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CylinderKnMa//Kn1p00//simulation2354_Kn1p00Ma2p3//log.sparta DELETED
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- SPARTA (4 Sep 2024)
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- Running on 128 MPI task(s)
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- variable BZ equal 1.380649E-23
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- variable PI equal 3.1415926536
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- variable molecular_mass equal 6.63E-26
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- variable molecular_diameter equal 4.17E-10
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- variable gamma equal 1.666666667
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- variable R equal ${BZ}/${molecular_mass}
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- variable R equal 1.380649e-23/${molecular_mass}
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- variable R equal 1.380649e-23/6.63e-26
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- variable L equal 1.0
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- variable xmin equal -5.0
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- variable xmax equal 6.0
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- variable ymin equal -5.0
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- variable ymax equal 5.0
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- variable Kn equal 1.0
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- variable Ma equal 2.3
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- variable To equal 273.0
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- variable Tb equal 273.0
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- variable theta equal 0.0
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- variable mfp equal ${Kn}*${L}
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- variable mfp equal 1*${L}
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- variable mfp equal 1*1
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- variable cpmfp equal 4
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- variable nden equal 1.0/sqrt(2.0)/${PI}/${molecular_diameter}/${molecular_diameter}/(${mfp}/${cpmfp}*${Kn})
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- variable nden equal 1.0/sqrt(2.0)/3.1415926536/${molecular_diameter}/${molecular_diameter}/(${mfp}/${cpmfp}*${Kn})
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- variable nden equal 1.0/sqrt(2.0)/3.1415926536/4.17e-10/${molecular_diameter}/(${mfp}/${cpmfp}*${Kn})
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- variable nden equal 1.0/sqrt(2.0)/3.1415926536/4.17e-10/4.17e-10/(${mfp}/${cpmfp}*${Kn})
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- variable nden equal 1.0/sqrt(2.0)/3.1415926536/4.17e-10/4.17e-10/(1/${cpmfp}*${Kn})
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- variable nden equal 1.0/sqrt(2.0)/3.1415926536/4.17e-10/4.17e-10/(1/4*${Kn})
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- variable nden equal 1.0/sqrt(2.0)/3.1415926536/4.17e-10/4.17e-10/(1/4*1)
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- variable sos equal sqrt(${gamma}*${R}*${To})
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- variable sos equal sqrt(1.666666667*${R}*${To})
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- variable sos equal sqrt(1.666666667*208.242684766214*${To})
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- variable sos equal sqrt(1.666666667*208.242684766214*273)
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- variable vo equal ${Ma}*${sos}
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- variable vo equal 2.3*${sos}
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- variable vo equal 2.3*307.815564238681
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- variable vx equal ${vo}*cos(${theta}*2*PI/360)
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- variable vx equal 707.975797748966*cos(${theta}*2*PI/360)
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- variable vx equal 707.975797748966*cos(0*2*PI/360)
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- variable vy equal ${vo}*sin(${theta}*2*PI/360)
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- variable vy equal 707.975797748966*sin(${theta}*2*PI/360)
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- variable vy equal 707.975797748966*sin(0*2*PI/360)
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- variable ppc equal 30
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- variable xncells equal (${xmax}-${xmin})/${mfp}*${cpmfp}
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- variable xncells equal (6-${xmin})/${mfp}*${cpmfp}
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- variable xncells equal (6--5)/${mfp}*${cpmfp}
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- variable xncells equal (6--5)/1*${cpmfp}
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- variable xncells equal (6--5)/1*4
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- variable yncells equal (${ymax}-${ymin})/${mfp}*${cpmfp}
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- variable yncells equal (5-${ymin})/${mfp}*${cpmfp}
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- variable yncells equal (5--5)/${mfp}*${cpmfp}
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- variable yncells equal (5--5)/1*${cpmfp}
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- variable yncells equal (5--5)/1*4
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- variable Fnum equal ${nden}*(${xmax}-${xmin})*(${ymax}-${ymin})/${ppc}/${xncells}/${yncells}
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- variable Fnum equal 5.17753461204666e+18*(${xmax}-${xmin})*(${ymax}-${ymin})/${ppc}/${xncells}/${yncells}
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- variable Fnum equal 5.17753461204666e+18*(6-${xmin})*(${ymax}-${ymin})/${ppc}/${xncells}/${yncells}
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- variable Fnum equal 5.17753461204666e+18*(6--5)*(${ymax}-${ymin})/${ppc}/${xncells}/${yncells}
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- variable Fnum equal 5.17753461204666e+18*(6--5)*(5-${ymin})/${ppc}/${xncells}/${yncells}
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- variable Fnum equal 5.17753461204666e+18*(6--5)*(5--5)/${ppc}/${xncells}/${yncells}
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- variable Fnum equal 5.17753461204666e+18*(6--5)*(5--5)/30/${xncells}/${yncells}
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- variable Fnum equal 5.17753461204666e+18*(6--5)*(5--5)/30/44/${yncells}
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- variable Fnum equal 5.17753461204666e+18*(6--5)*(5--5)/30/44/40
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- variable tstep equal (-${xmin}+${xmax})/${vx}/${xncells}/10/4
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- variable tstep equal (--5+${xmax})/${vx}/${xncells}/10/4
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- variable tstep equal (--5+6)/${vx}/${xncells}/10/4
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- variable tstep equal (--5+6)/707.975797748966/${xncells}/10/4
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- variable tstep equal (--5+6)/707.975797748966/44/10/4
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- variable nave equal 10000
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- variable noutput equal 300000
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- clear
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- Running on 128 MPI task(s)
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- shell mkdir output
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- shell mkdir grid
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- shell mkdir surf
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- seed 7
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- dimension 2
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- global nrho ${nden}
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- global nrho 5.17753461204666e+18
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- global fnum ${Fnum}
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- global fnum 1.07865304417639e+16
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- timestep ${tstep}
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- timestep 8.82798539141041e-06
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- global gridcut 1.0 particle/reorder 100 comm/sort yes
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- region 1 cylinder z 0.0 0.0 3.50 -0.5 0.5
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- region 2 cylinder z 0.0 0.0 2.00 -0.5 0.5
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- region 3 cylinder z 0.0 0.0 0.80 -0.5 0.5
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- boundary o o p
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- create_box ${xmin} ${xmax} ${ymin} ${ymax} -0.5 0.5
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- create_box -5 ${xmax} ${ymin} ${ymax} -0.5 0.5
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- create_box -5 6 ${ymin} ${ymax} -0.5 0.5
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- create_box -5 6 -5 ${ymax} -0.5 0.5
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- create_box -5 6 -5 5 -0.5 0.5
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- Created orthogonal box = (-5 -5 -0.5) to (6 5 0.5)
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- create_grid ${xncells} ${yncells} 1 levels 4 region 2 1 2 2 1 region 3 2 2 2 1 region 4 3 2 2 1 clump xyz
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- create_grid 44 ${yncells} 1 levels 4 region 2 1 2 2 1 region 3 2 2 2 1 region 4 3 2 2 1 clump xyz
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- create_grid 44 40 1 levels 4 region 2 1 2 2 1 region 3 2 2 2 1 region 4 3 2 2 1 clump xyz
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- Created 8048 child grid cells
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- CPU time = 0.0561292 secs
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- create/ghost percent = 1.85942 98.1406
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- balance_grid rcb cell
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- Balance grid migrated 8026 cells
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- CPU time = 0.0690245 secs
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- reassign/sort/migrate/ghost percent = 83.7735 0.0404205 9.60634 6.57969
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- species gas.species Ar
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- mixture air Ar frac 1.0
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- mixture air Ar vstream ${vx} ${vy} 0.0 temp ${To}
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- mixture air Ar vstream 707.975797748966 ${vy} 0.0 temp ${To}
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- mixture air Ar vstream 707.975797748966 0 0.0 temp ${To}
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- mixture air Ar vstream 707.975797748966 0 0.0 temp 273
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- collide vss air gas.vhs
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- collide_modify vremax 100 yes remain no nearcp yes 10
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- read_surf cylinder.surf
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- 200 lines
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- -0.5 0.5 xlo xhi
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- -0.5 0.5 ylo yhi
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- 0 0 zlo zhi
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- 0.0157073 min line length
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- 132 0 = cells overlapping surfs, overlap cells with unmarked corner pts
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- 7184 732 132 = cells outside/inside/overlapping surfs
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- 132 = surf cells with 1,2,etc splits
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- 109.215 109.215 = cell-wise and global flow volume
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- CPU time = 0.0930133 secs
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- read/check/sort/surf2grid/ghost/inout/particle percent = 32.9919 34.8329 2.87065 23.9533 5.3513 5.99182 0.0847728
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- surf2grid time = 0.0222797 secs
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- map/comm1/comm2/comm3/comm4/split percent = 17.5841 24.2527 2.30559 1.80276 12.0402 6.82333
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- surf_collide 1 diffuse 273.0 1.0
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- surf_modify all collide 1
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- fix in emit/face air xlo ylo yhi
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- balance_grid rcb cell
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- Balance grid migrated 506 cells
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- CPU time = 0.0149138 secs
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- reassign/sort/migrate/ghost percent = 15.4812 0.189019 60.8326 23.4971
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- create_particles air n 0
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- Created 52423 particles
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- CPU time = 0.00888719 secs
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- stats 10000
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- stats_style step cpu np nattempt ncoll nscoll npave nscollave
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- run 200000
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- Memory usage per proc in Mbytes:
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- particles (ave,min,max) = 1.59521 0 1.6875
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- grid (ave,min,max) = 1.51379 1.51379 1.51379
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- surf (ave,min,max) = 0.0205994 0.0205994 0.0205994
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- total (ave,min,max) = 3.12961 1.53439 3.22189
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- Step CPU Np Natt Ncoll Nscoll Npave Nscollave
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- 0 0 52423 0 0 0 0 0
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- 10000 4.9707935 58330 611 511 10 57110.68 3.319
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- 20000 9.6917026 58492 574 475 4 57816.92 3.34795
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- 30000 15.790362 58313 636 548 5 58021.34 3.3443
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- 40000 20.613061 58558 606 513 2 58119.28 3.353025
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- 50000 26.198191 58078 575 478 2 58178.497 3.35352
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- 60000 31.102086 58518 626 524 2 58216.588 3.3546333
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- 70000 35.840529 58442 585 494 5 58247.46 3.3496143
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- 80000 40.772605 58574 563 482 3 58285.111 3.3494625
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- 90000 45.992382 58406 575 471 2 58301.375 3.3496556
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- 100000 50.696662 58574 586 501 4 58304.567 3.34988
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- 110000 55.76647 58865 595 479 3 58321.699 3.3518545
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- 120000 60.702022 58602 607 520 2 58349.904 3.3522667
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- 130000 65.449493 58385 566 490 9 58368.216 3.3557
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- 140000 70.136002 58727 552 455 3 58381.541 3.3541786
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- 150000 75.962801 58136 585 479 2 58392.222 3.3558
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- 160000 81.291418 58375 616 514 4 58392.838 3.357575
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- 170000 87.029287 58404 595 499 4 58403.7 3.3575353
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- 180000 91.803733 58643 637 515 1 58408.323 3.35735
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- 190000 96.440213 58289 564 480 3 58414.292 3.3572105
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- 200000 101.80679 58403 554 449 2 58422.803 3.35606
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- Loop time of 101.807 on 128 procs for 200000 steps with 58403 particles
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-
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- MPI task timing breakdown:
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- Section | min time | avg time | max time |%varavg| %total
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- ---------------------------------------------------------------
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- Move | 0.022433 | 1.4764 | 6.7971 | 138.9 | 1.45
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- Coll | 0.055362 | 0.89723 | 3.9204 | 90.0 | 0.88
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- Sort | 0.025724 | 0.1984 | 0.91211 | 48.1 | 0.19
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- Comm | 43.427 | 77.849 | 88.274 | 97.8 | 76.47
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- Modify | 0.016731 | 0.054565 | 0.85189 | 51.6 | 0.05
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- Output | 0.0056724 | 0.0065569 | 0.0094211 | 0.8 | 0.01
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- Other | | 21.33 | | | 20.95
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-
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- Particle moves = 11684560677 (11.7B)
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- Cells touched = 12268214303 (12.3B)
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- Particle comms = 79195930 (79.2M)
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- Boundary collides = 0 (0K)
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- Boundary exits = 7767593 (7.77M)
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- SurfColl checks = 37363352 (37.4M)
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- SurfColl occurs = 671212 (0.671M)
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- Surf reactions = 0 (0K)
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- Collide attempts = 124299699 (124M)
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- Collide occurs = 99196072 (99.2M)
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- Reactions = 0 (0K)
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- Particles stuck = 0
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- Axisymm bad moves = 0
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-
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- Particle-moves/CPUsec/proc: 896652
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- Particle-moves/step: 58422.8
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- Cell-touches/particle/step: 1.04995
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- Particle comm iterations/step: 1
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- Particle fraction communicated: 0.00677783
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- Particle fraction colliding with boundary: 0
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- Particle fraction exiting boundary: 0.000664774
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- Surface-checks/particle/step: 0.00319767
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- Surface-collisions/particle/step: 5.74444e-05
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- Surf-reactions/particle/step: 0
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- Collision-attempts/particle/step: 0.0106379
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- Collisions/particle/step: 0.0084895
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- Reactions/particle/step: 0
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-
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- Particles: 456.273 ave 2345 max 0 min
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- Histogram: 75 13 14 2 4 6 4 5 1 4
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- Cells: 62.875 ave 64 max 62 min
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- Histogram: 17 0 0 0 0 110 0 0 0 1
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- GhostCell: 1715.82 ave 3060 max 124 min
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- Histogram: 18 12 8 12 17 4 7 4 16 30
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- EmptyCell: 106.516 ave 174 max 30 min
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- Histogram: 5 5 16 9 14 19 28 19 11 2
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- Surfs: 200 ave 200 max 200 min
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- Histogram: 128 0 0 0 0 0 0 0 0 0
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- GhostSurf: 0 ave 0 max 0 min
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- Histogram: 128 0 0 0 0 0 0 0 0 0
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- compute 1 grid all air n nrho massrho u v w
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- compute 2 grid all air trot
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- compute 3 tvib/grid all air
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- compute 4 thermal/grid all air press temp
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- fix 1 ave/grid all 1 ${nave} ${nave} c_1[*] c_4[*] c_2[*] c_3[*] ave running
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- fix 1 ave/grid all 1 10000 ${nave} c_1[*] c_4[*] c_2[*] c_3[*] ave running
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- fix 1 ave/grid all 1 10000 10000 c_1[*] c_4[*] c_2[*] c_3[*] ave running
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- dump 1 grid all ${noutput} output/grid.*.dat id xc yc f_1[*]
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- dump 1 grid all 300000 output/grid.*.dat id xc yc f_1[*]
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- dump_modify 1 format float %12.5g
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- compute 5 surf all air n press px py shx shy fx fy etot erot evib
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- fix 2 ave/surf all 1 ${nave} ${nave} c_5[*] ave running
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- fix 2 ave/surf all 1 10000 ${nave} c_5[*] ave running
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- fix 2 ave/surf all 1 10000 10000 c_5[*] ave running
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- dump 2 surf all ${noutput} output/surf.*.dat id v1x v1y v2x v2y f_2[*]
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- dump 2 surf all 300000 output/surf.*.dat id v1x v1y v2x v2y f_2[*]
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- dump_modify 2 format float %12.5g
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- compute 6 lambda/grid f_1[2] f_1[8] Ar kx
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- dump 3 grid all ${noutput} output/lambdakn.*.dat id xc yc c_6[*]
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- dump 3 grid all 300000 output/lambdakn.*.dat id xc yc c_6[*]
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- dump_modify 3 format float %12.5g
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- run 100000
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- Memory usage per proc in Mbytes:
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- particles (ave,min,max) = 1.6084 0 1.6875
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- grid (ave,min,max) = 1.51379 1.51379 1.51379
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- surf (ave,min,max) = 0.0205994 0.0205994 0.0205994
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- total (ave,min,max) = 3.16416 1.55571 3.24371
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- Step CPU Np Natt Ncoll Nscoll Npave Nscollave
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- 200000 0 58403 554 449 0 0 0
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- 210000 5.3012653 58018 593 487 4 58517.291 3.3417
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- 220000 10.924122 58388 613 512 3 58485.179 3.34155
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- 230000 16.562033 58538 615 501 3 58497.657 3.3398
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- 240000 22.047238 58430 623 510 2 58486.228 3.33735
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- 250000 27.278202 58685 630 518 2 58477.304 3.33922
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- 260000 34.002689 58517 578 483 3 58483.408 3.3461667
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- 270000 40.094562 58619 635 523 3 58489.35 3.3466286
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- 280000 45.80018 58478 558 467 6 58486.131 3.3472125
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- 290000 51.90135 58536 617 510 5 58493.749 3.3498667
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- 300000 57.253399 58672 567 475 6 58495.635 3.34922
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- Loop time of 57.2536 on 128 procs for 100000 steps with 58672 particles
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-
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- MPI task timing breakdown:
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- Section | min time | avg time | max time |%varavg| %total
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- ---------------------------------------------------------------
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- Move | 0.011074 | 0.74181 | 3.3922 | 97.9 | 1.30
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- Coll | 0.026688 | 0.45303 | 1.9835 | 64.1 | 0.79
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- Sort | 0.013081 | 0.10071 | 0.46129 | 34.0 | 0.18
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- Comm | 21.434 | 38.639 | 43.702 | 68.4 | 67.49
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- Modify | 0.345 | 2.0386 | 8.8752 | 152.7 | 3.56
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- Output | 0.018545 | 0.020001 | 0.023543 | 0.8 | 0.03
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- Other | | 15.26 | | | 26.65
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-
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- Particle moves = 5849563505 (5.85B)
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- Cells touched = 6141610248 (6.14B)
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- Particle comms = 39632421 (39.6M)
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- Boundary collides = 0 (0K)
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- Boundary exits = 3887011 (3.89M)
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- SurfColl checks = 18641346 (18.6M)
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- SurfColl occurs = 334922 (0.335M)
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- Surf reactions = 0 (0K)
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- Collide attempts = 62291373 (62.3M)
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- Collide occurs = 49715028 (49.7M)
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- Reactions = 0 (0K)
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- Particles stuck = 0
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- Axisymm bad moves = 0
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-
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- Particle-moves/CPUsec/proc: 798198
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- Particle-moves/step: 58495.6
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- Cell-touches/particle/step: 1.04993
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- Particle comm iterations/step: 1
291
- Particle fraction communicated: 0.00677528
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- Particle fraction colliding with boundary: 0
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- Particle fraction exiting boundary: 0.000664496
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- Surface-checks/particle/step: 0.00318679
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- Surface-collisions/particle/step: 5.72559e-05
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- Surf-reactions/particle/step: 0
297
- Collision-attempts/particle/step: 0.0106489
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- Collisions/particle/step: 0.00849893
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- Reactions/particle/step: 0
300
-
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- Particles: 458.375 ave 2374 max 0 min
302
- Histogram: 75 15 12 3 3 6 4 5 1 4
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- Cells: 62.875 ave 64 max 62 min
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- Histogram: 17 0 0 0 0 110 0 0 0 1
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- GhostCell: 1715.82 ave 3060 max 124 min
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- Histogram: 18 12 8 12 17 4 7 4 16 30
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- EmptyCell: 106.516 ave 174 max 30 min
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- Histogram: 5 5 16 9 14 19 28 19 11 2
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- Surfs: 200 ave 200 max 200 min
310
- Histogram: 128 0 0 0 0 0 0 0 0 0
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- GhostSurf: 0 ave 0 max 0 min
312
- Histogram: 128 0 0 0 0 0 0 0 0 0
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- write_grid grid/final-grid.dat
314
- grid cells = 8048
315
- CPU time = 0.00179726 secs
316
- write_surf surf/geom.surf
317
- surf elements = 200
318
- CPU time = 0.00162549 secs