39
+ variable vx equal ${vo}*cos(${theta}*2*PI/360)
40
+ variable vx equal 738.757354172834*cos(${theta}*2*PI/360)
41
+ variable vx equal 738.757354172834*cos(0*2*PI/360)
42
+ variable vy equal ${vo}*sin(${theta}*2*PI/360)
43
+ variable vy equal 738.757354172834*sin(${theta}*2*PI/360)
44
+ variable vy equal 738.757354172834*sin(0*2*PI/360)
45
+ variable ppc equal 30
46
+ variable xncells equal (${xmax}-${xmin})/${mfp}*${cpmfp}
47
+ variable xncells equal (6-${xmin})/${mfp}*${cpmfp}
48
+ variable xncells equal (6--5)/${mfp}*${cpmfp}
49
+ variable xncells equal (6--5)/1*${cpmfp}
50
+ variable xncells equal (6--5)/1*4
51
+ variable yncells equal (${ymax}-${ymin})/${mfp}*${cpmfp}
52
+ variable yncells equal (5-${ymin})/${mfp}*${cpmfp}
53
+ variable yncells equal (5--5)/${mfp}*${cpmfp}
54
+ variable yncells equal (5--5)/1*${cpmfp}
55
+ variable yncells equal (5--5)/1*4
56
+ variable Fnum equal ${nden}*(${xmax}-${xmin})*(${ymax}-${ymin})/${ppc}/${xncells}/${yncells}
57
+ variable Fnum equal 5.17753461204666e+18*(${xmax}-${xmin})*(${ymax}-${ymin})/${ppc}/${xncells}/${yncells}
58
+ variable Fnum equal 5.17753461204666e+18*(6-${xmin})*(${ymax}-${ymin})/${ppc}/${xncells}/${yncells}
59
+ variable Fnum equal 5.17753461204666e+18*(6--5)*(${ymax}-${ymin})/${ppc}/${xncells}/${yncells}
60
+ variable Fnum equal 5.17753461204666e+18*(6--5)*(5-${ymin})/${ppc}/${xncells}/${yncells}
61
+ variable Fnum equal 5.17753461204666e+18*(6--5)*(5--5)/${ppc}/${xncells}/${yncells}
62
+ variable Fnum equal 5.17753461204666e+18*(6--5)*(5--5)/30/${xncells}/${yncells}
63
+ variable Fnum equal 5.17753461204666e+18*(6--5)*(5--5)/30/44/${yncells}
64
+ variable Fnum equal 5.17753461204666e+18*(6--5)*(5--5)/30/44/40
65
+ variable tstep equal (-${xmin}+${xmax})/${vx}/${xncells}/10/4
66
+ variable tstep equal (--5+${xmax})/${vx}/${xncells}/10/4
67
+ variable tstep equal (--5+6)/${vx}/${xncells}/10/4
68
+ variable tstep equal (--5+6)/738.757354172834/${xncells}/10/4
69
+ variable tstep equal (--5+6)/738.757354172834/44/10/4
70
+ variable nave equal 10000
71
+ variable noutput equal 300000
72
+ clear
73
+ Running on 128 MPI task(s)
74
+ shell mkdir output
75
+ shell mkdir grid
76
+ shell mkdir surf
77
+ seed 7
78
+ dimension 2
79
+ global nrho ${nden}
80
+ global nrho 5.17753461204666e+18
81
+ global fnum ${Fnum}
82
+ global fnum 1.07865304417639e+16
83
+ timestep ${tstep}
84
+ timestep 8.46015266676831e-06
85
+ global gridcut 1.0 particle/reorder 100 comm/sort yes
86
+ region 1 cylinder z 0.0 0.0 3.50 -0.5 0.5
87
+ region 2 cylinder z 0.0 0.0 2.00 -0.5 0.5
88
+ region 3 cylinder z 0.0 0.0 0.80 -0.5 0.5
89
+ boundary o o p
90
+ create_box ${xmin} ${xmax} ${ymin} ${ymax} -0.5 0.5
91
+ create_box -5 ${xmax} ${ymin} ${ymax} -0.5 0.5
92
+ create_box -5 6 ${ymin} ${ymax} -0.5 0.5
93
+ create_box -5 6 -5 ${ymax} -0.5 0.5
94
+ create_box -5 6 -5 5 -0.5 0.5
95
+ Created orthogonal box = (-5 -5 -0.5) to (6 5 0.5)
96
+ create_grid ${xncells} ${yncells} 1 levels 4 region 2 1 2 2 1 region 3 2 2 2 1 region 4 3 2 2 1 clump xyz
97
+ create_grid 44 ${yncells} 1 levels 4 region 2 1 2 2 1 region 3 2 2 2 1 region 4 3 2 2 1 clump xyz
98
+ create_grid 44 40 1 levels 4 region 2 1 2 2 1 region 3 2 2 2 1 region 4 3 2 2 1 clump xyz
99
+ Created 8048 child grid cells
100
+ CPU time = 0.0705812 secs
101
+ create/ghost percent = 1.46636 98.5336
102
+ balance_grid rcb cell
103
+ Balance grid migrated 8026 cells
104
+ CPU time = 0.0717065 secs
105
+ reassign/sort/migrate/ghost percent = 84.7625 0.0419627 9.09566 6.09985
106
+ species gas.species Ar
107
+ mixture air Ar frac 1.0
108
+ mixture air Ar vstream ${vx} ${vy} 0.0 temp ${To}
109
+ mixture air Ar vstream 738.757354172834 ${vy} 0.0 temp ${To}
110
+ mixture air Ar vstream 738.757354172834 0 0.0 temp ${To}
111
+ mixture air Ar vstream 738.757354172834 0 0.0 temp 273
112
+ collide vss air gas.vhs
113
+ collide_modify vremax 100 yes remain no nearcp yes 10
114
+ read_surf cylinder.surf
115
+ 200 lines
116
+ -0.5 0.5 xlo xhi
117
+ -0.5 0.5 ylo yhi
118
+ 0 0 zlo zhi
119
+ 0.0157073 min line length
120
+ 132 0 = cells overlapping surfs, overlap cells with unmarked corner pts
121
+ 7184 732 132 = cells outside/inside/overlapping surfs
122
+ 132 = surf cells with 1,2,etc splits
123
+ 109.215 109.215 = cell-wise and global flow volume
124
+ CPU time = 0.0955368 secs
125
+ read/check/sort/surf2grid/ghost/inout/particle percent = 31.1054 37.3222 2.94065 23.4278 5.20399 6.1896 0.0207459
126
+ surf2grid time = 0.0223822 secs
127
+ map/comm1/comm2/comm3/comm4/split percent = 12.9167 25.8078 2.65885 2.02643 12.6718 7.18274
128
+ surf_collide 1 diffuse 273.0 1.0
129
+ surf_modify all collide 1
130
+ fix in emit/face air xlo ylo yhi
131
+ balance_grid rcb cell
132
+ Balance grid migrated 506 cells
133
+ CPU time = 0.0149571 secs
134
+ reassign/sort/migrate/ghost percent = 14.7299 0.227116 62.8803 22.1627
135
+ create_particles air n 0
136
+ Created 52423 particles
137
+ CPU time = 0.00937841 secs
138
+ stats 10000
139
+ stats_style step cpu np nattempt ncoll nscoll npave nscollave
140
+ run 200000
141
+ Memory usage per proc in Mbytes:
142
+ particles (ave,min,max) = 1.59521 0 1.6875
143
+ grid (ave,min,max) = 1.51379 1.51379 1.51379
144
+ surf (ave,min,max) = 0.0205994 0.0205994 0.0205994
145
+ total (ave,min,max) = 3.12961 1.53439 3.22189
146
+ Step CPU Np Natt Ncoll Nscoll Npave Nscollave
147
+ 0 0 52423 0 0 0 0 0
148
+ 10000 4.9505991 58721 567 460 5 57248.577 3.3802
149
+ 20000 9.9839914 58420 519 435 5 57940.673 3.38845
150
+ 30000 15.309023 58556 542 453 5 58144.367 3.3988
151
+ 40000 20.137208 58571 579 492 4 58212.956 3.392
152
+ 50000 25.161714 58010 583 487 2 58270.137 3.39746
153
+ 60000 30.125851 58623 604 505 1 58311.922 3.4005833
154
+ 70000 35.62137 58742 564 473 5 58348.399 3.4017429
155
+ 80000 40.72707 58600 595 510 5 58392.65 3.402475
156
+ 90000 46.446041 58592 584 488 4 58411.406 3.4028111
157
+ 100000 51.35092 58330 591 509 3 58424.344 3.40271
158
+ 110000 57.071957 58587 569 477 7 58432.007 3.4041364
159
+ 120000 62.000137 58869 563 479 5 58445.801 3.4040083
160
+ 130000 66.652517 58598 590 506 5 58470.977 3.4064385
161
+ 140000 72.214084 58463 577 472 4 58473.765 3.4051214
162
+ 150000 76.859991 58766 554 471 5 58482.091 3.4046933
163
+ 160000 81.913349 58369 557 469 3 58487.198 3.4048875
164
+ 170000 86.987864 58602 578 487 1 58490.83 3.4049294
165
+ 180000 91.929223 58449 548 463 2 58506.083 3.4036889
166
+ 190000 97.229154 58190 580 490 4 58507.173 3.4040632
167
+ 200000 102.56767 58472 567 477 2 58511.359 3.40394
168
+ Loop time of 102.568 on 128 procs for 200000 steps with 58472 particles
169
+
170
+ MPI task timing breakdown:
171
+ Section | min time | avg time | max time |%varavg| %total
172
+ ---------------------------------------------------------------
173
+ Move | 0.023509 | 1.4693 | 6.8399 | 138.5 | 1.43
174
+ Coll | 0.057051 | 0.89402 | 3.9793 | 89.3 | 0.87
175
+ Sort | 0.025708 | 0.19788 | 0.93614 | 48.3 | 0.19
176
+ Comm | 43.649 | 78.105 | 88.325 | 98.2 | 76.15
177
+ Modify | 0.017264 | 0.055716 | 0.8747 | 52.6 | 0.05
178
+ Output | 0.0040291 | 0.0045757 | 0.0070946 | 0.9 | 0.00
179
+ Other | | 21.84 | | | 21.29
180
+
181
+ Particle moves = 11702271711 (11.7B)
182
+ Cells touched = 12281706523 (12.3B)
183
+ Particle comms = 78693836 (78.7M)
184
+ Boundary collides = 0 (0K)
185
+ Boundary exits = 7691935 (7.69M)
186
+ SurfColl checks = 39021821 (39M)
187
+ SurfColl occurs = 680788 (0.681M)
188
+ Surf reactions = 0 (0K)
189
+ Collide attempts = 119887129 (120M)
190
+ Collide occurs = 95839037 (95.8M)
191
+ Reactions = 0 (0K)
192
+ Particles stuck = 0
193
+ Axisymm bad moves = 0
194
+
195
+ Particle-moves/CPUsec/proc: 891350
196
+ Particle-moves/step: 58511.4
197
+ Cell-touches/particle/step: 1.04951
198
+ Particle comm iterations/step: 1
199
+ Particle fraction communicated: 0.00672466
200
+ Particle fraction colliding with boundary: 0
201
+ Particle fraction exiting boundary: 0.000657303
202
+ Surface-checks/particle/step: 0.00333455
203
+ Surface-collisions/particle/step: 5.81757e-05
204
+ Surf-reactions/particle/step: 0
205
+ Collision-attempts/particle/step: 0.0102448
206
+ Collisions/particle/step: 0.00818978
207
+ Reactions/particle/step: 0
208
+
209
+ Particles: 456.812 ave 2360 max 0 min
210
+ Histogram: 75 15 11 4 4 5 4 5 1 4
211
+ Cells: 62.875 ave 64 max 62 min
212
+ Histogram: 17 0 0 0 0 110 0 0 0 1
213
+ GhostCell: 1715.82 ave 3060 max 124 min
214
+ Histogram: 18 12 8 12 17 4 7 4 16 30
215
+ EmptyCell: 106.516 ave 174 max 30 min
216
+ Histogram: 5 5 16 9 14 19 28 19 11 2
217
+ Surfs: 200 ave 200 max 200 min
218
+ Histogram: 128 0 0 0 0 0 0 0 0 0
219
+ GhostSurf: 0 ave 0 max 0 min
220
+ Histogram: 128 0 0 0 0 0 0 0 0 0
221
+ compute 1 grid all air n nrho massrho u v w
222
+ compute 2 grid all air trot
223
+ compute 3 tvib/grid all air
224
+ compute 4 thermal/grid all air press temp
225
+ fix 1 ave/grid all 1 ${nave} ${nave} c_1[*] c_4[*] c_2[*] c_3[*] ave running
226
+ fix 1 ave/grid all 1 10000 ${nave} c_1[*] c_4[*] c_2[*] c_3[*] ave running
227
+ fix 1 ave/grid all 1 10000 10000 c_1[*] c_4[*] c_2[*] c_3[*] ave running
228
+ dump 1 grid all ${noutput} output/grid.*.dat id xc yc f_1[*]
229
+ dump 1 grid all 300000 output/grid.*.dat id xc yc f_1[*]
230
+ dump_modify 1 format float %12.5g
231
+ compute 5 surf all air n press px py shx shy fx fy etot erot evib
232
+ fix 2 ave/surf all 1 ${nave} ${nave} c_5[*] ave running
233
+ fix 2 ave/surf all 1 10000 ${nave} c_5[*] ave running
234
+ fix 2 ave/surf all 1 10000 10000 c_5[*] ave running
235
+ dump 2 surf all ${noutput} output/surf.*.dat id v1x v1y v2x v2y f_2[*]
236
+ dump 2 surf all 300000 output/surf.*.dat id v1x v1y v2x v2y f_2[*]
237
+ dump_modify 2 format float %12.5g
238
+ compute 6 lambda/grid f_1[2] f_1[8] Ar kx
239
+ dump 3 grid all ${noutput} output/lambdakn.*.dat id xc yc c_6[*]
240
+ dump 3 grid all 300000 output/lambdakn.*.dat id xc yc c_6[*]
241
+ dump_modify 3 format float %12.5g
242
+ run 100000
243
+ Memory usage per proc in Mbytes:
244
+ particles (ave,min,max) = 1.6084 0 1.6875
245
+ grid (ave,min,max) = 1.51379 1.51379 1.51379
246
+ surf (ave,min,max) = 0.0205994 0.0205994 0.0205994
247
+ total (ave,min,max) = 3.16416 1.55571 3.24371
248
+ Step CPU Np Natt Ncoll Nscoll Npave Nscollave
249
+ 200000 0 58472 567 477 0 0 0
250
+ 210000 6.1732471 58542 586 499 2 58640.543 3.4244
251
+ 220000 11.87793 58550 576 477 3 58617.541 3.4167
252
+ 230000 18.251519 58741 581 493 3 58600.297 3.4159667
253
+ 240000 23.74248 58611 554 459 7 58589.486 3.40545
254
+ 250000 29.987222 58589 544 454 2 58601.603 3.41324
255
+ 260000 35.287467 58737 591 504 2 58600.778 3.4172667
256
+ 270000 40.997353 58743 574 486 2 58612.194 3.4190286
257
+ 280000 46.705407 58550 548 456 4 58602.122 3.4184
258
+ 290000 52.925312 58918 546 448 1 58599.116 3.4193889
259
+ 300000 58.856858 58316 557 479 2 58594.677 3.41657
260
+ Loop time of 58.857 on 128 procs for 100000 steps with 58316 particles
261
+
262
+ MPI task timing breakdown:
263
+ Section | min time | avg time | max time |%varavg| %total
264
+ ---------------------------------------------------------------
265
+ Move | 0.011603 | 0.73489 | 3.4104 | 97.7 | 1.25
266
+ Coll | 0.027484 | 0.44987 | 2.0087 | 63.5 | 0.76
267
+ Sort | 0.013034 | 0.10039 | 0.47032 | 34.2 | 0.17
268
+ Comm | 22.627 | 39.888 | 45.31 | 69.5 | 67.77
269
+ Modify | 0.3455 | 2.0142 | 8.8649 | 151.2 | 3.42
270
+ Output | 0.018634 | 0.020066 | 0.023635 | 0.8 | 0.03
271
+ Other | | 15.65 | | | 26.59
272
+
273
+ Particle moves = 5859467732 (5.86B)
274
+ Cells touched = 6149562024 (6.15B)
275
+ Particle comms = 39395872 (39.4M)
276
+ Boundary collides = 0 (0K)
277
+ Boundary exits = 3849615 (3.85M)
278
+ SurfColl checks = 19564709 (19.6M)
279
+ SurfColl occurs = 341657 (0.342M)
280
+ Surf reactions = 0 (0K)
281
+ Collide attempts = 60135101 (60.1M)
282
+ Collide occurs = 48077067 (48.1M)
283
+ Reactions = 0 (0K)
284
+ Particles stuck = 0
285
+ Axisymm bad moves = 0
286
+
287
+ Particle-moves/CPUsec/proc: 777767
288
+ Particle-moves/step: 58594.7
289
+ Cell-touches/particle/step: 1.04951
290
+ Particle comm iterations/step: 1
291
+ Particle fraction communicated: 0.00672346
292
+ Particle fraction colliding with boundary: 0
293
+ Particle fraction exiting boundary: 0.000656991
294
+ Surface-checks/particle/step: 0.00333899
295
+ Surface-collisions/particle/step: 5.83085e-05
296
+ Surf-reactions/particle/step: 0
297
+ Collision-attempts/particle/step: 0.0102629
298
+ Collisions/particle/step: 0.00820502
299
+ Reactions/particle/step: 0
300
+
301
+ Particles: 455.594 ave 2381 max 0 min
302
+ Histogram: 75 15 10 5 3 8 4 4 0 4
303
+ Cells: 62.875 ave 64 max 62 min
304
+ Histogram: 17 0 0 0 0 110 0 0 0 1
305
+ GhostCell: 1715.82 ave 3060 max 124 min
306
+ Histogram: 18 12 8 12 17 4 7 4 16 30
307
+ EmptyCell: 106.516 ave 174 max 30 min
308
+ Histogram: 5 5 16 9 14 19 28 19 11 2
309
+ Surfs: 200 ave 200 max 200 min
310
+ Histogram: 128 0 0 0 0 0 0 0 0 0
311
+ GhostSurf: 0 ave 0 max 0 min
312
+ Histogram: 128 0 0 0 0 0 0 0 0 0
313
+ write_grid grid/final-grid.dat
314
+ grid cells = 8048
315
+ CPU time = 0.00183321 secs
316
+ write_surf surf/geom.surf
317
+ surf elements = 200
318
+ CPU time = 0.00162445 secs