Accession stringlengths 8 11 | Organism_Name stringlengths 10 53 | Submitters stringlengths 4 2.42k ⌀ | Organization stringlengths 3 234 ⌀ | Org_location stringlengths 3 24 ⌀ | Release_Date stringlengths 10 10 | Isolate stringlengths 1 75 ⌀ | Species stringlengths 10 53 ⌀ | Genus stringlengths 7 22 ⌀ | Family stringlengths 10 19 ⌀ | Molecule_type stringclasses 14
values | Length int64 5k 95.4k | Sequence_Type stringclasses 2
values | Publications float64 1 134 ⌀ | Geo_Location stringlengths 3 88 ⌀ | Country stringlengths 3 32 ⌀ | Host stringlengths 3 64 ⌀ | Isolation_Source stringlengths 3 31 ⌀ | Collection_Date stringlengths 4 10 ⌀ | BioSample stringlengths 12 14 ⌀ | BioProject stringlengths 9 23 ⌀ | GenBank_Title stringlengths 22 320 | Sequence stringlengths 5k 95.4k | __index_level_0__ int64 39 112k |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
NC_014397.1 | Rift Valley fever virus | Bird,B.H., Khristova,M.L., Rollin,P.E., Ksiazek,T.G., Nichol,S.T. | National Center for Biotechnology Information, NIH | USA | 2010-08-11 | null | Phlebovirus riftense | Phlebovirus | Phenuiviridae | ssRNA(+/-) | 6,404 | RefSeq | 1 | Egypt: Sharqiya | Egypt | null | blood | 1977 | null | PRJNA485481 | Rift Valley fever virus segment L, complete genome | ACACAAAGGCGCCCAATCATGGATTCTATATTATCAAAACAGCTGGTTGACAAGACTGGTTTTGTTAGAGTGCCAATCAAGCATTTTGACTGTACAATGCTAACTCTGGCACTTCCAACATTTGATGTTTCCAAGATGGTAGATAGAATTACCATAGACTTCAATCTGGATGATATACAAGGAGCATCTGAAATAGGCTCAACTTTGCTACCCTCCATGTCGATAGATGTGGAAGATATGGCCAATTTTGTTCACGATTTCACCTTTGGCCACTTAGCTGACAAGACTGACAGACTGTTAATGCGTGAGTTTCCCATGAT... | 7,565 |
OR972326.1 | Rift Valley fever virus | Kimita,G., Lemtudo,A.P., Awinda,G.O., Mutai,B.K., Waitumbi,J.N. | WRAIR-Africa, Basic Science Laboratory | Kenya | 2023-12-25 | AFI-MGT-989 | Phlebovirus riftense | Phlebovirus | Phenuiviridae | ssRNA(+/-) | 6,397 | GenBank | null | Kenya: Baringo, Marigat, Sintaan | Kenya | Homo sapiens | blood | 2018-07-16 | null | null | Rift Valley fever virus isolate AFI-MGT-989 segment L, complete sequence | CTCAAAGGCGCYCAATCATGGATTCTATATTATCAAAACAACTGGTTGACAAGACTGGTTTTGTTAGAGTGCCAATCAAGCATTATGACTGTACAATGCTAACTCTGGCACTTCCAACATTTGATGTTTCCAAGATGGTAGATAGAATTACCATAGACTTCAATCTGGATGATATACAAGGAGCATCTGAAATAGGTTCAACTTTACTACCCTCCATGTCGATAGATGTGGAAGATATGGCCAATTTTGTTCACGATTTCACCTTTGGCCACTTAGCTGACAAGACTGACAGACTGTTAATGCGTGAGTTTCCCATGATG... | 10,015 |
OP146110.1 | Rift Valley fever virus | Mlingo,T.A.M., Mokoena,N.B., Nthangeni,M.B. | Onderstepoort Biological Products Soc Ltd, Research and Development: Virology | South Africa | 2023-03-29 | null | Phlebovirus riftense | Phlebovirus | Phenuiviridae | ssRNA(+/-) | 6,404 | GenBank | null | South Africa | South Africa | null | null | 1974 | SAMN29826208 | PRJNA756858 | Rift Valley fever virus strain RSA/OBP/RVFV/Inactivated segment L, complete sequence | ACACAAAGGCGCCCAATCATGGATTCTATATTATCAAAACAGCTGGTTGACAAGACTGGTTTTGTTAGAGTGCCAATCAAGCATTATGACTGTACAATGCTAACTCTGGCACTCCCAACATTTGATGTCTCCAAGATGGTAGATAGAATTACTATAGACTTTAATCTGGATGACATACAAGGAGCATCTGAAATAGGCTCAACTTTGCTACCCTCCATGTCGATAGATGTGGAAGATATGGCCAATTTTGTTCACGATTTCACCTTTGGCCACTTAGCTGACAAGACTGACAGACTGTTAATGCGTGAGTTTCCCATGAT... | 16,988 |
ON211622.1 | Rift Valley fever virus | Ikegami,T. | The University of Texas Medical Branch at Galveston, Pathology | USA | 2022-09-25 | null | Phlebovirus riftense | Phlebovirus | Phenuiviridae | ssRNA(+/-) | 6,404 | GenBank | null | USA | USA | null | null | 2020-02-09 | null | null | Rift Valley fever virus strain RVax-1 segment L, complete sequence | ACACAAAGGCGCCCAATCATGGATTCTATATTATCAAAACAGCTGGTGGACAAAACTGGTTTTGTTAGAGTGCCAATCAAGCATTTTGACTGTACAATGCTAACACTTGCACTTCCAACATTTGATGTTTCCAAGATGGTAGATAGAATAACCATTGACTTCAATCTGGATGATATACAAGGAGCATCTGAAATAGGCTCCACTCTTCTACCCTCCATGTCGATAGATGTGGAAGATATGGCCAATTTTGTTCATGACTTCACCTTTGGCCACTTAGCTGACAAGACTGACCGCCTGCTCATGCGTGAGTTTCCCATGAT... | 24,279 |
OM744403.1 | Rift Valley fever virus | Borrego B, Brun A, Borrego,B., Brun,A. | INIA/CSIC, Centro Investigacion Sanidad Animal | Spain | 2022-07-16 | 40Fp8 | Phlebovirus riftense | Phlebovirus | Phenuiviridae | ssRNA(+/-) | 6,404 | GenBank | 1 | Spain | Spain | null | null | 2016-06-21 | null | null | Rift Valley fever virus isolate 40Fp8 segment L, complete sequence | ACACAAAGGCGCCCAATCATGGATTCTATATTATCAAAACAGCTGGTTGACAAGACTGGTTTTGTTAGAGTGCCAATCAAGCATTATGACTGTACAATGCTAACTCTGGCACTCCCAACATTTGATGTCTCCAAGATGGTAGATAGAATTACCATAGACTTCAATTTAGACGACATACAAGGAGCATCTGAAATAGGTTCAACTTTGCTACCCTCTATGTCGATAGATGTGGAAGATATGGCCAATTTTGTTCACGATTTCACCTTTGGCCACTTAGCTGACAAGACTGACAGACTCTTAATGCGTGAGTTTCCCACGAT... | 28,805 |
OM744375.1 | Rift Valley fever virus | Juma,J.A., Fonseca,V., Limbaso,S.K., Heusden,P.V., Nyamota,R., Roesel,K., Sang,R., Christoffels,A., Oliveira,T.D., Bett,B., Oyola,S.O. | International Livestock Research Institute, Animal and Human Health | Kenya | 2022-03-20 | null | Phlebovirus riftense | Phlebovirus | Phenuiviridae | ssRNA(+/-) | 6,397 | GenBank | null | Kenya: Kiambu | Kenya | Bos taurus | null | 2021-07-15 | null | null | Rift Valley fever virus strain DVS-230 segment L, complete sequence | AAGGCGCCCAATCATGGATTCTATATTATCAAAACAACTGGTTGACAAGACTGGTTTTGTTAGAGTGCCAATCAAGCATTATGACTGTACAATGCTAACTCTGGCACTTCCAACATTTGATGTTTCCAAGATGGTAGATAGAATTACCATAGACTTCAATCTGGATGATATACAAGGAGCATCTGAAATAGGTTCAACTTTACTACCCTCCATGTCGATAGATGTGGAAGATATGGCCAATTTTGTTCACGATTTCACCTTTGGCCACTTAGCTGACAAGACTGACAGACTGTTAATGCGTGAGTTTCCCATGATGAATG... | 32,351 |
OM744376.1 | Rift Valley fever virus | Juma,J.A., Fonseca,V., Limbaso,S.K., Heusden,P.V., Nyamota,R., Roesel,K., Sang,R., Christoffels,A., Oliveira,T.D., Bett,B., Oyola,S.O. | International Livestock Research Institute, Animal and Human Health | Kenya | 2022-03-20 | null | Phlebovirus riftense | Phlebovirus | Phenuiviridae | ssRNA(+/-) | 6,399 | GenBank | null | Kenya: Kiambu | Kenya | Bos taurus | null | 2021-07-15 | null | null | Rift Valley fever virus strain DVS-321 segment L, complete sequence | CAAAGGCGCCCAATCATGGATTCTATATTATCAAAACAACTGGTTGACAAGACTGGTTTTGTTAGAGTGCCAATCAAGCATTATGACTGTACAATGCTAACTCTGGCACTTCCAACATTTGATGTTTCCAAGATGGTAGATAGAATTACCATAGACTTCAATCTGGATGATATACAAGGAGCATCTGAAATAGGTTCAACTTTACTACCCTCCATGTCGATAGATGTGGAAGATATGGCCAATTTTGTTCACGATTTCACCTTTGGCCACTTAGCTGACAAGACTGACAGACTGTTAATGCGTGAGTTTCCCATGATGAA... | 32,352 |
OM744377.1 | Rift Valley fever virus | Juma,J.A., Fonseca,V., Limbaso,S.K., Heusden,P.V., Nyamota,R., Roesel,K., Sang,R., Christoffels,A., Oliveira,T.D., Bett,B., Oyola,S.O. | International Livestock Research Institute, Animal and Human Health | Kenya | 2022-03-20 | null | Phlebovirus riftense | Phlebovirus | Phenuiviridae | ssRNA(+/-) | 6,397 | GenBank | null | Kenya: Kiambu | Kenya | Bos taurus | null | 2021-07-15 | null | null | Rift Valley fever virus strain DVS-333 segment L, complete sequence | AAGGCGCCCAATCATGGATTCTATATTATCAAAACAACTGGTTGACAAGACTGGTTTTGTTAGAGTGCCAATCAAGCATTATGACTGTACAATGCTAACTCTGGCACTTCCAACATTTGATGTTTCCAAGATGGTAGATAGAATTACCATAGACTTCAATCTGGATGATATACAAGGAGCATCTGAAATAGGTTCAACTTTACTACCCTCCATGTCGATAGATGTGGAAGATATGGCCAATTTTGTTCACGATTTCACCTTTGGCCACTTAGCTGACAAGACTGACAGACTGTTAATGCGTGAGTTTCCCATGATGAATG... | 32,353 |
OM744378.1 | Rift Valley fever virus | Juma,J.A., Fonseca,V., Limbaso,S.K., Heusden,P.V., Nyamota,R., Roesel,K., Sang,R., Christoffels,A., Oliveira,T.D., Bett,B., Oyola,S.O. | International Livestock Research Institute, Animal and Human Health | Kenya | 2022-03-20 | null | Phlebovirus riftense | Phlebovirus | Phenuiviridae | ssRNA(+/-) | 6,396 | GenBank | null | Kenya: Kiambu | Kenya | Bos taurus | null | 2021-07-15 | null | null | Rift Valley fever virus strain DVS-356 segment L, complete sequence | AGGCGCCCAATCATGGATTCTATATTATCAAAACAACTGGTTGACAAGACTGGTTTTGTTAGAGTGCCAATCAAGCATTATGACTGTACAATGCTAACTCTGGCACTTCCAACATTTGATGTTTCCAAGATGGTAGATAGAATTACCATAGACTTCAATCTGGATGATATACAAGGAGCATCTGAAATAGGTTCAACTTTACTACCCTCCATGTCGATAGATGTGGAAGATATGGCCAATTTTGTTCACGATTTCACCTTTGGCCACTTAGCTGACAAGACTGACAGACTGTTAATGCGTGAGTTTCCCATGATGAATGA... | 32,354 |
OM744379.1 | Rift Valley fever virus | Juma,J.A., Fonseca,V., Limbaso,S.K., Heusden,P.V., Nyamota,R., Roesel,K., Sang,R., Christoffels,A., Oliveira,T.D., Bett,B., Oyola,S.O. | International Livestock Research Institute, Animal and Human Health | Kenya | 2022-03-20 | null | Phlebovirus riftense | Phlebovirus | Phenuiviridae | ssRNA(+/-) | 6,400 | GenBank | null | Kenya: Kiambu | Kenya | Bos taurus | null | 2021-07-15 | null | null | Rift Valley fever virus strain DVS-372 segment L, complete sequence | CAAAGGCGCCCAATCATGGATTCTATATTATCAAAACAACTGGTTGACAAGACTGGTTTTGTTAGAGTGCCAATCAAGCATTATGACTGTACAATGCTAACTCTGGCACTTCCAACATTTGATGTTTCCAAGATGGTAGATAGAATTACCATAGACTTCAATCTGGATGATATACAAGGAGCATCTGAAATAGGTTCAACTTTACTACCCTCCATGTCGATAGATGTGGAAGATATGGCCAATTTTGTTCACGATTTCACCTTTGGCCACTTAGCTGACAAGACTGACAGACTGTTAATGCGTGAGTTTCCCATGATGAA... | 32,355 |
KY126665.1 | Rift Valley fever virus | Grobbelaar,A.A., Weyer,J., Janse van Vuuren,P., Paweska,J.T. | National Institute for Communicable Diseases, Centre for Emerging and Zoonotic Diseases | South Africa | 2020-11-13 | SPU105/10 | Phlebovirus riftense | Phlebovirus | Phenuiviridae | ssRNA(+/-) | 6,404 | GenBank | null | South Africa | South Africa | Homo sapiens | null | 2010 | null | null | Rift Valley fever virus isolate SPU105/10 segment L, complete sequence | ACACAAAGGCGCCCAATCATGGATTCTATATTATCAAAACAGCTGGTTGACAAGACTGGTTTTGTTAGAGTGCCAATCAAGCATTATGACTGTACAATGCTGACTCTGGCACTTCCAACATTTGATGTTTCCAAGATGGTAGATAGGATCACCATTGACTTCAATCTGGATGATATACAAGGAGCATCTGAAATAGGCTCAACTTTGCTACCCTCCATGTCGATAGATGTGGAAGATATGGCCAATTTTGTTCACGATTTCACCTTTGGCCACTTAGCTGACAAGACTGACAGACTGTTAATGCGTGAGTTTCCCATGAT... | 45,844 |
KY126666.1 | Rift Valley fever virus | Grobbelaar,A.A., Weyer,J., Janse van Vuuren,P., Paweska,J.T. | National Institute for Communicable Diseases, Centre for Emerging and Zoonotic Diseases | South Africa | 2020-11-13 | SA129/10 | Phlebovirus riftense | Phlebovirus | Phenuiviridae | ssRNA(+/-) | 6,404 | GenBank | null | South Africa | South Africa | Homo sapiens | null | 2010 | null | null | Rift Valley fever virus isolate SA129/10 segment L, complete sequence | ACACAAAGGCGCCCAATCATGGATTCTATATTATCAAAACAGCTGGTTGACAAGACTGGTTTTGTTAGAGTGCCAATCAAGCATTATGACTGTACAATGCTGACTCTGGCACTTCCAACATTTGATGTTTCCAAGATGGTAGATAGGATCACCATTGACTTCAATCTGGATGATATACAAGGAGCATCTGAAATAGGCTCAACTTTGCTACCCTCCATGTCGATAGATGTGGAAGATATGGCCAATTTTGTTCACGATTTCACCTTTGGCCACTTAGCTGACAAGACTGACAGACTGTTAATGCGTGAGTTTCCCATGAT... | 45,845 |
KY126667.1 | Rift Valley fever virus | Grobbelaar,A.A., Weyer,J., Janse van Vuuren,P., Paweska,J.T. | National Institute for Communicable Diseases, Centre for Emerging and Zoonotic Diseases | South Africa | 2020-11-13 | SPU162/10 | Phlebovirus riftense | Phlebovirus | Phenuiviridae | ssRNA(+/-) | 6,404 | GenBank | null | South Africa | South Africa | Homo sapiens | null | 2010 | null | null | Rift Valley fever virus isolate SPU162/10 segment L, complete sequence | ACACAAAGGCGCCCAATCATGGATTCTATATTATCAAAACAGCTGGTTGACAAGACTGGTTTTGTTAGAGTGCCAATCAAGCATTATGACTGTACAATGCTGACTCTGGCACTTCCAACATTTGATGTTTCCAAGATGGTAGATAGGATCACCATTGACTTCAATCTGGATGATATACAAGGAGCATCTGAAATAGGCTCAACTTTGCTACCCTCCATGTCGATAGATGTGGAAGATATGGCCAATTTTGTTCACGATTTCACCTTTGGCCACTTAGCTGACAAGACTGACAGACTGTTAATGCGTGAGTTTCCCATGAT... | 45,846 |
KY126668.1 | Rift Valley fever virus | Grobbelaar,A.A., Weyer,J., Janse van Vuuren,P., Paweska,J.T. | National Institute for Communicable Diseases, Centre for Emerging and Zoonotic Diseases | South Africa | 2020-11-13 | SA184/10 | Phlebovirus riftense | Phlebovirus | Phenuiviridae | ssRNA(+/-) | 6,404 | GenBank | null | South Africa | South Africa | Homo sapiens | null | 2010 | null | null | Rift Valley fever virus isolate SA184/10 segment L, complete sequence | ACACAAAGGCGCCCAATCATGGATTCTATATTATCAAAACAGCTGGTTGACAAGACTGGTTTTGTTAGAGTGCCAATCAAGCATTATGACTGTACAATGCTAACTCTAGCACTTCCAACATTTGATGTCTCCAAGATGGTAGATAGAATTGCCATAGACTTCAATCTGGACGACATACAAGGAGCATCTGAAATAGGCTCAACTTTGCTACCCTCCATGTCAATAGATGTGGAAGACATGGCTAATTTTGTTCACGATTTCACCTTTGGCCACTTAGCTGACAAGACTGACAGACTGTTAATGCGTGAGTTTCCCATGAT... | 45,847 |
KY126669.1 | Rift Valley fever virus | Grobbelaar,A.A., Weyer,J., Janse van Vuuren,P., Paweska,J.T. | National Institute for Communicable Diseases, Centre for Emerging and Zoonotic Diseases | South Africa | 2020-11-13 | SA275/10 | Phlebovirus riftense | Phlebovirus | Phenuiviridae | ssRNA(+/-) | 6,404 | GenBank | null | South Africa | South Africa | Homo sapiens | null | 2010 | null | null | Rift Valley fever virus isolate SA275/10 segment L, complete sequence | ACACAAAGGCGCCCAATCATGGATTCTATATTATCAAAACAGCTGGTTGACAAGACTGGTTTTGTTAGAGTGCCAATCAAGCATTATGACTGTACAATGCTGACTCTGGCACTTCCAACATTTGATGTTTCCAAGATGGTAGATAGGATCACCATTGACTTCAATCTGGATGATATACAAGGAGCATCTGAAATAGGCTCAACTTTGCTACCCTCCATGTCGATAGATGTGGAAGATATGGCCAATTTTGTTCACGATTTCACCTTTGGCCACTTAGCTGACAAGACTGACAGACTGTTAATGCGTGAGTTTCCCATGAT... | 45,848 |
KY126670.1 | Rift Valley fever virus | Grobbelaar,A.A., Weyer,J., Janse van Vuuren,P., Paweska,J.T. | National Institute for Communicable Diseases, Centre for Emerging and Zoonotic Diseases | South Africa | 2020-11-13 | SA276/10 | Phlebovirus riftense | Phlebovirus | Phenuiviridae | ssRNA(+/-) | 6,404 | GenBank | null | South Africa | South Africa | Homo sapiens | null | 2010 | null | null | Rift Valley fever virus isolate SA276/10 segment L, complete sequence | ACACAAAGGCGCCCAATCATGGATTCTATATTATCAAAACAGCTGGTTGACAAGACTGGTTTTGTTAGAGTGCCAATCAAGCATTATGACTGTACAATGCTGACTCTGGCACTTCCAACATTTGATGTTTCCAAGATGGTAGATAGGATCACCATTGACTTCAATCTGGATGATATACAAGGAGCATCTGAAATAGGCTCAACTTTGCTACCCTCCATGTCGATAGATGTGGAAGATATGGCCAATTTTGTTCACGATTTCACCTTTGGCCACTTAGCTGACAAGACTGACAGACTGTTAATGCGTGAGTTTCCCATGAT... | 45,849 |
KY126671.1 | Rift Valley fever virus | Grobbelaar,A.A., Weyer,J., Janse van Vuuren,P., Paweska,J.T. | National Institute for Communicable Diseases, Centre for Emerging and Zoonotic Diseases | South Africa | 2020-11-13 | SA573/10 | Phlebovirus riftense | Phlebovirus | Phenuiviridae | ssRNA(+/-) | 6,404 | GenBank | null | South Africa | South Africa | Homo sapiens | null | 2010 | null | null | Rift Valley fever virus isolate SA573/10 segment L, complete sequence | ACACAAAGGCGCCCAATCATGGATTCTATATTATCAAAACAGCTGGTTGACAAGACTGGTTTTGTTAGAGTGCCAATCAAGCATTATGACTGTACAATGCTGACTCTGGCACTTCCAACATTTGATGTTTCCAAGATGGTAGATAGGATCACCATTGACTTCAATCTGGATGATATACAAGGAGCATCTGAAATAGGCTCAACTTTGCTACCCTCCATGTCGATAGATGTGGAAGATATGGCCAATTTTGTTCACGATTTCACCTTTGGCCACTTAGCTGACAAGACTGACAGACTGTTAATGCGTGAGTTTCCCATGAT... | 45,850 |
KY126672.1 | Rift Valley fever virus | Grobbelaar,A.A., Weyer,J., Janse van Vuuren,P., Paweska,J.T. | National Institute for Communicable Diseases, Centre for Emerging and Zoonotic Diseases | South Africa | 2020-11-13 | SA982/10 | Phlebovirus riftense | Phlebovirus | Phenuiviridae | ssRNA(+/-) | 6,404 | GenBank | null | South Africa | South Africa | Homo sapiens | null | 2010 | null | null | Rift Valley fever virus isolate SA982/10 segment L, complete sequence | ACACAAAGGCGCCCAATCATGGATTCTATATTATCAAAACAGCTGGTTGACAAGACTGGTTTTGTTAGAGTGCCAATCAAGCATTATGACTGTACAATGCTGACTCTGGCACTTCCAACATTTGATGTTTCCAAGATGGTAGATAGGATCACCATTGACTTCAATCTGGATGATATACAAGGAGCATCTGAAATAGGCTCAACTTTGCTACCCTCCATGTCGATAGATGTGGAAGATATGGCCAATTTTGTTCACGATTTCACCTTTGGCCACTTAGCTGACAAGACTGACAGACTGTTAATGCGTGAGTTTCCCATGAT... | 45,851 |
KY126673.1 | Rift Valley fever virus | Grobbelaar,A.A., Weyer,J., Janse van Vuuren,P., Paweska,J.T. | National Institute for Communicable Diseases, Centre for Emerging and Zoonotic Diseases | South Africa | 2020-11-13 | SA1094/10 | Phlebovirus riftense | Phlebovirus | Phenuiviridae | ssRNA(+/-) | 6,404 | GenBank | null | South Africa | South Africa | Homo sapiens | null | 2010 | null | null | Rift Valley fever virus isolate SA1094/10 segment L, complete sequence | ACACAAAGGCGCCCAATCATGGATTCTATATTATCAAAACAGCTGGTTGACAAGACTGGTTTTGTTAGAGTGCCAATCAAGCATTATGACTGTACAATGCTGACTCTGGCACTTCCAACATTTGATGTTTCCAAGATGGTAGATAGGATCACCATTGACTTCAATCTGGATGATATACAAGGAGCATCTGAAATAGGCTCAACTTTGCTACCCTCCATGTCAATAGATGTGGAAGATATGGCCAATTTTGTTCACGATTTCACCTTTGGCCACTTAGCTGACAAGACTGACAGACTGTTAATGCGTGAGTTTCCCATGAT... | 45,852 |
KY126674.1 | Rift Valley fever virus | Grobbelaar,A.A., Weyer,J., Janse van Vuuren,P., Paweska,J.T. | National Institute for Communicable Diseases, Centre for Emerging and Zoonotic Diseases | South Africa | 2020-11-13 | SA1222/10 | Phlebovirus riftense | Phlebovirus | Phenuiviridae | ssRNA(+/-) | 6,404 | GenBank | null | South Africa | South Africa | Homo sapiens | null | 2010 | null | null | Rift Valley fever virus isolate SA1222/10 segment L, complete sequence | ACACAAAGGCGCCCAATCATGGATTCTATATTATCAAAACAGCTGGTTGACAAGACTGGTTTTGTTAGAGTGCCAATCAAGCATTATGACTGTACAATGCTGACTCTGGCACTTCCAACATTTGATGTTTCCAAGATGGTAGATAGGATCACCATTGACTTCAATCTGGATGATATACAAGGAGCATCTGAAATAGGCTCAACTTTGCTACCCTCCATGTCGATAGATGTGGAAGATATGGCCAATTTTGTTCACGATTTCACCTTTGGCCACTTAGCTGACAAGACTGACAGACTGTTAATGCGTGAGTTTCCCATGAT... | 45,853 |
MW915463.1 | Rinderpest morbillivirus | Libeau,G., Koual,R., Kwiatek,O., Bataille,A. | CIRAD, Bios | France | 2022-02-10 | null | Morbillivirus pecoris | Morbillivirus | Paramyxoviridae | ssRNA(-) | 15,882 | GenBank | null | null | null | Bos taurus | null | 1986 | null | null | Rinderpest morbillivirus strain RBOK/BK98, complete genome | ACCAGACAAAGCTGGGTAAGGATCGTTCTATCAATGATTGTGATTTAGCACACTTAGGATTCAAGATCCTATCGACTGGAGCAGGCTTAGGGCACAGGTTCTTTAAAATGGCTTCTCTCTTGAAGAGCTTAGCTCTGTTCAAAAGGGCCAAAGACAAGCCACCCCTTGCTGCAGGCTCTGGTGGGGCTATCCGGGGAATCAAACATGTCATTGTTGTTCCGATTCCTGGGGATTCCTCAATCACCACAAGATCCCGCCTCCTAGACCGTCTCGTTAAAATGGTGGGAGACCCAGACATCAGTGGCCCTAAATTAACCGGG... | 32,973 |
MN632552.1 | Rinderpest morbillivirus | King,S., Rajko-Nenow,P., Ropiak,H.M., Ribeca,P., Batten,C., Baron,M.D., Ropiak,H. | The Pirbright Institute | null | 2020-04-27 | RPV001 | Morbillivirus pecoris | Morbillivirus | Paramyxoviridae | ssRNA(-) | 15,882 | GenBank | 1 | Saudi Arabia | Saudi Arabia | Bos taurus | null | 1981 | null | null | Rinderpest morbillivirus strain Saudi/81 isolate RPV001, complete genome | ACCAAACAAAGCTGGGTAAGGATAGGTATACCAATAATTGTGATTTAGTACACTTAGGATTCAAGATCCTATCGACTGGAGCAGGCTTAAGGCAAAGGTTCTTTAAAATGGCTTCTCTCCTGAAGAGTTTAGCCCTGTTCAGAAAGAACAAGGACAAGCCACCCCTTGCTGCAGGTTCTGGTGGTGCTATCCGGGGAATTAAACATGTCATTATTGTTCCGATCCCTGGAGACTCCTCAATCACCACAAGATCACGTCTTCTAGATCGTCTCGTCAAAATGGTGGGGGACCCTGATATCAGTGGCCCTAAACTAACCGGA... | 50,932 |
MN632553.1 | Rinderpest morbillivirus | King,S., Rajko-Nenow,P., Ropiak,H.M., Ribeca,P., Batten,C., Baron,M.D., Ropiak,H. | The Pirbright Institute | null | 2020-04-27 | RPV006 | Morbillivirus pecoris | Morbillivirus | Paramyxoviridae | ssRNA(-) | 15,882 | GenBank | 1 | Kenya | Kenya | Giraffa camelopardalis | null | 1962 | null | null | Rinderpest morbillivirus strain Kenya/62/RGK1 isolate RPV006, complete genome | ACCAAACAAAGTTGGGTAAGGATAGGTATATCAATAATTATGGCTTAGTACACTTAGGATTCAAGATCCTACCGACCGGAGCAGGACTAGGGGAAAGGTTTTTTAAAATGGCTTCTCTCTTGAAGAGCTTGGCCCTGTTCAAGAAGAACAAAGACAAGCCACCTCTTGCTGCAGGTTCTGGTGGTGCTATCCGGGGAATCAAACATGTCATCGTTGTTCCGATCCCGGGAGATTCCTCAATCACCACAAGATCACGCCTTCTGGACCGTCTTGTTAAAATGGTAGGGGACCCAGACATCAGTGGTCCTAAATTAACCGGG... | 50,933 |
MN632554.1 | Rinderpest morbillivirus | King,S., Rajko-Nenow,P., Ropiak,H.M., Ribeca,P., Batten,C., Baron,M.D., Ropiak,H. | The Pirbright Institute | null | 2020-04-27 | RPV007 | Morbillivirus pecoris | Morbillivirus | Paramyxoviridae | ssRNA(-) | 15,882 | GenBank | 1 | null | null | Capra hircus | null | null | null | null | Rinderpest morbillivirus strain GtVacc/KAG isolate RPV007, complete genome | ACCAAACAAAGTTGGGTATGGATAGGTATATCAATAATTATGATTTAGTACACTTAGGATTCAAGATCCTATCGACTGGACCAGGCTTAAGGCAAAGGTTCTTTAAAATGGCTTCTCTCCTGAAGAGCTTAGCCTTATTCAAAAAGAACAAGGACAAGCCACCCCTTGCTGCAGGCTCTGGTGGTGCTATCCGGGGAATTAAACATGTCATCATTGTTCCGATCCCTGGAGATTCTTCAATCACCACAAGGTCACGCCTTCTGGATCGTCTCGTCAAGATGGTGGGGGACCCAGATATCAGTGGCCCTAAATTAACCGGA... | 50,934 |
MN632555.1 | Rinderpest morbillivirus | King,S., Rajko-Nenow,P., Ropiak,H.M., Ribeca,P., Batten,C., Baron,M.D., Ropiak,H. | The Pirbright Institute | null | 2020-04-27 | RPV009 | Morbillivirus pecoris | Morbillivirus | Paramyxoviridae | ssRNA(-) | 15,882 | GenBank | 1 | Nigeria | Nigeria | Bos taurus | null | 1983 | null | null | Rinderpest morbillivirus strain Nigeria/Yankari/buffalo/83 isolate RPV009, complete genome | ACCAAACAAAGTTGGGTAAGGATAGGTATATTAATAATTATGACTTAATACACTTAGGATTCAAGATCCTATCGACTGGAGCAGGCTTAAGGTAAAGGTTCTTTAAGATGGCTTCTCTCCTGAAGAGCTTAGCCCTGTTCAAAAGGAACAAAGACAAGCCGCCTCTTGCTGCAGGTTCTGGTGGTGCTATCCGGGGAATCAAACATGTCATCGTTGTTCCGATCCCGGGAGATTCCTCAATCACCACAAGATCACGCCTTCTGGACCGTCTTGTTAAAATGGTAGGGGACCCAGACATCAGTGGTCCTAAATTAACCGGG... | 50,935 |
MN632556.1 | Rinderpest morbillivirus | King,S., Rajko-Nenow,P., Ropiak,H.M., Ribeca,P., Batten,C., Baron,M.D., Ropiak,H. | The Pirbright Institute | null | 2020-04-27 | RPV011 | Morbillivirus pecoris | Morbillivirus | Paramyxoviridae | ssRNA(-) | 15,882 | GenBank | 1 | Sri Lanka | Sri Lanka | Bos taurus | null | 1987 | null | null | Rinderpest morbillivirus strain SriLanka/87 isolate RPV011, complete genome | ACCAAACAAAGTTGGGTAAGGATAGGTATATAAATAATTGTGATTTAGTACACTTAGGATTCAAGATCCTATCGACTGGAGCAGGTTTAAGGCAAAGATTCTTTAAAATGGCTTCTCTCCTGAAGAGCCTAGCCCTATTCAAAAAGAACAAGGACAAGCCACCCCTTGCTGCAGGCTCTGGTGGTGCTATCCGGGGAATTAAACATGTCATTATTGTTCCGATCCCTGGAGATTCCTCAATCACCACAAGATCACGCCTTCTAGATCGTCTCGTCAAAATGGTGGGGGATCCTGATATCAGTGGCCCTAAACTAACCGGA... | 50,936 |
MN632557.1 | Rinderpest morbillivirus | King,S., Rajko-Nenow,P., Ropiak,H.M., Ribeca,P., Batten,C., Baron,M.D., Ropiak,H. | The Pirbright Institute | null | 2020-04-27 | RPV014 | Morbillivirus pecoris | Morbillivirus | Paramyxoviridae | ssRNA(-) | 15,882 | GenBank | 1 | Egypt | Egypt | Bos taurus | null | 1984 | null | null | Rinderpest morbillivirus strain Egypt/84 isolate RPV014, complete genome | ACCAAACAAAGTTGGGTAAGGATAGGTATATTAGTAATTATGACTTAATACACTTAGGATTCAAGATCCTATCGACTGGAGCAGGCTTAAGGTAAAGGTTCTTTAAGATGGCTTCTCTCCTGAAGAGCTTAGCCCTGTTCAAAAGGAACAAAGACAAGCCGCCTCTTGCTGCAGGTTCTGGTGGTGCTATCCGGGGAATCAAACATGTCATCGTTGTTCCGATCCCGGGAGATTCCTCAATCACCACAAGATCACGCCTTCTGGACCGTCTTGTTAAAATGGTAGGGGACCCAGACATCAGTGGTCCTAAATTAACCGGG... | 50,937 |
MN632558.1 | Rinderpest morbillivirus | King,S., Rajko-Nenow,P., Ropiak,H.M., Ribeca,P., Batten,C., Baron,M.D., Ropiak,H. | The Pirbright Institute | null | 2020-04-27 | RPV015 | Morbillivirus pecoris | Morbillivirus | Paramyxoviridae | ssRNA(-) | 15,882 | GenBank | 1 | Lebanon | Lebanon | Bos taurus | null | 1982 | null | null | Rinderpest morbillivirus strain Lebanon/82 isolate RPV015, complete genome | ACCAAACAAAGTTGGGTAAGGATAGGTATACCAATAATTGTGATTTAGTACACTTAGGATTCAAGATCCTATCGACTGGAGCAGGCTTAAGGCAAAGGTTCTTTAAAATGGCTTCTCTCCTGAAGAGTTTAGCCCTGTTCAAAAAGAACAAGGACAAGCCACCCCTTGCTGCAGGTTCTGGTGGTGCTATCCGGGGAATTAAACATGTCATTATTGTTCCGATCCCTGGAGACTCCTCAATCACCACAAGATCACGTCTTCTAGATCGTCTCGTCAAAATGGTGGGGGACCCTGATATCAGTGGCCCTAAACTAACCGGA... | 50,938 |
MN632559.1 | Rinderpest morbillivirus | King,S., Rajko-Nenow,P., Ropiak,H.M., Ribeca,P., Batten,C., Baron,M.D., Ropiak,H. | The Pirbright Institute | null | 2020-04-27 | RPV017 | Morbillivirus pecoris | Morbillivirus | Paramyxoviridae | ssRNA(-) | 15,882 | GenBank | 1 | Oman | Oman | Bos taurus | null | 1979 | null | null | Rinderpest morbillivirus strain Oman/79 isolate RPV017, complete genome | ACCAAACAAAGCTGGGTAAGGATAGGTATACCAATAATTGTGATTTAGTACACTTAGGATTCAAGATCCTATCGACTGGAGCAGGCTTAAGGCAAAGGTTCTTTAAAATGGCTTCTCTCCTGAAGAGTTTAGCCCTGTTCAAAAAGAACAAGGACAAGCCACCCCTTGCTGCAGGTTCTGGTGGTGCTATCCGGGGAATTAAACATGTCATTATTGTTCCGATCCCTGGAGACTCCTCAATCACCACAAGATCACGTCTTCTAGATCGTCTCGTCAAAATGGTGGGGGACCCTGATATCAGTGGCCCTAAACTAACCGGA... | 50,939 |
MN632560.1 | Rinderpest morbillivirus | King,S., Rajko-Nenow,P., Ropiak,H.M., Ribeca,P., Batten,C., Baron,M.D., Ropiak,H. | The Pirbright Institute | null | 2020-04-27 | RPV018 | Morbillivirus pecoris | Morbillivirus | Paramyxoviridae | ssRNA(-) | 15,882 | GenBank | 1 | Saudi Arabia | Saudi Arabia | Bos taurus | spleen, abdominal cavity | 1981 | null | null | Rinderpest morbillivirus strain Saudi/81 isolate RPV018, complete genome | ACCAAACAAAGYTGGGTAAGGATAGGTATACCAATAATTGTGATTTAGTACACTTAGGATTCAAGATCCTATCGACTGGAGCAGGCTTAAGGCAAAGGTTCTTTAAAATGGCTTCTCTCCTGAAGAGTTTAGCCCTGTTCAGAAAGAACAAGGACAAGCCACCCCTTGCTGCAGGTTCTGGTGGTGCTATCCGGGGAATTAAACATGTCATTATTGTTCCGATCCCTGGAGACTCCTCAATCACCACAAGATCACGTCTTCTAGATCGTCTCGTCAAAATGGTGGGGGACCCTGATATCAGTGGCCCTAAACTAACCGGA... | 50,940 |
MN632561.1 | Rinderpest morbillivirus | King,S., Rajko-Nenow,P., Ropiak,H.M., Ribeca,P., Batten,C., Baron,M.D., Ropiak,H. | The Pirbright Institute | null | 2020-04-27 | RPV019 | Morbillivirus pecoris | Morbillivirus | Paramyxoviridae | ssRNA(-) | 15,882 | GenBank | 1 | Saudi Arabia | Saudi Arabia | Bos taurus | lymph | 1981 | null | null | Rinderpest morbillivirus strain Saudi/81 isolate RPV019, complete genome | ACCAAACAAAGYTGGGTAAGGATAGGTATACCAATAATTGTGATTTAGTACACTTAGGATTCAAGATCCTATCGACTGGAGCAGGCTTAAGGCAAAGGTTCTTTAAAATGGCTTCTCTCCTGAAGAGTTTAGCCCTGTTCAGAAAGAACAAGGACAAGCCACCCCTTGCTGCAGGTTCTGGTGGTGCTATCCGGGGAATTAAACATGTCATTATTGTTCCGATCCCTGGAGACTCCTCAATCACCACAAGATCACGTCTTCTAGATCGTCTCGTCAAAATGGTGGGGGACCCTGATATCAGTGGCCCTAAACTAACCGGA... | 50,941 |
MN632562.1 | Rinderpest morbillivirus | King,S., Rajko-Nenow,P., Ropiak,H.M., Ribeca,P., Batten,C., Baron,M.D., Ropiak,H. | The Pirbright Institute | null | 2020-04-27 | RPV022 | Morbillivirus pecoris | Morbillivirus | Paramyxoviridae | ssRNA(-) | 15,882 | GenBank | 1 | Sudan | Sudan | Bos taurus | null | 1993 | null | null | Rinderpest morbillivirus strain Sudan/93/RBsS isolate RPV022, complete genome | ACCAAACAAAGTTGGGTAAGGATAGGTATATTAATAATTATGACTTAATACACTTAGGATTCAAGATCCTATCGACTGGGGCAGGCTTAAGGTAAAGGTTCTTTAAGATGGCTTCTCTTCTGAAGAGCTTAGCCCTGTTCAAAAGGAACAAAGACAAGCCGCCTCTTGCTGCAGGTTCTGGTGGTGCTATCCGGGGAATCAAACATGTCATCGTTGTTCCGATCCCGGGAGATTCCTCAATCACCACAAGATCACGCCTTCTGGACCGTCTTGTTAAAATGGTAGGGGACCCAGGCATCAGTGGTCCTAAATTAACCGGG... | 50,942 |
MN632563.1 | Rinderpest morbillivirus | King,S., Rajko-Nenow,P., Ropiak,H.M., Ribeca,P., Batten,C., Baron,M.D., Ropiak,H. | The Pirbright Institute | null | 2020-04-27 | RPV023 | Morbillivirus pecoris | Morbillivirus | Paramyxoviridae | ssRNA(-) | 15,882 | GenBank | 1 | Kenya | Kenya | Bos taurus | null | 1988 | null | null | Rinderpest morbillivirus strain Kenya/Suswa/88 isolate RPV023, complete genome | ACCAAACAAAGTTGGGTAAGGATCGGTATGTTAATAATTATGGCTTAATACACTTAGGATTCAAGATCCTATCAACTGGAGCAGGCTTAAGGTAAAGGTTCTTTAAGATGGCTTCTCTCCTGAAGAGCTTAGCCCTGTTCAAAAGGAACAAAGACAAGGCGCCTCTTGCTGCAGGTTCTGGTGGTGCTATCCGGGGAATCAAACATGTCATCGTTGTTCCGATCCCGGGAGATTCCTCAATCACCACAAGATCACGCCTTCTGGACCGTCTTGTTAAGATGGTAGGGGACCCAGACATCAGTGGTCCTAAATTAACCGGG... | 50,943 |
MN632564.1 | Rinderpest morbillivirus | King,S., Rajko-Nenow,P., Ropiak,H.M., Ribeca,P., Batten,C., Baron,M.D., Ropiak,H. | The Pirbright Institute | null | 2020-04-27 | RPV026 | Morbillivirus pecoris | Morbillivirus | Paramyxoviridae | ssRNA(-) | 15,882 | GenBank | 1 | null | null | Oryctolagus cuniculus | null | null | null | null | Rinderpest morbillivirus strain Lap/PIADC/84 isolate RPV026, complete genome | ACCAAACAAAGTTGGGTAGGGGTCGGTATATTAATAATTATGATTTAGTACACTTAGGATTCAAGATCCTATCGACCGGAGTAGGCTTAAGGCAAAGGTTCTTTGAAATGGCTTCTCTCTTGAAGAGCTTGGCCCTATTCAAAAAGAACAAAGACAAACCACCCCTTGCTGCAGGCTCTGGTGGTGCTATTCGGGGAATCAAGCATGTCATTATTGTCCCGATCCCAGGAGACTCCTCAATCACCACAAGATCACGCCTTCTAGACTGTCTTGTTAAAATGGTGGGGGACCCAGACATCAGTGGTCCTAAATTGACTGGG... | 50,944 |
MN632565.1 | Rinderpest morbillivirus | King,S., Rajko-Nenow,P., Ropiak,H.M., Ribeca,P., Batten,C., Baron,M.D., Ropiak,H. | The Pirbright Institute | null | 2020-04-27 | RPV026p1 | Morbillivirus pecoris | Morbillivirus | Paramyxoviridae | ssRNA(-) | 15,882 | GenBank | 1 | null | null | Oryctolagus cuniculus | null | null | null | null | Rinderpest morbillivirus strain Lap/PIADC/84 isolate RPV026p1, complete genome | ACCAAACAAAGTTGGGTAGGGGTCGGTATATTAATAATTATGATTTAGTACACTTAGGATTCAAGATCCTATCGACCGGAGTAGGCTTAAGGCAAAGGTTCTTTGAAATGGCTTCTCTCTTGAAGAGCTTGGCCCTATTCAAAAAGAACAAAGACAAACCACCCCTTGCTGCAGGCTCTGGTGGTGCTATTCGGGGAATCAAGCATGTCATTATTGTCCCGATCCCAGGAGACTCCTCAATCACCACAAGATCACGCCTTCTAGACTGTCTTGTTAAAATGGTGGGGGACCCAGACATCAGTGGTCCTAAATTGACTGGG... | 50,945 |
MN632566.1 | Rinderpest morbillivirus | King,S., Rajko-Nenow,P., Ropiak,H.M., Ribeca,P., Batten,C., Baron,M.D., Ropiak,H. | The Pirbright Institute | null | 2020-04-27 | RPV027 | Morbillivirus pecoris | Morbillivirus | Paramyxoviridae | ssRNA(-) | 15,888 | GenBank | 1 | null | India | Capra hircus | lymph | null | null | null | Rinderpest morbillivirus strain GtVacc/India/Edwards_LN isolate RPV027, complete genome | ACCAAACAAAGTTGGGTATGGATAGGTATATCAATAATTATGATTTAGTACACTTAGGATTCAAGATCCTATCGACTGGATTAGGCTTAAGGCAAAGGTTCTTTAAAATGGCTTCTCTCCTGAAGAGCTTAGCCTTATTCAAAAAGAACAAGGACAAGCCACCCCTTGCTGCAGGCTCTGGTGGTGCTATCCGGGGAATTAAACATGTCATCATTGTTCCGATCCCTGGAGATTCCTCAATCACCACAAGGTCACGCCTTCTAGATCGTCTCGTCAAGATGGTGGGGGACCCAGATATCAGTGGCCCTAAATTAACCGGA... | 50,946 |
MN632567.1 | Rinderpest morbillivirus | King,S., Rajko-Nenow,P., Ropiak,H.M., Ribeca,P., Batten,C., Baron,M.D., Ropiak,H. | The Pirbright Institute | null | 2020-04-27 | RPV029 | Morbillivirus pecoris | Morbillivirus | Paramyxoviridae | ssRNA(-) | 15,882 | GenBank | 1 | null | null | Oryctolagus cuniculus | null | null | null | null | Rinderpest morbillivirus strain Lap/AVRI isolate RPV029, complete genome | ACCAAACAAAGTTGGGTAAGGATCGGTATATTAATAATTATGATTTAGTACACTTAGGATTCAAGATCCTATCGACCGGAGTAGGCTTAAGGCAAAGGTTCTTTGAAATGGCTTCTCTCTTGAAGAGCTTGGCCCTATTCAAAAAGAACAAAGACAAGCCACCCCTTGCTGCAGGCTCTGGTGGTGCTATTCGGGGAATCAAGCATGTCATTATTGTCCCGATCCCAGGAGACTCCTCAATCACCACAAGATCACGCCTTCTAGACTGTCTTGTTAGAATGGTGGGGGACCCAGACATCAGTGGTCCTAAATTGACTGGG... | 50,947 |
MN632568.1 | Rinderpest morbillivirus | King,S., Rajko-Nenow,P., Ropiak,H.M., Ribeca,P., Batten,C., Baron,M.D., Ropiak,H. | The Pirbright Institute | null | 2020-04-27 | RPV030 | Morbillivirus pecoris | Morbillivirus | Paramyxoviridae | ssRNA(-) | 15,882 | GenBank | 1 | Nigeria | Nigeria | Bos taurus | null | 1983 | null | null | Rinderpest morbillivirus strain Nigeria/Yankari/buffalo/83 isolate RPV030, complete genome | ACCAAACAAAGTTGGGTAAGGATAGGTATATTAATAATTATGACTTAATACACTTAGGATTCAAGATCCTATCGACTGGAGCAGGCTTAAGGTAAAGGTTCTTTAAGATGGCTTCTCTCCTGAAGAGCTTAGCCCTGTTCAAAAGGAACAAAGACAAGCCGCCTCTTGCTGCAGGTTCTGGTGGTGCTATCCGGGGAATCAAACATGTCATCGTTGTTCCGATCCCGGGAGATTCCTCAATCACCACAAGATCACGCCTTCTGGACCGTCTTGTTAAAATGGTAGGGGACCCAGACATCAGTGGTCCTAAATTAACCGGG... | 50,948 |
MN632569.1 | Rinderpest morbillivirus | King,S., Rajko-Nenow,P., Ropiak,H.M., Ribeca,P., Batten,C., Baron,M.D., Ropiak,H. | The Pirbright Institute | null | 2020-04-27 | RPV031 | Morbillivirus pecoris | Morbillivirus | Paramyxoviridae | ssRNA(-) | 15,882 | GenBank | 1 | Pakistan | Pakistan | Bos taurus | null | 1985 | null | null | Rinderpest morbillivirus strain Pakistan/85 isolate RPV031, complete genome | ACCAAACAAAGTTGGGTAAGGATAGGTATATCAATAATTGTGATTTAGTACACTTAGGATTCAAGATCCTATCGACTGGAACAGGCTTGAGACAAAGGTTCTTCAAAATGGCTTCTCTCCTGAAGAGTTTAGCCCTGTTCAAAAAGAATAAGGACAAGCCACCCCTTGCTGCAGGCTCTGGTGGTGCTATCCGGGGAATTAAACATGTCATTATTGTTCCGATCCCTGGAGATTCCTCAATCACCACAAGATCACGCCTTCTAGATCGTCTTGTCAAAATGGTGGGGGACCCTGATATCAGTGGCCCTAAACTAACCGGA... | 50,949 |
MN632570.1 | Rinderpest morbillivirus | King,S., Rajko-Nenow,P., Ropiak,H.M., Ribeca,P., Batten,C., Baron,M.D., Ropiak,H. | The Pirbright Institute | null | 2020-04-27 | RPV033p1 | Morbillivirus pecoris | Morbillivirus | Paramyxoviridae | ssRNA(-) | 15,882 | GenBank | 1 | null | null | Oryctolagus cuniculus | null | null | null | null | Rinderpest morbillivirus strain Lap/PIADC/82p1 isolate RPV033p1, complete genome | ACCAAACAAAGTTGGGTAGGGGTCGGTATATTAATAATTATGATTTAGTACACTTAGGATTCAAGATCCTATCGACCGGAGTAGGCTTAAGGCAAAGGTTCTTTGAAATGGCTTCTCTCTTGAAGAGCTTGGCCCTATTCAAAAAGAACAAAGACAAACCACCCCTTGCTGCAGGCTCTGGTGGTGCTATTCGGGGAATCAAGCATGTCATTATTGTCCCGATCCCAGGAGACTCCTCAATCACCACAAGATCACGCCTTCTAGACTGTCTTGTTAAAATGGTGGGGGACCCAGACATCAGTGGTCCTAAATTGACTGGG... | 50,950 |
NC_076623.1 | Rocahepevirus ratti | Wang,B., Li,W., Zhou,J.H., Li,B., Zhang,W., Yang,W.H., Pan,H., Wang,L.X., Bock,C.T., Shi,Z.L., Zhang,Y.Z., Yang,X.L., Yang,X.-L., Zhang,Y.-Z., Shi,Z.-L. | National Center for Biotechnology Information, NIH | USA | 2023-05-04 | RdHEVEm40/LuXi/2014 | Rocahepevirus ratti | Rocahepevirus | Hepeviridae | ssRNA(+) | 6,974 | RefSeq | 1 | China | China | Eothenomys melanogaster | liver, abdominal cavity | 2014 | null | PRJNA485481 | Rocahepevirus ratti isolate RdHEVEm40/LuXi/2014, complete genome | ACATGGGGGGAGCTCCCGTAGTTCGCTCCCGCCCCGCCGGTATGGAGGCACATCAGTACCTTCGTGCCGCCGGGGTAACTACGGCTTTAGAGGCTGCCGCTGTTGGTGCCGCCGCCGCTTCATTGGCGAATGCTTATGAGGTGCCGGTTTTTGTTTCCCAGCGCCAGGCGGAGCTATTAGTTTCTCTTTTTTCCCCTTTACAGCTTACCTTTAACCCCCAGCGCGTCTGGTCGCACCCAATACAGAGAGTTATCCATAACTATCTTGAGGGTGTTGCCAGGGCAAAGGCTGGCAGCTGCCTGGAGGTAGGCGCGCACCCC... | 558 |
OR500094.1 | Rocahepevirus ratti | Park,K., Kim,J., Noh,J., Kim,K., Yang,E., Kim,S.G., Cho,H.K., Byun,K.S., Kim,J.H., Lee,Y.S., Shim,J.O., Shin,M., Kim,W.K., Song,J.W., Song,J.-W. | Korea University College of Medicine, Department of Microbiology | null | 2024-01-28 | null | Rocahepevirus ratti | Rocahepevirus | Hepeviridae | ssRNA(+) | 6,951 | GenBank | 1 | South Korea: Seoul | South Korea | Rattus norvegicus | liver | 2011-02-28 | null | null | Rocahepevirus ratti strain Rn11-8, complete genome | AGCGCAACCCCCGATGGAGACCCATCAGTATGTCGCCGCCACGGGGGTTAATACTGCTAGGGAGGCCCAGGCTACTGCGGCAGCGGCTACCGCCTTTGCTAATGCTCAGGTGGTACGCCCATACTTGTCGCATTCTCAAGCCTCTCTTCTTGTTGAGCTCTTCTCCCCTCTGCAGCTTGTCTTTGAGCCCGCTGTTTCTTGGTCGCATCCGGTACAGCGCGTTATTCATAATTTTCTGGAGGCGTACGTCCGGCGCAAGGCTGGCCCTTGCCTGGAAGTCGGTGCGCACCCTCGATCTATTAATGAGCACGCCAATGTCA... | 9,404 |
OR500095.1 | Rocahepevirus ratti | Park,K., Kim,J., Noh,J., Kim,K., Yang,E., Kim,S.G., Cho,H.K., Byun,K.S., Kim,J.H., Lee,Y.S., Shim,J.O., Shin,M., Kim,W.K., Song,J.W., Song,J.-W. | Korea University College of Medicine, Department of Microbiology | null | 2024-01-28 | null | Rocahepevirus ratti | Rocahepevirus | Hepeviridae | ssRNA(+) | 6,946 | GenBank | 1 | South Korea: Seoul | South Korea | Rattus norvegicus | liver | 2016-08-27 | null | null | Rocahepevirus ratti strain Rn16-10, complete genome | CGCAACCCCCGATGGAGACCCATCAGTATGTCGCCGCCACGGGGGTTAATACTGCTAGGGAGGCCCAGGCCACTGCGGCAGCGGCTACCGCCTTTGCTAATGCTCAGGTGGTACGCCCATACCTGTCGCATTCTCAAGCCTCTCTTCTTGTTGAACTTTTCTCCCCTCTGCAGCTTGTCTTTGAACCTGCTGTTTCTTGGTCGCATCCGGTACAGCGCGTTATTCATAATTTTCTGGAGGCGTACGTCCGGCGCAAGGCTGGCCCTTGCTTGGAGGTTGGTGCGCACCCTCGATCTATTAATGAGCACGCCAATGTTACA... | 9,405 |
OR500096.1 | Rocahepevirus ratti | Park,K., Kim,J., Noh,J., Kim,K., Yang,E., Kim,S.G., Cho,H.K., Byun,K.S., Kim,J.H., Lee,Y.S., Shim,J.O., Shin,M., Kim,W.K., Song,J.W., Song,J.-W. | Korea University College of Medicine, Department of Microbiology | null | 2024-01-28 | null | Rocahepevirus ratti | Rocahepevirus | Hepeviridae | ssRNA(+) | 6,984 | GenBank | 1 | South Korea: Jeju | South Korea | Rattus norvegicus | liver | 2019-12-29 | null | null | Rocahepevirus ratti strain Rn19-14, complete genome | GCAACCCCCGATGGAGACCCATCAGTATGTCGCCGCCACGGGGGTTAATACTGCTAGAGAGGCCCAGGCCACTGCGGCAGCGGCTACCGCCTTTGCTAATGCTCAGGTGGTACGCCCATACCTGTCGCATTCTCAAGCCTCTCTCCTTGTTGAGCTTTTCTCCCCTCTGCAGCTTGTCTTTGAGCCCGCTGTTTCTTGGTCGCATCCGGTACAGCGCGTTATTCATAATTTTCTGGAGGCGTACGTCCGGCGCAAGGCTGGCCCTTGCTTGGAGGTCGGTGCGCACCCTCGATCTATTAATGAGCACGCCAATGTTACAC... | 9,406 |
ON887282.1 | Rocahepevirus ratti | Wu,H., Li,B., Hu,L., Zhou,L., Lu,Y. | School of Public Health, Fudan University, Department of Epidemiology | China | 2023-03-20 | MSE-17 | Rocahepevirus ratti | Rocahepevirus | Hepeviridae | ssRNA(+) | 6,846 | GenBank | null | China: Yunnan Province | China | Rattus tanezumi | liver, abdominal cavity | 2019-07-30 | null | null | Rocahepevirus ratti isolate MSE-17, complete genome | GCAACCCCCGATGGAGACCCATCAATATGTCGCCGCCACGGGGGTTAATACTGCTAGAGAGGCCCAGGCTACTGCGGCAGCGGCTACCGCCTTTGCTAATGCTCAGGTGGTTCGCCCCTTCCTGTCGCATTCTCAAGCCTCTCTCCTTGTTGAGCTTTTCTCCCCTTTGCAGCTTGTCTTTGAGCCCGCTGTTTCTTGGTCGCATCCGGTACAGCGTGTTATTCATGATTTTCTGGAGACGTACGTCCGCCGCAAGGCTGGCCATTGCCTGGAGGTCGGTGCGCACCCTCGGTCTATTAATGAGCACGCCAATGTCATAC... | 17,324 |
ON887283.1 | Rocahepevirus ratti | Wu,H., Li,B., Hu,L., Zhou,L., Lu,Y. | School of Public Health, Fudan University, Department of Epidemiology | China | 2023-03-20 | LHK-54 | Rocahepevirus ratti | Rocahepevirus | Hepeviridae | ssRNA(+) | 6,852 | GenBank | null | China: Yunnan Province | China | Rattus tanezumi | liver, abdominal cavity | 2019-08-11 | null | null | Rocahepevirus ratti isolate LHK-54, complete genome | GCAACCCCCGATGGAGACCCATCAGTATGTCGCCGCCACGGGGGTTAATACTGCTAGAGAGGCCCAGGCTACTGCGGCAGCGGCTACCGCCTTTGCTAATGCTCAGGTGGTTCGCCCCTTCCTGTCGCATTCTCAAGCCTCTCTGCTTGTTGAGCTCTTCTCCCCTTTGCAGCTTGTCTTTGAGCCCGCTGTTTCTTGGTCGCATCCGGTACAGCGTGTTATTCATGATTTTCTGGAGGCGTATGTCCGCCGCAAGGCTGGCCCTTGCTTGGAGGTCGGTGCGCACCCTCGATCTATTAATGAGCATGCCAATGTCATAC... | 17,325 |
ON009840.1 | Rocahepevirus ratti | Ma,X., Li,L., Wang,J., Chai,S., Zheng,G., Duan,Z. | China CDC, Department of Viral Diarrhea, Institute for Viral Disease Control and Prevention | China | 2022-09-20 | Nmr103C | Rocahepevirus ratti | Rocahepevirus | Hepeviridae | ssRNA(+) | 7,251 | GenBank | null | China | China | Microtus fortis | feces, abdominal cavity | 2017-07 | null | null | Rocahepevirus ratti isolate Nmr103C, complete genome | TGGGGGTAACACACCCCAGCTATTGCGGGGTGGTGGGCATGGAGGCCCATCAATTCCTCAGTTGCTCGGGTGTGAAGACTGCGCTTGAGAATGCAGCGACTACCGCTGCTGCCGCCGCATTTGTGAATGCTCATGTGGTGAACGCGTATGTCTCCCAGCAACAGGCTCAGCTTTTGATCTCGCTGTTCCAACCGGTTCAGCTAAAGTTCGAGCCAAGTGTTACCTGGTCGCACCCGATTCAGCGTGTGATCCATAATTATTTAGAAGCCTATGTACGTAGAAAGGCCGGCAAATGTTTAGAAGTAGGAGCCCACCCCCGG... | 24,398 |
ON009841.1 | Rocahepevirus ratti | Ma,X., Li,L., Wang,J., Chai,S., Zheng,G., Duan,Z. | China CDC, Department of Viral Diarrhea, Institute for Viral Disease Control and Prevention | China | 2022-09-20 | Nmr99P | Rocahepevirus ratti | Rocahepevirus | Hepeviridae | ssRNA(+) | 7,241 | GenBank | null | China | China | Cricetulus sokolovi | spleen, abdominal cavity | 2017-07 | null | null | Rocahepevirus ratti isolate Nmr99P, complete genome | CACACCCCAGCTATTGCGGGGTGGTGGGCATGGAGGCCCATCAATTCCTCAGTTGCTCGGGTGTGAAGACTGCGCTTGAGACTGCAGCGACTACCGCTGCCGCCGCCGCATTTGTGAATGCTCATGTGGTGAACGCGTATGTCTCCCAGCAACAGGCTCAGCTTTTGATCTCGCTGTTCCAACCAGTTCAGCTAAAGTTCGAGCCAAGTGTTACCTGGTCGCACCCGATCCAGCGTGTGATCCATAATTATTTAGAAGCCTATGTACGTAGAAAGGCCGGTAAATGTTTAGAAGTAGGAGCCCACCCCCGATCTATTAAT... | 24,399 |
ON644869.1 | Rocahepevirus ratti | de Cock,M., Fonville,M., Vries,A., Bossers,A., van den Bogert,B., Hakze-van der Honing,R., Koets,A., Sprong,H., van der Poel,W., Maas,M. | Central Vetinary Institute of Wageningen UR, Virologie | Netherlands | 2022-07-23 | rat-87 | Rocahepevirus ratti | Rocahepevirus | Hepeviridae | ssRNA(+) | 6,877 | GenBank | null | Netherlands: Baarle Nassau | Netherlands | Rattus rattus | liver | 2016-06-17 | SAMN28631624 | PRJNA841946 | MAG: Rocahepevirus ratti isolate rat-87, complete genome | GCAACCCCCGATGGAGACCCATCAGTATGTCGCCGCCACGGGGGTTAATACTGCTAGAGAGGCCCAGGCTACTGCGGCAGCGGCTACCGCCTTTGCTAATGCTCAGGTGGTACGCCCCTACCTGTCGCATTCTCAAGCCTCTCTCCTTGTTGAGCTTTTCTCCCCTTTGCAGCTTGTCTTTGAGCCCGCTGTTTCTTGGTCGCATCCGGTACAGCGCGTTATTCATAATTTTTTGGAGGCGTACGTCCGGCGCAAGGCTGGCCCTTGCTTGGAGATCGGTGCGCACCCTCGGTCTATTAATGAGCACGCCAACGTCATAC... | 27,866 |
MZ868954.1 | Rocahepevirus ratti | Ma,X., Li,L., Wang,J., Chai,S., Duan,Z., Zheng,G. | China CDC, Department of Viral Diarrhea, Institute for Viral Disease Control and Prevention | China | 2021-11-04 | YnrG41 | Rocahepevirus ratti | Rocahepevirus | Hepeviridae | ssRNA(+) | 7,002 | GenBank | null | China | China | Rattus norvegicus | liver, abdominal cavity | 2016-06 | null | null | Rocahepevirus ratti isolate YnrG41, complete genome | GCAACCCCCGATGGAGACCCATCAGTATGTCGCCGCCACGGGGGTTAACACTGCTAGGGAGGCCCAGGCTACTGCGGCAGCGGCTACCGCCTTTGCTAATGCTCAGGTGGTACGCCCCTACCTGTCGCATTCTCAAGCTTCCCTTCTTGTTGAGCTTTTCTCCCCTTTGCAGCTTGTCTTTGAGCCCTCTGTTTCTTGGTCGCATCCGGTACAGCGTGTTATTCATAATTTTCTGGAGGCGTACGTCCGCCGCAAGGCTGGCGCTTGCCTGGAGGTCGGTGCGCACCCTAGATCTATTAATGAGCACGCCAATGTCATTC... | 36,201 |
MZ542728.1 | Rocahepevirus ratti | Ma,X., Li,L., Wang,J., Chai,S., Duan,Z., Zheng,G. | China CDC, Department of Viral Diarrhea, Institute for Viral Disease Control and Prevention | China | 2021-11-01 | YnrG38 | Rocahepevirus ratti | Rocahepevirus | Hepeviridae | ssRNA(+) | 6,998 | GenBank | null | China | China | Rattus norvegicus | liver, abdominal cavity | 2016-06 | null | null | Orthohepevirus C isolate YnrG38, complete genome | GCAACCCCCGATGGAGACCCATCAGTATGTCGCCGCCACGGGGGTTAATACTGCTAGGGAGGCCCAGGCCACTGCGGCAGCGGCTACCGCCTTTGCTAATGCTCAGGTGGTTCGCCCCTACTTGTCGCATTCTCAAGCTTCCCTGCTTGTTGAGCTTTTCTCCCCTCTGCAGCTTGTCTTTGAGCCCGCTGTTTCTTGGTCGCATCCGGTACAGCGTGTTATTCATAATTTTCTGGAGGCGTACGTCCGCCGCAAGGCTGGCGCTTGCCTGGAGGTCGGTGCGCACCCTAGGTCTATTAATGAGCACGCCAATGTTATTC... | 36,296 |
MW391926.1 | Rocahepevirus ratti | Zhu,W. | National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention | China | 2021-10-17 | YS19 | Rocahepevirus ratti | Rocahepevirus | Hepeviridae | ssRNA(+) | 6,948 | GenBank | null | China | China | Ochotona curzoniae | feces | 2019-07 | null | null | Rocahepevirus ratti isolate YS19, complete genome | CCCATGGAGACGCATCAGTATGTCTCCTCCGTGGGGGTATCGACAGCTAGGGAGGCACAGGCTACAGCGGCCGCGACTACCGCGTTTGCTAATGCTCACGTGGTTCGCCCGTTCCTGTCGCATGCCCAGGCTTCGCTTCTTGTTGAACTCTTTTCCCCTATGCAACTTGTCTTTGAACCCTCTGTTCTTTGGTCGCATCCGATACAGCGTACTGTTCATAATTTTCTGGAGGCGTACGTCCGTAGGAAGGCAGGCCCTTGCTTGGAGGTTGGTGCGCACCCTAGGTCTATTAATGAGAATGGGGCCGTGTTACATCGATG... | 36,866 |
MN450851.1 | Rocahepevirus ratti | Sridhar,S., Yip,C.C., Wu,S., Chew,N.F., Leung,K.H., Chan,J.F., Zhao,P.S., Chan,W.M., Poon,R.W., Tsoi,H.W., Cai,J.P., Chan,H.S., Leung,A.W., Tse,C.W., Zee,J.S., Tsang,O.T., Cheng,V.C., Lau,S.K., Woo,P.C., Tsang,D.N., Yuen,K.Y., Yip,C.C.Y. | The University of Hong Kong, Department of Microbiology | China | 2021-07-06 | null | Rocahepevirus ratti | Rocahepevirus | Hepeviridae | ssRNA(+) | 6,944 | GenBank | 1 | Hong Kong | Hong Kong | Homo sapiens | null | 2017 | null | null | Rocahepevirus ratti strain pt 2, complete genome | GCAACCCCCGATGGAGACCCATCAGTATGTCGCCGCCACGGGGGTTAATACTGCTAGGGAGGCCCAGGCCACTGCGGCAGCGGCTACCGCCTTTGCTAATGCTCAGGTGGTTCGCCCCTACTTGTCGCATTCTCAAGCTTCCCTGCTTGTTGAGCTTTTCTCCCCTTTGCAGCTTGTCTTTGAGCCCGCTGTTTCTTGGTCGCATCCGGTACAGCGTGTTATTCATAATTTTCTGGAGGCGTACGTCCGCCGCAAGGCTGGCGCTTGCCTGGAGGTCGGTGCGCACCCTAGGTCTATTAATGAGCACGCCAATGTCATTC... | 40,746 |
MN450852.1 | Rocahepevirus ratti | Sridhar,S., Yip,C.C., Wu,S., Chew,N.F., Leung,K.H., Chan,J.F., Zhao,P.S., Chan,W.M., Poon,R.W., Tsoi,H.W., Cai,J.P., Chan,H.S., Leung,A.W., Tse,C.W., Zee,J.S., Tsang,O.T., Cheng,V.C., Lau,S.K., Woo,P.C., Tsang,D.N., Yuen,K.Y., Yip,C.C.Y. | The University of Hong Kong, Department of Microbiology | China | 2021-07-06 | null | Rocahepevirus ratti | Rocahepevirus | Hepeviridae | ssRNA(+) | 6,942 | GenBank | 1 | Hong Kong | Hong Kong | Homo sapiens | null | 2018 | null | null | Rocahepevirus ratti strain pt 3, complete genome | GCAACCCCCGATGGAGACCCATCAGTATGTCGCCGCCACGGGGGTTAATACTGCTAGGGAGGCCCAGGCCACTGCGGCAGCGGCTACCGCCTTTGCTAATGCTCAGGTGGTTCGCCCCTACTTGTCGCATTCTCAAGCTTCCCTGCTTGTTGAGCTCTTCTCCCCTCTGCAGCTTGTCTTTGAGCCCGCTGTTTCTTGGTCGCATCCGGTACAGCGTGTTATTCATAATTTTCTGGAGGCGTACGTCCGCCGCAAGGCTGGCGCTTGCCTGGAGGTCGGTGCGCACCCTAGGTCTATTAATGAGCACGCCAATGTTATTC... | 40,747 |
MN450853.1 | Rocahepevirus ratti | Sridhar,S., Yip,C.C., Wu,S., Chew,N.F., Leung,K.H., Chan,J.F., Zhao,P.S., Chan,W.M., Poon,R.W., Tsoi,H.W., Cai,J.P., Chan,H.S., Leung,A.W., Tse,C.W., Zee,J.S., Tsang,O.T., Cheng,V.C., Lau,S.K., Woo,P.C., Tsang,D.N., Yuen,K.Y., Yip,C.C.Y. | The University of Hong Kong, Department of Microbiology | China | 2021-07-06 | null | Rocahepevirus ratti | Rocahepevirus | Hepeviridae | ssRNA(+) | 6,987 | GenBank | 1 | Hong Kong | Hong Kong | Homo sapiens | null | 2018 | null | null | Rocahepevirus ratti strain pt 5, complete genome | GCAACCCCCGATGGAGACCCATCAGTATGTCGCCGCCACGGGGGTTAACACTGCTAGGGAGGCCCAGGCCACTGCGGCAGCGGCTACCGCCTTTGCTAATGCTCAGGTGGTACGCCCCTACCTGTCGCATTCTCAAGCTTCCCTGCTTGTTGAGCTTTTCTCCCCTTTGCAGCTTGTCTTTGAGCCCTCTGTTTCTTGGTCGCATCCGGTACAGCGTGTTATTCATAATTTTCTGGAGGCGTACGTCCGCCGCAAGGCTGGCGCTTGCCTGGAGGTTGGTGCGCACCCTAGATCTATTAATGAGCACGCCAATGTCATTC... | 40,748 |
MN450854.1 | Rocahepevirus ratti | Sridhar,S., Yip,C.C., Wu,S., Chew,N.F., Leung,K.H., Chan,J.F., Zhao,P.S., Chan,W.M., Poon,R.W., Tsoi,H.W., Cai,J.P., Chan,H.S., Leung,A.W., Tse,C.W., Zee,J.S., Tsang,O.T., Cheng,V.C., Lau,S.K., Woo,P.C., Tsang,D.N., Yuen,K.Y., Yip,C.C.Y. | The University of Hong Kong, Department of Microbiology | China | 2021-07-06 | null | Rocahepevirus ratti | Rocahepevirus | Hepeviridae | ssRNA(+) | 6,942 | GenBank | 1 | Hong Kong | Hong Kong | Homo sapiens | null | 2019 | null | null | Rocahepevirus ratti strain pt 8, complete genome | GCAACCCCCGATGGAGACCCATCAGTATGTCGCCGCCACGGGGGTTAATACCGCTAGGGAGGCCCAGGCCACTGCGGCAGCGGCTACCGCCTTTGCTAATGCTCAGGTGGTTCGCCCCTACTTGTCGCATTCTCAAGCTTCCCTGCTTGTTGAGCTTTTCTCCCCTTTGCAGCTTGTCTTTGAGCCCGCTGTTTCTTGGTCGCATCCGGTACAGCGTGTTATTCATAATTTTCTGGAGGCGTACGTCCGCCGCAAGGCTGGCGCTTGCCTGGAGGTCGGTGCGCACCCTAGGTCTATTAATGAGCACGCCAATGTCATTC... | 40,749 |
MN450855.1 | Rocahepevirus ratti | Sridhar,S., Yip,C.C., Wu,S., Chew,N.F., Leung,K.H., Chan,J.F., Zhao,P.S., Chan,W.M., Poon,R.W., Tsoi,H.W., Cai,J.P., Chan,H.S., Leung,A.W., Tse,C.W., Zee,J.S., Tsang,O.T., Cheng,V.C., Lau,S.K., Woo,P.C., Tsang,D.N., Yuen,K.Y., Yip,C.C.Y. | The University of Hong Kong, Department of Microbiology | China | 2021-07-06 | null | Rocahepevirus ratti | Rocahepevirus | Hepeviridae | ssRNA(+) | 6,945 | GenBank | 1 | Hong Kong | Hong Kong | Rattus norvegicus | null | 2019 | null | null | Rocahepevirus ratti strain WTSRN170519-1, complete genome | GCAACCCCCGATGGAGACCCATCAGTATGTCGCCGCCACGGGGGTTAATACTGCTAGGGAGGCCCAGGCTACTGCGGCAGCGGCTACCGCCTTTGCTAATGCTCAGGTGGTTCGCCCCTACTTGTCGCATTCTCAAGCTTCCCTGCTTGTTGAGCTTTTCTCCCCTTTGCAGCTTGTCTTTGAGCCCGCTGTTTCTTGGTCGCATCCGGTACAGCGTGTTATTCATAATTTTCTGGAGGCGTACGTCCGCCGCAAGGCTGGCGCTTGCCTGGAGGTCGGTGCGCACCCTAGGTCTATTAATGAGCACGCCAATGTCATTC... | 40,750 |
MK050105.1 | Rocahepevirus ratti | Andonov,A., Robbins,M., Borlang,J., Cao,J., Hatchette,T., Stueck,A., Deschaumbault,Y., Murnaghan,K., Varga,J., Johnston,L. | Public Health Agency of Canada, National Microbiology Laboratory | Canada | 2019-01-31 | null | Rocahepevirus ratti | Rocahepevirus | Hepeviridae | ssRNA(+) | 6,972 | GenBank | 1 | Canada | Canada | Homo sapiens | blood | 2017-04-10 | null | null | Rocahepevirus ratti strain HEV 17/1683, complete genome | GNAACCCCTGATGGAGACCCATCAGTATGTCGCCGCCACGGGGGTTAATACTGCTAGAGAGGCCCAGGCAACTGCAGCGGCTGCTACCGCCTTTGCTAATGCTCAGGTGGTACGCCCCTACTTGTCGCATTCTCAAGCCTCTCTACTTGTTGAGCTTTTCTCCCCTTTGCAGCTTGTCTTTGAACCCGCTGTTTCTTGGTCGCATCCGGTACAGCGTGTTATTCATGATTTTCTGGAGGCGTACGTCCGCAGAAAGGCTGGCCCTTGCTTGGAGATCGGTGCGCACCCTCGATCTATTAATGAGCACGCCAATGTCTTAC... | 65,594 |
MG020022.1 | Rocahepevirus ratti | Wang,B., Li,W., Zhou,J.H., Li,B., Zhang,W., Yang,W.H., Pan,H., Wang,L.X., Bock,C.T., Shi,Z.L., Zhang,Y.Z., Yang,X.L., Yang,X.-L., Zhang,Y.-Z., Shi,Z.-L. | Robert Koch Institute, Infectious Diseases | Germany | 2018-03-26 | RdHEVAc14/LiJiang/2015 | Rocahepevirus ratti | Rocahepevirus | Hepeviridae | ssRNA(+) | 6,982 | GenBank | 1 | China | China | Apodemus chevrieri | liver, abdominal cavity | 2015 | null | null | Rocahepevirus ratti isolate RdHEVAc14/LiJiang/2015, complete genome | ACATGGGGGCAACCCCCGATGGAGACCCATCAGTATGTGTCCTCCGTGGGGGTATCGACAGCTAGGGAGGCACAGGCTACCGCGGCCGCGACTACCGCGTTTGCTAATGCTCACGTGGTTCGCCCGTTCCTGTCGCATGCCCAGGCTTCGCTTCTTGTTGAGCTCTTTTCCCCCATGCAACTTATTTTTGAACCAGCTGTTCTTTGGGCGCATCCGATACAGCGCACTATCCATAATTTTCTGGAGGCGTACGTCCGCCGGAAGGCTGGCCCTTGTCTGGAGGTTGGTGCGCACCCTAGGTCTATTAATGAGAATGGGGC... | 71,533 |
MG020023.1 | Rocahepevirus ratti | Wang,B., Li,W., Zhou,J.H., Li,B., Zhang,W., Yang,W.H., Pan,H., Wang,L.X., Bock,C.T., Shi,Z.L., Zhang,Y.Z., Yang,X.L., Yang,X.-L., Zhang,Y.-Z., Shi,Z.-L. | Robert Koch Institute, Infectious Diseases | Germany | 2018-03-26 | RdHEVAc86/LiJiang/2015 | Rocahepevirus ratti | Rocahepevirus | Hepeviridae | ssRNA(+) | 6,980 | GenBank | 1 | China | China | Apodemus chevrieri | liver, abdominal cavity | 2015 | null | null | Rocahepevirus ratti isolate RdHEVAc86/LiJiang/2015, complete genome | ACATGGGGGCAACCCCCGATGGAGACTCATCAGTATGTCTCCTCCGTGGGGGTATCGACAGCTAGGGAGGCACAGGCTACCGCGGCCGCGACTACCGCGTTTGCTAATGCTCACGTGGTTCGCCCGTTCCTGTCGCATGCCCAGGCTTCGCTTCTTGTTGAGCTCTTTTCCCCCATGCAACTTATTTTTGAACCAGCTGTTCTTTGGGCGCATCCGATACAGCGCACTATTCATAATTTTCTGGAGGCGTACGTCCGCCGGAAGGCTGGCCCTTGTCTGGAGGTTGGTGCGCACCCTAGGTCTATTAATGAGAATGGGGC... | 71,534 |
NC_036583.1 | Rodent astrovirus | To,K.K.W., Chan,W.M., Li,K.S.M., Lam,C.S.F., Chen,Z., Tse,H., Lau,S.K.P., Woo,P.C.Y., Yuen,K.Y. | National Center for Biotechnology Information, NIH | USA | 2018-01-13 | GX-006 | Rodent astrovirus | Mamastrovirus | Astroviridae | ssRNA(+) | 6,861 | RefSeq | 1 | China | China | Rattus norvegicus | null | null | null | PRJNA485481 | Rodent astrovirus isolate GX-006, complete genome | GCAGCAGTCAATGCTGGCAACTATGCAACTCGCCTACAGCTGAGTGAGCAACATCTCTACAAGCTTAGGCAAATACCTGAACACATGTTGAATGCCCCCTGGTCTATCCATTCACCACCACGGACTATGATCTACCCTGGACCGGATGCCTATCCCCCTGTACGGGTGACAACTGCTTCATCGGTAACGGTCGACAATGAATGGGTAACGTATGTTCTGGATGGTGACGACTGGGTACAATGTGTGACTGCCCCTGATGACCAGAATGTGATCTTGGTTTGTGCACTTCTTAATGATAATAACCGCCTAAAACGCGAAAT... | 4,264 |
OR774966.1 | Rodent astrovirus | Xia,X., Wang,B., Hou,J., Huang,X., Yang,L., Le,X., Ning,Y., Wang,J. | Faculty of Life Science and Technology, Kunming University of Science and Technology | China | 2023-11-18 | DhLh72022 | Rodent astrovirus | Mamastrovirus | Astroviridae | ssRNA(+) | 6,820 | GenBank | null | China | China | Rattus tanezumi | null | 2022-07 | null | null | Rodent astrovirus isolate DhLh72022, complete genome | GCCCTGGGCGATGGCCGCTTTTAAGCGTGTCTATGCCTCCCGCGTGGATGCCGCGGTGAATTCCGGCAACTACCTTGCCCGCGTAATGCTGGGCGAGCAGGCTATTTATAGCCTGCGTAAGGTTAAGGAACACCTGCCGGACTCACCCTGGTCAATCCACAGCGCACCCCGACACTTGATCTACCCCAGCACCACAATGGACCCTAAGGACAGGGTAATAACTGCATCCTCTGTAACAACTGAGAATGAATGGGTCACCTACATCTGGAATGGTGCTGACTGGGTCCAGGTCGCAACTGCACCTGATGATCAAGCTGTCA... | 10,831 |
OR711901.1 | Rodent astrovirus | Xia,X., Wang,B., Hou,J., Huang,X., Yang,L., Le,X., Ning,Y., Wang,J. | Faculty of Life Science and Technology, Kunming University of Science and Technology | China | 2023-11-11 | YNKm72022 | Rodent astrovirus | Mamastrovirus | Astroviridae | ssRNA(+) | 6,688 | GenBank | null | China | China | Rattus norvegicus | null | 2022-07 | null | null | Rodent astrovirus strain CHN/YN/KM-5/2022, complete genome | GAGGTGGCCTCTGGCTGACCGGCATGCTTGCAAACGGTGTCTCCAAGCTTGACAAAACCCTAGCACGAGGTTCCAAGATGGCTCGCAGGGCTGCAACACCGCAGATGCTAGCAGGGCTTGCAGCCCTTAATCCCACTGCACCCTGGCACTTTGCTCGTGCCAGGCGAGAGCTCTACTTCCCAGCCACAGGTACGACCCTGTTGACTCTGGCGTCGACCGTGATGCGGGACAATGAGTGGACCACTTATGCGTGGGATGGCAGTTGGGTTGAGGTGCCCTCCATTGCTCCTGATCCCACTACTGCCTTTGCGGGTGCAGCA... | 11,118 |
MW927503.1 | Rodent astrovirus | Yin,H.C., Wan,D.C., Chen,H.Y., C,Y.H. | Qiqihar University, College of Life Science and Agriculture Forestry | China | 2023-05-20 | CHNDB/2019 | Rodent astrovirus | Mamastrovirus | Astroviridae | ssRNA(+) | 6,192 | GenBank | 1 | China | China | Rodentia | null | 2019-05-16 | null | null | UNVERIFIED: Rodent astrovirus isolate CHNDB/2019, complete genome | GTGGTGCCGTGTGTATACTCGCACAGAATAGACGATGTACGTCAACCTTGTGGATCGAGCGCGCGACCTGGTCACCTATCGTGGCCGGCCGGACTTGGCTCCTGAAGCATTCGTTCAATCAAATCGGATGTACGATATCCCCAGTCCTTGGGATTTCTCTACACCTTTGCGCCAGGTTGTCTACCTCGGCCCCATATGTCAACGGCGGGTTGTGGTGGCTTCAACAATATTGGATAATGACTGGTGCTTGTACGTGGGGGAGGGCATGGAACGCGTGTGCGTTATAGTCCCCCCGACACCTGAGAATCAGACCCACGTAC... | 15,654 |
MT506231.1 | Rodent astrovirus | Li,L., Xu,Y., Liu,M., Duan,Z. | Institute for Viral Disease Control and Prevention, China CDC, Department of Viral Diarrhea | China | 2020-08-29 | RoAstV/CHN/S3 | Rodent astrovirus | Mamastrovirus | Astroviridae | ssRNA(+) | 6,705 | GenBank | null | China | China | Rattus norvegicus | null | 2016-12 | null | null | Rodent astrovirus isolate RoAstV/CHN/S3, complete genome | ATGGCTTCCTTCCAGAGAGCTTACACCTCAAAGGTTGATCTTGCTGTCAACGGAGGCAACTACCTCGCCCGCTTGCAAGTGGGTGAGCATGCCATCTATCAGCTTAGGAAGCTTAAGGAGCATCGCGCTGACGCTCCTTGGAGTGTACATAGCACCCCTAGCTATCTAATTTACCCCTCAAGCGCACCAGATATAAAGGTGCGCGTGCACACTGCGTCATCTGTAACTGTGCACAATGAGTGGGTGACTTATGTCTGGGATGGCACCCGTTGGCAGCAGACTGCGACTGCACCGGATGATCAGGCAGTTATCCTTGTTTG... | 47,689 |
KT946726.1 | Rodent astrovirus | To,K.K.W., Chan,W.M., Li,K.S.M., Lam,C.S.F., Chen,Z., Tse,H., Lau,S.K.P., Woo,P.C.Y., Yuen,K.Y. | The University of Hong Kong, Microbiology | Hong Kong | 2017-12-19 | HK-22103F | Rodent astrovirus | Mamastrovirus | Astroviridae | ssRNA(+) | 6,767 | GenBank | 1 | Hong Kong | Hong Kong | Rattus andamanensis | null | null | null | null | Rodent astrovirus isolate HK-22103F, complete genome | AAGACCCCTGGCTATGGCCGCTTTTAAGCGTGTCTATGCCTCCCGTGTGGATGCCGCGGTGAACTCCGGCAACTACCTTGCACGCCTGATGCTAGGCGAGCAGGCCATTTACGGCCTGCGCAAGGTTAAGGAACACCTGCCGGACTCACCCTGGTCAATCCACAGCGCACCACGTCACCTGATCTTCCCAAGTACGACCATGGACCCCAAAGACAGGGTGATAACGGCGTCCTCTGTCACCGTTGAGAACGAATGGGTTACCTACATCTGGAATGGCTCGGACTGGGTACAGGTTGCTACGGCACCTGATGATCAAGCGG... | 72,977 |
KT946727.1 | Rodent astrovirus | To,K.K.W., Chan,W.M., Li,K.S.M., Lam,C.S.F., Chen,Z., Tse,H., Lau,S.K.P., Woo,P.C.Y., Yuen,K.Y. | The University of Hong Kong, Microbiology | Hong Kong | 2017-12-19 | HK-4214F | Rodent astrovirus | Mamastrovirus | Astroviridae | ssRNA(+) | 6,775 | GenBank | 1 | Hong Kong | Hong Kong | Rattus andamanensis | null | null | null | null | Rodent astrovirus isolate HK-4214F, complete genome | CCAAAGACCCCTGGCTATGGCCGCTTTTAAGCGTGTCTATGCCTCGCGCGTGGACGCCGCGGTGAACTCCGGCAACTACCTTGCACGCCTGATGCTAGGCGAGCAGGCCATCTACGGCCTGCGCAAGGTTAAGGAACACCTGCCGGACTCACCCTGGTCAATCCACAGCGCACCACGTCACCTGATCTTCCCAAGTACGACCATGGACCCCAAAGACAGGGTGATAACAGCGTCCTCTGTCACCGTTGAGAACGAATGGGTTACCTACATCTGGAATGGCTCGGATTGGGTGCAGGTTGCTACGGCACCTGATGATCAAG... | 72,978 |
KT946728.1 | Rodent astrovirus | To,K.K.W., Chan,W.M., Li,K.S.M., Lam,C.S.F., Chen,Z., Tse,H., Lau,S.K.P., Woo,P.C.Y., Yuen,K.Y. | The University of Hong Kong, Microbiology | Hong Kong | 2017-12-19 | HK-12111F | Rodent astrovirus | Mamastrovirus | Astroviridae | ssRNA(+) | 6,766 | GenBank | 1 | Hong Kong | Hong Kong | Rattus andamanensis | null | null | null | null | Rodent astrovirus isolate HK-12111F, complete genome | CCAAAGACCCCTGGCGATGGCCGCTTTTAAGCGTGTCTATGCCTCCCGCGTGGATGCCGCGGTGAACTCCGGCAACTACCTTGCACGCCTAATGTTAGGCGAGCAGGCCATCTATGGCCTGCGCAAGGTTAAGGAACACCTGCCGGATTCACCCTGGTCAATCCACAGCGCACCACGCCACTTGATCTTCCCAAGCACAGTCGTCGACCCCAGGGACAGGGTGATAACAGCATCCTCTGTCACCGTTGAGAATGAATGGGTTACCTACATATGGAACGGCTCGGATTGGGTGCAGGTTGCCACGGCACCTGATGATCAAG... | 72,979 |
KT946729.1 | Rodent astrovirus | To,K.K.W., Chan,W.M., Li,K.S.M., Lam,C.S.F., Chen,Z., Tse,H., Lau,S.K.P., Woo,P.C.Y., Yuen,K.Y. | The University of Hong Kong, Microbiology | Hong Kong | 2017-12-19 | HK-13112F | Rodent astrovirus | Mamastrovirus | Astroviridae | ssRNA(+) | 6,759 | GenBank | 1 | Hong Kong | Hong Kong | Rattus andamanensis | null | null | null | null | Rodent astrovirus isolate HK-13112F, complete genome | GATGGCCGCTTTTAAGCGTGTCTATGCCTCCCGCGTGGATGCCGCGGTGAACTCCGGCAACTACCTTGCACGCCTAATGTTAGGCGAGCAGGCCATCTATGGCCTGCGCAAGGTTAAGGAACACCTGCCGGATTCACCCTGGTCAATCCACAGCGCACCACGCCACTTGATCTTCCCAAGCACAGTCGTCGACCCCAGGGACAGGGTGATAACAGCATCCTCTGTCACCGTTGAGAATGAATGGGTTACCTACATATGGAACGGCTCGGATTGGGTGCAGGTTGCCACGGCACCTGATGATCAAGCGGTGATTCTGGTGT... | 72,980 |
KT946730.1 | Rodent astrovirus | To,K.K.W., Chan,W.M., Li,K.S.M., Lam,C.S.F., Chen,Z., Tse,H., Lau,S.K.P., Woo,P.C.Y., Yuen,K.Y. | The University of Hong Kong, Microbiology | Hong Kong | 2017-12-19 | HK-25315A | Rodent astrovirus | Mamastrovirus | Astroviridae | ssRNA(+) | 6,778 | GenBank | 1 | Hong Kong | Hong Kong | Rattus andamanensis | null | null | null | null | Rodent astrovirus isolate HK-25315A, complete genome | CCAAAGACCCCTGGCTATGGCCGCTTTTAAGCGTGTCTATGCCTCCCGTGTGGACGCCGCGGTGAACTCCGGCAACTACCTTGCACGCCTGATGCTAGGCGAGCAGGCCATTTACGGCCTGCGCAAGGTTAAGGAACACCTGCCGGACTCACCCTGGTCAATCCACAGCGCACCACGCCACCTGATCTTCCCAAGTACGACCATGGACCCCAAAGACAGGGTGATAACAGCGTCCTCTGTCACCGTTGAGAACGAATGGGTTACCTACATCTGGAATGGCTCGGATTGGGTACAGGTTGCTACGGCACCTGATGATCAAG... | 72,981 |
KT946731.1 | Rodent astrovirus | To,K.K.W., Chan,W.M., Li,K.S.M., Lam,C.S.F., Chen,Z., Tse,H., Lau,S.K.P., Woo,P.C.Y., Yuen,K.Y. | The University of Hong Kong, Microbiology | Hong Kong | 2017-12-19 | HK-CWRN1RV | Rodent astrovirus | Mamastrovirus | Astroviridae | ssRNA(+) | 6,840 | GenBank | 1 | Hong Kong | Hong Kong | Rattus norvegicus | null | null | null | null | Rodent astrovirus isolate HK-CWRN1RV, complete genome | CCAATAGACCCTGGCCATGGCCGCTTTTAAGCGTGTCTTTGCCTCCCGCGTTGACGCGGCAGTGAATGCCGGCAACTACCTTGCCCGCCTGATGCTAGGCGAGCAGGCTATTTATAGCCTGCGCAAGGTTAAGGAACACCTGCCGGATTCACCCTGGTCAATACACAGTGCCCCTCGCTGGCTTGTGTACCCCAGCACCACCATGGACCCAAAGGACAGGATAATTACAGCCTCATCCGTCACAGTAAGCAATGAATGGGTAACCTATGTGTGGGAGAACAATGACTGGGTTCAGGTAGCCACCGCTCCTGACGACCAGG... | 72,982 |
KT946732.1 | Rodent astrovirus | To,K.K.W., Chan,W.M., Li,K.S.M., Lam,C.S.F., Chen,Z., Tse,H., Lau,S.K.P., Woo,P.C.Y., Yuen,K.Y. | The University of Hong Kong, Microbiology | Hong Kong | 2017-12-19 | HK-1797F | Rodent astrovirus | Mamastrovirus | Astroviridae | ssRNA(+) | 6,241 | GenBank | 1 | Hong Kong | Hong Kong | Rattus andamanensis | null | null | null | null | Rodent astrovirus isolate HK-1797F, complete genome | CCAAGAAGGGTGGTGGCGTGTGTCTCCTGGCACAGAAGAAGAAAATGTACGTCAATTTAGTAGACCGTGCCTGCGATGCCGGCAATCAACGTGCTCGCATGGACTTGGAAGCTAATGCCTTCATCCAATTAGATCGGATGTCTGAAACTCCTTTGCCTTGGCATTTCTCAGCTCCTCTGCGCCATGTGATTTACCCTGGCCCAATTTCACAACAGCGGGTCATTGTGGCTTCAACGGTGCTTGAGGATGAGTGGTGCTCGTATGTATGGGATGGTGAGGCGTGTGTTTGGATTAGAGTTCCTGCTTCGCCTGAGAATCAA... | 72,983 |
KT946733.1 | Rodent astrovirus | To,K.K.W., Chan,W.M., Li,K.S.M., Lam,C.S.F., Chen,Z., Tse,H., Lau,S.K.P., Woo,P.C.Y., Yuen,K.Y. | The University of Hong Kong, Microbiology | Hong Kong | 2017-12-19 | HK-1893F | Rodent astrovirus | Mamastrovirus | Astroviridae | ssRNA(+) | 6,242 | GenBank | 1 | Hong Kong | Hong Kong | Rattus andamanensis | null | null | null | null | Rodent astrovirus isolate HK-1893F, complete genome | CCAAGAAGGGTGGTGGCGTGTGTCTCCTGGCACAGAAGAAGAAAATGTACGTTAATTTAGTAGACCGTGCCTGCGATGCCGGCAATCAACGTGCTCGCATGGACTTGGAAGCTAATGCCTTCATCCAATTAGATCGGATGTCTGAAACTCCTTTGCCTTGGCATTTCTCAGCTCCTCTGCGCCATGTGATTTACCCTGGCCCAATTTCACAACAGCGGGTCATTGTGGCTTCAACGGTGCTTGAGGATGAGTGGTGCTCGTATGTATGGGATGGTGAGGCGTGTGTTTGGATTAGAGTTCCTGCTTCGCCTGAGAATCAA... | 72,984 |
KT946734.1 | Rodent astrovirus | To,K.K.W., Chan,W.M., Li,K.S.M., Lam,C.S.F., Chen,Z., Tse,H., Lau,S.K.P., Woo,P.C.Y., Yuen,K.Y. | The University of Hong Kong, Microbiology | Hong Kong | 2017-12-19 | HK-1998F | Rodent astrovirus | Mamastrovirus | Astroviridae | ssRNA(+) | 6,243 | GenBank | 1 | Hong Kong | Hong Kong | Rattus andamanensis | null | null | null | null | Rodent astrovirus isolate HK-1998F, complete genome | CCAAGAAGGGTGGTGGCGTGTGTCTCCTGGCACAGAAGAAGAAAATGTACGTTAATTTAGTAGACCGTGCCTGCGATGCCGGCAATCAACGTGCTCGCATGGACTTGGAAGCTAATGCCTTCATCCAATTAGATCGGATGTCTGAAACTCCTTTGCCTTGGCATTTCTCAGCTCCTCTGCGCCATGTGATTTACCCTGGCCCAATTTCACAACAGCGGGTCATTGTGGCTTCAACGGTGCTTGAGGATGAGTGGTGCTCGTATGTATGGGATGGTGAGGCGTGTGTTTGGATTAGAGTTCCTGCTTCGCCTGAGAATCAA... | 72,985 |
KT946735.1 | Rodent astrovirus | To,K.K.W., Chan,W.M., Li,K.S.M., Lam,C.S.F., Chen,Z., Tse,H., Lau,S.K.P., Woo,P.C.Y., Yuen,K.Y. | The University of Hong Kong, Microbiology | Hong Kong | 2017-12-19 | HN-014 | Rodent astrovirus | Mamastrovirus | Astroviridae | ssRNA(+) | 6,813 | GenBank | 1 | China | China | Rattus norvegicus | null | null | null | null | Rodent astrovirus isolate HN-014, complete genome | GCAGCAGTCAATGCTGGCAACTATGCAACTCGCCTACAGCTGAGTGAGCAACACCTCTATAAGCTTAGGCAGATATCTGAACACATGCTGAATGCCCCCTGGTCGATCCACTCACCACCACGGACTATGATCTACCCTGGACCGGATGTCTACCCCCCTGTGCGGGTGACAACTGCATCATCGGTAACGGTTAATAATGAGTGGGTGACATACGTCCTGGATGGGGATGACTGGGTACAATGTGTAACTGCCCCTGATGACCAGAATGTGATCTTGGTTTGTGCACTTCTTAATGACAATAACCGCCTGAAACGCGAGAT... | 72,986 |
KT946736.1 | Rodent astrovirus | To,K.K.W., Chan,W.M., Li,K.S.M., Lam,C.S.F., Chen,Z., Tse,H., Lau,S.K.P., Woo,P.C.Y., Yuen,K.Y. | The University of Hong Kong, Microbiology | Hong Kong | 2017-12-19 | GX-006 | Rodent astrovirus | Mamastrovirus | Astroviridae | ssRNA(+) | 6,861 | GenBank | 1 | China | China | Rattus norvegicus | null | null | null | null | Rodent astrovirus isolate GX-006, complete genome | GCAGCAGTCAATGCTGGCAACTATGCAACTCGCCTACAGCTGAGTGAGCAACATCTCTACAAGCTTAGGCAAATACCTGAACACATGTTGAATGCCCCCTGGTCTATCCATTCACCACCACGGACTATGATCTACCCTGGACCGGATGCCTATCCCCCTGTACGGGTGACAACTGCTTCATCGGTAACGGTCGACAATGAATGGGTAACGTATGTTCTGGATGGTGACGACTGGGTACAATGTGTGACTGCCCCTGATGACCAGAATGTGATCTTGGTTTGTGCACTTCTTAATGATAATAACCGCCTAAAACGCGAAAT... | 72,987 |
NC_077012.1 | Rodent bocavirus | de Souza,W.M., Dennis,T., Fumagalli,M.J., Araujo,J., Sabino-Santos,G., Maia,F.G., Acrani,G.O., Carrasco,A.O., Romeiro,M.F., Modha,S., Vieira,L.C., Ometto,T., Queiroz,L.H., Durigon,E.L., Nunes,M.R., Figueiredo,L.T., Gifford,R.J., Dennis,T.P., de Araujo,J., Sabino-Santos,G. Jr., Motta Maia,F.G., Nunes,M.R.T., Murcia,P.R.... | National Center for Biotechnology Information, NIH | USA | 2023-05-04 | 1 | Rodent bocavirus | Bocaparvovirus | Parvoviridae | ssDNA(+/-) | 5,227 | RefSeq | 1 | Brazil | Brazil | Necromys lasiurus | blood | 2008 | null | PRJNA485481 | Rodent bocavirus isolate 1 nonstructural protein 1 (QKT93_gp1), NP1 protein (QKT93_gp2), and capsid protein 1 (QKT93_gp3) genes, complete cds | GCGCATGCGCAGACAATCAAACATGGAGTCATGGTAGTCCATAAAGATTATATCATTATGTGGGCATGTCCGGGCATGCGCGGTCATACCGGAAACAAGAATAATGCTGAGTAACCGGAAGTCCTTGAACCGGTCATCATGTAATATTTTAATAGGTAATCTTTGTGGGTGGAGCTTTGTATATAAAAGGACCTCGCACACTTGCTCGGCGCCATTTCGTCCTTTTCTTTTGGAAGAGAACGACGCTCTCAATAGCGGTGGTGAGTACAACATGCCTTTGATCAACTTCCAAGCTGCCTTTGAAGGATTTGGAGGAATCG... | 746 |
KY927867.1 | Rodent bocavirus | Zhang,C., Song,F., Xiu,L., Liu,Y., Yang,J., Yao,L., Peng,J. | Institute of Pathogen Biology, Chinese Academy of Medical Sciences & Peking Union Medical College, MOH Key Laboratory of Systems Biology of Pathogens | China | 2018-04-14 | DLS8 | Rodent bocavirus | Bocaparvovirus | Parvoviridae | ssDNA(+/-) | 5,136 | GenBank | 1 | China | China | Rattus norvegicus | lung | 2012-08-08 | null | null | Rodent bocavirus isolate DLS8, complete genome | GATATAAGCAACGCGCATGCGCATACAACATGGAGTCCTAGTGGTGAAATAAAGTTATAACAATACAAAATGAATATGTAATGTGACGTCATATCCAGACATGCGCACTTTCTTATGCGGAAATAAAATTGCTCAGTCATCGGAAGAACCTTGAAAGGGTAACGTGTAATATTTAATAAGTTACTAAATGGGTGGAGTTATGAACTGTATAAAAGACAAGAACACTAGTTCTCTTCCTCTTTCTTCGCACTCGCAGAAAGACTGTCAGCATCGGCACAGCGCAATCAACCTGGTGGTGAGTAACCATGCCTCTGATCAAC... | 71,226 |
KY927868.1 | Rodent bocavirus | Zhang,C., Song,F., Xiu,L., Liu,Y., Yang,J., Yao,L., Peng,J. | Institute of Pathogen Biology, Chinese Academy of Medical Sciences & Peking Union Medical College, MOH Key Laboratory of Systems Biology of Pathogens | China | 2018-04-14 | DLS9 | Rodent bocavirus | Bocaparvovirus | Parvoviridae | ssDNA(+/-) | 5,138 | GenBank | 1 | China | China | Rattus norvegicus | lung | 2012-08-09 | null | null | Rodent bocavirus isolate DLS9, complete genome | CGATATAAGCAACGCGCATGCGCATACAACATGGAGTCCTAGTGGTGAAATAAAGTTATAACAATACAAAATGAATATGTAATGTGACGTCATATCCAGACATGCGCACTTTCTTATGCGGAAATAAAATTGCTCAGTCATCGGAAGAACCTTGAAAGGGTAACGTGTAATATTTAATAAGTTACTAAATGGGTGGAGTTATGAACTGTATAAAAGACAAGAACACTAGTTCTCTTCCTCTTTCTTCGCACTCGCAGAAAGACTGTCAGCATCGGCACAGCGCAATCAACCTGGTGGTGAGTAACCATGCCTCTGATCAA... | 71,227 |
KY927869.1 | Rodent bocavirus | Zhang,C., Song,F., Xiu,L., Liu,Y., Yang,J., Yao,L., Peng,J. | Institute of Pathogen Biology, Chinese Academy of Medical Sciences & Peking Union Medical College, MOH Key Laboratory of Systems Biology of Pathogens | China | 2018-04-14 | DLS16 | Rodent bocavirus | Bocaparvovirus | Parvoviridae | ssDNA(+/-) | 5,140 | GenBank | 1 | China | China | Rattus norvegicus | lung | 2012-11-02 | null | null | Rodent bocavirus isolate DLS16, complete genome | GGCGGGGGCGATATAAGCAACGCGCATGCGCATACAACATGGAGTCCTAGTGGTGAAATAAAGTTATAACAATACAAAATGAATATGTAATGTGACGTCATGTCCGGACATGCGCACTCTCTTATGCGGAAATAAAATTGCTCAGTCATCGGAAGAACCTTGAAAGGGTAACGTGTAATATTTAATAAGTTACTAAATGGGTGGAGTTATGAACTGTATAAAAGACAAGAACACTAGTTCTCTTCCTCTTTCTTCGCACTCGCAGAAAGACTGTCAGCATCGGCACAGCGCAATCAACCTGGTGGTGAGTAGCCATGCCT... | 71,228 |
KY927870.1 | Rodent bocavirus | Zhang,C., Song,F., Xiu,L., Liu,Y., Yang,J., Yao,L., Peng,J. | Institute of Pathogen Biology, Chinese Academy of Medical Sciences & Peking Union Medical College, MOH Key Laboratory of Systems Biology of Pathogens | China | 2018-04-14 | ZM14 | Rodent bocavirus | Bocaparvovirus | Parvoviridae | ssDNA(+/-) | 5,118 | GenBank | 1 | China | China | Rattus flavipectus | lung | 2014-02-17 | null | null | Rodent bocavirus isolate ZM14, complete genome | GGATATAAGCAACGCGCATGCGCATAAAACATGGAGTCCTAGTGGTGAACTAAAGTTATAACAATATGATATTGAATATATAATGTGACGTCATATCCTGTCATGCGCATAGCCGCATGCGGAACTAAAACTGCTCGGTCATCGGAAGAACCTTGAAAGGGCACTGTGTAATATTTAATAAGTTACTAAATGGGTGGAGTTTTAGACTGTATAAAAAGAGAGGACACCAGTTCTCTTCCTCTTTCTTCGCATTCGCAGAAAGACTGTCCGCATCAGCACAGCGCAATCAACCTGGTGGTGAGTAACCATGCCTCTGAACA... | 71,229 |
KY927871.1 | Rodent bocavirus | Zhang,C., Song,F., Xiu,L., Liu,Y., Yang,J., Yao,L., Peng,J. | Institute of Pathogen Biology, Chinese Academy of Medical Sciences & Peking Union Medical College, MOH Key Laboratory of Systems Biology of Pathogens | China | 2018-04-14 | ZM37 | Rodent bocavirus | Bocaparvovirus | Parvoviridae | ssDNA(+/-) | 5,116 | GenBank | 1 | China | China | Rattus rattus | lung | 2014-07-14 | null | null | Rodent bocavirus isolate ZM37, complete genome | ATAAGCAACGCGCATGCGCATACAACATGGAGTCCTAGTGGTGAAATAAAGTTATAACAATACAAAATGGATATGTAATGTGACGTCATATCCGGACATGCGCACTTTCTTATGCGGAAATAAAATTGCTCAGTCATCGGAAGAACCTTGAAAGGGTATCGTGTAATATTTAATAAGTTACTAAATGGGTGGAGTTATGAACTGTATAAAAGACGAGAACACCAGTTCTCTTTCTCTTTCTTCGCATTCGCAGAAAGACTGTCAGCATCGGCACAGCGCAATCAACCTGGTGGTGAGTAACCATGCCTCTGATCAACTTT... | 71,230 |
KY927872.1 | Rodent bocavirus | Zhang,C., Song,F., Xiu,L., Liu,Y., Yang,J., Yao,L., Peng,J. | Institute of Pathogen Biology, Chinese Academy of Medical Sciences & Peking Union Medical College, MOH Key Laboratory of Systems Biology of Pathogens | China | 2018-04-14 | ZM71 | Rodent bocavirus | Bocaparvovirus | Parvoviridae | ssDNA(+/-) | 5,110 | GenBank | 1 | China | China | Rattus norvegicus | lung | 2014-07-14 | null | null | Rodent bocavirus isolate ZM71, complete genome | AAGCAACGCGCATGCGCATAAAACATGGAGTCCTAGTGGTGAACTAAAGTTATAACAATATGATATTGAATACATAATGTGACGTCATATCCTGTCATGCGCATAGCCGCATGCGGAACTAAAACTGCTCGGTCATCGGAAGAACCTTGAAAGGGCACTGTGTAATATTTAATAAGTTACTAAATGGGTGGAGTTTTAGACTGTATAAAAAGAGAGGACACCAGTTCTCTTCCTCTTTCTTCGCATTCGCAGAAAGACTGTCCGCATCAGCACAGCGCAATCAACCTGGTGGTGAGTAACCATGCCTCTGAACAACTTTC... | 71,231 |
NC_021153.1 | Rodent hepacivirus | Kapoor,A., Simmonds,P., Scheel,T.K., Hjelle,B., Cullen,J.M., Burbelo,P.D., Chauhan,L.V., Duraisamy,R., Sanchez Leon,M., Jain,K., Vandegrift,K.J., Calisher,C.H., Rice,C.M., Lipkin,W.I. | National Center for Biotechnology Information, NIH | USA | 2013-05-01 | RHV-339 | Rodent hepacivirus | Hepacivirus | Flaviviridae | ssRNA(+) | 8,879 | RefSeq | 1 | USA | USA | Peromyscus maniculatus | blood | 2008 | null | PRJNA485481 | Rodent hepacivirus, complete genome | ACCATCTACACTCCCCGTTCCAGGGATTCCCAGCGTGCTAGGGTGGCACGTATCTGCTCCGTTTACATTATTTGAGCAGGGCTGGGGAACTGAATGGCACCGGTGTGGCACCGCTATTGCGCTGCGTGACCGGGTTGGCTGGAGTCTCAGTCTCTCCATGCGGGCCTGGACGGACCACAGGGGAGGGGAGAGAGCAACTGAAAGTGTATCCATGAGTACATGGAGCGCTGCAGCGAGCGCACATCTACCACGCTTCGGCCTGGCTAAGATGGTTGGTAGCCGCCTATATGGTACTGCAGTAGGGTATACCCGCACTGGAG... | 6,964 |
MW417366.1 | Rodent hepacivirus | Prestes,N.G.O., Silva,S.P., Cruz,A.C.R. | Evandro Chagas Institute, Department of Arbovirology and Hemorrhagic Fevers | Brazil | 2022-05-11 | null | Rodent hepacivirus | Hepacivirus | Flaviviridae | ssRNA(+) | 8,372 | GenBank | null | Brazil: Viseu city, Para state | Brazil | Proechimys sp. | liver, abdominal cavity | 2014 | null | null | Rodent hepacivirus strain RO22799/BeAn812052, complete genome | CCACTGCCTGATAGGGTCTTTGGCACAGTCCAGGGAGTTATGTGCCTATCTACTTTTTATGGCTTGTTTCAACCCCTTCTTTTTCTCTTTCTTGACCATGTTTGACGTCTTGCGATTTTGTACTTTTGAAGTTGGAACCGGCAGACCTCGCGGTAAGGTCGTTGGAGGGGTGTACATTCGTACACCCAAGAAGACGGTGGACCGCGGGCAGCCACGCAAACGTAGGCCGAGGCGTGACCAAGGAGCTTGGAGGAGGTCGCCTCTAGGCCCCATGGACCCCTACGTGCGCATGGCAGCTCAAACCGTCTTACCTGCAGCCT... | 30,816 |
MN555567.1 | Rodent hepacivirus | Bletsa,M., Vrancken,B., Gryseels,S., Boonen,I., Fikatas,A., Li,Y., Laudisoit,A., Lequime,S., Bryja,J., Makundi,R., Meheretu,Y., Akaibe,B.D., Mbalitini,S.G., Van de Perre,F., Van Houtte,N., Tesikova,J., Wollants,E., Van Ranst,M., Drexler,J.F., Verheyen,E., Leirs,H., de Bellocq,J.G., Lemey,P., Gouy de Bellocq,J. | Rega Institute, KU Leuven, Department of Microbiology, Immunology and Transplantation | Belgium | 2020-11-18 | TZ25757/TZA/2011 | Rodent hepacivirus | Hepacivirus | Flaviviridae | ssRNA(+) | 9,154 | GenBank | null | Tanzania | Tanzania | Acomys wilsoni | null | 2011 | null | null | Rodent hepacivirus isolate TZ25757/TZA/2011, complete genome | CCAGCCCCGGACGGGTGTCTGCGGGTAGTAAGTTTCTCACTCCATTTTCCTTAGAAACTTACCGCTGGCGGTTGCAATGGCACTTGCGTGGGACGCTTAGGCCTCCGTGGCAAGGTTGGTCGTAGTCTGTGACCGTTAGTGGGCCCCTGAGGACCGATAACCCGGGAGAGGGCAACTGGAAGCGTGGCCCTGAGTACAGGGCCTAGGCGGGATGAGCGCAGCGGTACTACGTGCTTGCACCTAGTGATGCCGTGTGGTAGCCTCCTTTATGGTACCCGCCGAGGACATGTCCGCGTGGAAGGGGGAGGGTGTTGGGTCGC... | 45,748 |
MN564789.1 | Rodent hepacivirus | Bletsa,M., Vrancken,B., Gryseels,S., Boonen,I., Fikatas,A., Li,Y., Laudisoit,A., Lequime,S., Bryja,J., Makundi,R., Meheretu,Y., Akaibe,B.D., Mbalitini,S.G., Van de Perre,F., Van Houtte,N., Tesikova,J., Wollants,E., Van Ranst,M., Drexler,J.F., Verheyen,E., Leirs,H., de Bellocq,J.G., Lemey,P., Gouy de Bellocq,J. | Rega Institute, KU Leuven, Department of Microbiology, Immunology and Transplantation | Belgium | 2020-11-13 | CRT682/COD/2010 | Rodent hepacivirus | Hepacivirus | Flaviviridae | ssRNA(+) | 8,905 | GenBank | null | Democratic Republic of the Congo | Democratic Republic of the Congo | null | null | 2010 | null | null | Rodent hepacivirus isolate CRT682/COD/2010, complete genome | ACTCCATGCATGACACTCCCCTGTTGGAGTAATGGGGCCTTGGCCGACCTCTCCTCGACGGGGGACAGTAGGACACGGTTGCGAAAGCCTTCCATTTCTGGGGCACCGGTCCAGAGGTGTGGGACGACCCTAAGGGAATTGGGTCCTCCGTGACTTCGTTGGGACTGTCCAGGATGGATGCCACCAACAGGAAAAAAACTAGTGGAAGAGGTTCGTAAGGGTACCGGAAGTCGGAGTACCGACAAGGCACGGTGGTGGCACACTTCGGTCTGCGTGCACCGGTTGGTCTTGGTCATGTACCCCGGATACCTAGGGGTAGG... | 45,955 |
MN564790.1 | Rodent hepacivirus | Bletsa,M., Vrancken,B., Gryseels,S., Boonen,I., Fikatas,A., Li,Y., Laudisoit,A., Lequime,S., Bryja,J., Makundi,R., Meheretu,Y., Akaibe,B.D., Mbalitini,S.G., Van de Perre,F., Van Houtte,N., Tesikova,J., Wollants,E., Van Ranst,M., Drexler,J.F., Verheyen,E., Leirs,H., de Bellocq,J.G., Lemey,P., Gouy de Bellocq,J. | Rega Institute, KU Leuven, Department of Microbiology, Immunology and Transplantation | Belgium | 2020-11-13 | ETH674/ETH/2012 | Rodent hepacivirus | Hepacivirus | Flaviviridae | ssRNA(+) | 7,848 | GenBank | null | Ethiopia | Ethiopia | Stenocephalemys albipes | null | 2012 | null | null | Rodent hepacivirus isolate ETH674/ETH/2012, complete genome | GCTGTCAGCAATTGCTGCTCTCAGGACCAGGTAGCGTATTGCACTGATGTCACGTGCGTTCACGACACTGGCTGCGCTATATGTGAACAAAAGGGTGATGAGACGATATGTTGGGAACCATCCGGCCTTATGCTGTCGCATGCCCCGAACTACACTGGCGTGGACAGCTTTCTGACAAATCATATTGATTTCGTCGCCGGCACCATATTCGTCTGTGACCTTGCGGGGGTGAAAGAGCTCTGTGGCCTGGCGGTGCTTGCATCCTCTAGTGTCCTAAGCTGGATTCCAACCCCCGTTACGCTTAACACCACAGCAGACTG... | 45,956 |
MN564791.1 | Rodent hepacivirus | Bletsa,M., Vrancken,B., Gryseels,S., Boonen,I., Fikatas,A., Li,Y., Laudisoit,A., Lequime,S., Bryja,J., Makundi,R., Meheretu,Y., Akaibe,B.D., Mbalitini,S.G., Van de Perre,F., Van Houtte,N., Tesikova,J., Wollants,E., Van Ranst,M., Drexler,J.F., Verheyen,E., Leirs,H., de Bellocq,J.G., Lemey,P., Gouy de Bellocq,J. | Rega Institute, KU Leuven, Department of Microbiology, Immunology and Transplantation | Belgium | 2020-11-13 | TA338/TZA/2013 | Rodent hepacivirus | Hepacivirus | Flaviviridae | ssRNA(+) | 9,807 | GenBank | null | Tanzania | Tanzania | Mastomys natalensis | null | 2013 | null | null | Rodent hepacivirus isolate TA338/TZA/2013, complete genome | GGCTTGCCGAGGCAAGCCGAAGTGTCCCAGTGTGCCTGGGAACAGCAATCCTAAGGCCATCCTCCTTTTAGAATGAACCTTAAAGAATGTAGGTGCGGCGAAGCCCGAAACGCGGGAGTGCTAGGGTTGCGAAGGTGCGTAAATCCCAGCTCCCTCTACGTTCGGGAATAAGTCGCGCCGAACCTCTGGCGGGCTCGGACGACCGGATGTGTTGGCTATGGTGTAGCTGATCACAGGTTTGGGGGTACCGGTGCGAATAACCCCTCGACAGGGTCAGCTGTCGTAAAACTCAGGACTGAGCATTGGCTGGCTGGCGGTTT... | 45,957 |
MN564792.1 | Rodent hepacivirus | Bletsa,M., Vrancken,B., Gryseels,S., Boonen,I., Fikatas,A., Li,Y., Laudisoit,A., Lequime,S., Bryja,J., Makundi,R., Meheretu,Y., Akaibe,B.D., Mbalitini,S.G., Van de Perre,F., Van Houtte,N., Tesikova,J., Wollants,E., Van Ranst,M., Drexler,J.F., Verheyen,E., Leirs,H., de Bellocq,J.G., Lemey,P., Gouy de Bellocq,J. | Rega Institute, KU Leuven, Department of Microbiology, Immunology and Transplantation | Belgium | 2020-11-13 | TA132/TZA/2013 | Rodent hepacivirus | Hepacivirus | Flaviviridae | ssRNA(+) | 9,802 | GenBank | null | Tanzania | Tanzania | Praomys jacksoni | null | 2013 | null | null | Rodent hepacivirus isolate TA132/TZA/2013, complete genome | TTGCCGAGGCAAGCCGAAGTGTCCCAGTGTGCCTGGGAACAGCAATCCTAAGGCCATCCTCCTTTTAGAATGAACCTTAAAGAATGTAGGTGCGGCGAAGCCCGAAACGCGGGAGTGCTAGGGTTGCGAAGGTGCGTAAATCCCAGCTCCCTCTACGTTCGGGAATAAGTCGCGCCGAACCTCTGGCGGGCTCGGACGACCGGATGTGTTGGCTATGGTGTAGCTGATCACAGGTTTGGGGGTACCGGTGCGAATAACCCCTCGACAGGGTCAGCTGTCGTAAAACTCAGGACTGAGCATTGGCTGGCTGGCGGTTTGGC... | 45,958 |
MN564793.1 | Rodent hepacivirus | Bletsa,M., Vrancken,B., Gryseels,S., Boonen,I., Fikatas,A., Li,Y., Laudisoit,A., Lequime,S., Bryja,J., Makundi,R., Meheretu,Y., Akaibe,B.D., Mbalitini,S.G., Van de Perre,F., Van Houtte,N., Tesikova,J., Wollants,E., Van Ranst,M., Drexler,J.F., Verheyen,E., Leirs,H., de Bellocq,J.G., Lemey,P., Gouy de Bellocq,J. | Rega Institute, KU Leuven, Department of Microbiology, Immunology and Transplantation | Belgium | 2020-11-13 | TA142/TZA/2013 | Rodent hepacivirus | Hepacivirus | Flaviviridae | ssRNA(+) | 9,853 | GenBank | null | Tanzania | Tanzania | Praomys jacksoni | null | 2013 | null | null | Rodent hepacivirus isolate TA142/TZA/2013, complete genome | GCGCTTCCGATCTCGAAAGGGCGTGCCGCACTAGGCTTGCTGAGGCAAGCCGAAGTGTCCCAGTGTGCCTGGGAACAGCAATCCTAAGGCCATCCTCCTTTTAGAATGAACCTTAAAGACTGTAGGTGCGGCGAAGCCCGAAACGCGGGAGTGCTAGGGTTGCGAAGGTGCGTAAATCCCAGCTCCCTCTACGTTCGGGAATAAGTCGCGCCGAACCTCTGGCGAGTTCGGACGACCGGATGTGTTGGCTATGGTGTAGCTGATCACAGGTTTGGGGGTACCGGTGTGAATAACCCCTCGACAGGGTCAGCTGTCGTAAA... | 45,959 |
MN564794.1 | Rodent hepacivirus | Bletsa,M., Vrancken,B., Gryseels,S., Boonen,I., Fikatas,A., Li,Y., Laudisoit,A., Lequime,S., Bryja,J., Makundi,R., Meheretu,Y., Akaibe,B.D., Mbalitini,S.G., Van de Perre,F., Van Houtte,N., Tesikova,J., Wollants,E., Van Ranst,M., Drexler,J.F., Verheyen,E., Leirs,H., de Bellocq,J.G., Lemey,P., Gouy de Bellocq,J. | Rega Institute, KU Leuven, Department of Microbiology, Immunology and Transplantation | Belgium | 2020-11-13 | TA152/TZA/2013 | Rodent hepacivirus | Hepacivirus | Flaviviridae | ssRNA(+) | 9,826 | GenBank | null | Tanzania | Tanzania | Praomys jacksoni | null | 2013 | null | null | Rodent hepacivirus isolate TA152/TZA/2013, complete genome | GAAAGGGGCGTGCCGCACTAGGCTTGCCGAGGCAAGCCGAAGTGTCCCAGTGTGCCTGGGAACAGCAATCCTAAGGCCATCCTCCTTTTAGAATGAACCTTAAAGAATGTAGGTGCGGCGAAGCCCGAAACGCGGGAGTGCTAGGGTTGCGAAGGTGCGTAAATCCCAGCTCCCTCTACGTTCGGGAATAAGTCGCGCCGAACCTCTAGCGGGCTCGGACGACCGGATGTGTTGGCTATGGTGTAGCTGATCACAGGTTTGGGGGTACCGGTGAGAATAACCCCTCGACAGGGTCAGCTGTCGTAAAACTTAGGACTGAG... | 45,960 |
MG822666.1 | Rodent hepacivirus | Schmid,J., Rasche,A., Eibner,G., Jeworowski,L., Page,R.A., Corman,V.M., Drosten,C., Sommer,S. | Charite - Universitaetsmedizin Berlin, Institute of Virology | Germany | 2018-07-03 | B349/PAN/2014 | Rodent hepacivirus | Hepacivirus | Flaviviridae | ssRNA(+) | 8,563 | GenBank | 1 | Panama | Panama | Proechimys semispinosus | null | 2014 | null | null | Rodent hepacivirus isolate B349/PAN/2014, complete genome | CTACTGCCTGATAGGGTCGTTTTCCAAGCGCCCTGGGACGTCTCTTGGATATTTACTTTTATGGCTTGTTTCACTTCTTTCCTTGCTTTGTTCAACGTTATCGAGCTTGTCACATGTCATATCGGAACTGGTCGCCCACGTGGAAAGGTCGTAGGAGGGGTTTACATCCGTAACCCCAAGAAGACAGTTGACCCAGGCCAGAAGCGGAAGCGACGCAACAGGAGAGACCAGGGTGCCTGGCGCAGGTCAGCGATAGGCCCCATGGACCCTTACGCTCGCACCGCTATGCAGGCTGTTCTTCCATCTGCTGCGTATCCTCC... | 70,161 |
NC_075016.1 | Ross River virus | Jones,A., Lowry,K., Aaskov,J., Holmes,E.C., Kitchen,A. | National Center for Biotechnology Information, NIH | USA | 2023-05-04 | null | Ross River virus | Alphavirus | Togaviridae | ssRNA(+) | 11,948 | RefSeq | 1 | Australia: northeast | Australia | Homo sapiens | null | 2004 | null | PRJNA485481 | Ross River virus strain QML 1, complete genome | AATGGCGGACGTGTGACATCACCGTTCGCCTTTCTTGGATCCCTTGTTACTCCACATAGTGAGAGATAAACAACCCAGAATGAAGGTCACTGTAGATGTTGAGGCTGATAGCCCATTTTTGAAGGCCCTTCAGAAAGCATTCCCGGCTTTTGAGGTTGAATCACAGCAGGTCACACCTAATGACCATGCTAATGCCAGAGCCTTTTCGCATCTGGCCACAAAGTTAATTGAACAAGAGGTTCCAACCAACATCACCATCCTGGACGTGGGCAGCGCGCCCGCAAGGAGGTTGATGTCTGACCACAGCTACCATTGCGTTT... | 306 |
NC_001544.1 | Ross River virus | Faragher,S.G., Meek,A.D., Rice,C.M., Dalgarno,L. | National Center for Biotechnology Information, NIH | USA | 1993-08-03 | null | Ross River virus | Alphavirus | Togaviridae | ssRNA(+) | 11,657 | RefSeq | 1 | null | null | null | null | null | null | PRJNA485481 | Ross River virus, complete genome | NNTGGCGGACGTGTGACATCACCGTTCGCCTTTCTTGGATCCCTTGTTACTCCACCGCAGTGAGAGATAAACAACCCAGAATGAAGGTCACTGTAGATGTTGAGGCTGACAGCCCATTTTTGAAGGCCCTTCAGAAAGCATTCCCGGCTTTTGAGGTTGAATCACAGCAGGTCACACCTAATGACCATGCTAATGCCAGAGCTTTTTCGCATCTGGCCACAAAGTTAATTGAACAAGAGGTTCCAGCCAACATCACCATCCTGGACGTGGGCAGTGCGCCCGCAAGGAGGTTGATGTCTGACCACAGCTACCATTGCATT... | 8,962 |
MW517834.1 | Ross River virus | Mee,P.T., Lynch,S.E. | Agriculture Victoria Research, Microbial Sciences, Pests, and Diseases | Australia | 2022-05-25 | ARBO231 | Ross River virus | Alphavirus | Togaviridae | ssRNA(+) | 11,854 | GenBank | null | Australia: Wellington, Victoria | Australia | Ochlerotatus camptorhynchus | null | 2017-01-09 | null | null | Ross River virus isolate ARBO231, complete genome | GTGACATCACCGTTCGCCTTTCTTGGATCCCTTGTTACTCCACACAGTGAGAGATAAACAACCCAGAATGAAGGTCACTGTAGATGTTGAGGCTGATAGCCCATTTTTGAAGGCCCTTCAGAAAGCATTCCCTGCTTTTGAGGTTGAATCACAGCAGGTCACACCTAATGACCATGCTAATGCCAGAGCCTTTTCGCATCTGGCTACAAAGTTAATTGAACAAGAGGTTCCAACCAACATCACCATCCTGGACGTGGGCAGCGCGCCCGCAAGGAGGTTGATGTCTGACCACAGCTACCATTGCATTTGTCCCATGAAGA... | 30,574 |
MW517835.1 | Ross River virus | Mee,P.T., Lynch,S.E. | Agriculture Victoria Research, Microbial Sciences, Pests, and Diseases | Australia | 2022-05-25 | ARBO232 | Ross River virus | Alphavirus | Togaviridae | ssRNA(+) | 11,930 | GenBank | null | Australia: Gannawarra, Victoria | Australia | Ochlerotatus camptorhynchus | null | 2017-01-16 | null | null | Ross River virus isolate ARBO232, complete genome | GGACGTGTGACATCACCGTTCGCCTTTCTTGGATCCCTTGTTACTCCACACAGTGAGAGATAAACAACCCAGAATGAAGGTCACTGTAGATGTTGAGGCTGATAGCCCATTTTTGAAGGCCCTTCAGAAAGCATTCCCTGCTTTTGAGGTTGAATCACAGCAGGTCACACCTAATGACCATGCTAATGCCAGAGCCTTTTCGCATCTGGCTACAAAGTTAATTGAACAAGAGGTTCCAACCAACATCACCATCCTGGACGTGGGCAGCGCGCCCGCAAGGAGGTTGATGTCTGACCACAGCTACCATTGCATTTGTCCCA... | 30,575 |
MW517836.1 | Ross River virus | Mee,P.T., Lynch,S.E. | Agriculture Victoria Research, Microbial Sciences, Pests, and Diseases | Australia | 2022-05-25 | ARBO235 | Ross River virus | Alphavirus | Togaviridae | ssRNA(+) | 11,947 | GenBank | null | Australia: Seaford, Victoria | Australia | Ochlerotatus camptorhynchus | null | 2017-01-19 | null | null | Ross River virus isolate ARBO235, complete genome | GATGGCGGACGTGTGACATCACCGTTCGCCTTTCTTGGATCCCTTGTTACTCCACACAGTGAGAGATAAACAACCCAGAATGAAGGTCACTGTAGATGTTGAGGCTGATAGCCCATTTTTGAAGGCCCTTCAGAAAGCATTCCCTGCTTTTGAGGTTGAATCACAGCAGGTCACACCTAATGACCATGCTAATGCCAGAGCCTTTTCGCATCTGGCCACAAAGTTAATTGAACAAGAGGTTCCAACCAACATCACCATCCTGGACGTGGGCAGCGCGCCCGCAAGGAGGTTGATGTCTGACCACAGCTACCATTGCATTT... | 30,576 |
MW489504.1 | Ross River virus | Mee,P.T., Lynch,S.E., M,P.T. | Agriculture Victoria Research, Microbial Sciences, Pests & Diseases | Australia | 2022-05-14 | ARBO012 | Ross River virus | Alphavirus | Togaviridae | ssRNA(+) | 11,624 | GenBank | null | Australia: Wellington, Victoria | Australia | Ochlerotatus camptorhynchus | null | 2013-11-11 | null | null | Ross River virus isolate ARBO012, complete genome | GTACTGGTCGGTGACTTAATCAACCCTCCTTTCCACATGGCGGACGTGTGACATCACCGTTCGCCTTTCTTGGATCCCTTGTTACTCCACATAGTGAGAGATAAACAACCCAGAATGAAGGTCACTGTAGATGTTGAGGCTGATAGCCCATTTTTGAAGGCCCTTCAGAAAGCATTCCCGGCTTTTGAGGTTGAATCCCAGCAGGTCACACCTAATGACCATGCTAATGCCAGAGCCTTTTCGCATCTGGCCACAAAGTTAATTGAACAAGAGGTTCCAACCAACATCACCATCCTGGACGTGGGCAGCGCGCCCGCAAG... | 30,801 |
MW489505.1 | Ross River virus | Mee,P.T., Lynch,S.E., M,P.T. | Agriculture Victoria Research, Microbial Sciences, Pests & Diseases | Australia | 2022-05-14 | ARBO113 | Ross River virus | Alphavirus | Togaviridae | ssRNA(+) | 11,856 | GenBank | null | Australia: Moira, Victoria | Australia | Culex annulirostris | null | 2016-02-09 | null | null | Ross River virus isolate ARBO113, complete genome | GTGACATCACCGTTCGCCTTTCTTGGATCCCTTGTTACTCCACACAGTGAGAGATAAACAACCCAGAATGAAGGTCACTGTAGATGTTGAGGCTGATAGCCCATTTTTGAAGGCCCTTCAGAAAGCATTCCCTGCTTTTGAGGTTGAATCACAGCAGGTCACACCTAATGACCATGCTAATGCCAGAGCCTTTTCGCATCTGGCCACAAAGTTAATTGAACAAGAGGTTCCAACCAACATCACCATCCTGGACGTGGGCAGCGCGCCCGCAAGGAGGTTGATGTCTGACCACAGCTACCATTGCATTTGTCCCATGAAGA... | 30,802 |
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