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Upload CylinderKnMa\Kn1p00\simulation2356_Kn1p00Ma2p5\log.sparta with huggingface_hub

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  1. CylinderKnMa//Kn1p00//simulation2356_Kn1p00Ma2p5//log.sparta +318 -0
CylinderKnMa//Kn1p00//simulation2356_Kn1p00Ma2p5//log.sparta ADDED
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1
+ SPARTA (4 Sep 2024)
2
+ Running on 128 MPI task(s)
3
+ variable BZ equal 1.380649E-23
4
+ variable PI equal 3.1415926536
5
+ variable molecular_mass equal 6.63E-26
6
+ variable molecular_diameter equal 4.17E-10
7
+ variable gamma equal 1.666666667
8
+ variable R equal ${BZ}/${molecular_mass}
9
+ variable R equal 1.380649e-23/${molecular_mass}
10
+ variable R equal 1.380649e-23/6.63e-26
11
+ variable L equal 1.0
12
+ variable xmin equal -5.0
13
+ variable xmax equal 6.0
14
+ variable ymin equal -5.0
15
+ variable ymax equal 5.0
16
+ variable Kn equal 1.0
17
+ variable Ma equal 2.5
18
+ variable To equal 273.0
19
+ variable Tb equal 273.0
20
+ variable theta equal 0.0
21
+ variable mfp equal ${Kn}*${L}
22
+ variable mfp equal 1*${L}
23
+ variable mfp equal 1*1
24
+ variable cpmfp equal 4
25
+ variable nden equal 1.0/sqrt(2.0)/${PI}/${molecular_diameter}/${molecular_diameter}/(${mfp}/${cpmfp}*${Kn})
26
+ variable nden equal 1.0/sqrt(2.0)/3.1415926536/${molecular_diameter}/${molecular_diameter}/(${mfp}/${cpmfp}*${Kn})
27
+ variable nden equal 1.0/sqrt(2.0)/3.1415926536/4.17e-10/${molecular_diameter}/(${mfp}/${cpmfp}*${Kn})
28
+ variable nden equal 1.0/sqrt(2.0)/3.1415926536/4.17e-10/4.17e-10/(${mfp}/${cpmfp}*${Kn})
29
+ variable nden equal 1.0/sqrt(2.0)/3.1415926536/4.17e-10/4.17e-10/(1/${cpmfp}*${Kn})
30
+ variable nden equal 1.0/sqrt(2.0)/3.1415926536/4.17e-10/4.17e-10/(1/4*${Kn})
31
+ variable nden equal 1.0/sqrt(2.0)/3.1415926536/4.17e-10/4.17e-10/(1/4*1)
32
+ variable sos equal sqrt(${gamma}*${R}*${To})
33
+ variable sos equal sqrt(1.666666667*${R}*${To})
34
+ variable sos equal sqrt(1.666666667*208.242684766214*${To})
35
+ variable sos equal sqrt(1.666666667*208.242684766214*273)
36
+ variable vo equal ${Ma}*${sos}
37
+ variable vo equal 2.5*${sos}
38
+ variable vo equal 2.5*307.815564238681
39
+ variable vx equal ${vo}*cos(${theta}*2*PI/360)
40
+ variable vx equal 769.538910596703*cos(${theta}*2*PI/360)
41
+ variable vx equal 769.538910596703*cos(0*2*PI/360)
42
+ variable vy equal ${vo}*sin(${theta}*2*PI/360)
43
+ variable vy equal 769.538910596703*sin(${theta}*2*PI/360)
44
+ variable vy equal 769.538910596703*sin(0*2*PI/360)
45
+ variable ppc equal 30
46
+ variable xncells equal (${xmax}-${xmin})/${mfp}*${cpmfp}
47
+ variable xncells equal (6-${xmin})/${mfp}*${cpmfp}
48
+ variable xncells equal (6--5)/${mfp}*${cpmfp}
49
+ variable xncells equal (6--5)/1*${cpmfp}
50
+ variable xncells equal (6--5)/1*4
51
+ variable yncells equal (${ymax}-${ymin})/${mfp}*${cpmfp}
52
+ variable yncells equal (5-${ymin})/${mfp}*${cpmfp}
53
+ variable yncells equal (5--5)/${mfp}*${cpmfp}
54
+ variable yncells equal (5--5)/1*${cpmfp}
55
+ variable yncells equal (5--5)/1*4
56
+ variable Fnum equal ${nden}*(${xmax}-${xmin})*(${ymax}-${ymin})/${ppc}/${xncells}/${yncells}
57
+ variable Fnum equal 5.17753461204666e+18*(${xmax}-${xmin})*(${ymax}-${ymin})/${ppc}/${xncells}/${yncells}
58
+ variable Fnum equal 5.17753461204666e+18*(6-${xmin})*(${ymax}-${ymin})/${ppc}/${xncells}/${yncells}
59
+ variable Fnum equal 5.17753461204666e+18*(6--5)*(${ymax}-${ymin})/${ppc}/${xncells}/${yncells}
60
+ variable Fnum equal 5.17753461204666e+18*(6--5)*(5-${ymin})/${ppc}/${xncells}/${yncells}
61
+ variable Fnum equal 5.17753461204666e+18*(6--5)*(5--5)/${ppc}/${xncells}/${yncells}
62
+ variable Fnum equal 5.17753461204666e+18*(6--5)*(5--5)/30/${xncells}/${yncells}
63
+ variable Fnum equal 5.17753461204666e+18*(6--5)*(5--5)/30/44/${yncells}
64
+ variable Fnum equal 5.17753461204666e+18*(6--5)*(5--5)/30/44/40
65
+ variable tstep equal (-${xmin}+${xmax})/${vx}/${xncells}/10/4
66
+ variable tstep equal (--5+${xmax})/${vx}/${xncells}/10/4
67
+ variable tstep equal (--5+6)/${vx}/${xncells}/10/4
68
+ variable tstep equal (--5+6)/769.538910596703/${xncells}/10/4
69
+ variable tstep equal (--5+6)/769.538910596703/44/10/4
70
+ variable nave equal 10000
71
+ variable noutput equal 300000
72
+ clear
73
+ Running on 128 MPI task(s)
74
+ shell mkdir output
75
+ shell mkdir grid
76
+ shell mkdir surf
77
+ seed 7
78
+ dimension 2
79
+ global nrho ${nden}
80
+ global nrho 5.17753461204666e+18
81
+ global fnum ${Fnum}
82
+ global fnum 1.07865304417639e+16
83
+ timestep ${tstep}
84
+ timestep 8.12174656009756e-06
85
+ global gridcut 1.0 particle/reorder 100 comm/sort yes
86
+ region 1 cylinder z 0.0 0.0 3.50 -0.5 0.5
87
+ region 2 cylinder z 0.0 0.0 2.00 -0.5 0.5
88
+ region 3 cylinder z 0.0 0.0 0.80 -0.5 0.5
89
+ boundary o o p
90
+ create_box ${xmin} ${xmax} ${ymin} ${ymax} -0.5 0.5
91
+ create_box -5 ${xmax} ${ymin} ${ymax} -0.5 0.5
92
+ create_box -5 6 ${ymin} ${ymax} -0.5 0.5
93
+ create_box -5 6 -5 ${ymax} -0.5 0.5
94
+ create_box -5 6 -5 5 -0.5 0.5
95
+ Created orthogonal box = (-5 -5 -0.5) to (6 5 0.5)
96
+ create_grid ${xncells} ${yncells} 1 levels 4 region 2 1 2 2 1 region 3 2 2 2 1 region 4 3 2 2 1 clump xyz
97
+ create_grid 44 ${yncells} 1 levels 4 region 2 1 2 2 1 region 3 2 2 2 1 region 4 3 2 2 1 clump xyz
98
+ create_grid 44 40 1 levels 4 region 2 1 2 2 1 region 3 2 2 2 1 region 4 3 2 2 1 clump xyz
99
+ Created 8048 child grid cells
100
+ CPU time = 0.0627119 secs
101
+ create/ghost percent = 1.70518 98.2948
102
+ balance_grid rcb cell
103
+ Balance grid migrated 8026 cells
104
+ CPU time = 0.0714 secs
105
+ reassign/sort/migrate/ghost percent = 84.332 0.0339215 9.25928 6.37483
106
+ species gas.species Ar
107
+ mixture air Ar frac 1.0
108
+ mixture air Ar vstream ${vx} ${vy} 0.0 temp ${To}
109
+ mixture air Ar vstream 769.538910596703 ${vy} 0.0 temp ${To}
110
+ mixture air Ar vstream 769.538910596703 0 0.0 temp ${To}
111
+ mixture air Ar vstream 769.538910596703 0 0.0 temp 273
112
+ collide vss air gas.vhs
113
+ collide_modify vremax 100 yes remain no nearcp yes 10
114
+ read_surf cylinder.surf
115
+ 200 lines
116
+ -0.5 0.5 xlo xhi
117
+ -0.5 0.5 ylo yhi
118
+ 0 0 zlo zhi
119
+ 0.0157073 min line length
120
+ 132 0 = cells overlapping surfs, overlap cells with unmarked corner pts
121
+ 7184 732 132 = cells outside/inside/overlapping surfs
122
+ 132 = surf cells with 1,2,etc splits
123
+ 109.215 109.215 = cell-wise and global flow volume
124
+ CPU time = 0.103255 secs
125
+ read/check/sort/surf2grid/ghost/inout/particle percent = 32.8745 38.6403 2.54503 21.0441 4.89609 5.53523 0.075918
126
+ surf2grid time = 0.021729 secs
127
+ map/comm1/comm2/comm3/comm4/split percent = 12.9649 26.04 2.28646 1.82648 12.8392 7.27118
128
+ surf_collide 1 diffuse 273.0 1.0
129
+ surf_modify all collide 1
130
+ fix in emit/face air xlo ylo yhi
131
+ balance_grid rcb cell
132
+ Balance grid migrated 506 cells
133
+ CPU time = 0.015066 secs
134
+ reassign/sort/migrate/ghost percent = 18.5256 0.177552 58.4464 22.8504
135
+ create_particles air n 0
136
+ Created 52423 particles
137
+ CPU time = 0.00936401 secs
138
+ stats 10000
139
+ stats_style step cpu np nattempt ncoll nscoll npave nscollave
140
+ run 200000
141
+ Memory usage per proc in Mbytes:
142
+ particles (ave,min,max) = 1.59521 0 1.6875
143
+ grid (ave,min,max) = 1.51379 1.51379 1.51379
144
+ surf (ave,min,max) = 0.0205994 0.0205994 0.0205994
145
+ total (ave,min,max) = 3.12961 1.53439 3.22189
146
+ Step CPU Np Natt Ncoll Nscoll Npave Nscollave
147
+ 0 0 52423 0 0 0 0 0
148
+ 10000 6.003215 58747 547 457 6 57284.935 3.4297
149
+ 20000 10.640105 58675 521 440 4 58024.151 3.46275
150
+ 30000 15.567376 58534 574 490 5 58217.122 3.4542667
151
+ 40000 21.266546 58811 583 496 5 58323.361 3.462525
152
+ 50000 26.141431 58325 562 466 6 58379.923 3.45614
153
+ 60000 30.770502 58699 555 453 5 58402.419 3.4619667
154
+ 70000 36.780374 58740 527 450 2 58451.616 3.4666143
155
+ 80000 41.478008 58695 553 467 2 58487.731 3.469075
156
+ 90000 46.403216 58583 517 429 1 58509.888 3.4664222
157
+ 100000 51.445067 58641 548 459 2 58516.331 3.46394
158
+ 110000 56.34493 58621 530 456 3 58526.522 3.4666727
159
+ 120000 60.991147 58686 534 460 3 58546.191 3.4649667
160
+ 130000 66.894062 58906 546 456 2 58562.882 3.4648462
161
+ 140000 71.488696 58514 515 437 1 58566.164 3.4639571
162
+ 150000 76.350175 58660 520 438 4 58574.254 3.46362
163
+ 160000 81.37781 58373 518 436 2 58581.352 3.4643437
164
+ 170000 86.882929 58653 553 470 4 58591.304 3.4645647
165
+ 180000 91.913631 58643 553 458 2 58601.086 3.4635556
166
+ 190000 97.507358 58392 547 477 6 58599.983 3.4610211
167
+ 200000 102.16257 58806 547 471 6 58605.418 3.46083
168
+ Loop time of 102.163 on 128 procs for 200000 steps with 58806 particles
169
+
170
+ MPI task timing breakdown:
171
+ Section | min time | avg time | max time |%varavg| %total
172
+ ---------------------------------------------------------------
173
+ Move | 0.022343 | 1.4894 | 7.2597 | 140.8 | 1.46
174
+ Coll | 0.056207 | 0.88822 | 3.9379 | 89.5 | 0.87
175
+ Sort | 0.026059 | 0.2005 | 0.94033 | 48.8 | 0.20
176
+ Comm | 44.773 | 77.399 | 87.373 | 97.8 | 75.76
177
+ Modify | 0.017243 | 0.055534 | 0.85519 | 52.5 | 0.05
178
+ Output | 0.0043738 | 0.0050951 | 0.009068 | 1.0 | 0.00
179
+ Other | | 22.13 | | | 21.66
180
+
181
+ Particle moves = 11721083669 (11.7B)
182
+ Cells touched = 12296905060 (12.3B)
183
+ Particle comms = 78285306 (78.3M)
184
+ Boundary collides = 0 (0K)
185
+ Boundary exits = 7624480 (7.62M)
186
+ SurfColl checks = 40655162 (40.7M)
187
+ SurfColl occurs = 692166 (0.692M)
188
+ Surf reactions = 0 (0K)
189
+ Collide attempts = 115862616 (116M)
190
+ Collide occurs = 92752942 (92.8M)
191
+ Reactions = 0 (0K)
192
+ Particles stuck = 0
193
+ Axisymm bad moves = 0
194
+
195
+ Particle-moves/CPUsec/proc: 896322
196
+ Particle-moves/step: 58605.4
197
+ Cell-touches/particle/step: 1.04913
198
+ Particle comm iterations/step: 1
199
+ Particle fraction communicated: 0.00667902
200
+ Particle fraction colliding with boundary: 0
201
+ Particle fraction exiting boundary: 0.000650493
202
+ Surface-checks/particle/step: 0.00346855
203
+ Surface-collisions/particle/step: 5.90531e-05
204
+ Surf-reactions/particle/step: 0
205
+ Collision-attempts/particle/step: 0.00988497
206
+ Collisions/particle/step: 0.00791334
207
+ Reactions/particle/step: 0
208
+
209
+ Particles: 459.422 ave 2466 max 0 min
210
+ Histogram: 78 14 10 4 4 7 3 4 0 4
211
+ Cells: 62.875 ave 64 max 62 min
212
+ Histogram: 17 0 0 0 0 110 0 0 0 1
213
+ GhostCell: 1715.82 ave 3060 max 124 min
214
+ Histogram: 18 12 8 12 17 4 7 4 16 30
215
+ EmptyCell: 106.516 ave 174 max 30 min
216
+ Histogram: 5 5 16 9 14 19 28 19 11 2
217
+ Surfs: 200 ave 200 max 200 min
218
+ Histogram: 128 0 0 0 0 0 0 0 0 0
219
+ GhostSurf: 0 ave 0 max 0 min
220
+ Histogram: 128 0 0 0 0 0 0 0 0 0
221
+ compute 1 grid all air n nrho massrho u v w
222
+ compute 2 grid all air trot
223
+ compute 3 tvib/grid all air
224
+ compute 4 thermal/grid all air press temp
225
+ fix 1 ave/grid all 1 ${nave} ${nave} c_1[*] c_4[*] c_2[*] c_3[*] ave running
226
+ fix 1 ave/grid all 1 10000 ${nave} c_1[*] c_4[*] c_2[*] c_3[*] ave running
227
+ fix 1 ave/grid all 1 10000 10000 c_1[*] c_4[*] c_2[*] c_3[*] ave running
228
+ dump 1 grid all ${noutput} output/grid.*.dat id xc yc f_1[*]
229
+ dump 1 grid all 300000 output/grid.*.dat id xc yc f_1[*]
230
+ dump_modify 1 format float %12.5g
231
+ compute 5 surf all air n press px py shx shy fx fy etot erot evib
232
+ fix 2 ave/surf all 1 ${nave} ${nave} c_5[*] ave running
233
+ fix 2 ave/surf all 1 10000 ${nave} c_5[*] ave running
234
+ fix 2 ave/surf all 1 10000 10000 c_5[*] ave running
235
+ dump 2 surf all ${noutput} output/surf.*.dat id v1x v1y v2x v2y f_2[*]
236
+ dump 2 surf all 300000 output/surf.*.dat id v1x v1y v2x v2y f_2[*]
237
+ dump_modify 2 format float %12.5g
238
+ compute 6 lambda/grid f_1[2] f_1[8] Ar kx
239
+ dump 3 grid all ${noutput} output/lambdakn.*.dat id xc yc c_6[*]
240
+ dump 3 grid all 300000 output/lambdakn.*.dat id xc yc c_6[*]
241
+ dump_modify 3 format float %12.5g
242
+ run 100000
243
+ Memory usage per proc in Mbytes:
244
+ particles (ave,min,max) = 1.6084 0 1.6875
245
+ grid (ave,min,max) = 1.51379 1.51379 1.51379
246
+ surf (ave,min,max) = 0.0205994 0.0205994 0.0205994
247
+ total (ave,min,max) = 3.16416 1.55571 3.24371
248
+ Step CPU Np Natt Ncoll Nscoll Npave Nscollave
249
+ 200000 0 58806 547 471 0 0 0
250
+ 210000 5.6182756 58591 567 479 4 58793.111 3.4793
251
+ 220000 11.30115 58568 576 497 4 58749.983 3.4867
252
+ 230000 16.882213 58419 570 478 1 58702.58 3.4707
253
+ 240000 23.664103 58795 506 416 3 58676.503 3.4579
254
+ 250000 28.994512 58704 588 501 3 58681.537 3.45704
255
+ 260000 34.558835 58802 558 470 1 58679.292 3.4594667
256
+ 270000 40.318844 58468 565 471 2 58690.753 3.4583
257
+ 280000 46.470341 58802 512 428 1 58678.551 3.459525
258
+ 290000 53.112049 58415 532 437 4 58679.523 3.4605778
259
+ 300000 58.506072 58766 540 446 2 58680.769 3.4619
260
+ Loop time of 58.5063 on 128 procs for 100000 steps with 58766 particles
261
+
262
+ MPI task timing breakdown:
263
+ Section | min time | avg time | max time |%varavg| %total
264
+ ---------------------------------------------------------------
265
+ Move | 0.011091 | 0.74715 | 3.6236 | 99.3 | 1.28
266
+ Coll | 0.027311 | 0.44632 | 1.9834 | 63.3 | 0.76
267
+ Sort | 0.013546 | 0.10104 | 0.47511 | 34.5 | 0.17
268
+ Comm | 22.533 | 39.045 | 44.348 | 70.5 | 66.74
269
+ Modify | 0.36197 | 2.0644 | 9.1179 | 152.5 | 3.53
270
+ Output | 0.019243 | 0.034461 | 0.043278 | 4.8 | 0.06
271
+ Other | | 16.07 | | | 27.46
272
+
273
+ Particle moves = 5868076854 (5.87B)
274
+ Cells touched = 6156243091 (6.16B)
275
+ Particle comms = 39172667 (39.2M)
276
+ Boundary collides = 0 (0K)
277
+ Boundary exits = 3815338 (3.82M)
278
+ SurfColl checks = 20293887 (20.3M)
279
+ SurfColl occurs = 346190 (0.346M)
280
+ Surf reactions = 0 (0K)
281
+ Collide attempts = 58091907 (58.1M)
282
+ Collide occurs = 46519004 (46.5M)
283
+ Reactions = 0 (0K)
284
+ Particles stuck = 0
285
+ Axisymm bad moves = 0
286
+
287
+ Particle-moves/CPUsec/proc: 783580
288
+ Particle-moves/step: 58680.8
289
+ Cell-touches/particle/step: 1.04911
290
+ Particle comm iterations/step: 1
291
+ Particle fraction communicated: 0.00667555
292
+ Particle fraction colliding with boundary: 0
293
+ Particle fraction exiting boundary: 0.000650185
294
+ Surface-checks/particle/step: 0.00345835
295
+ Surface-collisions/particle/step: 5.89955e-05
296
+ Surf-reactions/particle/step: 0
297
+ Collision-attempts/particle/step: 0.00989965
298
+ Collisions/particle/step: 0.00792747
299
+ Reactions/particle/step: 0
300
+
301
+ Particles: 459.109 ave 2414 max 0 min
302
+ Histogram: 78 13 12 2 3 7 3 6 0 4
303
+ Cells: 62.875 ave 64 max 62 min
304
+ Histogram: 17 0 0 0 0 110 0 0 0 1
305
+ GhostCell: 1715.82 ave 3060 max 124 min
306
+ Histogram: 18 12 8 12 17 4 7 4 16 30
307
+ EmptyCell: 106.516 ave 174 max 30 min
308
+ Histogram: 5 5 16 9 14 19 28 19 11 2
309
+ Surfs: 200 ave 200 max 200 min
310
+ Histogram: 128 0 0 0 0 0 0 0 0 0
311
+ GhostSurf: 0 ave 0 max 0 min
312
+ Histogram: 128 0 0 0 0 0 0 0 0 0
313
+ write_grid grid/final-grid.dat
314
+ grid cells = 8048
315
+ CPU time = 0.00179314 secs
316
+ write_surf surf/geom.surf
317
+ surf elements = 200
318
+ CPU time = 0.00188155 secs