Accession stringlengths 8 11 | Organism_Name stringlengths 10 53 | Submitters stringlengths 4 2.42k ⌀ | Organization stringlengths 3 234 ⌀ | Org_location stringlengths 3 24 ⌀ | Release_Date stringlengths 10 10 | Isolate stringlengths 1 75 ⌀ | Species stringlengths 10 53 ⌀ | Genus stringlengths 7 22 ⌀ | Family stringlengths 10 19 ⌀ | Molecule_type stringclasses 14
values | Length int64 5k 95.4k | Sequence_Type stringclasses 2
values | Publications float64 1 134 ⌀ | Geo_Location stringlengths 3 88 ⌀ | Country stringlengths 3 32 ⌀ | Host stringlengths 3 64 ⌀ | Isolation_Source stringlengths 3 31 ⌀ | Collection_Date stringlengths 4 10 ⌀ | BioSample stringlengths 12 14 ⌀ | BioProject stringlengths 9 23 ⌀ | GenBank_Title stringlengths 22 320 | Sequence stringlengths 5k 95.4k | __index_level_0__ int64 39 112k |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
MK460230.1 | Porcine astrovirus 2 | Lv,S.L., Zhang,H.H., Li,J.Y., Hu,W.Q., Song,Y.T., Opriessnig,T., Xiao,C.T., Lv,S.-L. | Hunan University, College of Biology | China | 2019-08-12 | PoAstV2/CHN/WG-R2/2017 | Porcine astrovirus 2 | Mamastrovirus | Astroviridae | ssRNA(+) | 6,422 | GenBank | 1 | China | China | Sus scrofa | feces | 2017-11 | null | null | Porcine astrovirus 2 isolate PoAstV2/CHN/WG-R2/2017, complete genome | CCAAATGTTTGTGTTGGTGCCGCTGGCCCATACCTGGACTGTGAGCCATGTCACTCTACCTTAACCGTGCCGATGAGGCACTGGCAACCCAAGACAGCACCCAGCTCAAACCACGGTTTGATGCTCGGGAATGGTTCGACGAGTTGCGTGCAATTGGACCCAACCTTCCGTGGTATATCACCTACCAACCGCGGATGTTGTTCTTCCCGACTCTTCGACCAGACCGAGTTTTGACCGCGAGTACTGTCTGTGAGGGAGAATGGCGAACCTTCCACCTGGACATCTGTGGTGGGAAGCATGTGGCTGTCGAGGTCAACCAT... | 60,325 |
MG930777.1 | Porcine astrovirus 2 | Tassoni,L., Zamperin,G., Schiavon,E., Vendramin,V., Cavicchio,L., Mion,M., Tonon,F., Monne,I., Beato,M.S. | Istituto Zooprofilattico Sperimentale delle Venezie, Diagnostic Virology Laboratory | null | 2018-12-02 | null | Porcine astrovirus 2 | Mamastrovirus | Astroviridae | ssRNA(+) | 6,396 | GenBank | null | Italy | Italy | Sus scrofa | feces | 2015-11 | null | null | Porcine astrovirus 2 strain DIAPD5469-10, complete genome | GTCCAAATGTTGGTGGTGGTGCCGCTGGCCCACATACTGGTTGGAGAAAGCATGTCTCTTTTCCTGAACCGTGCCGATGAGGCACTGGCATCTAATGACAGCACCCAGCTTAAAGCCCGGTTTGACGCACGGAAATGGTTTGATGAACTGCGTAGGATTGGACCAAATAAACCTTGGTATATAACCTACCAACCTCGCATGTTCTTTTATCCAACTCTCAAGCTTGACCGTGTGTTGACCGCGAGTACCGTCTGTGAGGAGGAATGGCGCACGTTTGTGTTGGACATGTGTTGTGGTGTCTATACTGCTATCGAAGTCAA... | 66,478 |
KP982872.1 | Porcine astrovirus 2 | Theuns,S., Conceicao-Neto,N., Heylen,E., Zeller,M., Roukaerts,I.D.M., Desmarets,L.M.B., Van Ranst,M., Nauwynck,H.J., Matthijnssens,J. | Ghent University, Virology, Parasitology and Immunology | Belgium | 2016-03-31 | Bel-12R021 | Porcine astrovirus 2 | Mamastrovirus | Astroviridae | ssRNA(+) | 6,368 | GenBank | null | Belgium | Belgium | Sus scrofa | null | null | null | null | Porcine astrovirus 2 isolate Bel-12R021, complete genome | AATGTTGGTGTTGGTGCCGCTGGCCCATGCCTGGAACAGCAAACATGTCTCTCTACCTTAACCGTGCCGATGAGGCACTGGCACAACAGGACGGAACCCAGCTCAAGCCCCGGTTTGATGCGCGGCCTTGGTTTGATGAGTTACGTAAGATCGGAGGCAACAAACCCTGGTATATCACCTACCAACCTCGGATGTTGTTCTTCCCGACTCTCAGACCTGACCGTATCCTTACCGCGAGCACCGTTACCGAAGGGGAATGGCGTACTTTCATCTTGGATAGGTGTTGTGGTGACTTCATAGCTGTTGAAGTTAACCATATC... | 83,130 |
KJ495986.1 | Porcine astrovirus 2 | Firth,C., Hesse,R.A., Lee,D., Ng,J., Quan,P.-L., Reddy,S.K., Madson,D.M., Arruda,P.H.E., Henry,S., DeMint,J., Neumann,E., Hardham,J.M., Lipkin,W.I. | Columbia University, Center for Infection and Immunity | USA | 2016-02-11 | null | Porcine astrovirus 2 | Mamastrovirus | Astroviridae | ssRNA(+) | 6,301 | GenBank | null | USA | USA | Sus scrofa | brain | 2012 | null | null | Porcine astrovirus 2 clone ExpPig-36, complete genome | GGCCCATACCTGGCTAGAGAAGAAAATGTCTCTTTACTTAAACCGTGCCGATGAGGCACTGGCAACATCTGACGGAACACAGCTCAAACCCCGGTTTGATGCTCGGAACTGGTTTGATGAACTGCGTAGGATTGGCCCAAATCTACCCTGGTACATAACCTACCAACCACGCATGTTGTTCTATCCAACTCTCAAGCCTGACCGAGTTCTGACCGCGAGTACTGTCTGCGAGGGTGAATGGCGAACCTTTGTCTTGGATATGTGCTGTGGCATTCATGTTGCCACTGAGGTCAACCACATACCGGACCACCAACCCACCA... | 83,819 |
KP759770.1 | Porcine astrovirus 2 | Lee,S., Jang,G., Lee,C. | Kyungpook National University, Department of Microbiology, College of Natural Sciences | South Korea | 2015-07-22 | KNU14-07 | Porcine astrovirus 2 | Mamastrovirus | Astroviridae | ssRNA(+) | 6,338 | GenBank | null | South Korea | South Korea | Sus scrofa | feces | 2014-07 | null | null | Porcine astrovirus 2 isolate KNU14-07, complete genome | CCAAATGTTGGTGTTGGTGCCGCTGGCCCATGCCTGAAGCAGCAAGCATGTCTCTCTACATTAACCGTGCCGATGAGGCACTGGCACAAACGGACGGTACCCAGCTCAAGCCCCGGTTTGATGCGCGGCCTTGGTTCGATGAGTTACGTAAGATCGGAGGCAACAAACCTTGGTATATCACCTACCAACCGAGGATGTTGTTCTTCCCAACTCTTAGGCCTGACCGAATTCTTACCGCGAGCACAGTCACCGAAGGGGAGTGGCGCACTTTCATCTTGGATAGGTGTTGTGGCGAACCTGTGGCTACTGAAGTTAACCAT... | 86,600 |
JX556690.1 | Porcine astrovirus 2 | Xiao,C.T., Gimenez-Lirola,L.G., Gerber,P.F., Jiang,Y.H., Halbur,P.G., Opriessnig,T. | Department of Veterinary Diagnostic and Production Animal Medicine, College of Veterinary Medicine | USA | 2013-02-15 | AstV2-US-IA122 | Porcine astrovirus 2 | Mamastrovirus | Astroviridae | ssRNA(+) | 6,334 | GenBank | 1 | USA | USA | Sus scrofa | feces | 2011-06-23 | null | null | Porcine astrovirus 2 isolate AstV2-US-IA122, complete genome | CCAAATGTTGGTGTTGGTGCCGCTGGCCCATGCCTGGAACAGCAAGCATGTCTCTCTATGTCAACCGTGCCGATGAGGCACTGGCACAAATGGACGGTACCCAGCTCAAGTCCCGGTTTGATGCACGGCCTTGGTTCGATGAGTTACGTAAGATCGGAGGTAACAAGCCTTGGTATATTACCTACCAGCCAAGAATGCTGTTCTTCCCAACTCTCAAGCCTGACCGGATTCTTACCGCGAGCACTGTCACCGAAGGAGAATGGCGCACGTTTGTGATGGATAGATGCTGTGGCGAACCAATCGTTATCGAGGTTAACCAC... | 95,238 |
JF713710.1 | Porcine astrovirus 2 | Shan,T., Li,L., Simmonds,P., Wang,C., Moeser,A., Delwart,E. | University of California-San Francisco, Blood Systems Research Institute, Department of Laboratory Medicine | USA | 2011-11-02 | null | Porcine astrovirus 2 | Mamastrovirus | Astroviridae | ssRNA(+) | 6,318 | GenBank | 1 | USA | USA | Sus scrofa | feces | 2010 | null | null | Porcine astrovirus 2 strain 43/USA, complete genome | GTGGTGGTGCCGCTGGCCCATACCTGGCTGGAGAAGAAAATGTCTCTATACCTAAACCGTGCCGATGAGGCACTGGCAACATTTGACGGAACACAGCTCAAACCCCGGTTTGATGCTCGGAACTGGTTTGACGAACTGCGTAGGATTGGCCCAAATCTACCCTGGTACATAACCTACCAACCACGCATGATGTTCTTTCCAACTCTCAAACCTGACCGAGTTCTGACCGCGAGTACCGTATGTGAGGGTGAGTGGCGAACTTTTGTCCTGGATATGTGCTGTGGCGTCCATGTCGCCACTGAGGTCAACCACATACCAGA... | 97,930 |
JF713712.1 | Porcine astrovirus 2 | Shan,T., Li,L., Simmonds,P., Wang,C., Moeser,A., Delwart,E. | University of California-San Francisco, Blood Systems Research Institute, Department of Laboratory Medicine | USA | 2011-11-02 | null | Porcine astrovirus 2 | Mamastrovirus | Astroviridae | ssRNA(+) | 6,358 | GenBank | 1 | USA | USA | Sus scrofa | feces | 2010 | null | null | Porcine astrovirus 2 strain 51/USA, complete genome | TGGTGCCGCTGGCCCATACCTGGCTGGAGAAGAAAATGTCTCTGTACCTAAACCGTGCCGATGAGGCACTGGCAACATCTGACGGAACACAGCTCAAACCCCGGTTTGATGCTCGGAACTGGTTTGACGAACTGCGTAGGATTGGCCCAAATCTACCCTGGTACATAACCTACCAACCACGCATGATGTTCTTTCCAACTCTCAAACCTGACCGAGTTCTGACCGCGAGTACCGTATGTGAGGGTGAGTGGCGAACTTTTGTCTTGGATATGTGCTGTGGCGTCCATGTCGCCACTGAGGTCAACCACATACCAGACCAC... | 97,932 |
NC_019494.1 | Porcine astrovirus 3 | Xiao,C.T., Gimenez-Lirola,L.G., Gerber,P.F., Jiang,Y.H., Halbur,P.G., Opriessnig,T. | National Center for Biotechnology Information, NIH | USA | 2012-11-21 | US-MO123 | Porcine astrovirus 3 | Mamastrovirus | Astroviridae | ssRNA(+) | 6,460 | RefSeq | 2 | USA | USA | Sus scrofa | feces | 2011-06-24 | null | PRJNA485481 | Porcine astrovirus 3 isolate US-MO123, complete genome | CCAAATAGAGCTGCCCGTTGGTCCGGCCCTATGGCGTTGCCTTTTGACGACACTCTTAGGTTTGGTTCAGCCGCGGCCCGTGTGAAAGGCCGTAGGCTAGATTCGGTTGCACGTACTAAGCTAAAGGATTTGCTTGGTAATGGACCTTATTTCTACGATTTTGGTCCTTTAGAAGTCGTTGACTCTTCATCAAAGCAGTTGACTGTGAAAATGACTTCTGTGCAAACCGTCTATGTGTCGTCGGTTGTTGAGGACAACTCTTATGTTACCTATAAGTTTGTGCCTGGCGTCAATGAATGGGTTGAAACAGAGCCTGTTCT... | 7,127 |
ON715001.1 | Porcine astrovirus 3 | Carvajal,A., Arguello,H., Cortey,M., Diaz,I., Gomez-Garcia,M., Puente,H. | Facultad de Veterinaria, Sanidad Animal | Spain | 2022-10-02 | SP-VC29 | Porcine astrovirus 3 | Mamastrovirus | Astroviridae | ssRNA(+) | 6,460 | GenBank | null | Spain | Spain | Sus scrofa | feces | 2017-08-04 | null | null | Porcine astrovirus 3 isolate SP-VC29, complete genome | CCAAATAGAGCTGCCCGTTGGTCCGGCCCTATGGCGTTGCCTTTTGACGACACTCTTAAATTTGGTTCAGCCACGGCCCGAACGAAAGGCCGTAGGCTGGATTCGGTTGCACGCACCAAGCTTAAGGATTTGCTTGGTGATGGTCCTTACTACTATGATTTTGGCCCTCTAGAAGTTGTCGACTCCTCTTCAAAGCAGTTGACCGTAAAAATGGCCTCTGTGCAAACCGTCTATGTGTCGTCGGTTGTTGAGGACAATTCTTATGTCACCTATAAGTTTGTGCCTGGCGTTAATGATTGGGTTGAGACAGAACCTGTTCT... | 23,866 |
MT394895.1 | Porcine astrovirus 3 | Matias Ferreyra,F.S., Bradner,L.K., Arruda,P.E.H., Harmon,K.M., Arruda,B.L. | Iowa State University, Department of Veterinary Diagnostic & Production Animal Medicine | USA | 2021-06-19 | null | Porcine astrovirus 3 | Mamastrovirus | Astroviridae | ssRNA(+) | 6,434 | GenBank | null | USA | USA | Sus scrofa domesticus | spinal cord | 2018-07-06 | null | null | UNVERIFIED: Porcine astrovirus 3 strain USA/IA/48142/2018, complete genome | CCAAATAGAGCTGCCCGTTGGTCCGGCCCTATGGCGTTGCCTTTTGACGACACTCTTAGGTTTGGTTCAGCCGCGGCCCGTGTGAAAGGCCGTAGGTTAGATTCGGTTGCACGCACCAAGCTGAAGGACTTGCTTGGTGATGGACCTTATTTCTATGATTTTGGTCCTTTAGAAGTCGTTGACTCCTCATCAAAGCAGTTGACTGTGAAAATGACTTCTGTGCAAACCGTCTATGTGTCGTCGGTTGTTGAGGACAATTCTTATGTTACCTATAAGTTTGTGCCTGGCGTTAATGAATGGGTTGAAACAGAGCCTGTTCT... | 41,179 |
MT394896.1 | Porcine astrovirus 3 | Matias Ferreyra,F.S., Bradner,L.K., Arruda,P.E.H., Harmon,K.M., Arruda,B.L. | Iowa State University, Department of Veterinary Diagnostic & Production Animal Medicine | USA | 2021-06-19 | null | Porcine astrovirus 3 | Mamastrovirus | Astroviridae | ssRNA(+) | 6,434 | GenBank | null | USA | USA | Sus scrofa domesticus | spinal cord | 2018-07-26 | null | null | UNVERIFIED: Porcine astrovirus 3 strain USA/IA/53214/2018, complete genome | CCAAATAGAGCTGCCCGTTGGTCCGGCCCTATGGCGTTGCCTTTTGACGACACTCTTAGGTTTGGTTCAGCCGCGGCCCGTGTGAAAGGCCGTAGGTTAGATTCGGTTGCACGCACCAAGCTGAAGGACTTGCTTGGTGATGGACCTTATTTCTATGATTTTGGTCCTTTAGAAGTCGTTGACTCCTCATCAAAGCAGTTGACTGTGAAAATGACTTCTGTGCAAACCGTCTATGTGTCGTCGGTTGTTGAGGACAATTCTTATGTTACCTATAAGTTTGTGCCTGGCGTTAATGAATGGGTTGAAACAGAGCCTGTTCT... | 41,180 |
KY940545.1 | Porcine astrovirus 3 | Arruda,B., Arruda,P., Hensch,M., Chen,Q., Zheng,Y., Yang,C., Gatto,I.R.H., Ferreyra,F.M., Gauger,P., Schwartz,K., Bradner,L., Harmon,K., Hause,B., Li,G. | Iowa State University, Veterinary Diagnostic and Production Animal Medicine, College of Veterinary Medicine | USA | 2017-12-03 | null | Porcine astrovirus 3 | Mamastrovirus | Astroviridae | ssRNA(+) | 6,461 | GenBank | 1 | USA | USA | Sus scrofa | null | 2017 | null | null | Porcine astrovirus 3 strain USA/IA/7023/2017, complete genome | CCAAATAGAGCTGCCCGTTGGTCCGGCCCTATGGCGTTGCCATTTGATGACACTCTTAAGTTTGGTTCAGCCACGGCTCGTACAAAGGGCCGTAGGCTAGACCTGGTTGCACGCACTAAGCTTAAAGACTTGCTTGGTGATGGTCCTTACTTCTATGACTTTGGTCCTTTAGAAGTTGTCGACTCTTCCTCAAAGCAGTTGACTGTGAAAATGACCTCCGTGCAAACCGTCTATGTGTCGTCGGTTGTTGAGGACAATTCTTATGTTACTTACAAGTTTGTGCCTGGCGTTAACGACTGGGTCGAGACAGACCCTGTTCT... | 73,566 |
KY073229.1 | Porcine astrovirus 3 | Boros,A., Albert,M., Pankovics,P., Biro,H., Pesavento,P.A., Phan,T.G., Delwart,E., Reuter,G. | ANTSZ, Baranya County Institute of State Public Health Service, Regional Laboratory of Virology | Hungary | 2017-11-15 | null | Porcine astrovirus 3 | Mamastrovirus | Astroviridae | ssRNA(+) | 6,393 | GenBank | null | Hungary | Hungary | Sus scrofa domesticus | brain | 2016 | null | null | Porcine astrovirus 3 strain NI-Brain/9-2016a/HUN, complete genome | CCAAATAGAGCTACCCGTTGGTCCGGCCCTATGGCGTTGCCATTCGACGACACTCTTAAATTTGGCTCAGCCACGGCCCGTATGAAGGGTCGTCGGTTGGACATGGTTGCACGCACCAAGTTAAAAGACTTACTTGGTGATGGTCCTTACTACTATGACTTTGGACCCCTGGAAGTTGTCGACTCTTCTTCTAAGCAGTCAACTGTTAAAATGACTTCCGTGCAAACTGTTTATGTGTCGTCGGTTGTTGAGGACAACTCCTACGTAACCTACAAGTTTGTGCCTGGCGTCAATGATTGGGTTGAAACTGAACCTGTTCT... | 73,744 |
KY073231.1 | Porcine astrovirus 3 | Boros,A., Albert,M., Pankovics,P., Biro,H., Pesavento,P.A., Phan,T.G., Delwart,E., Reuter,G. | ANTSZ, Baranya County Institute of State Public Health Service, Regional Laboratory of Virology | Hungary | 2017-11-15 | null | Porcine astrovirus 3 | Mamastrovirus | Astroviridae | ssRNA(+) | 6,393 | GenBank | null | Hungary | Hungary | Sus scrofa domesticus | brain | 2016 | null | null | Porcine astrovirus 3 strain NI-Brain/173-2016a/HUN, complete genome | CCAAATAGAGCTACCCGTTGGTCCGGCCCTATGGCGTTGCCATTCGACGACACTCTTAAATTTGGCTCAGCCACGGCCCGTATGAAGGGTCGTCGGTTGGACATGGTTGCACGCACCAAGTTAAAAGACTTACTTGGTGATGGTCCTTACTACTATGACTTTGGACCCCTGGAAGTTGTCGACTCTTCTTCTAAGCAGTCAACTGTTAAAATGACTTCCGTGCAAACTGTTTATGTGTCGTCGGTTGTTGAGGACAACTCCTACGTAACCTACAAGTTTGTGCCTGGCGTCAATGATTGGGTTGAAACTGAACCTGTTCT... | 73,745 |
KY073232.1 | Porcine astrovirus 3 | Boros,A., Albert,M., Pankovics,P., Biro,H., Pesavento,P.A., Phan,T.G., Delwart,E., Reuter,G. | ANTSZ, Baranya County Institute of State Public Health Service, Regional Laboratory of Virology | Hungary | 2017-11-15 | null | Porcine astrovirus 3 | Mamastrovirus | Astroviridae | ssRNA(+) | 6,394 | GenBank | null | Hungary | Hungary | Sus scrofa domesticus | brain | 2015 | null | null | Porcine astrovirus 3 strain NI-Brain/386-2015/HUN, complete genome | CCAAATAGAGCTACCCGTTGGTCCGGCCCTATGGCGTTGCCATTCGACGACACTCTTAAATTTGGCTCAGCCACGGCCCGTATGAAGGGTCGTCGGTTGGACATGGTTGCACGCACCAAGTTAAAAGACTTACTTGGTGATGGTCCTTACTACTATGACTTTGGACCCCTGGAAGTTGTCGACTCTTCTTCTAAGCAGTCAACTGTTAAAATGACTTCCGTGCAAACTGTTTATGTGTCGTCGGTTGTTGAGGACAACTCCTACGTAACCTACAAGTTTGTGCCTGGCGTCAATGATTGGGTTGAAACTGAACCTGTTCT... | 73,746 |
JX556691.1 | Porcine astrovirus 3 | Xiao,C.T., Halbur,P.G., Opriessnig,T., Gimenez-Lirola,L.G., Gerber,P.F., Jiang,Y.H. | Department of Veterinary Diagnostic and Production Animal Medicine, College of Veterinary Medicine | USA | 2012-11-14 | US-MO123 | Porcine astrovirus 3 | Mamastrovirus | Astroviridae | ssRNA(+) | 6,460 | GenBank | 2 | USA | USA | Sus scrofa | feces | 2011-06-24 | null | null | Porcine astrovirus 3 isolate US-MO123, complete genome | CCAAATAGAGCTGCCCGTTGGTCCGGCCCTATGGCGTTGCCTTTTGACGACACTCTTAGGTTTGGTTCAGCCGCGGCCCGTGTGAAAGGCCGTAGGCTAGATTCGGTTGCACGTACTAAGCTAAAGGATTTGCTTGGTAATGGACCTTATTTCTACGATTTTGGTCCTTTAGAAGTCGTTGACTCTTCATCAAAGCAGTTGACTGTGAAAATGACTTCTGTGCAAACCGTCTATGTGTCGTCGGTTGTTGAGGACAACTCTTATGTTACCTATAAGTTTGTGCCTGGCGTCAATGAATGGGTTGAAACAGAGCCTGTTCT... | 95,802 |
NC_023675.1 | Porcine astrovirus 4 | Shan,T., Li,L., Simmonds,P., Wang,C., Moeser,A., Delwart,E. | National Center for Biotechnology Information, NIH | USA | 2014-03-07 | null | Porcine astrovirus 4 | Mamastrovirus | Astroviridae | ssRNA(+) | 6,639 | RefSeq | 1 | USA | USA | Sus scrofa | feces | 2010 | null | PRJNA485481 | Porcine astrovirus 4 strain 35/USA, complete genome | GTAGGGGATTCACATCCAAGGTTGATTTAGCTGTCAACTCTGGCAACTATAACGCTAGGCTACAAGCCGGCGAAATGGTTGACCGGTTGAGGTGCTTGCCAGGGCACCGACCAAATTCCCCATGGGACATAAGAACAGTCCCAAGGCATATGATTTACCCAACACTCTCTATTGACCCACGAGATCGTGTTATTATAGCTTCATCTGTGACAACTGATAATGAATGGGTAACCTATGTTCTTGATGGGAATAGTTGGCAGCAAACCATTTGTGCCCAGGATGAACAGGTTGTTATTCTAGTATGCGCCCTTCTTAATGAT... | 6,624 |
ON792967.1 | Porcine astrovirus 4 | Carvajal,A., Arguello,H., Cortey,M., Diaz,I., Gomez-Garcia,M., Puente,H. | Facultad de Veterinaria, Sanidad Animal | Spain | 2022-10-02 | SP-VC29 | Porcine astrovirus 4 | Mamastrovirus | Astroviridae | ssRNA(+) | 6,513 | GenBank | null | Spain | Spain | Sus scrofa | feces | 2017-06-06 | null | null | Porcine astrovirus 4 isolate SP-VC29, complete genome | TGGCGATGGCCCACAAGGGATTTACATCCAAGGTTGATTTAGCTGTCAACTCTGGCAATTATCTTGCACGCCAACAAGCCGGCTGGATGGTTGACCGGTTGAGGTGCTTGCCAGGGCACCGTCCAAATTCCCCCTGGAGCATTAGGACCGTACCACGGTATGTGATCTACCCAACATTGAATTCTAACCCAAGAGACCGGGTTATAATTGCATCATCTGTAACTGAGGACAATGAGTGGGTGACCTATGTCCTTGATGGGGAAAGTTGGCAGCAAACCATTTGTGCTCCGGATGAACAGTCTGTCATTCTTGTGTGCGCC... | 23,867 |
ON792968.1 | Porcine astrovirus 4 | Carvajal,A., Arguello,H., Cortey,M., Diaz,I., Gomez-Garcia,M., Puente,H. | Facultad de Veterinaria, Sanidad Animal | Spain | 2022-10-02 | SP-VC41 | Porcine astrovirus 4 | Mamastrovirus | Astroviridae | ssRNA(+) | 6,513 | GenBank | null | Spain | Spain | Sus scrofa | feces | 2017-10-19 | null | null | Porcine astrovirus 4 isolate SP-VC41, complete genome | TGGCGATGGCCCACAAGGGATTTACATCCAAGGTTGATTTAGCTGTCAACTCTGGCAATTTTCTTGCCCGCCAACAGGCCGGCAGGATGGTTGACCGGTTGAGGTGCTTGCCAGGGCACCGTCCAAATTCCCCATGGAGCATTAGGACCGTACCACGGTTTGTGATCTACCCAACATTGAATTCTAACCCAAGAGACCGGGTTATAATTGCATCATCTGTAACTGAGGACAATGAGTGGGTGACTTATGTCCTTGACGGGGAAAGTTGGCAGCAAACCATTTGTGCTCCGGATGAACAGTCTGTCATTCTTGTGTGCGCC... | 23,868 |
ON792969.1 | Porcine astrovirus 4 | Carvajal,A., Arguello,H., Cortey,M., Diaz,I., Gomez-Garcia,M., Puente,H. | Facultad de Veterinaria, Sanidad Animal | Spain | 2022-10-02 | SP-VT9 | Porcine astrovirus 4 | Mamastrovirus | Astroviridae | ssRNA(+) | 6,513 | GenBank | null | Spain | Spain | Sus scrofa | feces | 2018-01-31 | null | null | Porcine astrovirus 4 isolate SP-VT9, complete genome | TGGCGATGGCCCACAAGGGATTTACATCCAAGGTTGATTTAGCTGTCAGCTCTGGCAATTTTCTTACCCGCCAACAGGCCGGCAGGATGGTTGACCGGTTGAGGTGCTTGCCAGGGCACCGTCCAAATTCCCCCTGGAGCATTAGGACCGTACCACGGTATGTGCTCTACCCAACTTTGAATTCTAACCCAAGAGACCGTGTGATCATAGCATCATCAGTAACTGAGGATAATGAGTGGGTGACCTATGTCCTTGACGGGGAAAGCTGGCAGCAAACCATTTGTGCTCCGGATGAACAGTCTGTCATTCTTGTGTGCGCC... | 23,869 |
ON792970.1 | Porcine astrovirus 4 | Carvajal,A., Arguello,H., Cortey,M., Diaz,I., Gomez-Garcia,M., Puente,H. | Facultad de Veterinaria, Sanidad Animal | Spain | 2022-10-02 | SP-VC9 | Porcine astrovirus 4 | Mamastrovirus | Astroviridae | ssRNA(+) | 6,513 | GenBank | null | Spain | Spain | Sus scrofa | feces | 2017-01-25 | null | null | Porcine astrovirus 4 isolate SP-VC9, complete genome | TGGCGATGGCCCGTAAGGGATATACATCCAAGGTTGATTTAGCTGTCAACTCTGGCAATTTTCTTACCCGCCAACAGGCCGGCAGAATGGTTGACCAGTTGAGGTGCTTGCCAGGGCACCGTCCAAATTCCCCCTGGAGCATTAAAACAGTTCCGCGGTATGTGCTCTACCCAACACTGAATTCTAACCCACGAGACCGTGTCATCATAGCATCATCTGTAACTAAAGAGAATGAATGGGTAACTTATGTCCTTGACGGGGAAAGCTGGCAGCAAACCATTTGTGCTCCGGATGAACAGTCTGTCATTCTTGTGTGCGCC... | 23,870 |
ON792971.1 | Porcine astrovirus 4 | Carvajal,A., Arguello,H., Cortey,M., Diaz,I., Gomez-Garcia,M., Puente,H. | Facultad de Veterinaria, Sanidad Animal | Spain | 2022-10-02 | SP-VC19 | Porcine astrovirus 4 | Mamastrovirus | Astroviridae | ssRNA(+) | 6,513 | GenBank | null | Spain | Spain | Sus scrofa | feces | 2017-03-07 | null | null | Porcine astrovirus 4 isolate SP-VC19, complete genome | TGGCGATGGCCCACAAGGGATTCACATCCAAGGTTGATTTAGCTGTCAGCTCCGGCAACTATCTAGCGCTCCAACAGGCCGGCAGAATGGTTGACCGGTTGAGGTGCTTGCCAGGGCACCGACCAAATTCCCCGTGGAGTATTAGGACCGTACCACGGTATATGATATACCCAACTTTGAATACTGATCCTAGAGACCGTGTGATCATTGCATCTTCAGTCACAGTGGAAAATGAATGGGTAACCTATGTCCTTGATGGGGATAGCTGGCGGCAAACCATTTGTGCTCCGGATGAACAGTCTGTCATTCTTGTGTGCGCC... | 23,871 |
ON792972.1 | Porcine astrovirus 4 | Carvajal,A., Arguello,H., Cortey,M., Diaz,I., Gomez-Garcia,M., Puente,H. | Facultad de Veterinaria, Sanidad Animal | Spain | 2022-10-02 | SP-VT41 | Porcine astrovirus 4 | Mamastrovirus | Astroviridae | ssRNA(+) | 6,513 | GenBank | null | Spain | Spain | Sus scrofa | feces | 2018-05-16 | null | null | Porcine astrovirus 4 isolate SP-VT41, complete genome | TGGCGATGGCCCGCAAGGGATTTACGTCCAAGGTTGATTTAGCTGTCAACTCTGGCAACTATCTTGCCGGCCAACAGGCCGGCACTATGGTTGACCAGTTGAGGTGCTTGCCAGGGCACCGACCAAATTCCCCCTGGAGCATTAAAACAATGCCGCGGCATATGATCTACCCAACACTGAATACTGATCCACGAGATCGTGTCATCATAGCTTCATCTGTGACAGTGGAGAACGAATGGGTGACTTATGTTCTTGACGGGGAAAGTTGGCAGCAAACCATTTGTGCTCAGGATGAACAGGCTGTTATTCTTGTGTGCGCC... | 23,872 |
MW962975.1 | Porcine astrovirus 4 | Xu,S. | Yunnan Agricultural University, College of Animal Medicine | China | 2021-06-22 | PAstV4 (YN01-2020) | Porcine astrovirus 4 | Mamastrovirus | Astroviridae | ssRNA(+) | 6,725 | GenBank | null | China | China | Sus scrofa | null | 2020 | null | null | Porcine astrovirus 4 isolate PAstV4 (YN01-2020), complete genome | CCTCTAGAGATTCCAAATTGACCGTTGGTGGCGATGGCCCGTAAGGGATTTACATCCAAGGTTGATTTAGCTGTCAGCTCTGGCAACTATAATGCCAGGCTTCAAGCCGGCAATATGGTTGACCAGTTGAGGTGCTTGCCAGGGCACCGACCAAGTTCTCCATGGGACATCAGGACCTTACCACGTTATATGATCTACCCAACCTTGTCCACTGACCCAAGAGATCGTGTAATTATAGCATCATCAGTTACAGATGACAATGAATGGGTTACTTATGTCCTTGATGGAGATAGCTGGCGGCAAACCATTTGTGCCCGGGA... | 41,147 |
MK613068.1 | Porcine astrovirus 4 | Chen,S., Zuo,Y., Fan,J., Yuan,G., Wang,J., Liu,R., Xing,Y. | Agricultural University of Hebei Province, College of Veterinary Medicine | China | 2019-09-25 | PAstV/CH/HB-SJZ/2018 | Porcine astrovirus 4 | Mamastrovirus | Astroviridae | ssRNA(+) | 6,733 | GenBank | null | China | China | Sus scrofa | null | 2018 | null | null | Porcine astrovirus 4 isolate PAstV/CH/HB-SJZ/2018, complete genome | TCCAAATTGACCGTTGGTGGCGATGGCCCGCAAGGGATTTACATCCAAGGTTGATTTAGCTGTCAGCTCTGGCAACTATAACGCCAGGCTTCAAGCCGGCAATATGGTTGACCAGTTGAGGTGCTTGCCAGGGCACCGACCAAATTCTCCATGGGACATTAGGACATTACCACGTCATATGGTCTACCCAACTCTGTCTACTGACCCAAGAGACCGTGTAATTATAGCATCATCAGTTACAGAAGAAAATGAGTGGGTTACCTATGTCCTTGATGGGGAAAGCTGGCGGCAAACCATTTGTGCTCCGGATGAACAGGTTG... | 59,412 |
MK460231.1 | Porcine astrovirus 4 | Lv,S.L., Zhang,H.H., Li,J.Y., Hu,W.Q., Song,Y.T., Opriessnig,T., Xiao,C.T., Lv,S.-L. | Hunan University, College of Biology | China | 2019-08-12 | PoAstV4/CHN/WG-R2/2017 | Porcine astrovirus 4 | Mamastrovirus | Astroviridae | ssRNA(+) | 6,649 | GenBank | 1 | China | China | Sus scrofa | feces | 2017-11 | null | null | Porcine astrovirus 4 isolate PoAstV4/CHN/WG-R2/2017, complete genome | CCAAATTGACCGTTGGTGGCGATGGCCCGCAAGGGATTCACATCCAAGGTTGATTTAGCTGTCAACTCCGGCAACTACAACGCCAGGCTACAAGCTGGCGAAATGGTTGACCGGTTGAGGTGCTTGCCAGGGCACCGACCAAATTCCCCTTGGGATATAAGAACAGTCCCGCGACATATGATTTACCCAACATTGTCTACTGACCCACGAGATCGTGTTATCATAGCTTCGTCTGTAACAACTGATAATGAATGGGTAACCTATGTCCTTGATGGGAATAGTTGGCAGCAAACCATTTGTGCTCCGGATGAACAGGCTGT... | 60,326 |
MH425243.1 | Porcine astrovirus 4 | Zhao,C. | Tianjin University the School of Life Sciences, Microbiology and Immunology Lab | China | 2018-12-11 | TJ060606 | Porcine astrovirus 4 | Mamastrovirus | Astroviridae | ssRNA(+) | 6,716 | GenBank | null | China | China | Sus scrofa | null | 2018 | null | null | Porcine astrovirus 4 strain Tianjin/2018, complete genome | ATGGCCCGCAAGGGATTTACATCCAAGGTTGATTTAGCTGTCAGCTCTGGCAACTACAACGCTAGGCTTCAAGCCGGCGGAATGGTTGACCAGTTGAGGTGCTTGCCAGGGCACCGACCAAATTCTCCATGGGACATTAGGACTTTACCACGTCATATGATCTACCCAACTCTGTCAACTGATCCACGAGACCGTGTAATTATTGCATCTTCAGTTACAGTGGAAAATGAATGGGTTACCTATGTCCTAGACGGGGATAGCTGGCGGCAAACCATTTGTGCTCCGGATGAACAGGCTGTCATTCTTGTGTGTGCCCTTCT... | 66,178 |
KX060808.1 | Porcine astrovirus 4 | Li,A., Huang,T., Song,D., Zhang,T., Peng,Q., Chen,Y., Zhou,X., Zhang,F., Tang,Y. | Jiangxi Agricultural University, College of Vet Medicine | China | 2016-12-12 | null | Porcine astrovirus 4 | Mamastrovirus | Astroviridae | ssRNA(+) | 6,644 | GenBank | null | China | China | Sus scrofa | feces | 2014-09 | null | null | Porcine astrovirus 4 strain JXJA, complete genome | TGGTGGCTATGGCCCGTAAGGGATTTACATCCAAGGTTGATTCAGCTGTCAACTCTGGCAACTACAACGCCAGGCTACAAGCCGGCGAGATGGTTGACCAGTTGAGGTGCTTGCCAGGGCACCGACCAAATTCCCCTTGGGACATAAGAACAGTTCCAAGACATATGATCTACCCAACACTCTCTACTGACCCACGAGATCGTGTCATCATAGCATCGTCTGTAACAACGGAGAATGAATGGGTAACTTATGTTCTTGATGGGAATAGTTGGCAGCAAACCATTTGTGCTCAGGATGAACAATCTGTCATTCTAGTGTGC... | 79,121 |
KX060809.1 | Porcine astrovirus 4 | Li,A., Huang,T., Song,D., Zhang,T., Peng,Q., Chen,Y., Zhou,X., Zhang,F., Tang,Y. | Jiangxi Agricultural University, College of Vet Medicine | China | 2016-12-12 | null | Porcine astrovirus 4 | Mamastrovirus | Astroviridae | ssRNA(+) | 6,669 | GenBank | null | China | China | Sus scrofa | feces | 2014-03 | null | null | Porcine astrovirus 4 strain CH/JXZS/2014, complete genome | TGGTGGCTATGGCCCGTAAGGGATTTACATCCAAGGTTGATTCAGCTGTCAACTCTGGCAACTACAACGCCAGGCTACAAGCCGGTGAGATGGTTGACCAGTTGAGGTGCTTGCCAGGGCACCGACCAAATTCCCCTTGGGACATAAGAACAGTTCCAAGACATATGATCTACCCAACACTCTCTACTGACCCACGAGATCGTGTCATCATAGCATCATCTGTAACAACAGAGAATGAATGGGTAACTTATGTTCTTGATGGGAATAGTTGGCAGCAAACCATTTGTGCTCAAGATGAACAACCTGTCATTCTAGTGTGC... | 79,122 |
KU764484.1 | Porcine astrovirus 4 | Padmanabhan,A., Hause,B.M., Hause,B. | KSU, Veterinary Diagnostic Lab | USA | 2016-06-29 | 15-13 | Porcine astrovirus 4 | Mamastrovirus | Astroviridae | ssRNA(+) | 6,562 | GenBank | 1 | USA: Oklahoma | USA | Sus scrofa | null | 2015-10-21 | null | null | Porcine astrovirus 4 isolate 15-13, complete genome | TGGCGTTAAAGTTGCCGGAGTTGACAGCTAAATCAACCTTGGATATCTGCAGAGCTCCGGCAACTTTAACGCCAGGCTACAAGCCGGCGAGATGGTTGACCGGTTGAGGTGCTTGCCAGGGCACCGATCAAATTCCCCTTGGGACATAAGAACAGTCCCACGGCATATGATTTACCCAACACTCTCTACCGATCCACGAGATCGTGTCATCATAGCTTCATCTGTTACAGTTGAGAATGAATGGGTAACTTATGTCCTTGATGGGAATAGTTGGCAGCAAACCATTTGTGCTCAGGATGAACAGGCTGTCATTCTTGTGT... | 81,503 |
KU764485.1 | Porcine astrovirus 4 | Padmanabhan,A., Hause,B.M., Hause,B. | KSU, Veterinary Diagnostic Lab | USA | 2016-06-29 | 15-14 | Porcine astrovirus 4 | Mamastrovirus | Astroviridae | ssRNA(+) | 6,562 | GenBank | 1 | USA: Oklahoma | USA | Sus scrofa | null | 2015-10-21 | null | null | Porcine astrovirus 4 isolate 15-14, complete genome | TGGCGTTAAAGTTGCCGGAGTTGACAGCTAAATCAACCTTGGATATCTGCAGAGCTCCGGCAACTTTAACGCCAGGCTACAAGCCGGCGAGATGGTTGACCGGTTGAGGTGCTTGCCAGGGCACCGATCAAATTCCCCTTGGGACATAAGAACAGTCCCACGGCATATGATTTACCCAACACTCTCTACCGATCCACGAGATCGTGTCATCATAGCTTCATCTGTTACAGTTGAGAATGAATGGGTAACTTATGTCCTTGATGGGAATAGTTGGCAGCAAACCATTTGTGCTCAGGATGAACAGGCTGTCATTCTTGTGT... | 81,504 |
KU764486.1 | Porcine astrovirus 4 | Padmanabhan,A., Hause,B.M., Hause,B. | KSU, Veterinary Diagnostic Lab | USA | 2016-06-29 | 15-12 | Porcine astrovirus 4 | Mamastrovirus | Astroviridae | ssRNA(+) | 6,565 | GenBank | 1 | USA: Oklahoma | USA | Sus scrofa | null | 2015-03-13 | null | null | Porcine astrovirus 4 isolate 15-12, complete genome | TGGCGTTAAAGTTGCCGGAGTTGACAGCTAAATCAACCTTGGATATCTGCAGAGCTCCGGCAACTTTAACGCCAGACTACAAGCCGGCGAGATGGTTGACCGGTTGAGGTGCTTGCCAGGGCACCGACCAAATTCCCCTTGGGACATAAGAACAGTCCCACGGCATATGATTTACCCAACACTCTCTACCGATCCACGAGATCGTGTCATCATAGCTTCATCTGTTACAATTGAGAATGAATGGGTAACTTATGTCCTTGATGGGAATAGTTGGCAGCAAACCATTTGTGCTCAGGATGAACAGGCTGTTATTCTTGTGT... | 81,505 |
JX556692.1 | Porcine astrovirus 4 | Xiao,C.T., Gimenez-Lirola,L.G., Gerber,P.F., Jiang,Y.H., Halbur,P.G., Opriessnig,T. | Department of Veterinary Diagnostic and Production Animal Medicine, College of Veterinary Medicine | USA | 2013-02-15 | AstV4-US-IL135 | Porcine astrovirus 4 | Mamastrovirus | Astroviridae | ssRNA(+) | 6,647 | GenBank | 1 | USA | USA | Sus scrofa | feces | 2011-06-27 | null | null | Porcine astrovirus 4 isolate AstV4-US-IL135, complete genome | CCAAATTGACCGTTGGTGGCGATGGCCCGCAAGGGATTTACATCCAAGGTTGATTTAGCTGTCAGCTCTGGCAACTATAATGCCAGGCTTCAAGCCGGCAACATGGTTGACCAGTTGAGGTGCATGCCAGGGCATCGATCAAATTCCCCGTGGGATATTAGAACTCTACCACGACATATGGTTTACCCAACTTTATCCACTGACCCACGAGATCGTGTGATCATAGCATCATCAGTTACAATGGATAATGAATGGGTGACCTATGTCCTTGATGGGGATAGCTGGCGGCAAACCATTTGTGCTCCGGATGAACAAGCTGT... | 95,239 |
JF713713.1 | Porcine astrovirus 4 | Shan,T., Li,L., Simmonds,P., Wang,C., Moeser,A., Delwart,E. | University of California-San Francisco, Blood Systems Research Institute, Department of Laboratory Medicine | USA | 2011-11-02 | null | Porcine astrovirus 4 | Mamastrovirus | Astroviridae | ssRNA(+) | 6,639 | GenBank | 1 | USA | USA | Sus scrofa | feces | 2010 | null | null | Porcine astrovirus 4 strain 35/USA, complete genome | GTAGGGGATTCACATCCAAGGTTGATTTAGCTGTCAACTCTGGCAACTATAACGCTAGGCTACAAGCCGGCGAAATGGTTGACCGGTTGAGGTGCTTGCCAGGGCACCGACCAAATTCCCCATGGGACATAAGAACAGTCCCAAGGCATATGATTTACCCAACACTCTCTATTGACCCACGAGATCGTGTTATTATAGCTTCATCTGTGACAACTGATAATGAATGGGTAACCTATGTTCTTGATGGGAATAGTTGGCAGCAAACCATTTGTGCCCAGGATGAACAGGTTGTTATTCTAGTATGCGCCCTTCTTAATGAT... | 97,933 |
NC_023636.1 | Porcine astrovirus 5 | Xiao,C.T., Gimenez-Lirola,L.G., Gerber,P.F., Jiang,Y.H., Halbur,P.G., Opriessnig,T. | National Center for Biotechnology Information, NIH | USA | 2014-03-06 | AstV5-US-IA122 | Porcine astrovirus 5 | null | Astroviridae | ssRNA(+) | 6,500 | RefSeq | 1 | USA | USA | Sus scrofa | feces | 2011-06-23 | null | PRJNA485481 | Porcine astrovirus 5 isolate AstV5-US-IA122, complete genome | CCAAAAGTGAGGTTGGCTGGCTCCGCTAGCTGTTGTTCGCTGATATAGTGATTTAATCCTCTTTATATCGTCCTGTCAATAGCTTCTTTGCTGTGACATTATGGACCAGCTCTTTCGTCGGGGTGATCCTTTCGCTAGGCGTTGGGTCGAGTCTAGGCCTGAGGTCTATAAGAGTATGCTCAAACTCTTCCCTGACAATGCAGTTGTCTTTATAACACGTGCGCGTCACAATAGGGATTTTGCCCCTGTGGCATCATCCGTCGACCATGACTCTGAGTGGGTTTCCTATAAGTACACTGGTACCACATGGGAACAAGTCG... | 6,626 |
OQ781001.1 | Porcine astrovirus 5 | Li,Z.H., Jin,J.H., Hu,H. | Henan Agricultural University, College of Veterinary Medicine | China | 2023-07-31 | PAstV5-HNPDS-01-P10 | Porcine astrovirus 5 | null | Astroviridae | ssRNA(+) | 6,419 | GenBank | null | China | China | Sus scrofa | feces | 2021 | null | null | Porcine astrovirus 5 isolate PAstV5-HNPDS-01-P10, complete genome | TTTCGTGGTGGAGGGTTTGGCTGGTTCGCCTGGCTCTAATCGCTATGGACAAAGTCTTCAGAAGGGGTGATCCCTTTGCCAGACGGTGGGTTGAAAGCCGTCCTGAGGTCTATAAATCTATGTTAGACCTGTTTCCTGAGAATGCTGTCATCATGATAACGCGCACCCGTTACAACTCAGCATTCGCACCTGTAGCTTCCTCTGTTGATGAAGACTCTGAGTGGGTGTCCTACGTTTTCACCGGTACTGACTGGGAACAAACGAAAGAAGTCGCGGTCGACTCACAGGCTGCGATCGTGACTGTGGCACTCTTAGAGAAT... | 14,499 |
ON792973.1 | Porcine astrovirus 5 | Carvajal,A., Arguello,H., Cortey,M., Diaz,I., Gomez-Garcia,M., Puente,H. | Facultad de Veterinaria, Sanidad Animal | Spain | 2022-09-26 | SP-VC9 | Porcine astrovirus 5 | null | Astroviridae | ssRNA(+) | 6,500 | GenBank | null | Spain | Spain | Sus scrofa | feces | 2017-01-25 | null | null | Porcine astrovirus 5 isolate SP-VC9, complete genome | CCAAAAGTGAGGTTGGCTGGCTCCGCTAGCTGTTGTTCGCTGATATAGTGATTTAATCCTCTTTACATTGTCCTGTTACTAGCTTCTCTGCTGTGACATTATGGACCAGCTCTTTCGTCGGGGTGATCCCTTCGCTAGGCGTTGGGTCGAGTCTAGACCTGATGTCTATAAGAGTATGCTCAAACTCTTCCCTGACAATGCAGTTGTCTTTATAACACGTGCACGTCATAATAGGGATTTTGCCCCTGTGGCATCATCCGTTGACCATGACTCTGAGTGGGTTTCCTACAAGTACACTGGTACCACGTGGGAACAAGTCG... | 24,227 |
ON792974.1 | Porcine astrovirus 5 | Carvajal,A., Arguello,H., Cortey,M., Diaz,I., Gomez-Garcia,M., Puente,H. | Facultad de Veterinaria, Sanidad Animal | Spain | 2022-09-26 | SP-VT9 | Porcine astrovirus 5 | null | Astroviridae | ssRNA(+) | 6,500 | GenBank | null | Spain | Spain | Sus scrofa | feces | 2018-01-31 | null | null | Porcine astrovirus 5 isolate SP-VT9, complete genome | CCAAAAGTGAGGTTGGCTGGCTCCGCTAGCTGTTGTTCGCTGATATAGTGATTTAATCCTCTTTATATTGTCCTGTTACTAGCTTCTCTGCTGTGACATTATGGACCAGCTCTTTCGTCGGGGTGATCCCTTCGCTAGGCGTTGGGTCGAGTCTAGACCTGATGTCTATAAGAGTATGCTCAAACTCTTCCCTGACAATGCAGTTGTCTTTATAACACGTGCGCGTCATAATAGGGATTTTGCCCCTGTGGCATCATCCGTTGACCATGACTCTGAGTGGGTTTCCTACAAGTACACTGGTACCACGTGGGAACAAGTCG... | 24,228 |
MZ819167.1 | Porcine astrovirus 5 | Flores,C., Ariyama,N., Bennett,B., Mena,J., Verdugo,C., Mor,S., Brito,B., Ramirez-Toloza,G., Neira,V., Bennet,B., Ramirez,G. | Universidad de Chile, The iThree Institute, Faculty of Science | Chile | 2022-01-08 | PoAstV5/Swine/CHI/CF2671/2017 | Porcine astrovirus 5 | null | Astroviridae | ssRNA(+) | 6,422 | GenBank | 1 | Chile | Chile | Sus scrofa | oronasopharynx | 2017 | null | null | Porcine astrovirus 5 isolate PoAstV5/Swine/CHI/CF2671/2017, complete genome | TGTTGTTCGCTGATATAGTGATTTAATTCCTCTACATTGTCCTGTTACTAGTTTTCTTGTGCTGTGACACCATGGACCAGCTCTTTCGTCGGGGTGATCCCTTTGCTAGGCGTTGGGTCGAGTCTAGGCCTGATGTCTACAAGAGTATGCTCAAGCTCTTCCCTGACAATGCAGTTGTCTTCATAACGCGTGCGCGTCATAATAGGGATTTTGCCCCTGTGGCATCATCTGTTGACCATGACTCTGAGTGGGTTTCCTATAAGTACACTGGTACTACATGGGAACAAGTCGACGAGGTTCCTGTCGATTCACAATCGGCA... | 33,784 |
MZ819168.1 | Porcine astrovirus 5 | Flores,C., Ariyama,N., Bennett,B., Mena,J., Verdugo,C., Mor,S., Brito,B., Ramirez-Toloza,G., Neira,V., Bennet,B., Ramirez,G. | Universidad de Chile, The iThree Institute, Faculty of Science | Chile | 2022-01-08 | PoAstV5/Swine/CHI/FB016/2017 | Porcine astrovirus 5 | null | Astroviridae | ssRNA(+) | 6,498 | GenBank | 1 | Chile | Chile | Sus scrofa | feces | 2017 | null | null | Porcine astrovirus 5 isolate PoAstV5/Swine/CHI/FB016/2017, complete genome | CGGAAGTGAGGTTGGCTGGCTCAGCTAGCTGTTGTTCGCTGATATAGTGACTTAATTCCTCCATATTGTCCTGTTACTAGCTTCATGTGCTGTGACACCATGGACCAGCTCTTTCGTCGGGGTGACCCCTTCGCTAGGCGTTGGGTTGAGTCTAGGCCTGATGTCTATAAGAGTATGCTCAAACTTTTCCCTGACAATGCAGTTGTCTTTATAACACGTGCGCGTCATAACAGGGATTTTGCCCCTGTGGCATCATCCGTTGACCATGACTCTGAGTGGGTTTCCTATAAGTACACTGGTACCACATGGGAACAAGTCGA... | 33,785 |
MZ819169.1 | Porcine astrovirus 5 | Flores,C., Ariyama,N., Bennett,B., Mena,J., Verdugo,C., Mor,S., Brito,B., Ramirez-Toloza,G., Neira,V., Bennet,B., Ramirez,G. | Universidad de Chile, The iThree Institute, Faculty of Science | Chile | 2022-01-08 | PoAstV5/Swine/CHI/CF2672/2017 | Porcine astrovirus 5 | null | Astroviridae | ssRNA(+) | 6,423 | GenBank | 1 | Chile | Chile | Sus scrofa | oronasopharynx | 2017 | null | null | UNVERIFIED: Porcine astrovirus 5 isolate PoAstV5/Swine/CHI/CF2672/2017, complete genome | TGTTGTTCGCTGATATAGTGACTTAATTCCTCCATATTGTCCTGTTACTAGCTTCTTGTGCTGTGACACCATGGACCAGCTCTTTCGTCGGGGTGACCCCTTCGCTAGGCGTTGGGTTGAGTCTAGGCCTGATGTCTATAAGAGTATGCTCAAACTTTTCCCTGACAATGCAGTTGTCTTTATAACACGTGCGCGTCATAACAGGGATTTTGCCCCTGTGGCATCATCCGTTGACCATGACTCTGAGTGGGTTTCCTATAAGTACACTGGTACTACATGGGAACAAGTCGACGAGGTTCCTGTCGATTCACAATCGGCAG... | 33,786 |
MZ819170.1 | Porcine astrovirus 5 | Flores,C., Ariyama,N., Bennett,B., Mena,J., Verdugo,C., Mor,S., Brito,B., Ramirez-Toloza,G., Neira,V., Bennet,B., Ramirez,G. | Universidad de Chile, The iThree Institute, Faculty of Science | Chile | 2022-01-08 | PoAstV5/Swine/CHI/FB036/2017 | Porcine astrovirus 5 | null | Astroviridae | ssRNA(+) | 6,499 | GenBank | 1 | Chile | Chile | Sus scrofa | feces | 2017 | null | null | Porcine astrovirus 5 isolate PoAstV5/Swine/CHI/FB036/2017, complete genome | GCAAAAGTGAGGTTGGCTGGCTCAGCTAGCTGTTGTTCGCTGATATAGTGACTTAATTCCTCCATATTGTCCTGTTACTAGCTTCTTGTGCTGTGACACCATGGACCAGCTCTTTCGTCGGGGTGACCCCTTCGCTAGGCGTTGGGTTGAGTCTAGGCCTGATGTCTATAAGAGTATGCTCAAACTTTTCCCTGACAATGCAGTTGTCTTTATAACACGTGCGCGTCATAACAGGGATTTTGCCCCTGTGGCATCATCCGTTGACCATGACTCTGAGTGGGTTTCCTATAAGTACACTGGTACTACATGGGAACAAGTCG... | 33,787 |
MZ819171.1 | Porcine astrovirus 5 | Flores,C., Ariyama,N., Bennett,B., Mena,J., Verdugo,C., Mor,S., Brito,B., Ramirez-Toloza,G., Neira,V., Bennet,B., Ramirez,G. | Universidad de Chile, The iThree Institute, Faculty of Science | Chile | 2022-01-08 | PoAstV5/Swine/CHI/FB033/2017 | Porcine astrovirus 5 | null | Astroviridae | ssRNA(+) | 6,498 | GenBank | 1 | Chile | Chile | Sus scrofa | oronasopharynx | 2017 | null | null | Porcine astrovirus 5 isolate PoAstV5/Swine/CHI/FB033/2017, complete genome | CCAAAAGTGAGGTTGGCTGGCTCAGCTAGCTGTTGTTCGCTGATATAGTGACTTAATTCCTCCATATTGTCCTGTTACTAGCTTCTTGTGCTGTGACACCATGGACCAGCTCTTTCGTCGGGGTGACCCCTTCGCTAGGCGTTGGGTTGAGTCTAGGCCTGATGTCTATAAGAGTATGCTCAAACTTTTCCCTGACAATGCAGTTGTCTTTATAACACGTGCGCGTCATAACAGGGATTTTGCCCCTGTGGCATCATCCGTTGACCATGACTCTGAGTGGGTTTCCTATAAGTACACTGGTACTACATGGGAACAAGTCG... | 33,788 |
MZ819172.1 | Porcine astrovirus 5 | Flores,C., Ariyama,N., Bennett,B., Mena,J., Verdugo,C., Mor,S., Brito,B., Ramirez-Toloza,G., Neira,V., Bennet,B., Ramirez,G. | Universidad de Chile, The iThree Institute, Faculty of Science | Chile | 2022-01-08 | PoAstV5/Swine/CHI/FB032/2017 | Porcine astrovirus 5 | null | Astroviridae | ssRNA(+) | 6,498 | GenBank | 1 | Chile | Chile | Sus scrofa | feces | 2017 | null | null | Porcine astrovirus 5 isolate PoAstV5/Swine/CHI/FB032/2017, complete genome | CCAAAAGTGAGGTTGGCTGGCTCAGCTAGCTGTTGTTCGCTGATATAGTGACTTAATTCCTCCATATTGTCCTGTTACTAGCTTCTTGTGCTGTGACACCATGGACCAGCTCTTTCGTCGGGGTGACCCCTTCGCTAGGCGTTGGGTTGAGTCTAGGCCTGATGTCTATAAGAGTATGCTCAAACTTTTCCCTGACAATGCAGTTGTCTTTATAACACGTGCGCGTCATAACAGGGATTTTGCCCCTGTGGCATCATCCGTTGACCATGACTCTGAGTGGGTTTCCTATAAGTACACTGGTACTACATGGGAACAAGTCG... | 33,789 |
MT642595.1 | Porcine astrovirus 5 | Mi,S., Guo,S., Xing,C., Xiao,C., He,B., Wu,B., Xia,X., Tu,C., Gong,W. | Jilin University, Key Laboratory of Zoonoses Research, Ministry of Education, College of Veterinary Medicine | China | 2020-10-28 | null | Porcine astrovirus 5 | null | Astroviridae | ssRNA(+) | 6,448 | GenBank | 1 | China: Bozhou City, Anhui Province | China | Sus scrofa | kidney, abdominal cavity | 2014-12 | null | null | Porcine astrovirus 5 strain PAstV5-AH29-2014, complete genome | GTTGGCTGGCTCCGCTAGCTGTTGTTCGCTGATAAAGTGATTTTTTATTCTTACATTGTCCTGTCATTAGCTTTCTTGCTTTGACACCATGGACCAGCTCTTTCGTCGGGGTGACCCCTTTGCTAGGCGCTGGGTTGAGTCTAGACCTGATGTCTATAAGAGCATGCTTAAGCTCTTTCCTGACAATGCAGTAGTCTTTATAACACGTGCACGTCATAATAGGGATTTTGCTCCTGTGGCATCGTCCGTTGACCATGACTCTGAGTGGGTTTCCTATAAGTACATTGGTACTACTTGGGAACAAGTCGATGAGGTTCCTG... | 46,245 |
JX556693.1 | Porcine astrovirus 5 | Xiao,C.T., Gimenez-Lirola,L.G., Gerber,P.F., Jiang,Y.H., Halbur,P.G., Opriessnig,T. | Department of Veterinary Diagnostic and Production Animal Medicine, College of Veterinary Medicine | USA | 2013-02-15 | AstV5-US-IA122 | Porcine astrovirus 5 | null | Astroviridae | ssRNA(+) | 6,500 | GenBank | 1 | USA | USA | Sus scrofa | feces | 2011-06-23 | null | null | Porcine astrovirus 5 isolate AstV5-US-IA122, complete genome | CCAAAAGTGAGGTTGGCTGGCTCCGCTAGCTGTTGTTCGCTGATATAGTGATTTAATCCTCTTTATATCGTCCTGTCAATAGCTTCTTTGCTGTGACATTATGGACCAGCTCTTTCGTCGGGGTGATCCTTTCGCTAGGCGTTGGGTCGAGTCTAGGCCTGAGGTCTATAAGAGTATGCTCAAACTCTTCCCTGACAATGCAGTTGTCTTTATAACACGTGCGCGTCACAATAGGGATTTTGCCCCTGTGGCATCATCCGTCGACCATGACTCTGAGTGGGTTTCCTATAAGTACACTGGTACCACATGGGAACAAGTCG... | 95,240 |
JF713711.1 | Porcine astrovirus 5 | Shan,T., Li,L., Simmonds,P., Wang,C., Moeser,A., Delwart,E. | University of California-San Francisco, Blood Systems Research Institute, Department of Laboratory Medicine | USA | 2011-11-02 | null | Porcine astrovirus 5 | null | Astroviridae | ssRNA(+) | 6,478 | GenBank | 1 | USA | USA | Sus scrofa | feces | 2010 | null | null | Porcine astrovirus 5 strain 33/USA, complete genome | TGGCTCCGCTAGCTGTTGTTCGCTGATATAGTGATTCAATTCCTCTATTGTCCTGTCAATAGCCCTTTGCTGTGACATTATGGACCAGCTCTTTCGTCGGGGTGATCCTTTCGCTCGGCGTTGGGTCGAGTCTAGGCCTGATGTCTATAAGAGTATGCTCAAACTCTTCCCTGACAATGCAGTTATCTTTATAACACGTGCGCGTCACAATAGGGATTTTGCTCCTGTGGCATCATCCGTTGACCATGACTCTGAGTGGGTTTCCTATAAGTACACCGGTACCACATGGGAACAAGTCGACGAGGTTCCTGTCGATTCAC... | 97,931 |
NC_023673.1 | Porcine bocavirus | Wang,E., Liu,W., Yang,B., Liu,J., Ma,X., Lan,X. | National Center for Biotechnology Information, NIH | USA | 2014-03-07 | swBoV CH437 | Porcine bocavirus | Bocaparvovirus | Parvoviridae | ssDNA(+/-) | 5,275 | RefSeq | 1 | China: Gansu province | China | Sus scrofa | feces | 2012-06 | null | PRJNA485481 | Porcine bocavirus isolate swBoV CH437, complete genome | CCCACACAAGGAAATAAGTATCGGAAAAATAGGGGTTGGCTGGAGATAATGATAGACACGCCTTTTCGGGCACAGCCAATCACAGCGATGGGGTGATTTGACGTGGCTGATTCTGATAGGCTGGAGGACTCTATATAAGGAGAGCAACCAGGAAATAGAGTTCATTCTGCGGCTGGACGCGGAGCTGTTCACATCGATGCAGAAAGAGCGCGTGAGACACTACACCTTCTTCTATTGATGTACATTCTGCCTGAGAAGAGACTACTACAGTCTGTGGACATCGCTCCGCGGGAGAAGACGTCCTGTGAAGGTATATTATG... | 6,622 |
OM274029.1 | Porcine bocavirus | Chen,J. | Anhui Agricultural University, College of Animal Science and Technology | China | 2022-12-21 | AH-16 | Porcine bocavirus | Bocaparvovirus | Parvoviridae | ssDNA(+/-) | 5,307 | GenBank | null | China | China | Sus scrofa | null | 2020 | null | null | UNVERIFIED: Porcine bocavirus isolate AH-16 NS1-like, NP1-like, and VP1/VP2-like genes, complete sequence | CCGATTATTTTTTCCTGGTGTGTTGGGTGTTGATTGGATCGTCCTGCGAGATTCCACGCGCGCGCGCAGCGCAGAGCGGCGGAGCCCCTCGTGTGTGATGAGCCTGGACGATCCAATCAACACCCAACACACCAGGAAAAAATAATCGGAAAAATAGGGGTTGGCTGGAGATAATGATAGACACGCCTTTTCGGGCACAGCCAATCACAGCGATGGGGTGATTTGACGTGGACGATTCTGATTGGATAAAAGACTCTATATAAGGAGAGCAACCAGGAAATAAAGTTCATTCTGCGGCTGGACGTCGGACTGTGCGGATG... | 20,277 |
OM274030.1 | Porcine bocavirus | Chen,J. | Anhui Agricultural University, College of Animal Science and Technology | China | 2022-12-21 | AH-23 | Porcine bocavirus | Bocaparvovirus | Parvoviridae | ssDNA(+/-) | 5,360 | GenBank | null | China | China | Sus scrofa | null | 2020 | null | null | UNVERIFIED: Porcine bocavirus isolate AH-23 NS1-like, NP1-like, and VP1/VP2-like genes, complete sequence | TCTATCATTATCTCCAGCCAACCCCTATTTTTCCGATTATTTTTTCCTGGTGTGTTGGGTGTTGATTGGATCGTCCTGCGAGATCCCACGCGCGCGCGCAGCGCGCAGCGGCGAAGCCGCTCGTGTGTGATGAGCCTGGACGATCCAATCAACACCCAACACACCAGGAAAAAATAATCGGAAAAATAGGGGTTGGCTGGAGATAATGATAGACACGCCTTTTCGGGCACAGCCAATCACAGCGATGGGGTGATTTGACGTGGCTGATTCTGATAGGCTGGAGGATTCTATATAAGGAGAGCAACCAGGAAATAAAGCTC... | 20,278 |
OM274031.1 | Porcine bocavirus | Chen,J. | Anhui Agricultural University, College of Animal Science and Technology | China | 2022-12-21 | AH-25 | Porcine bocavirus | Bocaparvovirus | Parvoviridae | ssDNA(+/-) | 5,481 | GenBank | null | China | China | Sus scrofa | null | 2020 | null | null | UNVERIFIED: Porcine bocavirus isolate AH-25 NS1-like, NP1-like, and VP1/VP2-like genes, complete sequence | ATCTTGTCGCGCGCCCGCGCGACATGGCGCGCGCGCAGCGCGCGCGGCGAAGCCGCCGCCATTTCAGCCAGCGCGACAAGATGGCGTACTACATGTACATAGAAGTTATAACAAGATGTCTGCCTGATCTCATTTGCATATCAGATTGGACCTTGAGCCCAACATATGGAGTAACTGATCGCGTGTGATAGAGCCATAAAGATGTGAAATTATTAACTTTTGGGTAAATGTTAAGAGAATAATTAACCTTGAGCGGGGATATAAGAGCTGAAATCGAAAGCGCTGGAGTCACTGCGAGCCTGGCTGCGAGCGAGGACGAC... | 20,279 |
OM274032.1 | Porcine bocavirus | Chen,J. | Anhui Agricultural University, College of Animal Science and Technology | China | 2022-12-21 | AH-36 | Porcine bocavirus | Bocaparvovirus | Parvoviridae | ssDNA(+/-) | 5,263 | GenBank | null | China | China | Sus scrofa | null | 2020 | null | null | UNVERIFIED: Porcine bocavirus isolate AH-36 NS1-like, NP1-like, and VP1/VP2-like genes, complete sequence | TTATACTTTTTTTCCACCACAAGCACACCATTTTTGATCTTTAGGCCCAGGCGCTTTGATATACACCGCGCGGGCGCGGCGCGCCCGCCGAAGGCGGGGCGATATAAGCAATGCGCATGCGCATAAGCATCAAACATGGTGTCCTAGTGGTGAAATAAAGTTATAACAATACAAAATATTATTATAATTACGTCATATCCGGTCATGCGCAAAATCATATACGGAACTAAAAGTGCACAATCATCGGAAGAACCTTGAAAGGTCGTTGTGTAATTTCTAATAACTAACTAAATGGGTGGAGTTATGAACTGTATAAAAGG... | 20,280 |
OM274033.1 | Porcine bocavirus | Chen,J. | Anhui Agricultural University, College of Animal Science and Technology | China | 2022-12-21 | AH-70 | Porcine bocavirus | Bocaparvovirus | Parvoviridae | ssDNA(+/-) | 5,405 | GenBank | null | China | China | Sus scrofa | null | 2018 | null | null | UNVERIFIED: Porcine bocavirus isolate AH-70 NS1-like, NP1-like, and VP1/VP2-like genes, complete sequence | ATTGTTATTATCTTAATATCAACTACCAGGACTCCATGTTTGATTGTCTGCGCTTGCGCGCAGCTATACATCGCGCGCGCGCAGCGCGCCCGCCGAAGGCGGGGCGATATAAGCAAGCGCAAGCGCAGACAATCAAACATGGAGTCCTGGTAGTTGATATTAAGATAATAACAATACGTAAGCATATTGTCATATCCGGGCATGCGCACTAGGGGAGATTTTTGCTGAATCACCGGATATAGGAAATCTTTTTTGCTAAATCACAGGAAACAGGAACTCAAAAAAATGCAAAATCACAGGATATAGGAAGACTTTTTTGC... | 20,281 |
MH016288.1 | Porcine bocavirus | Libisch,B., Kereszteny,T., Vitanyi,B., Kerenyi,Z., Papp,P., Olasz,F. | Agricultural Biotechnology Institute, Department of Genetics | Hungary | 2020-02-28 | FKI | Porcine bocavirus | Bocaparvovirus | Parvoviridae | ssDNA(+/-) | 5,337 | GenBank | null | Hungary | Hungary | Sus scrofa | null | 2016 | null | null | Porcine bocavirus isolate FKI, complete genome | GGACGATCCAATCATCACTACCCACACAAGGAAATAAGTATCGAAAAAATAGGGATAGGCGGGAGATAATGATAGACACGCCTTTTCGGGCACAGCCAATGAGGGATATGAGGTGATATGACGTCAAAAGACCTGATTGGGTGGGAGGGTCTATATAAGGAGGGAACCAGGAAGAAGAGCTCATTCTGCTCCGGGACATCGAGGTGTTCACATCGATGCAGGTGAGAGCGGCTCGGCTCTTCTATTGATGTACATTCTGCCTGAGAAGAGGCTACAGTCTGAGCTCATCGCTCCACGGGAGAAGACAGCTCCGGCAAGTA... | 53,758 |
MN481505.1 | Porcine bocavirus | Aryal,M., Xin,H., Liu,G. | Chinese Academy of Agricultural Sciences, Preventive Veterinary Medicine | China | 2020-02-12 | China_2018 | Porcine bocavirus | Bocaparvovirus | Parvoviridae | ssDNA(+/-) | 5,163 | GenBank | null | China: Hebei province | China | Sus scrofa | feces | 2018-08 | null | null | Porcine bocavirus isolate China_2018, complete genome | GGAGATAATGATAGACACGCCTTTTCGGGCACAGCCAATGACGGCGATGGGGTGACATGACGTCAACGATCCTGATTGGGTGGGAGGGTCTATATAAGGAGGAAACCAGGAAGAGGAGCTCATTCTTCGGCGGGACATCGAGGTGTTCACATCGAGGAAGCTCCTGAGATCATCGCTGGCGAAGACAGCTCCGGCAAGTACTCTCTTATATCTGCTGGCATGGCTTCTGCTGGAGTTGGGCTGTCTGATCAGGAGTGGATTAATTACTGGCATGGAGCTATTACAGGCTTTAAGAGCCCATGCTATACATATGTCATTCA... | 53,928 |
MH454686.1 | Porcine bocavirus | Zheng,H., Han,H., Chen,H., Hou,H. | Henan Agricultural University, College of Animal Science and Veternary Medicine | China | 2018-07-28 | PBoV-TY | Porcine bocavirus | Bocaparvovirus | Parvoviridae | ssDNA(+/-) | 5,156 | GenBank | null | China | China | Sus scrofa | null | 2017-10-27 | null | null | Porcine bocavirus isolate PBoV-TY, complete genome | GATAGAGCCATAAAGATGTGAAATTATTAACTTTTGGGTAAATGTTAAGAGAATAATTAACCTTGAGCGGGGATATAAGAGCTGAAATCGAAAGCGCTGGAGTCACTGCGAGCCTGGCTGCGAGCGAGAGCGACGTTGGGTGAGTGCGATGGAGTGCTTCGATCTGGGAGAATACGCTACCGCTGATGACTTTCTGGGCTTTCGGGACCCTGCATACACCTATATCATACGTCTGCCTTTTAGAGACTGGAGGGGACTAGAGAATGTGCTTCAGCACGCCTGCACTCCAGCTCAGTATAGAGAGCTGCTGGACGTGGATG... | 69,695 |
MF085373.1 | Porcine bocavirus | Wang,Y., Zhao,J., Zheng,M., Liu,Z., Shen,Q., Fan,Z., Jiang,L., Yang,S. | Jiangsu University, School of Medicine | China | 2017-09-25 | PBov-JZ08 | Porcine bocavirus | Bocaparvovirus | Parvoviridae | ssDNA(+/-) | 5,156 | GenBank | null | China | China | Mustela lutreola | feces | 2016-04-02 | null | null | Porcine bocavirus isolate PBov-JZ08, complete genome | GTATGCGCATGCGCGTTGATATACATCGCGCGCGCGAAGCGCGCCCGCCGCAGGCGGGGCGATATAAGCAACGCGCATGCGCATACAACATGGAGTCCTAGTGGTGAAATAAAGTTATAACAATACAAAATGGATGTGTAATGTGACGTCATATCCGGACATGCGCACTTTCTTATGCGGAAATAAAATTGCTCAGTCATCGGAAGAACCTTGAAAGGGTATCGTGTAATATTTAATAAGTTACTAAATGGGTGGAGTTATGCACTGTATAAAAGACGAGAACACCAGTTCTCTTCCTCTTTCTTCGCACTCGCAGAAAG... | 74,577 |
KX017193.1 | Porcine bocavirus | Qiao,H., Chen,H.Y., Fu,P.F., Yang,M.F., Han,H.Y., Zhang,Y., Yang,X.W., Xu,P.L. | Henan Agricultural University, College of Animal Husbandry and Veterinary Science | China | 2016-05-23 | null | Porcine bocavirus | Bocaparvovirus | Parvoviridae | ssDNA(+/-) | 5,173 | GenBank | null | China: Henan | China | Sus scrofa | null | null | null | null | Porcine bocavirus strain CH/HNZM, complete genome | GATAGAGCCATAAAGATGTGAAATTATTAACTTTTGGGTAAATGTTAAGAGAATAATTAACCTTGAGCGGGGATATAAGAGCTGAAATCGAAAGCGCTGGAGTCACTGCGAGCCTGGCTGCCAGCGAGGACGACGTTGGGTGAGTGCGATGGAGACCTACGCTCTGGGAGAATACGCTACTGCTGATGACTTTCTGGGCTTTCGGGACCCTGCATACACCTATATCATACGTCTGCCTTTCAGAGACTGGCGGGGGTTAGAGAATGTGCTTCAGCACGCCTGCACTCCAGCTCAGTATAGACAGCTGCTGGACGTGGATG... | 81,911 |
KM402139.1 | Porcine bocavirus | Zhou,Y., Tang,F.L., Zhu,K.S., Zhu,W.Z., Luo,Z.J., Lin,X.Z. | Huizhou Entry-Exit Inspection and Quarantine Bureau of P.R.C., Animal Quarantine | China | 2014-11-26 | GD11 | Porcine bocavirus | Bocaparvovirus | Parvoviridae | ssDNA(+/-) | 5,019 | GenBank | null | China: Guangdong | China | Sus scrofa | null | 2013-12-09 | null | null | Porcine bocavirus isolate GD11, complete genome | GACGCTGGGTGAGTGCGATGGAGTGCTACGCTCTGGGACAATACGCTACCTATGAGGACTTTCTGGGCTTTCGGGATCCTGCATACACCTATATCATACGTCTGCCTTTTAGAGACTGGCGGGGACTAGAGAATGGGCTTCAACACATCTGCACTCCAGCTGAGTATAGAGAGCTGCTGGACGTGGATGATGCTGGGCATACTGTGTTTGATGATGCTCCAGACAATACAGACACTGCTGCTCTCCTGCATTTTATGGCCAGGAACGGGCCTCAGTGGCATTATGGAAGATTTCTCATACACTGTGCGCATCGCGCGGTC... | 88,636 |
KF360033.1 | Porcine bocavirus | Wang,E., Liu,W., Yang,B., Liu,J., Ma,X., Lan,X. | Chinese Academy of Agricultural Sciences, State Key Laboratory of Veterinary Etiological Biology, Key Laboratory of Grazing Animal Diseases, Lanzhou Veterinary Research Institute | China | 2013-10-29 | swBoV CH437 | Porcine bocavirus | Bocaparvovirus | Parvoviridae | ssDNA(+/-) | 5,275 | GenBank | 1 | China: Gansu province | China | Sus scrofa | feces | 2012-06 | null | null | Porcine bocavirus isolate swBoV CH437, complete genome | CCCACACAAGGAAATAAGTATCGGAAAAATAGGGGTTGGCTGGAGATAATGATAGACACGCCTTTTCGGGCACAGCCAATCACAGCGATGGGGTGATTTGACGTGGCTGATTCTGATAGGCTGGAGGACTCTATATAAGGAGAGCAACCAGGAAATAGAGTTCATTCTGCGGCTGGACGCGGAGCTGTTCACATCGATGCAGAAAGAGCGCGTGAGACACTACACCTTCTTCTATTGATGTACATTCTGCCTGAGAAGAGACTACTACAGTCTGTGGACATCGCTCCGCGGGAGAAGACGTCCTGTGAAGGTATATTATG... | 92,800 |
KF206154.1 | Porcine bocavirus | Cadar,D., Csagola,A., Lorincz,M., Novosel,D., Becskei,Z., Tuboly,T. | USAMV, Department of Infectious Diseases | Romania | 2013-08-04 | null | Porcine bocavirus | Bocaparvovirus | Parvoviridae | ssDNA(+/-) | 5,053 | GenBank | null | Serbia | Serbia | Sus scrofa domesticus | null | 2010 | null | null | Porcine bocavirus strain 20ZS-RS, complete genome | GCCAGTGACAGGGAGGGGGGACCCGACGTCAATGATTCTGATGGGGTGGGAGGGTATAGATAAGGACGAAACCAGGAAGAGGAGCTCATTCTCGGCGGGACATCGAGGTCTTCACATCGGAGAAGCTCATGAGATCATCGCTGGCGAAGACAGCTCCGGCAAGTACTCTCTTATATCTGCTGGCATGGCTTCTGCTGGAGTTGGGCTGTCTGATCAGGAGTGGATTAATTACTGGCATGGAGCTATTACAGGCTTTAAGAGCCCATGCTATACATATGTCATTCATCTGGATCTTCAGGACTGGAGACCTCATGAGAGGG... | 93,541 |
KF206164.1 | Porcine bocavirus | Cadar,D., Csagola,A., Lorincz,M., Novosel,D., Becskei,Z., Tuboly,T. | SZIEAOTK, Department of Microbiology and Infectious Diseases | Hungary | 2013-08-04 | null | Porcine bocavirus | Bocaparvovirus | Parvoviridae | ssDNA(+/-) | 5,109 | GenBank | null | Croatia | Croatia | Sus scrofa domesticus | null | 2010 | null | null | Porcine bocavirus strain 703-3DI-HR, complete genome | GGTAGTTATGACGTGCAAAATTCTGATAGGGCTGGGAGGACGTCTATATAAGGAGAGCAACCAGGAGATAGAGTTCATTCTGCGGCTGGACACGGACGCTGTTCACATCGATACGGGTGAGAATACGCAAGAATACCATTTGATGTACATTCTGCCTGAGAAGAAACTGCTACAGTCTGAGATCATCGCTCCGCGGGAGAAGACTTCATTTGAAGGTATACTATGGCTGCTGGCATGGCTTCTGCTAGAGTTGGGCTGTCTGATCAGGAATGGCTGGGTTATTGGCACGGAGCTATTTCTGGTTTCAAGAATCCCAGCTA... | 93,542 |
KF206166.1 | Porcine bocavirus | Cadar,D., Csagola,A., Lorincz,M., Novosel,D., Becskei,Z., Tuboly,T. | SZIEAOTK, Department of Microbiology and Infectious Diseases | Hungary | 2013-08-04 | null | Porcine bocavirus | Bocaparvovirus | Parvoviridae | ssDNA(+/-) | 5,049 | GenBank | null | Croatia | Croatia | Sus scrofa domesticus | null | 2011 | null | null | Porcine bocavirus strain 710-3DI-HR, complete genome | GGGGGGATATGACGTCAACGATCCTGATTGGGTGGGAGGGTCTATATAAGGAGGAAACCAGGAAGAGGAGCTCATTCTTCGGCGGGACATCGAGATGTTCACATCGATAAAATGAGCTTCTGTCATCGTTCTCGTTTGAGATCATCGCTGGCGAAGACAGCTCCGGCAAGTACTCTATTATATCTGCTGTCATGGCTTCTGCTGGAGTTGGGCTGTCTGATCAGGAATGGATTAATTTCTGGCATGGAGCTATTACAGGCTTTAAGAATCCATGCTATACATATGTCATTCGCGTGGATATTAAGGACTGGAGAGTTAAT... | 93,543 |
KF206168.1 | Porcine bocavirus | Cadar,D., Csagola,A., Lorincz,M., Novosel,D., Becskei,Z., Tuboly,T. | SZIEAOTK, Department of Microbiology and Infectious Diseases | Hungary | 2013-08-04 | null | Porcine bocavirus | Bocaparvovirus | Parvoviridae | ssDNA(+/-) | 5,001 | GenBank | null | Hungary | Hungary | Sus scrofa domesticus | null | 2011 | null | null | Porcine bocavirus strain G85-3AT-HU, complete genome | CTGACACATGAGAATGATGATTATTCTGCAGAAGAGAATGCTACAATCTATGGTCATCGCTCCGCGGGAGAAGACAGCTCCGGCAAGTATCCTCTTATATCTGCTGGCATGGCTTCTCTTGGAGTTGGGCTGTCTGATCAGGAATGGCTTAGTTATTGGCACGGAGCTATTACTGGTTTCAAGAATCCCAGCTTTAGTTATGTCATCAGAATTGATATTAAGGATTGGAGAGTCGCTGAGCGTGCCATTATGGACATTTTTTCTAAAGATCTACCGTCCATCTTGGATGATCTGGTAGATTCTGAGAAGGAGTTTCTGCT... | 93,544 |
NC_039208.1 | Porcine coronavirus HKU15 | Woo,P.C., Lau,S.K., Lam,C.S., Lau,C.C., Tsang,A.K., Lau,J.H., Bai,R., Teng,J.L., Tsang,C.C., Wang,M., Zheng,B.J., Chan,K.H., Yuen,K.Y., Woo,P.C.Y., Lau,S.K.P., Lam,C.S.F., Lau,C.C.Y., Tsang,A.K.L., Lau,J.H.N., Teng,J.L.L., Tsang,C.C.C., Zheng,B.-J., Chan,K.-H., Yuen,K.-Y. | National Center for Biotechnology Information, NIH | USA | 2018-08-24 | null | Coronavirus HKU15 | Deltacoronavirus | Coronaviridae | ssRNA(+) | 25,425 | RefSeq | 1 | China: Hong Kong | China | Sus scrofa | null | 2010 | null | PRJNA485481 | Porcine coronavirus HKU15 strain HKU15-155, complete genome | GACTAAAGATAAAAATTATAGCATTAGTCTATAATTTTATCTCCCTAGCTTCGCTAGTTCTCTACCGACACCAATCCAGGTGCGTCTGCCACCAAGTTGGCTACCCTTTCTAGGGGCGCTTTTGCGCTTGCTCACCATTAGATTACCTGGAAACCAGCCATTCAGGTTGGAGTTTCCCCAGGCTCTTTTGTGTGGGCATTAGCGGCTTGTGGTTTTTGCACAAAATYTAAGCTACTTACCGTTCCTCTGACCATCCACCACTTCTATAGACAGCACTGACTACCGTAGGGTTTAAGTCACACCGGTCTGCACCGCCCGTC... | 4,225 |
KT381613.1 | Porcine coronavirus HKU15 | Wang,L., Hayes,J., Sarver,C., Byrum,B., Zhang,Y. | Ohio Department of Agriculture, Animal Diseases Diagnostic Lab | USA | 2015-10-19 | null | Coronavirus HKU15 | Deltacoronavirus | Coronaviridae | ssRNA(+) | 25,422 | GenBank | 1 | USA: Ohio | USA | Sus scrofa | null | 2014-05-07 | null | null | Porcine coronavirus HKU15 strain OH11846, complete genome | ACATGGGGACTAAAGATAAAAATTATAGCATTAGTCTATAATTTTATCTCCCTAGCTTCGCTAGTTCTCTACCGACACCAATCCAGGTGCGTCTGCCACCAAGTTGGCTACCCTTCCTAGGGGCGCTTTCGCGCTTGCTCACCATTAGATTACCTGGAAACCAGCCATTCAGGTTGGAGTTTCCCCAGGCTCTTTTGTGTGGGCATTAGCGGCTTGTGGTTTTTGCACAAAATCTAAGCTACTTACCGTTCCTCTGACCATCCACCACTTCTATAGACAGCACTGATTACCGTAGGGTTTAAGTCACACCGGTCTGCACC... | 85,183 |
KM012168.1 | Porcine coronavirus HKU15 | Killian,M.L., Koster,L.G., Jenkins-Moore,M., Swenson,S.L. | National Veterinary Services Laboratories, Diagnostic Virology Laboratory | USA | 2014-09-24 | null | Coronavirus HKU15 | Deltacoronavirus | Coronaviridae | ssRNA(+) | 25,411 | GenBank | null | USA: Michigan | USA | Sus scrofa | null | 2014-03-17 | null | null | Porcine coronavirus HKU15 strain Michigan/8977/2014, complete genome | AAAGATAAAAATTATAGCATTAGTCTATAATTTTATCTCCCTAGCTTCGCTAGTTCTCTACCGACACCAATCCAGGTGCGTCTGCCACCAAGTTGGCTACCCTTCCTAGGGGCGCTTTCGCGCTTGCTCACCATTAGATTACCTGGAAACCAGCCATTCAGGTTGGAGTTTCCCCAGGCTCTTTTGTGTGGGCATTAGCGGCTTGTGGTTTTTGCACAAAATCTAAGCTACTTACCGTTCCTCTGACCATCCACCACTTCTATAGACAGCACTGATTACCGTAGGGTTTAAGTCACACCGGTCTGCACCGCCCGTCAGCG... | 88,933 |
KJ620016.1 | Porcine coronavirus HKU15 | Wang,L., Byrum,B., Zhang,Y. | Ohio Department of Agriculture, Animal Diseases Diagnostic Lab | USA | 2014-06-07 | null | Coronavirus HKU15 | Deltacoronavirus | Coronaviridae | ssRNA(+) | 25,422 | GenBank | 1 | USA: Michigan | USA | Sus scrofa | null | 2014-03-18 | null | null | Porcine coronavirus HKU15 strain MI6148, complete genome | ACATGGGGACTAAAGATAAAAATTATAGCATTAGTCTATAATTTTATCTCCCTAGCTTCGCTAGTTCTCTACCGACACCAATCCAGGTGCGTCTGCCACCAAGTTGGCTACCCTTCCTAGGGGCGCTTTCGCGCTTGCTCACCATTAGATTACCTGGAAACCAGCCATTCAGGTTGGAGTTTCCCCAGGCTCTTTTGTGTGGGCATTAGCGGCTTGTGGTTTTTGCACAAAATCTAAGCTACTTACCGTTCCTCTGACCATCCACCACTTCTATAGACAGCACTGATTACCGTAGGGTTTAAGTCACACCGGTCTGCACC... | 90,206 |
KJ584355.1 | Porcine coronavirus HKU15 | Wang,L., Byrum,B., Zhang,Y. | Ohio Department of Agriculture, Animal Diseases Diagnostic Lab | USA | 2014-06-03 | null | Coronavirus HKU15 | Deltacoronavirus | Coronaviridae | ssRNA(+) | 25,422 | GenBank | 1 | USA: Ohio | USA | Sus scrofa | null | 2014-02-12 | null | null | Porcine coronavirus HKU15 strain IL2768, complete genome | ACATGGGGACTAAAGATAAAAATTATAGCATTAGTCTATAATTTTATCTCCCTAGCTTCGCTAGTTCTCTACCGACACCAATCCAGGTGCGTCTGCCACCAAGTTGGCTACCCTTCCTAGGGGCGCTTTCGCGCTTGCTCACCATTAGATTACCTGGAAACCAGCCATTCAGGTTGGAGTTTCCCCAGGCTCTTTTGTGTGGGCATTAGCGGCTTGTGGTTTTTGCACAAAATCTAAGCTACTTACCGTTCCTCTGACCATCCACCACTTCTATAGACAGCACTGATTACCGTAGGGTTTAAGTCACACCGGTCTGCACC... | 90,218 |
KJ584356.1 | Porcine coronavirus HKU15 | Wang,L., Byrum,B., Zhang,Y. | Ohio Department of Agriculture, Animal Diseases Diagnostic Lab | USA | 2014-06-03 | null | Coronavirus HKU15 | Deltacoronavirus | Coronaviridae | ssRNA(+) | 25,422 | GenBank | 1 | USA: South Dakota | USA | Sus scrofa | null | 2014-02-20 | null | null | Porcine coronavirus HKU15 strain SD3424, complete genome | ACATGGGGACTAAAGATAAAAATTATAGCATTAGTCTATAATTTTATCTCCCTAGCTTCGCTAGTTCTCTACCGACACCAATCCAGGTGCGTCTGCCACCAAGTTGGCTACCCTTCCTAGGGGCGCTTTCGCGCTTGCTCACCATTAGATTACCTGGAAACCAGCCATTCAGGTTGGAGTTTCCCCAGGCTCTTTTGTGTGGGCATTAGCGGCTTGTGGTTTTTGCACAAAATCTAAGCTACTTACCGTTCCTCTGACCATCCACCACTTCTATAGACAGCACTGATTACCGTAGGGTTTAAGTCACACCGGTCTGCACC... | 90,219 |
KJ584357.1 | Porcine coronavirus HKU15 | Wang,L., Byrum,B., Zhang,Y. | Ohio Department of Agriculture, Animal Diseases Diagnostic Lab | USA | 2014-06-03 | null | Coronavirus HKU15 | Deltacoronavirus | Coronaviridae | ssRNA(+) | 25,422 | GenBank | 1 | USA: Kentucky | USA | Sus scrofa | null | 2014-03-07 | null | null | Porcine coronavirus HKU15 strain KY4813, complete genome | ACATGGGGACTAAAGATAAAAATTATAGCATTAGTCTATAATTTTATCTCCCTAGCTTCGCTAGTTCTCTACCGACACCAATCCAGGTGCGTCTGCCACCAAGTTGGCTACCCTTCCTAGGGGCGCTTTCGCGCTTGCTCACCATTAGATTACCTGGAAACCAGCCATTCAGGTTGGAGTTTCCCCAGGCTCTTTTGTGTGGGCATTAGCGGCTTGTGGTTTTTGCACAAAATCTAAGCTACTTACCGTTCCTCTGACCATCCACCACTTCTATAGACAGCACTGATTACCGTAGGGTTTAAGTCACACCGGTCTGCACC... | 90,220 |
KJ584358.1 | Porcine coronavirus HKU15 | Wang,L., Byrum,B., Zhang,Y. | Ohio Department of Agriculture, Animal Diseases Diagnostic Lab | USA | 2014-06-03 | null | Coronavirus HKU15 | Deltacoronavirus | Coronaviridae | ssRNA(+) | 25,422 | GenBank | 1 | USA: Pennsylvania | USA | Sus scrofa | null | 2014-02-18 | null | null | Porcine coronavirus HKU15 strain PA3148, complete genome | ACATGGGGACTAAAGATAAAAATTATAGCATTAGTCTATAATTTTATCTCCCTAGCTTCGCTAGTTCTCTACCGACACCAATCCAGGTGCGTCTGCCACCAAGTTGGCTACCCTTCCTAGGGGCGCTTTCGCGCTTGCTCACCATTAGATTACCTGGAAACCAGCCATTCAGGTTGGAGTTTCCCCAGGCTCTTTTGTGTGGGCATTAGCGGCTTGTGGTTTTTGCACAAAATCTAAGCTACTTACCGTTCCTCTGACCATCCACCACTTCTATAGACAGCACTGATTACCGTAGGGTTTAAGTCACACCGGTCTGCACC... | 90,221 |
KJ584359.1 | Porcine coronavirus HKU15 | Wang,L., Byrum,B., Zhang,Y. | Ohio Department of Agriculture, Animal Diseases Diagnostic Lab | USA | 2014-06-03 | null | Coronavirus HKU15 | Deltacoronavirus | Coronaviridae | ssRNA(+) | 25,422 | GenBank | 1 | USA: Nebraska | USA | Sus scrofa | null | 2014-02-21 | null | null | Porcine coronavirus HKU15 strain NE3579, complete genome | ACATGGGGACTAAAGATAAAAATTATAGCATTAGTCTATAATTTTATCTCCCTAGCTTCGCTAGTTCTCTACCGACACCAATCCAGGTGCGTCTGCCACCAAGTTGGCTACCCTTCCTAGGGGCGCTTTCGCGCTTGCTCACCATTAGATTACCTGGAAACCAGCCATTCAGGTTGGAGTTTCCCCAGGCTCTTTTGTGTGGGCATTAGCGGCTTGTGGTTTTTGCACAAAATTTAAGCTACTTACCGTTCCTCTGACCATCCACCACTTCTATAGACAGCACTGATTACCGTAGGGTTTAAGTCACACCGGTCTGCACC... | 90,222 |
KJ462462.1 | Porcine coronavirus HKU15 | Wang,L., Byrum,B., Zhang,Y. | Ohio Department of Agriculture, Animal Diseases Diagnostic Lab | USA | 2014-03-30 | null | Coronavirus HKU15 | Deltacoronavirus | Coronaviridae | ssRNA(+) | 25,422 | GenBank | 1 | USA: Ohio | USA | Sus scrofa | null | 2014-01-31 | null | null | Porcine coronavirus HKU15 strain OH1987, complete genome | ACATGGGGACTAAAGATAAAAATTATAGCATTAGTCTATAATTTTATCTCCCTAGCTTCGCTAGTTCTCTACCGACACCAATCCAGGTGCGTCTGCCACCAAGTTCGCTACCCTTCCTAGGGGCGCTTTCGCGCTTGCTCACCATTAGATTACCTGGAAACCAGCCATTCAGGTTGGAGTTTCCCCAGGCTCTTTTGTGTGGGCATTAGCGGCTTGTGGTTTTTGCACAAAATCTAAGCTACTTACCGTTCCTCTGACCATCCACCACTTCTATAGACAGCACTGATTACCGTAGGGTTTAAGTCACACCGGTCTGCACC... | 91,275 |
KJ569769.1 | Porcine coronavirus HKU15 | Wang,L., Zhang,Y., Byrum,B. | Ohio Department of Agriculture, Animal Diseases Diagnostic Lab | USA | 2014-03-30 | null | Coronavirus HKU15 | Deltacoronavirus | Coronaviridae | ssRNA(+) | 25,422 | GenBank | 1 | USA: Ohio | USA | Sus scrofa | null | 2014-02-13 | null | null | Porcine coronavirus HKU15 strain IN2847, complete genome | ACATGGGGACTAAAGATAAAAATTATAGCATTAGTCTATAATTTTATCTCCCTAGCTTCGCTAGTTCTCTACCGACACCAATCCAGGTGCGTCTGCCACCAAGTTGGCTACCCTTCCTAGGGGCGCTTTCGCGCTTGCTCACCATTAGATTACCTGGAAACCAGCCATTCAGGTTGGAGTTTCCCCAGGCTCTTTTGTGTGGGCATTAGCGGCTTGTGGTTTTTGCACAAAATTTAAGCTACTTACCGTTCCTCTGACCATCCACCACTTCTATAGACAGCACTGATTACCGTAGGGTTTAAGTCACACCGGTCTGCACC... | 91,276 |
JQ065042.2 | Porcine coronavirus HKU15 | Woo,P.C., Lau,S.K., Lam,C.S., Lau,C.C., Tsang,A.K., Lau,J.H., Bai,R., Teng,J.L., Tsang,C.C., Wang,M., Zheng,B.J., Chan,K.H., Yuen,K.Y., Woo,P.C.Y., Lau,S.K.P., Lam,C.S.F., Lau,C.C.Y., Tsang,A.K.L., Lau,J.H.N., Teng,J.L.L., Tsang,C.C.C., Zheng,B.-J., Chan,K.-H., Yuen,K.-Y. | The University of Hong Kong, Department of Microbiology | China | 2012-03-19 | null | Coronavirus HKU15 | Deltacoronavirus | Coronaviridae | ssRNA(+) | 25,430 | GenBank | 1 | China: Hong Kong | China | Sus scrofa | null | 2009 | null | null | Porcine coronavirus HKU15 strain HKU15-44, complete genome | GACTAAAGATAAAAATTATAGCATTAGTCTATAATTTTATCTCCCTAGCTTCGCTAGTTCTCTACCGACACCAATCCAGGTGCGTCTGCCACCAAGTTGGCTACCCTTCCTAGGGGCGCTTTCGCGCTTGCTCACCATTAGATTACCTGGAAACCAGCCATTCAGGTTGGAGTTTCCCCAGGCTCTTTTGTGTGGGCATTAGCGGCTTGTGGTTTTTGCACAAAATCTAAGCTACTTACCGTTCCTCTGACCATCCACCACTTCTATAGACAGCACTGACTACCGTAGGGTTTAAGTCACACCGGTCTGCACCGCCCGTC... | 97,401 |
JQ065043.2 | Porcine coronavirus HKU15 | Woo,P.C., Lau,S.K., Lam,C.S., Lau,C.C., Tsang,A.K., Lau,J.H., Bai,R., Teng,J.L., Tsang,C.C., Wang,M., Zheng,B.J., Chan,K.H., Yuen,K.Y., Woo,P.C.Y., Lau,S.K.P., Lam,C.S.F., Lau,C.C.Y., Tsang,A.K.L., Lau,J.H.N., Teng,J.L.L., Tsang,C.C.C., Zheng,B.-J., Chan,K.-H., Yuen,K.-Y. | The University of Hong Kong, Department of Microbiology | China | 2012-03-19 | null | Coronavirus HKU15 | Deltacoronavirus | Coronaviridae | ssRNA(+) | 25,425 | GenBank | 1 | China: Hong Kong | China | Sus scrofa | null | 2010 | null | null | Porcine coronavirus HKU15 strain HKU15-155, complete genome | GACTAAAGATAAAAATTATAGCATTAGTCTATAATTTTATCTCCCTAGCTTCGCTAGTTCTCTACCGACACCAATCCAGGTGCGTCTGCCACCAAGTTGGCTACCCTTTCTAGGGGCGCTTTTGCGCTTGCTCACCATTAGATTACCTGGAAACCAGCCATTCAGGTTGGAGTTTCCCCAGGCTCTTTTGTGTGGGCATTAGCGGCTTGTGGTTTTTGCACAAAATYTAAGCTACTTACCGTTCCTCTGACCATCCACCACTTCTATAGACAGCACTGACTACCGTAGGGTTTAAGTCACACCGGTCTGCACCGCCCGTC... | 97,402 |
PP130097.1 | Porcine deltacoronavirus | Zhou,J., Sun,D. | University | China | 2024-01-24 | HD2023 | Coronavirus HKU15 | Deltacoronavirus | Coronaviridae | ssRNA(+) | 25,402 | GenBank | null | China | China | null | null | null | null | null | Porcine deltacoronavirus isolate HD2023, complete genome | ACATGGGGACTAAAGATAAAAATTATAGCACTAGTCTATAATTTTATCTCCCTAGCTTCGCTAGTTCTCTACCGACACCAATCCAGGTGCGTCTGCCACCAAGTTGGCTACCCTTCCCAGGGGCGCTTTAGCGCTTGCTCACCATTAGATTACCTGGAAACCAGCCATTCAGGTTGGAGTTTCCCCAGGCTCTTTTGTGTGGGCATTAGCGGCTTGTGGTTTTTGCACAAAATTTAAGCTACTTACCGTTCCTCTGGCCATCCACCACTTCTATAGACAGCACTGACTACCGTAGGGTTTAAGTCACACCGGTCTGCACC... | 9,510 |
OR672111.1 | Porcine deltacoronavirus | Su,M., Wang,Y. | Shanxi Agricultural University, School of Animal Medicine | China | 2023-11-19 | CHN-HN-2023 | Coronavirus HKU15 | Deltacoronavirus | Coronaviridae | ssRNA(+) | 25,381 | GenBank | null | China | China | Sus scrofa | null | 2023 | null | null | UNVERIFIED: Porcine deltacoronavirus isolate CHN-HN-2023, complete genome | ACTAAAGATAAAAATTATAGCATTAGTCTATAATTTTATCTCCCTAGCTTCGCTAGTTCTCTACCGACACCAATCCAGGTGCGTCTGCCATCAAGTTGGCTACCCTTCTCAGGGGCGCTTTTGCGCTTGCTCACCATTAGATTACCTGGAAACCAGCCATTCAGGTTGGAGTTTCCCAGGCTCTTTTGTGTGGGCATTAGCGGCTTGTGGTTCTTGCACAAAATCTAAGCTACTTACCGTTCCTCTGACCATCCACCACTTCTATAGACAGCACTGACTACCGTAGGGTTTAAGTCACACCGGTCTGCACCGCCCGTCAG... | 10,812 |
OR762053.1 | Porcine deltacoronavirus | Mingjun,S., Xiaoxu,D. | College of Animal Science and Technology & College of Veterinary Medicine, Zhejiang A&F University | China | 2023-11-13 | ZD2022 | Coronavirus HKU15 | Deltacoronavirus | Coronaviridae | ssRNA(+) | 25,402 | GenBank | null | China | China | Sus scrofa | null | 2022-06 | null | null | Porcine deltacoronavirus isolate ZD2022, complete genome | ACATGGGGACTAAAGATAAAAATTATAGCACTAGTCTATAATTTTATCTCCCTAGCTTCGCTAGTTCTCTACCGACACCAATCCAGGTGCGTCTGCCACCAAGTTGGCTACCCTTCCCAGGGGCGCTTTAGCGCTTGCTCACCATTAGATTACCTGGAAACCAGCCATTCAGGTTGGAGTTTCCCCAGGCTCTTTTGTGTGGGCATTAGCGGCTTGTGGTTTTTGCACAAAATTTAAGCTACTTACCGTTCCTCTGGCCATCCACCACTTCTATAGACAGCACTGACTACCGTAGGGTTTAAGTCACACCGGTCTGCACC... | 11,080 |
OR230676.1 | Porcine deltacoronavirus | Zhang,J., Liu,Z. | Guangdong Academy of Agricultural Sciences, Institute of Animal Health | China | 2023-09-20 | HeN17 | Coronavirus HKU15 | Deltacoronavirus | Coronaviridae | ssRNA(+) | 25,420 | GenBank | null | China | China | Sus scrofa | null | 2017 | null | null | Porcine deltacoronavirus isolate HeN17, complete genome | ACATGGGGACTAAAGATAAAAATTATAGCATTAGTCTATAATTTTATCTCCCTAGCTTCGCTAGTTCTCTACCGACACCAATCCAGGTGCGTCTGCCACCAAGTTGGCTACCCTTTCTAGGGGCGCTTCTGCGCTTGCTCACCATTAGATTACCTGGAAACCAGCCATTCAGGTTGGAGTTTCCCCAGGCTCTTTTGTGTGGGCATTAGCGGCTTGTGGTTTTTGCACAAAATCTAAGCTACTTACCGTTCCTCTGACCATCCACCACTTCTATAGACAGCACTGACTACCGTAGGGTTCAAGTCACACCGGTCTGCACC... | 12,772 |
OP501870.1 | Porcine deltacoronavirus | Guo,Z. | Henan Academy of Agricultural Sciences, Henan Provincial Key Laboratory of Animal Immunology | China | 2023-09-15 | CHN-HeN06-2022 | Coronavirus HKU15 | Deltacoronavirus | Coronaviridae | ssRNA(+) | 25,403 | GenBank | null | China | China | Sus scrofa | null | 2022-05-10 | null | null | Porcine deltacoronavirus isolate CHN-HeN06-2022, complete genome | ACATGGGGACTAAAGATAAAAATTATAGCATTAGTCTATAATTTTATCTCCCTAGCTTCGCTAGTTCTCTACCGACACCAATCCAGGTGCGTCTGCCACCAAGTTGGCTACCCTTCTCAGGGGCGCTTTTGCGCTTGCTCACCATTAGATTACCTGGAAACCAGCCATTCAGGTTGGAGTTTCCCCAGGCTCTTTTGTGTGGGCATTAGCGGCTTGTGGTTTTTGCACAAAATCTAAGCTACTTACCGTTCCTCTGACCATCCACCACTTCTATAGACAGCACTGACTACCGTAGGGTTTAAGTCACACCGGTCTGCACC... | 12,966 |
OQ790128.1 | Porcine deltacoronavirus | Li,K., Luo,R. | Huazhong Agriculture University, College of Animal Sciences and Technology/College of Veterinary Medicine | China | 2023-08-08 | PDCoV-KQ-Swine-2023 | Coronavirus HKU15 | Deltacoronavirus | Coronaviridae | ssRNA(+) | 25,402 | GenBank | null | China | China | Sus scrofa | null | 2023-02-15 | null | null | Porcine deltacoronavirus isolate PDCoV-KQ-Swine-2023, complete genome | ACATGGGGACTAAAGATAAAAATTATAGCATTAGTCTATAATTTTATCTCCCTAGCTTCGCTAGTTCTCTACCGACACCAATCCAGGTGCGTCTGCCACCAAGTTGGCTACCCTTCTTAGGGGCGCTTTTGCGCTTGCTCACCATTAGATTACCTGGAAACCAGCCATTCAGGTTGGAGTTTCCCCAGGCTCTTTTGTGTGGGCATTAGCGACTTGTGGTTTTTGCACAAAATCTAAGCTACTTACCGTTCCTCTGACCATCCACCACTTCTATAGACAGCACTGACTACCGTAGGGTTTAAGTCACACCGGTCTGCACC... | 14,115 |
OQ790129.1 | Porcine deltacoronavirus | Li,K., Luo,R. | Huazhong Agriculture University, College of Animal Sciences and Technology/College of Veterinary Medicine | China | 2023-08-08 | PDCoV-SN-Swine-2018 | Coronavirus HKU15 | Deltacoronavirus | Coronaviridae | ssRNA(+) | 25,389 | GenBank | null | China | China | Sus scrofa | null | 2018-11-03 | null | null | Porcine deltacoronavirus isolate PDCoV-SN-Swine-2018, complete genome | ACATGGGGACTAAAGATAAAAATTATAGCATTAGTCTATAATTTTATCTCCCTAGCTTCGCTAGTTCTCTACCGACACCAATCCAGGTGCGTCTGCCACCAAGTTGGCTACCCTTCCCAGGGGCGCTTTCGCGCTTGCTCACCATTAGATTACCTGGAAACCAGCCATTCAGGTTGGAGTTTCCCCAGGCTCTTTTGTGTGGGCATTAGCGGCTTGTGGTTTTTGCACAAAATCTAAGCTACTTACCGTTCCTCTGACCATCCACCACTTCTATAGACAGCACTGACTACCGTAGGGTTTAAGTCACACCGGTCTGCACC... | 14,116 |
OR269935.1 | Porcine deltacoronavirus | Li,K., Luo,R. | Huazhong Agriculture University, College of Animal Sciences and Technology/College of Veterinary Medicine | China | 2023-07-26 | PDCoV/WH/2023 | Coronavirus HKU15 | Deltacoronavirus | Coronaviridae | ssRNA(+) | 25,402 | GenBank | null | China | China | Sus scrofa | null | 2023-05-15 | null | null | Porcine deltacoronavirus isolate PDCoV/WH/2023, complete genome | ACATGGGGACTAAAGATAAAAATTATAGCATTAGTCTATAATTTTATCTCCCTAGCTTCGCTAGTTCTCTACCGACACCAATCCAGGTGCGTCTGCCACCAAGTTGGCTACCCTTCTTAGGGGCGCTTTTGCGCTTGCTCACCATTAGATTACCTGGAAACCAGCCATTCAGGTTGGAGTTTCCCCAGGCTCTTTTGTGTGGGCATTAGCGACTTGTGGTTTTTGCACAAAATCTAAGCTACTTACCGTTCCTCTGACCATCCACCACTTCTATAGACAGCACTGACTACCGTAGGGTTTAAGTCACACCGGTCTGCACC... | 14,560 |
OQ473581.1 | Porcine deltacoronavirus | Wang,Z., Sun,M., Liang,X., Bai,J., Liu,X., Wang,X., Jiang,P. | Nanjing Agricultural University, College of Veterinary Medicine | China | 2023-07-18 | null | Coronavirus HKU15 | Deltacoronavirus | Coronaviridae | ssRNA(+) | 25,435 | GenBank | null | China | China | Sus scrofa | abdominal cavity | 2022 | null | null | Porcine deltacoronavirus strain JS2021-LX, complete genome | ACATGGGGACTAAAGATAAAAATTATAGCATTAGTCTATAATTGTATCTCCCTAGCTTCGCTAGTTCTCTACCGACACCAATCCAGGTGCGTCTGCCACCAAGTTGGCTACCCTCCCTAGGGGCGCTTTCGCGCTTGCTCACCATTAGATCTACCTGGAAACCAGCCATTCAGGTTGGAGTTTCCCCAGGCTCTTTTGTGTGGGCATTAGCGGCTTGTGGTTTTTGCACAAAATCTAAGCTACTTACCGTTCCTCTGACCATCCACCACTTCTATAGACAGCACTGACTACCGTAGGGTTTAAGTCACACCGGTCTGCAC... | 14,649 |
OR122653.1 | Porcine deltacoronavirus | Zhang,Y., Hu,H. | Henan Agricultural University, Key Laboratory for Animal-Derived Food Safety of Henan Province | null | 2023-07-04 | HNZK-02-P120 | Coronavirus HKU15 | Deltacoronavirus | Coronaviridae | ssRNA(+) | 25,425 | GenBank | null | China | China | Sus scrofa | null | 2021-10-04 | null | null | Porcine deltacoronavirus isolate HNZK-02-P120, complete genome | ACATGGGGACTAAAGATAAAAATTATAGCATTAGTCTATAATTTTATCTCCCTAGCTTCGCTAGTTCTCTACCGACACCAATCCAGGTGCGTCTGCCACCAAGTTGGCTACCCTTTCCAGGGGCGCTTCTGCGCTTGTTCACCATTAGATTACCTGGAAACCAGCCATTCAGGTTGGAGTTTCCCCAGGCTCTTTTGTGTGGGCATTAGCAGCTTGTGGTTTTTGCACAAAATCTAAGCTACTTACCGTTCCTCTGACCATCCACCACTTCTATAGACAGCACTGACTACCGTAGGGTTTAAGTCATACCGGTCTGCACC... | 14,797 |
OR122654.1 | Porcine deltacoronavirus | Zhang,Y., Hu,H. | Henan Agricultural University, Key Laboratory for Animal-Derived Food Safety of Henan Province | null | 2023-07-04 | HNZK-02-P150 | Coronavirus HKU15 | Deltacoronavirus | Coronaviridae | ssRNA(+) | 25,425 | GenBank | null | China | China | Sus scrofa | null | 2022-10-20 | null | null | Porcine deltacoronavirus isolate HNZK-02-P150, complete genome | ACATGGGGGACTAAAGATAAAAATTATACCATTAGTCTATGATTTTATCTCCCTAGCTTCGCTAATTCTCTACCGACACCAATCCAGGTGCGTCTGCCACCAAGTTGGCTACCCTTTCCAGGGGCGCTTCTGCGCTTGTTCACCATTAGATTACCTGGAAACCAGCCATTCAGGTTGGAGTTTCCCCAGGCTCTTTTGTGTGGGCATTAGCAGCTTGTGGTTTTTGCACAAAATCTAAGCTACTTACCGTTCCTCTGACCATCCACCACTTCTATAGACAGCACTGACTACCGTAGGGTTTAAGTCATACCGGTCTGCAC... | 14,798 |
OQ718500.1 | Porcine deltacoronavirus | Kim,H.R., Park,J., Lee,K.K., Jeoung,H.Y., Lyoo,Y.S., Park,S.C., Park,C.K., Kim,H.-R., Lee,K.-K., Park,C.-K. | Kyungpook National University, College of Veterinary Medicine | South Korea | 2023-06-12 | KPDCoV-2201 | Coronavirus HKU15 | Deltacoronavirus | Coronaviridae | ssRNA(+) | 25,422 | GenBank | 1 | South Korea | South Korea | Sus scrofa | null | 2022 | null | null | Porcine deltacoronavirus isolate KPDCoV-2201 ORF1ab polyprotein (ORF1ab), ORF1a polyprotein (ORF1ab), spike protein (S), envelope protein (E), membrane protein (M), nonstructural protein (NS6), nucleocapsid protein (N), and nonstructural protein (NS7) genes, complete cds | ACATGGGGACTAAAGATAAAAATTATAGCATTAGTCTATAATTTTATCTCCCTAGCTTCGCTAGTTCTCTACCGACACCAATCCAGGTGCGTTTGCCACCAAGTTCGCTACCCTTTCTAGGGGCGCTTTCGCGCTTGCTCACCATTAGATAACCTGGAAACCAGCCATTCAGGTTGGAGTTTCCCCAGGCTCTTTTGTGTGGGCATTAGCGGCTTGTGGTTTTTGCACAAAATCTAAGCTACTTACCGTTCCTCTGACCATCCACCACTTCTATAGACAGCACTGATTACCGTAGGGTTTAAGTCACACCGGTCTGCACC... | 15,202 |
OP792038.1 | Porcine deltacoronavirus | Jia,X., Li,J. | Huazhong Agricultural University, College of Veterinary Medicine | China | 2023-05-30 | PDCoV WH-A | Coronavirus HKU15 | Deltacoronavirus | Coronaviridae | ssRNA(+) | 25,424 | GenBank | null | China | China | Sus scrofa | feces | 2020-12 | null | null | UNVERIFIED: Porcine deltacoronavirus isolate PDCoV WH-A, complete genome | ACATGGGGACTAAAGATAAAAATTATAGCATTAGTCTATAATTTTATCTCCCTAGCTTCGCTAGTTCTCTACCGACACCAATCCAGGTGCGTTTGCCACCAAGTTGGCTACCCTTCCCAGGGGCGCTTTCGCGCTTGCTCACCATTTGATTACCTGGAAACCAGCCATTCAGGTTGGAGTTTCCCCAGGCTCTTTTGTGTGGGCATTAGCGGCTTGTGGTTTTTGCACAAAATCTAAGCTACTTACCGTTCCTCTGACCATCCACCACTTCTATAGACAGCACTGACTACCGTAGGGTTTAAGTCACACCGGTCTGCACC... | 15,522 |
OQ736716.1 | Porcine deltacoronavirus | Cheng,Y., Mou,C., Shi,K., Chen,Z. | Yangzhou University, College of Veterinary Medicine | China | 2023-04-19 | PDCoV-GX2022-2 | Coronavirus HKU15 | Deltacoronavirus | Coronaviridae | ssRNA(+) | 25,355 | GenBank | null | China | China | Sus scrofa | null | 2022 | null | null | Porcine deltacoronavirus isolate PDCoV-GX2022-2, complete genome | GCTAGTTCTCTACCGACACCAATCCAGGTGCGTCTGCCACCAAGTTGGCTACCCTTTCTAGGGGCGCTTCTGCGCTTGCTCACCATTAGATTACCTGGAAACCAGCCATTCAGGTTGGAGTTTCCCCAGGCTCTTTTGTGTGGGCATTAGCGGCTTGTGGTTTTTGCACAAAATCTAAGCTACTTACCGTTCCTCTGACCATCCACCACTTCTATAGACAGAACTGACTACCGTAGGGTTCAAGTCACACCGGTCTGCACCGCCCGTCAGCGGACACATTACCCAGCATAGCACTCCTTGCACCGAGCCTAGGTAGGATA... | 16,654 |
OQ736717.1 | Porcine deltacoronavirus | Chch,Y., Mou,C., Shishi,K., Chen,Z. | Yangzhou University, College of Veterinary Medicine | China | 2023-04-19 | PDCoV-GX2022-1 | Coronavirus HKU15 | Deltacoronavirus | Coronaviridae | ssRNA(+) | 25,360 | GenBank | null | China | China | Sus scrofa | null | 2021 | null | null | Porcine deltacoronavirus isolate PDCoV-GX2022-1, complete genome | GCCTGCAGGTCGACGATTCTAGCTTCGCTAGTTCTCTACCGACACCAATCCAGGTGCGTCTGCCACCAAGTTGGCTACCCTTCCCAGGGGCGCTTTCGCGCTTGCTCACCATTAGATTACCTGGAAACCAGCCATTCAGGTTGGAGTTTCCCCAGGCTCTTTTGTGTGGGCATTAGCGGCTTGTGGTTTTTGCACAAAATCTAAGCTACTTATCGTTCCTCTGACCATCCACCACTTCTATAGACAGCACTGACTACCGTAGGGTTTAAGTCACACCGGTCTGCACCGCCCGTCAGCGGACACATTACCCAGCATAGCAC... | 16,655 |
OQ566226.1 | Porcine deltacoronavirus | Lee,D., Jang,G., Lee,C. | Gyeongsang National University, College of Veterinary Medicine and Virus Vaccine Research Center | South Korea | 2023-03-20 | GNU-2105 | Coronavirus HKU15 | Deltacoronavirus | Coronaviridae | ssRNA(+) | 25,422 | GenBank | null | South Korea | South Korea | Sus scrofa | null | 2021 | null | null | Porcine deltacoronavirus isolate GNU-2105, complete genome | ACATGGGGACTAAAGATAAAAATTATAGCATTAGTCTATAATTTTATCTCCCTAGCTTCGCTAGTTCTCTACCGACACCAATCCAGGTGCGTCTGCCACCAAGTTGGCTACCCTTTCTAGGGGCGCTTTCGCGCTTGCTCACCATTAGATTACCTGGAAACCAGCCATTCAGGTTGGAGTTTCCCCAGGCTCTTTTGTGTGGGCATTAGCGGCTTGTGGTTTTTGCACAAAATCTAAGCTACTTACCGTTCCTCTGACCATCCACCACTTCTATAGACAGCACTGATTACCGTAGGGTTTAAGTCACACCGGTCTGCACC... | 17,341 |
OQ566227.1 | Porcine deltacoronavirus | Lee,D., Jang,G., Lee,C. | Gyeongsang National University, College of Veterinary Medicine and Virus Vaccine Research Center | South Korea | 2023-03-20 | GNU-2105-P1 | Coronavirus HKU15 | Deltacoronavirus | Coronaviridae | ssRNA(+) | 25,422 | GenBank | null | South Korea | South Korea | Sus scrofa | null | 2021 | null | null | Porcine deltacoronavirus isolate GNU-2105-P1, complete genome | ACATGGGGACTAAAGATAAAAATTATAGCATTAGTCTATAATTTTATCTCCCTAGCTTCGCTAGTTCTCTACCGACACCAATCCAGGTGCGTCTGCCACCAAGTTGGCTACCCTTTCTAGGGGCGCTTTCGCGCTTGCTCACCATTAGATTACCTGGAAACCAGCCATTCAGGTTGGAGTTTCCCCAGGCTCTTTTGTGTGGGCATTAGCGGCTTGTGGTTTTTGCACAAAATCTAAGCTACTTACCGTTCCTCTGACCATCCACCACTTCTATAGACAGCACTGATTACCGTAGGGTTTAAGTCACACCGGTCTGCACC... | 17,342 |
OQ566228.1 | Porcine deltacoronavirus | Lee,D., Jang,G., Lee,C. | Gyeongsang National University, College of Veterinary Medicine and Virus Vaccine Research Center | South Korea | 2023-03-20 | GNU-2105-P5 | Coronavirus HKU15 | Deltacoronavirus | Coronaviridae | ssRNA(+) | 25,422 | GenBank | null | South Korea | South Korea | Sus scrofa | null | 2021 | null | null | Porcine deltacoronavirus isolate GNU-2105-P5, complete genome | ACATGGGGACTAAAGATAAAAATTATAGCATTAGTCTATAATTTTATCTCCCTAGCTTCGCTAGTTCTCTACCGACACCAATCCAGGTGCGTCTGCCACCAAGTTGGCTACCCTTTCTAGGGGCGCTTTCGCGCTTGCTCACCATTAGATTACCTGGAAACCAGCCATTCAGGTTGGAGTTTCCCCAGGCTCTTTTGTGTGGGCATTAGCGGCTTGTGGTTTTTGCACAAAATCTAAGCTACTTACCGTTCCTCTGACCATCCACCACTTCTATAGACAGCACTGATTACCGTAGGGTTTAAGTCACACCGGTCTGCACC... | 17,343 |
OQ547740.1 | Porcine deltacoronavirus | Pan,S., Cheng,Y., Shi,K., Mou,C., Chen,Z. | Yangzhou University, College of Veterinary Medicine | China | 2023-03-14 | PDCoV-GX2021-1 | Coronavirus HKU15 | Deltacoronavirus | Coronaviridae | ssRNA(+) | 25,422 | GenBank | null | China | China | Sus scrofa | null | 2021 | null | null | Porcine deltacoronavirus isolate PDCoV-GX2021-1, complete genome | ACATGGGGACTAAAGATAAAAATTATAGCATTAGTCTATAATTTTATCTCCCTAGCTTCGCTAGTTCTCTACCGACACCAATCCAGGTGCGTTTGCCACCAAGTTGGCTACCCTTCCTAGGGGCGCTTTCGCGCTTGCTCACCATTAGATTACCTGGAAACCAGCCATTCAGGTTGGAGTTTCCCCAGGCTCTTTTGTGTGGGCATTAGCGGCTTGTGGTTTTTGCACAAAATCTAAGCTACTTACTGTTCCTCTGACCATCCACCACTTCTATAGACAGCACTGATTACCGTAGGGTTTAAGTCACACCGGTCTGCACC... | 17,584 |
OQ551110.1 | Porcine deltacoronavirus | Li,C., Miao,D., Zhou,Z., Wei,X. | Shanghai Academy of Agricultural Sciences, Institute of Animal Husbandry and Veterinary Science | China | 2023-03-14 | CHN-JS-2018 | Coronavirus HKU15 | Deltacoronavirus | Coronaviridae | ssRNA(+) | 25,458 | GenBank | null | China | China | Sus scrofa | null | 2018-02-27 | null | null | Porcine deltacoronavirus strain CHN-JS-2018 complete genome | TAAAGATAAAAATTATAGCATTAGTCTATAATTTTATCTCCCTAGCTTCGCTAGTTCTCTACCGACACCAATCCAGGTGCGTCTGCCACCAAGTTGGCTACCCTTCTCAGGGGCGCTTTTGCGCTTGCTCACCATTAGATTACCTGGAAACCAGCCATTCAGGTTGGAGTTTCCCCAGGCTCTTTTGTGTGGGCATTAGCGGCTTGTGGTTTTTGCACAAAATCTAAGCTACTTACCGTTCCTCTGACCATCCACCACTTCTATAGACAGCACTGACTACCGTAGGGTTTAAGTCACACCGGTCTGCACCGCCCGTCAGC... | 17,585 |
NC_003436.1 | Porcine epidemic diarrhea virus | Kocherhans,R., Bridgen,A., Ackermann,M., Tobler,K., Carvajal,A., Duarte,M., Rasschaert,D., Laude,H. | University of Zurich, Virologisches Institut, Vet. Med. Fak. | Switzerland | 2001-04-23 | null | Porcine epidemic diarrhea virus | Alphacoronavirus | Coronaviridae | ssRNA(+) | 28,033 | RefSeq | 5 | null | null | null | null | null | null | PRJNA485481 | Porcine epidemic diarrhea virus, complete genome | ACTTAAAAAGATTTTCTATCTACGGATAGTTAGCTCTTTTTCTAGACCTTGTCTACTCAATTCAACTAAACAGAAATTTTGTCCTTCCTTCCGGCCGCATGTTCATGCTGCTGGAAGCTGGCGTGGAATTTCATTAGGTTTGCTTAAGTAGCCATCGCAAGTGCTGTGCTGTCCTCTAGTTCCTGGTTGGCGTTCCGTCGCCTTCTACATACTAGACAAACAGCCTTCCTCCGGTTCCGTCTGGGGGTTGTGTGGATAACTAGTTCCGTCTAGTTTGAAACCAGTAACTGCCGGCTATGGCTAGCAACCATGTCACATTG... | 8,658 |
PP107941.1 | Porcine epidemic diarrhea virus | Kim,D.M., Moon,S.H., Kim,S.C., Cho,H.S., Tark,D., Kim,D.-M., Moon,S.-H., Kim,S.-C., Cho,H.-S. | Korea Zoonosis Research Institute, Laboratory for Infectious Disease Prevention | null | 2024-01-30 | CKT-7 p0 | Porcine epidemic diarrhea virus | Alphacoronavirus | Coronaviridae | ssRNA(+) | 28,012 | GenBank | 1 | South Korea | South Korea | Sus scrofa | null | null | null | null | Porcine epidemic diarrhea virus isolate CKT-7 p0, complete genome | GAGATTTTCTATCTACGGATAGTTAGCTCTTTTTCTAGACTCTTGTCTACTCAATTCAACTAAACGAAATTTTGTCCTTCCGGCCGCATGTCCATGCTGCTGGAAGCTGACGTGGAATTTCATTAGGTTTGCTTAAGTAGCCATCGCAAGTGCTGTGCTGTCCTCTAGTTCCTGGTTGGCGTTCCGTCGCCTTCTACATACTAGACAAACAGCCTTCCTCCGGTTCCGTCTGGGGGTTGTGTGGATAACTAGTTCCGTCTAGTTTGAAACCAGTAACTGTCGGCTATGGCTAGCAACCATGTTACATTGGCTTTTGCCAA... | 9,342 |
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