Download data_preprocessing/process_blue_screen_dataset.py from Gbone3176/orena-seg: direct link, hf CLI and curl.
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https://huggingface.co/datasets/Gbone3176/orena-seg/resolve/main/data_preprocessing/process_blue_screen_dataset.py
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hf download hf://datasets/Gbone3176/orena-seg/data_preprocessing/process_blue_screen_dataset.py
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curl -L -o process_blue_screen_dataset.py https://huggingface.co/datasets/Gbone3176/orena-seg/resolve/main/data_preprocessing/process_blue_screen_dataset.py
13.8 kB
| #!/usr/bin/env python3 | |
| """Coarse-to-fine frozen blue-screen detection for endoscopy videos. | |
| Stage 1 decodes each video sequentially and hashes one circular-ROI frame per | |
| second. Stage 2 re-reads only candidate windows and locates exact repeated-frame | |
| runs at native FPS. Inputs are read-only; all results go below --output-dir. | |
| """ | |
| from __future__ import annotations | |
| import argparse | |
| import csv | |
| import hashlib | |
| import json | |
| import socket | |
| import time | |
| from datetime import datetime, timezone | |
| from pathlib import Path | |
| import cv2 | |
| import numpy as np | |
| VIDEO_SUFFIXES = {".avi", ".mp4", ".mov", ".mkv"} | |
| def utc_now() -> str: | |
| return datetime.now(timezone.utc).astimezone().isoformat() | |
| def hhmmss(seconds: float) -> str: | |
| ms = int(round(seconds * 1000)) | |
| hours, rem = divmod(ms, 3_600_000) | |
| minutes, rem = divmod(rem, 60_000) | |
| secs, millis = divmod(rem, 1000) | |
| return f"{hours:02d}:{minutes:02d}:{secs:02d}.{millis:03d}" | |
| def roi_mask(height: int, width: int) -> np.ndarray: | |
| yy, xx = np.ogrid[:height, :width] | |
| return (((xx - width / 2) / (width * 0.47)) ** 2 + | |
| ((yy - height / 2) / (height * 0.47)) ** 2 <= 1) | |
| def frame_features(frame: np.ndarray, mask: np.ndarray, size: int) -> tuple[str, float]: | |
| small = cv2.resize(frame, (size, size), interpolation=cv2.INTER_AREA) | |
| small_mask = cv2.resize(mask.astype(np.uint8), (size, size), | |
| interpolation=cv2.INTER_NEAREST).astype(bool) | |
| pixels = small[small_mask] | |
| digest = hashlib.md5(pixels.tobytes()).hexdigest() | |
| hsv = cv2.cvtColor(small, cv2.COLOR_BGR2HSV) | |
| h, s, v = hsv[..., 0], hsv[..., 1], hsv[..., 2] | |
| valid = small_mask & (v > 18) | |
| if not valid.any(): | |
| return digest, 0.0 | |
| blue = valid & (h >= 88) & (h <= 140) & (s >= 55) & (v >= 35) | |
| return digest, float(blue.sum() / valid.sum()) | |
| def coarse_scan(video: Path, sample_seconds: float, min_static_seconds: float, | |
| blue_threshold: float, size: int) -> tuple[dict, list[dict]]: | |
| cap = cv2.VideoCapture(str(video)) | |
| if not cap.isOpened(): | |
| raise RuntimeError("cannot open video") | |
| fps = float(cap.get(cv2.CAP_PROP_FPS) or 0) | |
| frame_count = int(cap.get(cv2.CAP_PROP_FRAME_COUNT) or 0) | |
| width = int(cap.get(cv2.CAP_PROP_FRAME_WIDTH) or 0) | |
| height = int(cap.get(cv2.CAP_PROP_FRAME_HEIGHT) or 0) | |
| if fps <= 0 or frame_count <= 0 or width <= 0 or height <= 0: | |
| cap.release() | |
| raise RuntimeError(f"invalid metadata fps={fps} frames={frame_count} size={width}x{height}") | |
| mask = roi_mask(height, width) | |
| step = max(1, int(round(fps * sample_seconds))) | |
| samples: list[dict] = [] | |
| frame_idx = 0 | |
| next_sample = 0 | |
| while True: | |
| ok, frame = cap.read() | |
| if not ok: | |
| break | |
| if frame_idx >= next_sample: | |
| digest, ratio = frame_features(frame, mask, size) | |
| samples.append({"frame": frame_idx, "time": frame_idx / fps, | |
| "hash": digest, "blue_ratio": ratio}) | |
| next_sample += step | |
| frame_idx += 1 | |
| cap.release() | |
| if frame_idx < frame_count * 0.99: | |
| raise RuntimeError(f"early decode stop decoded={frame_idx} metadata_frames={frame_count}") | |
| min_samples = max(2, int(np.ceil(min_static_seconds / sample_seconds))) | |
| candidates: list[dict] = [] | |
| run_start = 0 | |
| for i in range(1, len(samples) + 1): | |
| if i == len(samples) or samples[i]["hash"] != samples[run_start]["hash"]: | |
| chunk = samples[run_start:i] | |
| mean_blue = float(np.mean([x["blue_ratio"] for x in chunk])) | |
| if len(chunk) >= min_samples and mean_blue >= blue_threshold: | |
| candidates.append({ | |
| "start_seconds": chunk[0]["time"], | |
| "end_seconds": chunk[-1]["time"] + sample_seconds, | |
| "sample_count": len(chunk), | |
| "mean_blue_ratio": mean_blue, | |
| "hash": chunk[0]["hash"], | |
| }) | |
| run_start = i | |
| metadata = {"fps": fps, "frame_count": frame_count, "width": width, | |
| "height": height, "duration_seconds": frame_count / fps, | |
| "decoded_frames": frame_idx, "coarse_samples": len(samples)} | |
| return metadata, candidates | |
| def refine_candidate(video: Path, metadata: dict, candidate: dict, pad_seconds: float, | |
| min_static_seconds: float, blue_threshold: float, | |
| size: int) -> list[dict]: | |
| fps = metadata["fps"] | |
| first = max(0, int(np.floor((candidate["start_seconds"] - pad_seconds) * fps))) | |
| last = min(metadata["frame_count"] - 1, | |
| int(np.ceil((candidate["end_seconds"] + pad_seconds) * fps))) | |
| cap = cv2.VideoCapture(str(video)) | |
| cap.set(cv2.CAP_PROP_POS_FRAMES, first) | |
| mask = roi_mask(metadata["height"], metadata["width"]) | |
| samples: list[dict] = [] | |
| frame_idx = first | |
| while frame_idx <= last: | |
| ok, frame = cap.read() | |
| if not ok: | |
| break | |
| digest, ratio = frame_features(frame, mask, size) | |
| samples.append({"frame": frame_idx, "hash": digest, "blue_ratio": ratio}) | |
| frame_idx += 1 | |
| cap.release() | |
| min_frames = max(2, int(np.ceil(min_static_seconds * fps))) | |
| runs: list[dict] = [] | |
| run_start = 0 | |
| for i in range(1, len(samples) + 1): | |
| if i == len(samples) or samples[i]["hash"] != samples[run_start]["hash"]: | |
| chunk = samples[run_start:i] | |
| mean_blue = float(np.mean([x["blue_ratio"] for x in chunk])) | |
| if len(chunk) >= min_frames and mean_blue >= blue_threshold: | |
| start_frame = chunk[0]["frame"] | |
| end_frame = chunk[-1]["frame"] | |
| runs.append({ | |
| "start_frame": start_frame, | |
| "end_frame": end_frame, | |
| "start_seconds": start_frame / fps, | |
| "end_seconds": (end_frame + 1) / fps, | |
| "duration_seconds": len(chunk) / fps, | |
| "start_time": hhmmss(start_frame / fps), | |
| "end_time": hhmmss((end_frame + 1) / fps), | |
| "frame_count": len(chunk), | |
| "mean_blue_ratio": mean_blue, | |
| "exact_repeated_hash": chunk[0]["hash"], | |
| "confidence": "high", | |
| }) | |
| run_start = i | |
| return runs | |
| def merge_duplicate_runs(runs: list[dict]) -> list[dict]: | |
| by_key: dict[tuple[int, int], dict] = {} | |
| for run in runs: | |
| by_key[(run["start_frame"], run["end_frame"])] = run | |
| return sorted(by_key.values(), key=lambda x: x["start_frame"]) | |
| def save_evidence(video: Path, intervals: list[dict], output_dir: Path, fps: float) -> None: | |
| if not intervals: | |
| return | |
| output_dir.mkdir(parents=True, exist_ok=True) | |
| cap = cv2.VideoCapture(str(video)) | |
| for index, interval in enumerate(intervals, 1): | |
| points = { | |
| "before": max(0, interval["start_frame"] - 1), | |
| "start": interval["start_frame"], | |
| "end": interval["end_frame"], | |
| "after": interval["end_frame"] + 1, | |
| } | |
| evidence = {} | |
| for label, frame_idx in points.items(): | |
| cap.set(cv2.CAP_PROP_POS_FRAMES, frame_idx) | |
| ok, frame = cap.read() | |
| if ok: | |
| name = f"interval_{index:03d}_{label}_f{frame_idx}.jpg" | |
| cv2.imwrite(str(output_dir / name), frame) | |
| evidence[label] = str((output_dir / name).name) | |
| interval["evidence_frames"] = evidence | |
| cap.release() | |
| def write_aggregate(output_dir: Path, records: list[dict], started_at: str, | |
| elapsed: float, input_dir: Path, config: dict) -> None: | |
| intervals = [] | |
| for record in records: | |
| for idx, interval in enumerate(record.get("intervals", []), 1): | |
| intervals.append({"video_id": record["video_id"], | |
| "video_path": record["video_path"], | |
| "interval_index": idx, **interval}) | |
| fields = ["video_id", "video_path", "interval_index", "start_frame", "end_frame", | |
| "start_seconds", "end_seconds", "duration_seconds", "start_time", "end_time", | |
| "frame_count", "mean_blue_ratio", "confidence", "exact_repeated_hash"] | |
| with (output_dir / "intervals.csv").open("w", newline="", encoding="utf-8") as handle: | |
| writer = csv.DictWriter(handle, fieldnames=fields, extrasaction="ignore") | |
| writer.writeheader(); writer.writerows(intervals) | |
| with (output_dir / "videos.jsonl").open("w", encoding="utf-8") as handle: | |
| for record in records: | |
| handle.write(json.dumps(record, ensure_ascii=False) + "\n") | |
| summary = { | |
| "status": "completed" if all(r["status"] == "completed" for r in records) else "failed", | |
| "started_at": started_at, "finished_at": utc_now(), "elapsed_seconds": elapsed, | |
| "host": socket.gethostname(), "input_dir": str(input_dir), "config": config, | |
| "video_count": len(records), | |
| "completed_video_count": sum(r["status"] == "completed" for r in records), | |
| "failed_video_count": sum(r["status"] == "failed" for r in records), | |
| "videos_with_blue_screen": sum(bool(r.get("intervals")) for r in records), | |
| "interval_count": len(intervals), | |
| "total_video_seconds": sum(r.get("duration_seconds", 0) for r in records), | |
| "total_blue_screen_seconds": sum(x["duration_seconds"] for x in intervals), | |
| } | |
| (output_dir / "summary.json").write_text(json.dumps(summary, ensure_ascii=False, indent=2), encoding="utf-8") | |
| def main() -> None: | |
| parser = argparse.ArgumentParser() | |
| parser.add_argument("--input-dir", type=Path, required=True) | |
| parser.add_argument("--output-dir", type=Path, required=True) | |
| parser.add_argument("--sample-seconds", type=float, default=1.0) | |
| parser.add_argument("--min-static-seconds", type=float, default=6.0) | |
| parser.add_argument("--blue-ratio", type=float, default=0.45) | |
| parser.add_argument("--pad-seconds", type=float, default=5.0) | |
| parser.add_argument("--coarse-size", type=int, default=96) | |
| parser.add_argument("--fine-size", type=int, default=160) | |
| parser.add_argument("--resume", action="store_true") | |
| args = parser.parse_args() | |
| videos = sorted(p for p in args.input_dir.rglob("*") if p.suffix.lower() in VIDEO_SUFFIXES) | |
| if not videos: | |
| raise SystemExit("no videos found") | |
| args.output_dir.mkdir(parents=True, exist_ok=True) | |
| per_video_dir = args.output_dir / "per_video" | |
| evidence_root = args.output_dir / "evidence" | |
| per_video_dir.mkdir(exist_ok=True) | |
| started_at = utc_now(); t0 = time.perf_counter() | |
| config = {"sample_seconds": args.sample_seconds, | |
| "min_static_seconds": args.min_static_seconds, | |
| "blue_ratio": args.blue_ratio, "pad_seconds": args.pad_seconds, | |
| "coarse_size": args.coarse_size, "fine_size": args.fine_size, | |
| "definition": "exact repeated decoded ROI frames with blue ratio above threshold"} | |
| records = [] | |
| for number, video in enumerate(videos, 1): | |
| video_id = video.stem.split(" ", 1)[0] | |
| result_path = per_video_dir / f"{video_id}.json" | |
| if args.resume and result_path.exists(): | |
| records.append(json.loads(result_path.read_text(encoding="utf-8"))) | |
| print(f"[{number}/{len(videos)}] resume {video.name}", flush=True) | |
| continue | |
| print(f"[{number}/{len(videos)}] start {video.name} {utc_now()}", flush=True) | |
| item_t0 = time.perf_counter() | |
| record = {"video_id": video_id, "video_path": str(video), "status": "failed", | |
| "started_at": utc_now(), "intervals": []} | |
| try: | |
| metadata, candidates = coarse_scan(video, args.sample_seconds, | |
| args.min_static_seconds, | |
| args.blue_ratio, args.coarse_size) | |
| fine_runs = [] | |
| for candidate in candidates: | |
| fine_runs.extend(refine_candidate(video, metadata, candidate, | |
| args.pad_seconds, | |
| args.min_static_seconds, | |
| args.blue_ratio, args.fine_size)) | |
| fine_runs = merge_duplicate_runs(fine_runs) | |
| save_evidence(video, fine_runs, evidence_root / video_id, metadata["fps"]) | |
| blue_seconds = sum(x["duration_seconds"] for x in fine_runs) | |
| record.update(metadata) | |
| record.update({"status": "completed", "coarse_candidate_count": len(candidates), | |
| "interval_count": len(fine_runs), "blue_screen": bool(fine_runs), | |
| "blue_screen_seconds": blue_seconds, | |
| "blue_screen_ratio": blue_seconds / metadata["duration_seconds"], | |
| "intervals": fine_runs}) | |
| except Exception as exc: | |
| record["error"] = f"{type(exc).__name__}: {exc}" | |
| record["finished_at"] = utc_now() | |
| record["elapsed_seconds"] = time.perf_counter() - item_t0 | |
| result_path.write_text(json.dumps(record, ensure_ascii=False, indent=2), encoding="utf-8") | |
| records.append(record) | |
| write_aggregate(args.output_dir, records, started_at, | |
| time.perf_counter() - t0, args.input_dir, config) | |
| print(f"[{number}/{len(videos)}] {record['status']} intervals={len(record['intervals'])} elapsed={record['elapsed_seconds']:.1f}s", flush=True) | |
| write_aggregate(args.output_dir, records, started_at, | |
| time.perf_counter() - t0, args.input_dir, config) | |
| if any(r["status"] != "completed" for r in records): | |
| raise SystemExit(2) | |
| if __name__ == "__main__": | |
| main() | |