GWASLab-Reference / md5sum.txt
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Add dataset card, checksums, EAF, rsID tables, recombination maps, and example sumstats
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# 1KG hg19 VCF
b486381ac2e475381e8184b2c7c165e4 1kg/hg19/AFR.ALL.split_norm_af.1kgp3v5.hg19.vcf.gz
f9daa2144063c327006e4cffcae21510 1kg/hg19/AMR.ALL.split_norm_af.1kgp3v5.hg19.vcf.gz
6162a93cb80935168c0bfa519748b054 1kg/hg19/EAS.ALL.split_norm_af.1kgp3v5.hg19.vcf.gz
2c78cb84cb1f90b576510decc45e5b9b 1kg/hg19/EUR.ALL.split_norm_af.1kgp3v5.hg19.vcf.gz
8f9eca55f9fc25e2a58a013a1ae0a9af 1kg/hg19/PAN.ALL.split_norm_af.1kgp3v5.hg19.vcf.gz
fdf1c9831d74ae8e9c3960865cf7c22c 1kg/hg19/SAS.ALL.split_norm_af.1kgp3v5.hg19.vcf.gz
# 1KG hg38 VCF
f1e0657ee7549915e5bde2f6324b0e57 1kg/hg38/AFR.ALL.split_norm_af.1kg_30x.hg38.vcf.gz
f4109fc1e23c0eb62762caaf4bed24d5 1kg/hg38/AMR.ALL.split_norm_af.1kg_30x.hg38.vcf.gz
5360451ef7f31cb44471144e427e6cfe 1kg/hg38/EAS.ALL.split_norm_af.1kg_30x.hg38.vcf.gz
9e1aa56d8b843fef724b67e23932c95b 1kg/hg38/EUR.ALL.split_norm_af.1kg_30x.hg38.vcf.gz
32e160c40d5463befff35ab6e1310349 1kg/hg38/PAN.ALL.split_norm_af.1kg_30x.hg38.vcf.gz
59fbbf0f30a7ad2f13a04b035e5dc373 1kg/hg38/SAS.ALL.split_norm_af.1kg_30x.hg38.vcf.gz
# tabix indexes
1a49d63b73fc1cc243bb1932b6c7690d 1kg/hg19/AFR.ALL.split_norm_af.1kgp3v5.hg19.vcf.gz.tbi
2eea9760f51c62c234935bd0a9b12e6b 1kg/hg19/AMR.ALL.split_norm_af.1kgp3v5.hg19.vcf.gz.tbi
0851e30153abe5ce8caefadbd421b678 1kg/hg19/EAS.ALL.split_norm_af.1kgp3v5.hg19.vcf.gz.tbi
3f0dec75d1c4ead3fb6dbee83696e3b8 1kg/hg19/EUR.ALL.split_norm_af.1kgp3v5.hg19.vcf.gz.tbi
02deef47840eee2beb81bb91098a0517 1kg/hg19/PAN.ALL.split_norm_af.1kgp3v5.hg19.vcf.gz.tbi
e13f282d76fe62b58f67cc9ac88e8440 1kg/hg19/SAS.ALL.split_norm_af.1kgp3v5.hg19.vcf.gz.tbi
41caa99dc9ef1760a2aef7592c474d5f 1kg/hg38/AFR.ALL.split_norm_af.1kg_30x.hg38.vcf.gz.tbi
d2fb51f54951708b08a4986c50705c1b 1kg/hg38/AMR.ALL.split_norm_af.1kg_30x.hg38.vcf.gz.tbi
81991f2229546b6aff0a54abf6215ef7 1kg/hg38/EAS.ALL.split_norm_af.1kg_30x.hg38.vcf.gz.tbi
37682637bc74ac49e98a317d063800eb 1kg/hg38/EUR.ALL.split_norm_af.1kg_30x.hg38.vcf.gz.tbi
4bdf8242ae376dc3d6ba16e6e2dbcfa0 1kg/hg38/PAN.ALL.split_norm_af.1kg_30x.hg38.vcf.gz.tbi
237438ed7ff2862ab43fb138f712aabc 1kg/hg38/SAS.ALL.split_norm_af.1kg_30x.hg38.vcf.gz.tbi
# rsID tables
7d1e7624fb6e4df7a2f6f05558d436b4 rsid/1kg_dbsnp151_hg19_auto.txt.gz
4c7ef2d2415c18c286219e970fdda972 rsid/1kg_dbsnp151_hg38_auto.txt.gz
# HapMap3 EAF
ee95afbfb1899849f91fdb55fae8e567 eaf/PAN.hapmap3.hg19.EAF.tsv.gz
6d41ce4af02711a532c19f1b1a5911c2 eaf/PAN.hapmap3.hg38.EAF.tsv.gz
# recombination maps
038255f22a8664d44f9fb907cfec3f4e recombination/recombination_hg19.tar.gz
dbeca47a92cfff4fd13aa217e21957e3 recombination/recombination_hg38.tar.gz
# example sumstats
67f9d8f49e75a8e2a9d38edf8800ebb9 examples/t2d_bbj.txt.gz