batch_00093: 21 DX slide + RNA pairs

.gitattributes

@@ -9977,3 +9977,91 @@ slides/TCGA-COAD/TCGA-QG-A5Z1/TCGA-QG-A5Z1-01Z-00-DX2/5068bcd3-1f63-446c-b841-40
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pairs/TCGA-COAD/088becfc1b3b431be782d6af.json

@@ -0,0 +1,33 @@
+{
+  "pair_id": "088becfc1b3b431be782d6af",
+  "project": "TCGA-COAD",
+  "patient_id": "TCGA-WS-AB45",
+  "match_level": "same_patient_sample_type",
+  "slide": {
+    "source": "IDC",
+    "format": "DICOM",
+    "barcode": "TCGA-WS-AB45-01Z-00-DX1",
+    "series_uid": "1.3.6.1.4.1.5962.99.1.3231353107.737382661.1639613925651.2.0",
+    "description": "FFPE HE TP DX1",
+    "sample_code": "01",
+    "path": "slides/TCGA-COAD/TCGA-WS-AB45/TCGA-WS-AB45-01Z-00-DX1",
+    "files": [
+      "4fa6d12e-b2c5-4a30-ab4a-e0db5c4e5012.dcm",
+      "598d6130-a072-448d-909a-3520d7a73f19.dcm",
+      "834ac0bd-7896-416c-acd1-1780b769c36a.dcm",
+      "adaf3288-697a-439b-bb6e-f9a6ab9b6598.dcm",
+      "bead14e5-c130-4053-912b-24adac5e15a0.dcm"
+    ]
+  },
+  "rna": {
+    "source": "GDC",
+    "workflow": "STAR - Counts",
+    "file_id": "cbdb3ec7-c304-42c4-92ed-71adce5a0af1",
+    "file_name": "07234abb-aa8c-434f-898c-6f7ba28c5850.rna_seq.augmented_star_gene_counts.tsv",
+    "sample_barcode": "TCGA-WS-AB45-01A",
+    "md5": "bf2643b58f3ac33aa9cec0bbfc054228",
+    "size": 4236582,
+    "path": "rna/TCGA-COAD/TCGA-WS-AB45/cbdb3ec7-c304-42c4-92ed-71adce5a0af1_07234abb-aa8c-434f-898c-6f7ba28c5850.rna_seq.augmented_star_gene_counts.tsv"
+  },
+  "clinical": "metadata/clinical.csv (patient_id)"
+}

pairs/TCGA-COAD/0a6e4cfc2ad4b8656a9fdd34.json

@@ -0,0 +1,33 @@
+{
+  "pair_id": "0a6e4cfc2ad4b8656a9fdd34",
+  "project": "TCGA-COAD",
+  "patient_id": "TCGA-T9-A92H",
+  "match_level": "same_patient_sample_type",
+  "slide": {
+    "source": "IDC",
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pairs/TCGA-COAD/198bd232a266290799b3bd86.json

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pairs/TCGA-COAD/2c8c2ed2615fbc76bbe5728c.json

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pairs/TCGA-COAD/debcdb066ed3567cf243599d.json

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pairs/TCGA-COAD/df39a01c953e54ab6df39476.json

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pairs/TCGA-COAD/e1f108daf5c53bd61be7410d.json

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pairs/TCGA-COAD/f5ce674d4381625a0fe1654f.json

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pairs/TCGA-GBM/2b68c0e915cbe9b8244275f8.json

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pairs/TCGA-GBM/5fb2befafb7641aef7f23044.json

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pairs/TCGA-GBM/6a503cf30410d843ef0db5b7.json

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pairs/TCGA-GBM/7498ae61af933bc07208da5d.json

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