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Browse files
CylinderKnMa//Kn1p00//simulation2355_Kn1p00Ma2p4//log.sparta
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| 1 |
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SPARTA (4 Sep 2024)
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Running on 128 MPI task(s)
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variable BZ equal 1.380649E-23
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| 4 |
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variable PI equal 3.1415926536
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| 5 |
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variable molecular_mass equal 6.63E-26
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| 6 |
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variable molecular_diameter equal 4.17E-10
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| 7 |
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variable gamma equal 1.666666667
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| 8 |
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variable R equal ${BZ}/${molecular_mass}
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variable R equal 1.380649e-23/${molecular_mass}
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variable R equal 1.380649e-23/6.63e-26
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| 11 |
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variable L equal 1.0
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| 12 |
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variable xmin equal -5.0
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variable xmax equal 6.0
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variable ymin equal -5.0
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variable ymax equal 5.0
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| 16 |
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variable Kn equal 1.0
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| 17 |
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variable Ma equal 2.4
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variable To equal 273.0
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variable Tb equal 273.0
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variable theta equal 0.0
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| 21 |
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variable mfp equal ${Kn}*${L}
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variable mfp equal 1*${L}
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| 23 |
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variable mfp equal 1*1
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| 24 |
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variable cpmfp equal 4
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| 25 |
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variable nden equal 1.0/sqrt(2.0)/${PI}/${molecular_diameter}/${molecular_diameter}/(${mfp}/${cpmfp}*${Kn})
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| 26 |
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variable nden equal 1.0/sqrt(2.0)/3.1415926536/${molecular_diameter}/${molecular_diameter}/(${mfp}/${cpmfp}*${Kn})
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| 27 |
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variable nden equal 1.0/sqrt(2.0)/3.1415926536/4.17e-10/${molecular_diameter}/(${mfp}/${cpmfp}*${Kn})
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| 28 |
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variable nden equal 1.0/sqrt(2.0)/3.1415926536/4.17e-10/4.17e-10/(${mfp}/${cpmfp}*${Kn})
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| 29 |
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variable nden equal 1.0/sqrt(2.0)/3.1415926536/4.17e-10/4.17e-10/(1/${cpmfp}*${Kn})
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| 30 |
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variable nden equal 1.0/sqrt(2.0)/3.1415926536/4.17e-10/4.17e-10/(1/4*${Kn})
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| 31 |
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variable nden equal 1.0/sqrt(2.0)/3.1415926536/4.17e-10/4.17e-10/(1/4*1)
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variable sos equal sqrt(${gamma}*${R}*${To})
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variable sos equal sqrt(1.666666667*${R}*${To})
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variable sos equal sqrt(1.666666667*208.242684766214*${To})
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| 35 |
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variable sos equal sqrt(1.666666667*208.242684766214*273)
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| 36 |
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variable vo equal ${Ma}*${sos}
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variable vo equal 2.4*${sos}
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| 38 |
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variable vo equal 2.4*307.815564238681
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variable vx equal ${vo}*cos(${theta}*2*PI/360)
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variable vx equal 738.757354172834*cos(${theta}*2*PI/360)
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| 41 |
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variable vx equal 738.757354172834*cos(0*2*PI/360)
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variable vy equal ${vo}*sin(${theta}*2*PI/360)
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variable vy equal 738.757354172834*sin(${theta}*2*PI/360)
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variable vy equal 738.757354172834*sin(0*2*PI/360)
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variable ppc equal 30
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variable xncells equal (${xmax}-${xmin})/${mfp}*${cpmfp}
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variable xncells equal (6-${xmin})/${mfp}*${cpmfp}
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variable xncells equal (6--5)/${mfp}*${cpmfp}
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variable xncells equal (6--5)/1*${cpmfp}
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variable xncells equal (6--5)/1*4
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variable yncells equal (${ymax}-${ymin})/${mfp}*${cpmfp}
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variable yncells equal (5-${ymin})/${mfp}*${cpmfp}
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| 53 |
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variable yncells equal (5--5)/${mfp}*${cpmfp}
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variable yncells equal (5--5)/1*${cpmfp}
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variable yncells equal (5--5)/1*4
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variable Fnum equal ${nden}*(${xmax}-${xmin})*(${ymax}-${ymin})/${ppc}/${xncells}/${yncells}
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variable Fnum equal 5.17753461204666e+18*(${xmax}-${xmin})*(${ymax}-${ymin})/${ppc}/${xncells}/${yncells}
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| 58 |
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variable Fnum equal 5.17753461204666e+18*(6-${xmin})*(${ymax}-${ymin})/${ppc}/${xncells}/${yncells}
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variable Fnum equal 5.17753461204666e+18*(6--5)*(${ymax}-${ymin})/${ppc}/${xncells}/${yncells}
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variable Fnum equal 5.17753461204666e+18*(6--5)*(5-${ymin})/${ppc}/${xncells}/${yncells}
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variable Fnum equal 5.17753461204666e+18*(6--5)*(5--5)/${ppc}/${xncells}/${yncells}
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variable Fnum equal 5.17753461204666e+18*(6--5)*(5--5)/30/${xncells}/${yncells}
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variable Fnum equal 5.17753461204666e+18*(6--5)*(5--5)/30/44/${yncells}
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variable Fnum equal 5.17753461204666e+18*(6--5)*(5--5)/30/44/40
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variable tstep equal (-${xmin}+${xmax})/${vx}/${xncells}/10/4
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variable tstep equal (--5+${xmax})/${vx}/${xncells}/10/4
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variable tstep equal (--5+6)/${vx}/${xncells}/10/4
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variable tstep equal (--5+6)/738.757354172834/${xncells}/10/4
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variable tstep equal (--5+6)/738.757354172834/44/10/4
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variable nave equal 10000
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variable noutput equal 300000
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clear
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Running on 128 MPI task(s)
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shell mkdir output
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shell mkdir grid
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shell mkdir surf
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seed 7
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dimension 2
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global nrho ${nden}
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global nrho 5.17753461204666e+18
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global fnum ${Fnum}
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global fnum 1.07865304417639e+16
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timestep ${tstep}
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timestep 8.46015266676831e-06
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global gridcut 1.0 particle/reorder 100 comm/sort yes
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region 1 cylinder z 0.0 0.0 3.50 -0.5 0.5
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region 2 cylinder z 0.0 0.0 2.00 -0.5 0.5
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region 3 cylinder z 0.0 0.0 0.80 -0.5 0.5
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boundary o o p
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create_box ${xmin} ${xmax} ${ymin} ${ymax} -0.5 0.5
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create_box -5 ${xmax} ${ymin} ${ymax} -0.5 0.5
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create_box -5 6 ${ymin} ${ymax} -0.5 0.5
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create_box -5 6 -5 ${ymax} -0.5 0.5
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create_box -5 6 -5 5 -0.5 0.5
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Created orthogonal box = (-5 -5 -0.5) to (6 5 0.5)
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create_grid ${xncells} ${yncells} 1 levels 4 region 2 1 2 2 1 region 3 2 2 2 1 region 4 3 2 2 1 clump xyz
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create_grid 44 ${yncells} 1 levels 4 region 2 1 2 2 1 region 3 2 2 2 1 region 4 3 2 2 1 clump xyz
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create_grid 44 40 1 levels 4 region 2 1 2 2 1 region 3 2 2 2 1 region 4 3 2 2 1 clump xyz
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Created 8048 child grid cells
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CPU time = 0.0705812 secs
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create/ghost percent = 1.46636 98.5336
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balance_grid rcb cell
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Balance grid migrated 8026 cells
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CPU time = 0.0717065 secs
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reassign/sort/migrate/ghost percent = 84.7625 0.0419627 9.09566 6.09985
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species gas.species Ar
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mixture air Ar frac 1.0
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mixture air Ar vstream ${vx} ${vy} 0.0 temp ${To}
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mixture air Ar vstream 738.757354172834 ${vy} 0.0 temp ${To}
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mixture air Ar vstream 738.757354172834 0 0.0 temp ${To}
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mixture air Ar vstream 738.757354172834 0 0.0 temp 273
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collide vss air gas.vhs
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collide_modify vremax 100 yes remain no nearcp yes 10
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read_surf cylinder.surf
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200 lines
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-0.5 0.5 xlo xhi
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-0.5 0.5 ylo yhi
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0 0 zlo zhi
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0.0157073 min line length
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132 0 = cells overlapping surfs, overlap cells with unmarked corner pts
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7184 732 132 = cells outside/inside/overlapping surfs
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132 = surf cells with 1,2,etc splits
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109.215 109.215 = cell-wise and global flow volume
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CPU time = 0.0955368 secs
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read/check/sort/surf2grid/ghost/inout/particle percent = 31.1054 37.3222 2.94065 23.4278 5.20399 6.1896 0.0207459
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surf2grid time = 0.0223822 secs
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map/comm1/comm2/comm3/comm4/split percent = 12.9167 25.8078 2.65885 2.02643 12.6718 7.18274
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surf_collide 1 diffuse 273.0 1.0
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surf_modify all collide 1
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fix in emit/face air xlo ylo yhi
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balance_grid rcb cell
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Balance grid migrated 506 cells
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CPU time = 0.0149571 secs
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reassign/sort/migrate/ghost percent = 14.7299 0.227116 62.8803 22.1627
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create_particles air n 0
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Created 52423 particles
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CPU time = 0.00937841 secs
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stats 10000
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stats_style step cpu np nattempt ncoll nscoll npave nscollave
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run 200000
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Memory usage per proc in Mbytes:
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particles (ave,min,max) = 1.59521 0 1.6875
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grid (ave,min,max) = 1.51379 1.51379 1.51379
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surf (ave,min,max) = 0.0205994 0.0205994 0.0205994
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total (ave,min,max) = 3.12961 1.53439 3.22189
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Step CPU Np Natt Ncoll Nscoll Npave Nscollave
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0 0 52423 0 0 0 0 0
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10000 4.9505991 58721 567 460 5 57248.577 3.3802
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20000 9.9839914 58420 519 435 5 57940.673 3.38845
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30000 15.309023 58556 542 453 5 58144.367 3.3988
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40000 20.137208 58571 579 492 4 58212.956 3.392
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50000 25.161714 58010 583 487 2 58270.137 3.39746
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60000 30.125851 58623 604 505 1 58311.922 3.4005833
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70000 35.62137 58742 564 473 5 58348.399 3.4017429
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80000 40.72707 58600 595 510 5 58392.65 3.402475
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90000 46.446041 58592 584 488 4 58411.406 3.4028111
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| 157 |
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100000 51.35092 58330 591 509 3 58424.344 3.40271
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110000 57.071957 58587 569 477 7 58432.007 3.4041364
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120000 62.000137 58869 563 479 5 58445.801 3.4040083
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130000 66.652517 58598 590 506 5 58470.977 3.4064385
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140000 72.214084 58463 577 472 4 58473.765 3.4051214
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150000 76.859991 58766 554 471 5 58482.091 3.4046933
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160000 81.913349 58369 557 469 3 58487.198 3.4048875
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170000 86.987864 58602 578 487 1 58490.83 3.4049294
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180000 91.929223 58449 548 463 2 58506.083 3.4036889
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190000 97.229154 58190 580 490 4 58507.173 3.4040632
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200000 102.56767 58472 567 477 2 58511.359 3.40394
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Loop time of 102.568 on 128 procs for 200000 steps with 58472 particles
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MPI task timing breakdown:
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Section | min time | avg time | max time |%varavg| %total
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---------------------------------------------------------------
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Move | 0.023509 | 1.4693 | 6.8399 | 138.5 | 1.43
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Coll | 0.057051 | 0.89402 | 3.9793 | 89.3 | 0.87
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Sort | 0.025708 | 0.19788 | 0.93614 | 48.3 | 0.19
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Comm | 43.649 | 78.105 | 88.325 | 98.2 | 76.15
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Modify | 0.017264 | 0.055716 | 0.8747 | 52.6 | 0.05
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Output | 0.0040291 | 0.0045757 | 0.0070946 | 0.9 | 0.00
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Other | | 21.84 | | | 21.29
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Particle moves = 11702271711 (11.7B)
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Cells touched = 12281706523 (12.3B)
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Particle comms = 78693836 (78.7M)
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| 184 |
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Boundary collides = 0 (0K)
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| 185 |
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Boundary exits = 7691935 (7.69M)
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| 186 |
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SurfColl checks = 39021821 (39M)
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SurfColl occurs = 680788 (0.681M)
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| 188 |
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Surf reactions = 0 (0K)
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| 189 |
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Collide attempts = 119887129 (120M)
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| 190 |
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Collide occurs = 95839037 (95.8M)
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| 191 |
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Reactions = 0 (0K)
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| 192 |
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Particles stuck = 0
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Axisymm bad moves = 0
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Particle-moves/CPUsec/proc: 891350
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Particle-moves/step: 58511.4
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| 197 |
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Cell-touches/particle/step: 1.04951
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| 198 |
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Particle comm iterations/step: 1
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| 199 |
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Particle fraction communicated: 0.00672466
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Particle fraction colliding with boundary: 0
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| 201 |
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Particle fraction exiting boundary: 0.000657303
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Surface-checks/particle/step: 0.00333455
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| 203 |
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Surface-collisions/particle/step: 5.81757e-05
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| 204 |
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Surf-reactions/particle/step: 0
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Collision-attempts/particle/step: 0.0102448
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| 206 |
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Collisions/particle/step: 0.00818978
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Reactions/particle/step: 0
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Particles: 456.812 ave 2360 max 0 min
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Histogram: 75 15 11 4 4 5 4 5 1 4
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Cells: 62.875 ave 64 max 62 min
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Histogram: 17 0 0 0 0 110 0 0 0 1
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| 213 |
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GhostCell: 1715.82 ave 3060 max 124 min
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Histogram: 18 12 8 12 17 4 7 4 16 30
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EmptyCell: 106.516 ave 174 max 30 min
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| 216 |
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Histogram: 5 5 16 9 14 19 28 19 11 2
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| 217 |
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Surfs: 200 ave 200 max 200 min
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| 218 |
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Histogram: 128 0 0 0 0 0 0 0 0 0
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| 219 |
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GhostSurf: 0 ave 0 max 0 min
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| 220 |
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Histogram: 128 0 0 0 0 0 0 0 0 0
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| 221 |
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compute 1 grid all air n nrho massrho u v w
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compute 2 grid all air trot
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| 223 |
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compute 3 tvib/grid all air
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| 224 |
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compute 4 thermal/grid all air press temp
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| 225 |
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fix 1 ave/grid all 1 ${nave} ${nave} c_1[*] c_4[*] c_2[*] c_3[*] ave running
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| 226 |
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fix 1 ave/grid all 1 10000 ${nave} c_1[*] c_4[*] c_2[*] c_3[*] ave running
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| 227 |
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fix 1 ave/grid all 1 10000 10000 c_1[*] c_4[*] c_2[*] c_3[*] ave running
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| 228 |
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dump 1 grid all ${noutput} output/grid.*.dat id xc yc f_1[*]
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| 229 |
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dump 1 grid all 300000 output/grid.*.dat id xc yc f_1[*]
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| 230 |
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dump_modify 1 format float %12.5g
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| 231 |
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compute 5 surf all air n press px py shx shy fx fy etot erot evib
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| 232 |
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fix 2 ave/surf all 1 ${nave} ${nave} c_5[*] ave running
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| 233 |
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fix 2 ave/surf all 1 10000 ${nave} c_5[*] ave running
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| 234 |
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fix 2 ave/surf all 1 10000 10000 c_5[*] ave running
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| 235 |
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dump 2 surf all ${noutput} output/surf.*.dat id v1x v1y v2x v2y f_2[*]
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| 236 |
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dump 2 surf all 300000 output/surf.*.dat id v1x v1y v2x v2y f_2[*]
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| 237 |
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dump_modify 2 format float %12.5g
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| 238 |
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compute 6 lambda/grid f_1[2] f_1[8] Ar kx
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| 239 |
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dump 3 grid all ${noutput} output/lambdakn.*.dat id xc yc c_6[*]
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| 240 |
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dump 3 grid all 300000 output/lambdakn.*.dat id xc yc c_6[*]
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| 241 |
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dump_modify 3 format float %12.5g
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| 242 |
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run 100000
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| 243 |
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Memory usage per proc in Mbytes:
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| 244 |
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particles (ave,min,max) = 1.6084 0 1.6875
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| 245 |
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grid (ave,min,max) = 1.51379 1.51379 1.51379
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| 246 |
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surf (ave,min,max) = 0.0205994 0.0205994 0.0205994
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| 247 |
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total (ave,min,max) = 3.16416 1.55571 3.24371
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| 248 |
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Step CPU Np Natt Ncoll Nscoll Npave Nscollave
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200000 0 58472 567 477 0 0 0
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| 250 |
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210000 6.1732471 58542 586 499 2 58640.543 3.4244
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| 251 |
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220000 11.87793 58550 576 477 3 58617.541 3.4167
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| 252 |
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230000 18.251519 58741 581 493 3 58600.297 3.4159667
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| 253 |
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240000 23.74248 58611 554 459 7 58589.486 3.40545
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| 254 |
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250000 29.987222 58589 544 454 2 58601.603 3.41324
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| 255 |
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260000 35.287467 58737 591 504 2 58600.778 3.4172667
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| 256 |
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270000 40.997353 58743 574 486 2 58612.194 3.4190286
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| 257 |
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280000 46.705407 58550 548 456 4 58602.122 3.4184
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| 258 |
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290000 52.925312 58918 546 448 1 58599.116 3.4193889
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| 259 |
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300000 58.856858 58316 557 479 2 58594.677 3.41657
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| 260 |
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Loop time of 58.857 on 128 procs for 100000 steps with 58316 particles
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| 261 |
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| 262 |
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MPI task timing breakdown:
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| 263 |
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Section | min time | avg time | max time |%varavg| %total
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---------------------------------------------------------------
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Move | 0.011603 | 0.73489 | 3.4104 | 97.7 | 1.25
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| 266 |
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Coll | 0.027484 | 0.44987 | 2.0087 | 63.5 | 0.76
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| 267 |
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Sort | 0.013034 | 0.10039 | 0.47032 | 34.2 | 0.17
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| 268 |
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Comm | 22.627 | 39.888 | 45.31 | 69.5 | 67.77
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| 269 |
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Modify | 0.3455 | 2.0142 | 8.8649 | 151.2 | 3.42
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| 270 |
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Output | 0.018634 | 0.020066 | 0.023635 | 0.8 | 0.03
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| 271 |
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Other | | 15.65 | | | 26.59
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| 273 |
-
Particle moves = 5859467732 (5.86B)
|
| 274 |
-
Cells touched = 6149562024 (6.15B)
|
| 275 |
-
Particle comms = 39395872 (39.4M)
|
| 276 |
-
Boundary collides = 0 (0K)
|
| 277 |
-
Boundary exits = 3849615 (3.85M)
|
| 278 |
-
SurfColl checks = 19564709 (19.6M)
|
| 279 |
-
SurfColl occurs = 341657 (0.342M)
|
| 280 |
-
Surf reactions = 0 (0K)
|
| 281 |
-
Collide attempts = 60135101 (60.1M)
|
| 282 |
-
Collide occurs = 48077067 (48.1M)
|
| 283 |
-
Reactions = 0 (0K)
|
| 284 |
-
Particles stuck = 0
|
| 285 |
-
Axisymm bad moves = 0
|
| 286 |
-
|
| 287 |
-
Particle-moves/CPUsec/proc: 777767
|
| 288 |
-
Particle-moves/step: 58594.7
|
| 289 |
-
Cell-touches/particle/step: 1.04951
|
| 290 |
-
Particle comm iterations/step: 1
|
| 291 |
-
Particle fraction communicated: 0.00672346
|
| 292 |
-
Particle fraction colliding with boundary: 0
|
| 293 |
-
Particle fraction exiting boundary: 0.000656991
|
| 294 |
-
Surface-checks/particle/step: 0.00333899
|
| 295 |
-
Surface-collisions/particle/step: 5.83085e-05
|
| 296 |
-
Surf-reactions/particle/step: 0
|
| 297 |
-
Collision-attempts/particle/step: 0.0102629
|
| 298 |
-
Collisions/particle/step: 0.00820502
|
| 299 |
-
Reactions/particle/step: 0
|
| 300 |
-
|
| 301 |
-
Particles: 455.594 ave 2381 max 0 min
|
| 302 |
-
Histogram: 75 15 10 5 3 8 4 4 0 4
|
| 303 |
-
Cells: 62.875 ave 64 max 62 min
|
| 304 |
-
Histogram: 17 0 0 0 0 110 0 0 0 1
|
| 305 |
-
GhostCell: 1715.82 ave 3060 max 124 min
|
| 306 |
-
Histogram: 18 12 8 12 17 4 7 4 16 30
|
| 307 |
-
EmptyCell: 106.516 ave 174 max 30 min
|
| 308 |
-
Histogram: 5 5 16 9 14 19 28 19 11 2
|
| 309 |
-
Surfs: 200 ave 200 max 200 min
|
| 310 |
-
Histogram: 128 0 0 0 0 0 0 0 0 0
|
| 311 |
-
GhostSurf: 0 ave 0 max 0 min
|
| 312 |
-
Histogram: 128 0 0 0 0 0 0 0 0 0
|
| 313 |
-
write_grid grid/final-grid.dat
|
| 314 |
-
grid cells = 8048
|
| 315 |
-
CPU time = 0.00183321 secs
|
| 316 |
-
write_surf surf/geom.surf
|
| 317 |
-
surf elements = 200
|
| 318 |
-
CPU time = 0.00162445 secs
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