Accession
stringlengths
8
11
Organism_Name
stringlengths
10
53
Submitters
stringlengths
4
2.42k
⌀
Organization
stringlengths
3
234
⌀
Org_location
stringlengths
3
24
⌀
Release_Date
stringlengths
10
10
Isolate
stringlengths
1
75
⌀
Species
stringlengths
10
53
⌀
Genus
stringlengths
7
22
⌀
Family
stringlengths
10
19
⌀
Molecule_type
stringclasses
14 values
Length
int64
5k
95.4k
Sequence_Type
stringclasses
2 values
Publications
float64
1
134
⌀
Geo_Location
stringlengths
3
88
⌀
Country
stringlengths
3
32
⌀
Host
stringlengths
3
64
⌀
Isolation_Source
stringlengths
3
31
⌀
Collection_Date
stringlengths
4
10
⌀
BioSample
stringlengths
12
14
⌀
BioProject
stringlengths
9
23
⌀
GenBank_Title
stringlengths
22
320
Sequence
stringlengths
5k
95.4k
__index_level_0__
int64
39
112k
NC_077212.1
Yangshan Harbor Nitrososphaeria virus
Zhou,Y.
National Center for Biotechnology Information, NIH
USA
2023-05-04
YSH_174770
Yangshan Harbor Nitrososphaeria virus
null
null
dsDNA
36,856
RefSeq
null
China
China
Nitrososphaeria
null
2018
null
PRJNA485481
Yangshan Harbor Nitrososphaeria virus isolate YSH_174770, complete genome
CAGAAACTGCTCCGCTGTCTATCTGGTCGATGTCTATTGTTATCTCGGCATCATCTGCTAATGCTGAATCTGAAATAACAGGTGCCGTTGCAGCCGTTGTTGAGGTTTTCTCAGTTGCATCTATTGTAATCTTTGTAGAGAGTATTGTAGTTCCTGCTTCGTTAATGTCCACTGTTACGAGATTTGCTCCTGTACCGGCAGTTGTTAATGATGCTCTTACTGCTGTTAATGTAAATGCGAATGGCATACGGAAAGTTGCTTTTGCTGTACCTGCTTCTAGTGCTGTTGTTTCATCTGATGCTGAAATTACAATAGCTTGT...
834
NC_077213.1
Yangshan Harbor Nitrososphaeria virus
Zhou,Y.
National Center for Biotechnology Information, NIH
USA
2023-05-04
YSH_922147
Yangshan Harbor Nitrososphaeria virus
null
null
dsDNA
38,245
RefSeq
null
China
China
Nitrososphaeria
null
2018
null
PRJNA485481
Yangshan Harbor Nitrososphaeria virus isolate YSH_922147, complete genome
CATTAGTAATGAAAGGTGATTCTAAATGAAATTAACAGAATTTAATCTTTACATTAAAGAAACTGAAAAAGATAGTTTTGCTTTATGTATTGAGTTACCTGATAATTCAAGAAATTATATCCATACACAAGATATGATTCTAAATGATTGTCTTATTGCATTAGAAGAATTAAGAGGAAAAACCATAGAAGATGATTGTAATGCACCATACTTAGAAAAAGATGGAACTTATTTCAGAATTAAAATGACAGTAGAACCAAGAGAATTTACATTTTCAGAGAGTTTGTATTTTCATTCAAGAAAGTTGAATCTCAATGATG...
835
ON649698.1
Yangshan Harbor Nitrososphaeria virus
Zhou,Y.
Shanghai Ocean University, College of Food Science and Technology
China
2022-08-27
YSH_1032793
Yangshan Harbor Nitrososphaeria virus
null
null
dsDNA
35,889
GenBank
null
China
China
Nitrososphaeria
null
2018
null
null
Yangshan Harbor Nitrososphaeria virus isolate YSH_1032793, complete genome
CAGAACTCAAGTCAGCAGAACTCAAGTTAGCAGAACTCAAGTCAGCAGAACTCAAGTTAGCATAACTCAAGTCAGCATAACGCAAGTTAGCAGAACTCAAGTCAGCAGAACTCAAGTTAGCAGAACGCAAGTTAGCATAACTCAAGTTAGCATAACTCAAGTTAGCATAACTCAAGTTAGCATAACTCAAGTCAGCATAACGCAAGTTAGCAGAACTCAAGTCAGCATAACGCAAGTTAGCAGAACTCAAGTCAGCAGAACTCAAGTTAGCAGAACGCAAGTCAGCATAACGCAAGTTAGCAGAACTCAAGTTAGCATAA...
26,624
ON649699.1
Yangshan Harbor Nitrososphaeria virus
Zhou,Y.
Shanghai Ocean University, College of Food Science and Technology
China
2022-08-27
YSH_462411
Yangshan Harbor Nitrososphaeria virus
null
null
dsDNA
36,645
GenBank
null
China
China
Nitrososphaeria
null
2018
null
null
Yangshan Harbor Nitrososphaeria virus isolate YSH_462411, complete genome
CTTGTTTTGTGTAATAATAACTTGATTTTCACCCAATCCCCTTAGTCTTTGCTGTTCCCTAGTAAGAAATGGGTTTGCCTCATTTAATATTTCTCTTTTGAAAACTCCCAATATTCTTTTATCTTTTAGTAATTTTACAAACCCATTAATCATTTGTGGTAAAGTTAAAACCGCTGTAACTATTCCAACCAATGGAATTAGCATACTGGAACTTGATAAAATGGTGGTAAGTATTGATTCTGGGTTTCTTGCGAATCCAATTATTTTACCTAGTGATCCAGTGTCAAGATCCTTTAATCTGTCTAATTTACTGGATTTTT...
26,625
ON649700.1
Yangshan Harbor Nitrososphaeria virus
Zhou,Y.
Shanghai Ocean University, College of Food Science and Technology
China
2022-08-27
YSH_174770
Yangshan Harbor Nitrososphaeria virus
null
null
dsDNA
36,856
GenBank
null
China
China
Nitrososphaeria
null
2018
null
null
Yangshan Harbor Nitrososphaeria virus isolate YSH_174770, complete genome
CAGAAACTGCTCCGCTGTCTATCTGGTCGATGTCTATTGTTATCTCGGCATCATCTGCTAATGCTGAATCTGAAATAACAGGTGCCGTTGCAGCCGTTGTTGAGGTTTTCTCAGTTGCATCTATTGTAATCTTTGTAGAGAGTATTGTAGTTCCTGCTTCGTTAATGTCCACTGTTACGAGATTTGCTCCTGTACCGGCAGTTGTTAATGATGCTCTTACTGCTGTTAATGTAAATGCGAATGGCATACGGAAAGTTGCTTTTGCTGTACCTGCTTCTAGTGCTGTTGTTTCATCTGATGCTGAAATTACAATAGCTTGT...
26,626
ON649701.1
Yangshan Harbor Nitrososphaeria virus
Zhou,Y.
Shanghai Ocean University, College of Food Science and Technology
China
2022-08-27
YSH_922147
Yangshan Harbor Nitrososphaeria virus
null
null
dsDNA
38,245
GenBank
null
China
China
Nitrososphaeria
null
2018
null
null
Yangshan Harbor Nitrososphaeria virus isolate YSH_922147, complete genome
CATTAGTAATGAAAGGTGATTCTAAATGAAATTAACAGAATTTAATCTTTACATTAAAGAAACTGAAAAAGATAGTTTTGCTTTATGTATTGAGTTACCTGATAATTCAAGAAATTATATCCATACACAAGATATGATTCTAAATGATTGTCTTATTGCATTAGAAGAATTAAGAGGAAAAACCATAGAAGATGATTGTAATGCACCATACTTAGAAAAAGATGGAACTTATTTCAGAATTAAAATGACAGTAGAACCAAGAGAATTTACATTTTCAGAGAGTTTGTATTTTCATTCAAGAAAGTTGAATCTCAATGATG...
26,627
NC_002031.1
Yellow fever virus
Rice,C.M., Lenches,E.M., Eddy,S.R., Shin,S.J., Sheets,R.L., Strauss,J.H.
National Center for Biotechnology Information, NIH
USA
1986-11-18
null
Orthoflavivirus flavi
Orthoflavivirus
Flaviviridae
ssRNA(+)
10,862
RefSeq
1
null
null
null
null
null
null
PRJNA485481
Yellow fever virus, complete genome
AGTAAATCCTGTGTGCTAATTGAGGTGCATTGGTCTGCAAATCGAGTTGCTAGGCAATAAACACATTTGGATTAATTTTAATCGTTCGTTGAGCGATTAGCAGAGAACTGACCAGAACATGTCTGGTCGTAAAGCTCAGGGAAAAACCCTGGGCGTCAATATGGTACGACGAGGAGTTCGCTCCTTGTCAAACAAAATAAAACAAAAAACAAAACAAATTGGAAACAGACCTGGACCTTCAAGAGGTGTTCAAGGATTTATCTTTTTCTTTTTGTTCAACATTTTGACTGGAAAAAAGATCACAGCCCACCTAAAGAGGT...
9,090
PP025904.1
Yellow fever virus
Mendoza,P., Ortiz-Alvarez,L.
Vircell S.A., I+D, Molecular Diagnostics
Spain
2024-01-11
17D
Orthoflavivirus flavi
Orthoflavivirus
Flaviviridae
ssRNA(+)
10,810
GenBank
null
Spain
Spain
null
null
2018-04-13
null
null
Yellow fever virus isolate 17D, complete genome
ATTGGTCTGCAAATCGAGTTGCTAGGCAATAAACACATTTGGATTAATTTTAATCGTTCGTTGAGCGATTAGCAGAGAACTGACCAGAACATGTCTGGTCGTAAAGCTCAGGGAAAAACCCTGGGCGTCAATATGGTACGACGAGGAGTTCGCTCCTTGTCAAACAAAATAAAACAAAAAACAAAACAAATTGGAAACAGACCTGGACCTTCAAGAGGTGTTCAAGGATTTATCTTTTTCTTTTTGTTCAACATTTTGACTGGAAAAAAGATCACAGCCCACCTAAAGAGGTTGTGGAAAATGCTGGACCCAAGACAAGG...
9,660
OR882684.1
Yellow fever virus
Li,Y., Song,Y., Mueller,S.
Codagenix, Inc., Infectious disease
USA
2023-12-12
99/616
Orthoflavivirus flavi
Orthoflavivirus
Flaviviridae
ssRNA(+)
10,862
GenBank
null
United Kingdom
United Kingdom
null
null
2003
null
null
Yellow fever virus isolate 99/616, complete genome
AGTAAATCCTGTGTGCTAATTGAGGTGCATTGGTCTGCAAATCGAGTTGCTAGGCAATAAACACATTTGGATTAATTTTAATCGTTCGTTGAGCGATTAGCRGAGAACTGACCAGAACATGTCTGGTCGTAAAGCTCAGGGAAAAACCCTGGGCGTCAATATGGTACGACGAGGAGTTCGCTCCTTGTCAAACAAAATAAAACAAAAAACAAAACAAATTGGAAACAGACCTGGACCTTCAAGAGGTGTTCAAGGATTTATCTTTTTCTTTTTGTTCAACATTTTGACTGGAAAAAAGATCACAGCCCACCTAAAGAGGT...
10,345
OR882688.1
Yellow fever virus
Li,Y., Song,Y.S., Mueller,S.
Codagenix, Inc., Infectious disease
USA
2023-12-12
null
Orthoflavivirus flavi
Orthoflavivirus
Flaviviridae
ssRNA(+)
10,862
GenBank
null
France
France
null
null
null
null
null
Yellow fever virus strain 17D-204/Stamaril, complete genome
AGTAAATCCTGTGTGCTAATTGAGGTGCATTGGTCTGCAAATCGAGTTGCTAGGCAATAAACACATTTGGATTAATTTTAATCGTTCGTTGAGCGATTAGCAGAGAACTGACCAGAACATGTCTGGTCGTAAAGCTCAGGGAAAAACCCTGGGCGTCAATATGGTACGACGAGGAGTTCGCTCCTTGTCAAACAAAATAAAACAAAAAACAAAACAAATTGGAAACAGACCTGGACCTTCAAGAGGTGTTCAAGGATTTATCTTTTTCTTTTTGTTCAACATTTTGACTGGAAAAAAGATCACAGCCCACCTAAAGAGGT...
10,346
OR509732.1
Yellow fever virus
Song,Y., Koide,F., Mueller,S.
Codagenix, Inc., Infectious disease
USA
2023-10-11
null
Orthoflavivirus flavi
Orthoflavivirus
Flaviviridae
ssRNA(+)
10,862
GenBank
null
Germany
Germany
null
null
null
null
null
Yellow fever virus strain 17D-204, complete genome
AGTAAATCCTGTGTGCTAATTGAGGTGCATTGGTCTGCAAATCGAGTTGCTAGGCAATAAACACATTTGGATTAATTTTAATCGTTCGTTGAGCGATTAGCAGAGAACTGACCAGAACATGTCTGGTCGTAAAGCTCAGGGAAAAACCCTGGGCGTCAATATGGTACGACGAGGAGTTCGCTCCTTGTCAAACAAAATAAAACAAAAAACAAAACAAATTGGAAACAGACCTGGACCTTCAAGAGGTGTTCAAGGATTTATCTTTTTCTTTTTGTTCAACATTTTGACTGGAAAAAAGATCACAGCCCACCTAAAGAGGT...
12,056
OQ675592.1
Yellow fever virus
Sacchi,C.T., Campos,K.R., Santos,M.B.N., da Silva Nogueira,J.
Instituto Adolfo Lutz, Strategic Laboratory
Brazil
2023-07-19
PNH_6392
Orthoflavivirus flavi
Orthoflavivirus
Flaviviridae
ssRNA(+)
10,859
GenBank
null
Brazil: Sao Paulo, Aguas da Prata
Brazil
Callicebus nigrifrons
null
2023-02-24
null
null
Yellow fever virus isolate PNH_6392, complete genome
AGTAAATCCTGTGTGCTAATTGAGGTGCATTGGTCTGCAAATCGAGTTGCTAGGCAATAAACACATTTGGATTAATTTTGATCGTTCGTTGAGCGATTAGCAGAGAATTGACCAGAAAATGTCTGGTCGTAAAGCTCAGGGAAAAACCCTGGGCGTCAATATGGTACGACGAGGAGTCCGCTCCTTGTCAAGCAAAATAAAACAAAAAACAAAACAAATTGGAAGTAGACCTGGACCTTCAAGAGGCGTTCAAGGATTTGTTTTTTTCTTTTTGTTCAATGTCTTGACTGGAAAGAAGATTACTGCTCATCTGAAGAAAC...
14,641
OR052147.1
Yellow fever virus
Sacchi,C.T., Campos,K.R., Santos,M.B.N., Nogueira,J.S.
Instituto Adolfo Lutz, Strategic Laboratory
Brazil
2023-07-19
NGS810
Orthoflavivirus flavi
Orthoflavivirus
Flaviviridae
ssRNA(+)
10,760
GenBank
null
Brazil: Sao Paulo, Sao Joao da Boa Vista
Brazil
Homo sapiens
blood
2023-04-28
null
null
Yellow fever virus strain hYFV/Brazil/SP-IAL-810/2023, complete genome
AGTTGCTCCTGTGTGCTAATTGAGGTGCATTGGTCTGCAAATCGAGTTGCTAGGCAATAAACACATTTGGATTAATTTTGATCGTTCGTTGAGCGATTAGCAGAGAATTGACCAGAAAATGTCTGGTCGTAAAGCTCAGGGAAAAACCCTGGGCGTCAATATGGTACGACGAGGAGTCCGCTCCTTGTCAAGCAAAATAAAACAAAAAACAAAACAAATTGGAAGTAGACCTGGACCTTCAAGAGGCGTTCAAGGATTTGTTTTTTTCTTTTTGTTCAACGTCTTGACTGGAAAGAAGATTACTGCTCATCTGAAGAAAC...
14,642
OR119828.1
Yellow fever virus
Marano,J.M., Tesh,R.B., Bowen,R.A., Bosco-Lauth,A.M.
Colorado State University, Biomedical Sciences
USA
2023-07-19
Jimenez
Orthoflavivirus flavi
Orthoflavivirus
Flaviviridae
ssRNA(+)
10,889
GenBank
null
Panama
Panama
Homo sapiens
null
1974
null
null
Yellow fever virus isolate Jimenez, complete genome
AGTAAATCCTGTGTGCTAATTGAGGTGCATTGGTCTGCAAATCGAGTTGCTAGGCAATAAACACATTTGGATTAATTTTGATCGTTCGTTGAGCGATTAGCAGAGAATTGACCAGAAAATGTCTGGTCGTAAAGCTCAGGGAAAAACCCTGGGCGTCAATATGGTTCGACGAGGAGTCCGCTCCTTGTCAAGCAAAATAAAACAAAAAACAAAACAAATTGGAAGTAGACCTGGACCTTCAAGAGGCGTTCAAGGATTTGTTTTTTTCTTCTTGTTCAATGTTTTGACCGGAAAGAAGATCACTGCTCACCTGAAGAAAC...
14,645
ON402371.1
Yellow fever virus
Shaibu,J.O., Akinyemi,K.O., Oyefolu,A.O.B., Audu,R.A.
Nigerian Institute of Medical Research, Microbiology
Nigeria
2023-06-07
004NM
Orthoflavivirus flavi
Orthoflavivirus
Flaviviridae
ssRNA(+)
10,776
GenBank
null
Nigeria
Nigeria
Homo sapiens
null
2020-12-14
null
null
Yellow fever virus isolate 004NM, complete genome
CTGTGTGCTAATTGAGGTGCATTGGTCTGCAAATCGAGTTGCTAGGCAATAAACACATTTGGATTAATTTTAATCGTTCGTTGAGCGATTAGCAGAGAACTGACCAGAACATGTCTGGTCGTAAAGCTCAGGGAAAAACCCTGGGCGTCAATATGGTACGACGAGGAGTTCGCTCCTTGTCAAACAAAATAAAACAAAAAACAAAACAAATTGGAAACAGACCTGGACCTTCAAGAGGTGTACAAGGATTTATCTTTTTCTTCTTGTTCAACATTTTGACTGGAAAAAAGATCACGGCCCACCTAAAGAGGTTGTGGAAA...
15,287
ON323052.1
Yellow fever virus
Shaibu,J.O., James,A.B., Amoo,O.S., Okwuraiwe,A.P., Adeogun,A., Ige,F., Hudson,R., Oshinloyal,H., Ferife,G., Akinyemi,K.O., Oyefolu,A.O., Audu,R.A.
Nigerian Institute of Medical Research, Microbiology
Nigeria
2023-04-29
a
Orthoflavivirus flavi
Orthoflavivirus
Flaviviridae
ssRNA(+)
10,751
GenBank
null
Nigeria
Nigeria
Homo sapiens
null
2020-12-14
null
null
Yellow fever virus isolate a, complete genome
CTGTGTGCTAATTGAGGTGCATTGGTCTGCAAATCGAGTTGCTAGGCAATAAACACATTTGGATTAATTTTAATCGTTCGTTGAGCGATTAGCAGAGAACTGACCAGAACATGTCTGGTCGTAAAGCTCAGGGAAAAACCCTGGGCGTCAATATGGTACGACGAGGAGTTCGCTCCTTGTCAAACAAAATAAAACAAAAAACAAAACAAATTGGAAACAGACCTGGACCTTCAAGAGGTGTTCAAGGATTTATTTTTTTCTTTTTGTTCAACATTCTGACTGGAAAAAAGATCACGGCCCACCTAAAGAGGTTGTGGAAA...
16,417
ON323054.1
Yellow fever virus
Shaibu,J.O., James,A.B., Amoo,O.S., Okwuraiwe,A.P., Adeogun,A., Ige,F., Hudson,R., Oshinloyal,H., Ferife,G., Akinyemi,K.O., Oyefolu,A.O., Audu,R.A.
Nigerian Institute of Medical Research, Microbiology
Nigeria
2023-04-29
C
Orthoflavivirus flavi
Orthoflavivirus
Flaviviridae
ssRNA(+)
10,715
GenBank
null
Nigeria
Nigeria
Homo sapiens
null
2020-12-14
null
null
Yellow fever virus isolate C, complete genome
TGAGGTGCATTGGTCTGCAAATCGAGTTGCTAGGCAATAAACACATTTGGATTAATTTTAATCGTTCGTTGAGCGATTAGCAGAGAACTGACCAGAACATGTCTGGTCGTAAAGCTCAGGAAAAAACCCTGGGCGTCAATATGGTACGACGAGGAGTTCGCTCCTTGTCAAACAAAATAAAACAAAAAACAAAACAAATTGGAAACAGACCTGGACCTTCAAGAGGTGTACAAGGATTTATCTTTTTCTTCTTGTTCAACATTTTGACTGGAAAAAAGATCACGGCCCACCTAAAGAGGTTGTGGAAAATGCTGGACCCA...
16,418
OP508715.1
Yellow fever virus
Giovanetti,M., Fonseca,V., Lourenco,J., Xavier,J., Adelino,T., Oliveira,C., Fritsch,H., Guimaraes,N., Zanluca,C., Ribeiro,A.C., Alcantara,L.C.J., Nunes,C.D.
Pan-American Health Organization (PAHO), PAHO Health Emergency (PHE)
Brazil
2023-02-12
null
Orthoflavivirus flavi
Orthoflavivirus
Flaviviridae
ssRNA(+)
10,802
GenBank
null
Brazil: Tocantins
Brazil
null
null
2017-09-03
null
null
Yellow fever virus strain PR6021-2017, complete genome
TAAATCCTGTGTGCTAATTGAGGTGCATTGGTCTGCAAATCGAGTTGCTAGGCAATAAACACATTTGGATTAATTTTGATCGTTCGTTGAGCGATTAGCAGAGAATTGACCAGAAAATGTCTGGTCGTAAAGCTCAGGGAAAAACCCTGGGCGTCAATATGGTACGACGAGGAGTCCGCTCCTTGTCAAGCAAAATAAAACAAAAAACAAAACAAATTGGAAGTAGACCTGGACCTTCAAGAGGCGTTCAAGGATTTGTTTTTTTCTTTTTGTTCAACGTTTTGACTGGAAAGAAGATTACTGCTCATTTGAAGAAACTA...
18,388
OP796361.1
Yellow fever virus
Kuznetsova,N.A., Siniavin,A., Butenko,A., Larichev,V., Kozlova,A., Usachev,E., Nikiforova,M., Usacheva,O., Shchetinin,A., Pochtovyi,A., Shidlovskaya,E., Odintsova,A., Belyaeva,E., Voskoboinikov,A., Bessonova,A., Vasilchenko,L., Karganova,G., Zlobin,V., Logunov,D., Gushchin,V., Gintsburg,A., Siniavin,A.E., Nikiforova,M....
National Research Center for Epidemiology and Microbiology named after the honorary academician N. F. Gamaleya, Pathogenic Microorganisms Variability Laboratory
Russia
2022-11-26
null
Orthoflavivirus flavi
Orthoflavivirus
Flaviviridae
ssRNA(+)
10,862
GenBank
null
Russia
Russia
null
null
null
null
null
Yellow fever virus strain YFV 17DD-UN, complete genome
AGTAAATCCTGTGTGCTAATTGAGGTGCATTGGTCTGCAAATCGAGTTGCTAGGCAATAAACACATTTGGATTAATTTTAATCGTTCGTTGAGCGATTAGCAGAGAACTGACCAGAACATGTCTGGTCGTAAAGCTCAGGGAAAAACCCTGGGCGTCAATATGGTACGACGAGGAGTTCGCTCCTTGTCAAACAAAATAAAACAAAAAACAAAACAAATTGGAAACAGACCTGGACCTTCAAGAGGTGTTCAAGGATTTATCTTCTTCTTTTTGTTCAACATTTTGACTGGAAAAAAGATCACAGCCCACCTAAAGAGGT...
22,071
MW960207.1
Yellow fever virus
Simo Tchetgna,H., Descorps-Declere,S., Selekon,B., Garba-Ouangole,S., Konamna,X., Soungouza,M., Tekpa,G., Somse,P., Nakoune,E., Berthet,N., Descorp-Declere,S., Sem,R.
Centre for Research in Infectious Disease, Microbiology and Parasitology
Cameroon
2022-11-19
18/YF118
Orthoflavivirus flavi
Orthoflavivirus
Flaviviridae
ssRNA(+)
10,830
GenBank
1
Central African Republic
Central African Republic
Homo sapiens
blood
2018
null
null
Yellow fever virus isolate 18/YF118, complete genome
ATTAAAATTAATCCTGTGTGCTAATTGAGGTGCATTGGTCTGCAAATCGAGTTGCTAGGCAATAAACACATTTGGATTAATTTTAATCGTTCTTTGAGCGATTAGCAGAGAACTGACCAGAACAATGTCTGGTCGAAAAGCTCAGGGTAAAACCCTGGGCGTCAATATGGTAAGACGAGGAGTACGCTCCTTGTCAAACAAAATAAAACAAAAAACAAAACAGATTGGAAACAGACCTGGCCCTTCAAGAGGTGTTCAAGGATTTATTTTCTTCTTTTTGTTCAACATCCTAACTGGGAAAAAACTAACTACCCACCTGA...
22,137
OM938988.1
Yellow fever virus
Esson,R., Rodrigues De Sousa,E., Benair,L., Devard,N., Soulet,D., Gillet,A., Bassard,I., Falque,S., Chareyre,A., Marmin,M., Girerd-Chambaz,Y., Logvinoff,C., Navarro Sanchez,M.E., Navarro-Sanchez,E.
Sanofi, Analytical Sciences - Microbiology Platform
France
2022-09-05
MSLFDV02508
Orthoflavivirus flavi
Orthoflavivirus
Flaviviridae
ssRNA(+)
10,862
GenBank
1
France
France
null
null
2016
null
null
Yellow fever virus isolate MSLFDV02508, complete genome
AGTAAATCCTGTGTGCTAATTGAGGTGCATTGGTCTGCAAATCGAGTTGCTAGGCAATAAACACATTTGGATTAATTTTAATCGTTCGTTGAGCGATTAGCAGAGAACTGACCAGAACATGTCTGGTCGTAAAGCTCAGGGAAAAACCCTGGGCGTCAATATGGTACGACGAGGAGTTCGCTCCTTGTCAAACAAAATAAAACAAAAAACAAAACAAATTGGAAACAGACCTGGACCTTCAAGAGGTGTTCAAGGATTTATCTTTTTCTTTTTGTTCAACATTTTGACTGGAAAAAAGATCACAGCCCACCTAAAGAGGT...
25,390
OM938989.1
Yellow fever virus
Esson,R., Rodrigues De Sousa,E., Benair,L., Devard,N., Soulet,D., Gillet,A., Bassard,I., Falque,S., Chareyre,A., Marmin,M., Girerd-Chambaz,Y., Logvinoff,C., Navarro Sanchez,M.E., Navarro-Sanchez,E.
Sanofi, Analytical Sciences - Microbiology Platform
France
2022-09-05
DSFDV02794
Orthoflavivirus flavi
Orthoflavivirus
Flaviviridae
ssRNA(+)
10,862
GenBank
1
France
France
null
null
2018
null
null
Yellow fever virus isolate DSFDV02794, complete genome
AGTAAATCCTGTGTGCTAATTGAGGTGCATTGGTCTGCAAATCGAGTTGCTAGGCAATAAACACATTTGGATTAATTTTAATCGTTCGTTGAGCGATTAGCAGAGAACTGACCAGAACATGTCTGGTCGTAAAGCTCAGGGAAAAACCCTGGGCGTCAATATGGTACGACGAGGAGTTCGCTCCTTGTCAAACAAAATAAAACAAAAAACAAAACAAATTGGAAACAGACCTGGACCTTCAAGAGGTGTTCAAGGATTTATCTTTTTCTTTTTGTTCAACATTTTGACTGGAAAAAAGATCACAGCCCACCTAAAGAGGT...
25,391
OM938990.1
Yellow fever virus
Esson,R., Rodrigues De Sousa,E., Benair,L., Devard,N., Soulet,D., Gillet,A., Bassard,I., Falque,S., Chareyre,A., Marmin,M., Girerd-Chambaz,Y., Logvinoff,C., Navarro Sanchez,M.E., Navarro-Sanchez,E.
Sanofi, Analytical Sciences - Microbiology Platform
France
2022-09-05
DSFDV02926
Orthoflavivirus flavi
Orthoflavivirus
Flaviviridae
ssRNA(+)
10,862
GenBank
1
France
France
null
null
2019
null
null
Yellow fever virus isolate DSFDV02926, complete genome
AGTAAATCCTGTGTGCTAATTGAGGTGCATTGGTCTGCAAATCGAGTTGCTAGGCAATAAACACATTTGGATTAATTTTAATCGTTCGTTGAGCGATTAGCAGAGAACTGACCAGAACATGTCTGGTCGTAAAGCTCAGGGAAAAACCCTGGGCGTCAATATGGTACGACGAGGAGTTCGCTCCTTGTCAAACAAAATAAAACAAAAAACAAAACAAATTGGAAACAGACCTGGACCTTCAAGAGGTGTTCAAGGATTTATCTTTTTCTTTTTGTTCAACATTTTGACTGGAAAAAAGATCACAGCCCACCTAAAGAGGT...
25,392
ON245434.1
Yellow fever virus
Oguzie,J.U., Oluniyi,P.E.
Redeemer's University, Biological Sciences
Nigeria
2022-08-07
null
Orthoflavivirus flavi
Orthoflavivirus
Flaviviridae
ssRNA(+)
7,875
GenBank
null
Nigeria: Edo
Nigeria
Homo sapiens
null
2020-02
SAMN27514999
PRJNA824010
MAG UNVERIFIED: Yellow fever virus, complete genome
ACAAAAAGTTAAGAGAGTGGTGGCCAGTTTGATGAGAGGATTGTCCTCAAGGAAACGCCGTTCCCATGAAAACAGATGGTTGCTCCTAAATGTGACGCAACTGCACTACAAACATCTTGGAAGCCAAGTACTGGTGCCCAGATTCAATGGAATACAACTGTCCTAATCTCAGTCCAAGAGAGGAGCCAGATGACATTGATTGCTGGTGCTATGGGGTGGAAAACGTTAGAGTCGCATATGGCAAGTGTGACTCAGCAGGCAGGTCTAGGAGGTCGAGAAGGGCCATTGACTTGNCTACGCAGATGACTGGAAGAATGGGT...
27,304
ON245435.1
Yellow fever virus
Oguzie,J.U., Oluniyi,P.E.
Redeemer's University, Biological Sciences
Nigeria
2022-08-07
null
Orthoflavivirus flavi
Orthoflavivirus
Flaviviridae
ssRNA(+)
8,558
GenBank
null
Nigeria: Ebonyi
Nigeria
Homo sapiens
null
2020-11
SAMN27515261
PRJNA824010
MAG UNVERIFIED: Yellow fever virus, complete genome
ATAAAACAAAAAACAAAACAAATTGGAAACAGACCTGGGTGTTCAAGGATTTATTTTTTTCTTTTTGTTCAACATTCTGACTCCAAGACAAGGTTAAGAGAGTGGTGGCCAGTTTGATGAGAGGATTGTCCTCAAGGAAACGCCGTTCCCATGACGCTCTGACTGTGCAACTCCTAATTCTGGGAATGATATTGATGGCGGGTGGAGTGACCTTGGTGCGGAAAAACAGATGGTTGCTCCTAAATGTGACATCTGAGGACCTCGGGAAAACATTCTCCGTGGGCACAGGCAACTGCACTACAAACATCTTGGAAGCCAAG...
27,305
MN643077.1
Yellow fever virus
Abreu,F.V.S., Ribeiro,I.P., Furtado,N.D., dos Santos,A.A.C., Cruz,S.O.D., Mello,I.S., Dos Santos,M.P., Raphael,L.M.S., Ferreira-de-Brito,A., Pina-Costa,A., Brasil,P., Lourenco-de-Oliveira,R., Bonaldo,M.C.
Fundacao Oswaldo Cruz, Laboratorio de Biologia Molecular de Flavivirus
Brazil
2022-06-10
null
Orthoflavivirus flavi
Orthoflavivirus
Flaviviridae
ssRNA(+)
11,007
GenBank
null
Brazil: Teresopolis-RJ
Brazil
Homo sapiens
null
2018-01-16
null
null
Yellow fever virus strain H295, complete genome
AGTAAATCCTGTGTGCTAATTGAGGTGCATTGGTCTGCAAATCGAGTTGCTAGGCAATAAACACATTTGGATTAATTTTGATCGTTCGTTGAGCGATTAGCAGAGAATTGACCAGAAAATGTCTGGTCGTAAAGCTCAGGGAAAAACCCTGGGCGTCAATATGGTTCGACGAGGAGTCCGCTCCTTGTCAAGCAAAATAAAACAAAAAACAAAACAAATTGGAAGTAGACCTGGACCTTCAAGAGGCGTTCAAGGATTTGTTTTTTTCTTTTTGTTCAACGTTTTGACTGGAAAGAAGATTACTGCTCATCTGAAGAAAC...
30,258
NC_048215.1
Yellow head virus
Dong,X., Liu,S., Zhu,L., Wan,X., Liu,Q., Qiu,L., Zou,P., Zhang,Q., Huang,J.
National Center for Biotechnology Information, NIH
USA
2020-05-15
20120706
Okavirus flavicapitis
Okavirus
Roniviridae
ssRNA(+)
26,769
RefSeq
1
China
China
Penaeus chinensis
null
2012-07-06
null
PRJNA485481
Yellow head virus isolate 20120706, complete genome
ACGTTACGTTCCACGTACTATTCCCACTGCATCAAATAAACCATTCAAGTTTTCCTCGCGTTTCCGACCATGGAGCCTCTTCAGGTTCTATTGTTGTTGGCAACATTCCTCAGTCTCCTCCTATTGCTTAGGATCCTAGACCGCGGTACGCATGTTCTGTCGGCCGTCAGATTGACTCTCAGGACCACTTTCTTCAATGAAAGTGCACGAAACCCGCTCGTATGGACCAGCCCCGCCGAATGGTTCAATTCATCCGGCAAGACTATTCCCAGAATGGACAAACGCAGATGTCGAAGTGTGAAACACGGATCGCCATATCC...
3,265
NC_043505.1
Yellow head virus
Sittidilokratna,N., Dangtip,S., Cowley,J.A., Walker,P.J., Phetchampai,N., Boonsaeng,V., Jitrapakdee,S., Unajak,S., Hodgson,R.A., Panyim,S., Hodgson,R.A.J.
National Center for Biotechnology Information, NIH
USA
2019-06-28
Chachoengsao 1998
Okavirus flavicapitis
Okavirus
Roniviridae
ssRNA(+)
26,662
RefSeq
4
Thailand
Thailand
Penaeus monodon
null
null
null
PRJNA485481
Yellow head virus, complete genome
ACGTTACGTTCCACGTACTATTCCCACTGCACTCAATAAACCTTTATACCCGTTTTCAATCGTTACCGACCATGGAACCTTTTCAGGTTCTATCGTTGTTGGCAACATCCTTCAGTCTACTCCTATTGCTTAGGATCCTAGACCGCGGCACGACTGTTCTGTCTGCCGTCAGATTGACTCTCAGGACCACTTTCTTCAATGAAAGTGCACGACGCCCGCTCTATTGGACCAGCCCCGCCAAGTGGTTCAATTCGCTTGGCCAGACTACTCCCAGGATGGAAAACCGATCGATCAAGAGTGTGAAGCTTTCTAGCGCCCAT...
3,425
FJ848674.1
Yellow head virus
Ma,H., Overstreet,R.M., Jovonovich,J.A.
The University of Southern Mississippi, Coastal Sciences
USA
2011-03-31
null
Okavirus flavicapitis
Okavirus
Roniviridae
ssRNA(+)
26,662
GenBank
null
Thailand
Thailand
Penaeus monodon
null
1995
null
null
Yellow head virus strain YHV1995, complete genome
ACGTTACGTTCCACGTACTATTCCCACTGCACTCAATAAACCTTTATACCCGTTTTCAATCGTTACCGACCATGGAACCTTTTCAGGTTCTATCGTTGTTGGCAACATCCTTCAGTCTACTCCTATTGCTTAGGATCCTAGACCGCGGCACGAATGTTCTGTCTGCCGTCAGATTGACTCTCAGGACCACTTTCTTCAATGAAAGTGTACGACGCCCGCTCTATTGGACCAGCCCCGCCAAGTGGTTCAATTCGCTTGGCCAGACTACTCCCAGGATGGAAAAACGATCGATCAAGAGTGTGAAGCTTTCTAGCGCCCAT...
99,501
FJ848675.1
Yellow head virus
Ma,H., Overstreet,R.M., Jovonovich,J.A.
The University of Southern Mississippi, Coastal Sciences
USA
2011-03-31
null
Okavirus flavicapitis
Okavirus
Roniviridae
ssRNA(+)
26,652
GenBank
null
Thailand
Thailand
Penaeus monodon
null
1999
null
null
Yellow head virus strain YHV1999, complete genome
ACGTTACGTTCCACGTACTATTCCCACTGCACTCAATAAACCTTTATACCCGTTTTCAATCGTTACCGACCATGGAACCTTTTCAGGTTCTATCGTTGTTGGCAACATCCTTCAGTCTACTCCTATTGCTTAGGATCCTAGACCGCGGCACGAATGTTCTGTCTGCCGTCAGATTGACTCTCAGGACCACTTTCTTCAATGAAAGTGCACGACGCCCGCTCTATTGGACCAGCCCCGCCAAGTGGTTCAATTCGCTTGGCCAGACTACTCCCAGGATGGAAAAACGATCGATCAAGAGTGTGAAGCTTTCTAGCGCCCAT...
99,502
FJ848673.1
Yellow head virus
Ma,H., Overstreet,R.M., Jovonovich,J.A.
The University of Southern Mississippi, Coastal Sciences
USA
2009-06-23
null
Okavirus flavicapitis
Okavirus
Roniviridae
ssRNA(+)
26,673
GenBank
1
Thailand
Thailand
Penaeus monodon
null
1992
null
null
Yellow head virus strain YHV1992, complete genome
ACGTTACGTTCCACGTACTATTCCCACTGCACTCAATAAACCTTTATACCCGTTTTCAATCGTTACCGACCATGGAACCTTTTCAGGTTCTATCGTTGTTGGCAACATCCTTCAGTCTACTCCTATTGCTTAGGATCCTAGACCGCGGCACGAATGTTCTGTCTGCCGTCAGATTGACTCTCAGGACCACTTTCTTCAATGAAAGTGTACGACGCCCGCTCTATTGGACCAGCCCCGCCAAGTGGTTCAATTCGCTTGGCCAGACTACTCCCAGGATGGAAAAACGATCGATCAAGAGTGTGAAGCTTTCTAGCGCCCAT...
102,677
EU487200.1
Yellow head virus
Sittidilokratna,N., Hodgson,R.A., Cowley,J.A., Jitrapakdee,S., Boonsaeng,V., Panyim,S., Walker,P.J., Unajak,S., Phetchampai,N., Dangtip,S., Hodgson,R.A.J.
CSIRO Livestock Industries, Australian Animal Health Laboratory
Australia
2008-07-07
Chachoengsao 1998
Okavirus flavicapitis
Okavirus
Roniviridae
ssRNA(+)
26,662
GenBank
4
Thailand
Thailand
Penaeus monodon
null
null
null
null
Yellow head virus, complete genome
ACGTTACGTTCCACGTACTATTCCCACTGCACTCAATAAACCTTTATACCCGTTTTCAATCGTTACCGACCATGGAACCTTTTCAGGTTCTATCGTTGTTGGCAACATCCTTCAGTCTACTCCTATTGCTTAGGATCCTAGACCGCGGCACGACTGTTCTGTCTGCCGTCAGATTGACTCTCAGGACCACTTTCTTCAATGAAAGTGCACGACGCCCGCTCTATTGGACCAGCCCCGCCAAGTGGTTCAATTCGCTTGGCCAGACTACTCCCAGGATGGAAAACCGATCGATCAAGAGTGTGAAGCTTTCTAGCGCCCAT...
105,071
NC_076842.1
Yinshui bat virus
Luo,D.-S., Li,B., Shen,X.-R., Jiang,R.-D., Zhu,Y., Wu,J., Fan,Y., Bourhy,H., Hu,B., Ge,X.-Y., Shi,Z.-L., Dacheux,L., Luo,D., Shi,Z., Shen,X., Zohaib,A., Jiang,R.
National Center for Biotechnology Information, NIH
USA
2023-05-04
1017
Vesiculovirus yinshui
Vesiculovirus
Rhabdoviridae
ssRNA(-)
10,940
RefSeq
null
China
China
Rhinolophus sinicus
brain
2007-05
null
PRJNA485481
Yinshui bat virus isolate 1017, complete genome
GAATCATTTATGCAAAAAACAAATTTTAACAGAGCTAAAAAATGTCGAACTTGGTTCGCGACATCGCTCACAAAGACGAGGTTGGGGTCAAAACTCCATCTGACTCCGACCTCCCAGAATACCCAAAAGACTATTTCGCCAAGGGTGAAAAACCAGTCCTAACTATCGGGACTAAAGACAGCCTAGGAGCTCTAAGGGGATATGTGTATAGTGGTCTCCTTGATGGAACAGTCCTGATTCAGCACATAAATTCTTATCTTTATTATGTGCTAAGAGACCGGAAAGAGCGGAATGAGAAAAAGTGGAAATCCTTTGATATT...
632
MN607594.1
Yinshui bat virus
Luo,D.-S., Li,B., Shen,X.-R., Jiang,R.-D., Zhu,Y., Wu,J., Fan,Y., Bourhy,H., Hu,B., Ge,X.-Y., Shi,Z.-L., Dacheux,L., Luo,D., Shi,Z., Shen,X., Zohaib,A., Jiang,R.
Institut Pasteur, Lyssavirus Epidemiology and Neuropathology Unit
France
2021-01-12
1017
Vesiculovirus yinshui
Vesiculovirus
Rhabdoviridae
ssRNA(-)
10,940
GenBank
null
China
China
Rhinolophus sinicus
brain
2007-05
null
null
Yinshui bat virus isolate 1017, complete genome
GAATCATTTATGCAAAAAACAAATTTTAACAGAGCTAAAAAATGTCGAACTTGGTTCGCGACATCGCTCACAAAGACGAGGTTGGGGTCAAAACTCCATCTGACTCCGACCTCCCAGAATACCCAAAAGACTATTTCGCCAAGGGTGAAAAACCAGTCCTAACTATCGGGACTAAAGACAGCCTAGGAGCTCTAAGGGGATATGTGTATAGTGGTCTCCTTGATGGAACAGTCCTGATTCAGCACATAAATTCTTATCTTTATTATGTGCTAAGAGACCGGAAAGAGCGGAATGAGAAAAAGTGGAAATCCTTTGATATT...
44,737
MN607595.1
Yinshui bat virus
Luo,D.-S., Li,B., Shen,X.-R., Jiang,R.-D., Zhu,Y., Wu,J., Fan,Y., Bourhy,H., Hu,B., Ge,X.-Y., Shi,Z.-L., Dacheux,L., Luo,D., Shi,Z., Shen,X., Zohaib,A., Jiang,R.
Institut Pasteur, Lyssavirus Epidemiology and Neuropathology Unit
France
2021-01-12
D170001
Vesiculovirus yinshui
Vesiculovirus
Rhabdoviridae
ssRNA(-)
10,952
GenBank
null
China
China
Rhinolophus sinicus
brain
2017-03
null
null
Yinshui bat virus isolate D170001, complete genome
AACAAACCTCTGAAATCATTTATGCAAAAAACAAATTTTAACAGAGCTAAAAAATGTCGAACTTGGTTCGCGACATCGCTCACAAAGACGAGGTTGGGGTCAAAACTCCATCTGACTCCGACCTCCCAGAATACCCAAAAGACTATTTCGCCAAGGGTGAAAAACCAGTCCTAACTATCGGGACTAAAGACAGCCTAGGAGCTCTAAGGGGATATGTGTATAGTGGTCTCCTTGATGGAACAGTCCTGATTCAGCACATAAACTCTTATCTTTATTATGTGCTAAGAGACCGAAAAGAGCGGAATGAGAAAAAGTGGAAA...
44,738
MN607596.1
Yinshui bat virus
Luo,D.-S., Li,B., Shen,X.-R., Jiang,R.-D., Zhu,Y., Wu,J., Fan,Y., Bourhy,H., Hu,B., Ge,X.-Y., Shi,Z.-L., Dacheux,L., Luo,D., Shi,Z., Shen,X., Zohaib,A., Jiang,R.
Institut Pasteur, Lyssavirus Epidemiology and Neuropathology Unit
France
2021-01-12
D170022
Vesiculovirus yinshui
Vesiculovirus
Rhabdoviridae
ssRNA(-)
10,909
GenBank
null
China
China
Rhinolophus sinicus
brain
2017-03
null
null
Yinshui bat virus isolate D170022, complete genome
GAGCTAAAAAATGTCGAACTTGGTTCGCGACATCGCTCACAAAGACGAGGTTGGGGTCAAAACTCCATCTGACTCCGACCTCCCAGAATACCCAAAAGACTATTTCGCCAAGGGTGAAAAACCAGTCCTAACTATCGGGACTAAAGACAGCCTAGGAGCTCTAAGGGGATATGTGTATAGTGGTCTCCTTGATGGAACAGTCCTGATTCAGCACATAAACTCTTATCTTTATTATGTGCTAAGAGACCGAAAAGAGCGGAATGAGAAAAAGTGGAAATCCTTTGATATTGTTATCGCAGAGGAACAGACCGATGTAGGAG...
44,739
MN607597.1
Yinshui bat virus
Luo,D.-S., Li,B., Shen,X.-R., Jiang,R.-D., Zhu,Y., Wu,J., Fan,Y., Bourhy,H., Hu,B., Ge,X.-Y., Shi,Z.-L., Dacheux,L., Luo,D., Shi,Z., Shen,X., Zohaib,A., Jiang,R.
Institut Pasteur, Lyssavirus Epidemiology and Neuropathology Unit
France
2021-01-12
D170190
Vesiculovirus yinshui
Vesiculovirus
Rhabdoviridae
ssRNA(-)
10,940
GenBank
null
China
China
Rhinolophus sinicus
brain
2017-03
null
null
Yinshui bat virus isolate D170190, complete genome
AAATCATTTATGCAAAAAACAAATTTTAACAGAGCTAAAAAATGTCGAACTTGGTTCGCGACATCGCTCACAAAGACGAGGTTGGGGTCAAAACTCCATCTGACTCCGACCTCCCAGAATACCCAAAAGACTATTTCGCCAAGGGTGAAAAACCAGTCCTAACTATCGGGACTAAAGACAGCCTAGGAGCTCTAAGGGGATATGTGTATAGTGGTCTCCTTGATGGAACAGTCCTGATTCAGCACATAAATTCTTATCTTTATTATGTGCTAAGAGACCGGAAAGAGCGGAATGAGAAAAAGTGGAAATCCTTTGATATT...
44,740
NC_004422.1
Youcai mosaic virus
Aguilar,I., Sanchez,F., Martin Martin,A., Martinez-Herrera,D., Ponz,F.
National Center for Biotechnology Information, NIH
USA
2002-11-20
null
Youcai mosaic virus
Tobamovirus
Virgaviridae
ssRNA(+)
6,303
RefSeq
1
null
null
Brassica napus
null
null
null
PRJNA485481
Youcai mosaic virus, complete genome
GTTTTATTTTTGTTGCAACAACAACAACAAATTACAATAACAACAAAACAAATACAAACAACAACAACATGGCACAATTTCAACAAACAGTAAACATGCAAACATTGCAGGCTGCCGCGGGGCGCAACAGCCTGGTGAATGATTTAGCATCTCGACGCGTTTATGATAATGCTGTCGAGGAGCTAAATGCACGCTCGAGACGCCCTAAGGTCCATTTCTCCAAATCAGTGTCTACGGAACAGACGCTGTTGGCTTCAAACGCTTATCCGGAGTTTGAGATTTCCTTTACTCATACCCAACAGGCCGTACACTCCCTAGCG...
8,553
PP100126.1
Youcai mosaic virus
Kim,J.-E., Kwon,B., Son,G., Baek,E., Yu,B.C.
Korea Seed & Variety Service, Seed Testing & Research Center
Korea
2024-01-24
OC
Youcai mosaic virus
Tobamovirus
Virgaviridae
ssRNA(+)
6,303
GenBank
null
South Korea
South Korea
Prunus persica
null
2022
null
null
Youcai mosaic virus isolate OC, complete genome
GTTTTATTTTTATTGCAACAACAACAACAAATTACAATAACAACAAAACAAATACAAACAACAACAACATGGCACAATTTCAACAAACAGTAAACATGCAAACATTGCAGGCTGCCGCAGGGCGCAACAGCCTGGTGAATGATTTAGCTTCCCGACGCGTTTATGATAATGCTGTCGAGGAGTTGAATGCACGCTCGAGACGCCCTAAAGTTCATTTCTCCAAATCAGTGTCTACGGAACAGACGCTGTTAGCTTCAAACGCTTATCCGGAGTTTGAGATTTCTTTTACTCATACCCAACACGCCGTGCATTCCCTTGCG...
9,505
OR261028.1
Youcai mosaic virus
Gu,X.T., Feng,W.C., Hua,H.Y., Zhang,K.
Yangzhou University, College of Plant Protection
China
2023-09-26
YoMV-YZ2
Youcai mosaic virus
Tobamovirus
Virgaviridae
ssRNA(+)
6,303
GenBank
null
China
China
Solanum nigrum
null
2022
null
null
Youcai mosaic virus isolate YoMV-YZ2, complete genome
GTTTTAATTTTATTGCAACAACAACAACAAATTACAATAAAACAAAACAAATACAAACAACAACAACATGGCACAATTTCAACAAACAGTAAACATGCAAACATTGCAGGCTGCCGCAGGGCGCAACAGCCTGGTGAACGATTTAGCCTCACGACGTGTTTATGACAATGCAGTCGAGGAGCTAAATGCACGCTCAAGACGCCCTAAGGTTCATTTCTCCAAATCAGTGTCTACGGAACAGACGCTGTTAGCTTCAAACGCTTATCCGGAGTTTGAGATTTCCTTTACTCATACCCAACATGCCGTGCATTCCCTTGCGG...
12,703
OR261029.1
Youcai mosaic virus
Gu,X.T., Feng,W.C., Hua,H.Y., Zhang,K.
Yangzhou University, College of Plant Protection
China
2023-09-26
YoMV-YZ3
Youcai mosaic virus
Tobamovirus
Virgaviridae
ssRNA(+)
6,303
GenBank
null
China
China
Solanum nigrum
null
2022
null
null
Youcai mosaic virus isolate YoMV-YZ3, complete genome
GTTTTAATTTTATTGCAACAACAACAACAAATTACAATAAAACAAAACAAATACAAACAACAACAACATGGCACAATTTCAACAAACAGTAAACATGCAAACATTGCAGGCTGCCGCAGGGCGCAACAGCCTGGTGAACGATTTAGCCTCACGACGTGTTTATGACAATGCAGTCGAGGAGCTAAATGCACGCTCAAGACGCCCTAAGGTTCATTTCTCCAAATCAGTGTCTACGGAACAGACGCTGTTAGCTTCAAACGCTTATCCGGAGTTTGAGATTTCCTTTACTCATACTCAACATGCCGTGCATTCCCTTGCGG...
12,704
OR261030.1
Youcai mosaic virus
Gu,X.T., Feng,W.C., Hua,H.Y., Zhang,K.
Yangzhou University, College of Plant Protection
China
2023-09-26
YoMV-YZ8
Youcai mosaic virus
Tobamovirus
Virgaviridae
ssRNA(+)
6,304
GenBank
null
China
China
Solanum nigrum
null
2022
null
null
Youcai mosaic virus isolate YoMV-YZ8, complete genome
GTTTTAATTTTATTGCAACAACAACAACAAATTACAATAAAACAAAACAAATACAAACAACAACAACATGGCACAATTTCAACAAACAGTAAACATGCAAACATTGCAGGCTGCCGCAGGGCGCAACAGCCTGGTGAACGATTTAGCCTCACGACGTGTTTATGACAATGCAGTCGAGGAGCTAAATGCACGCTCAAGACGCCCTAAGGTTCATTTCTCCAAATCAGTGTCTACGGAACAGACGCTGTTAGCTTCAAACGCTTATCCGGAGTTTGAGATTTCCTTTACTCATACTCAACATGCCGTGCATTCCCTTGCGG...
12,705
OK655842.1
Youcai mosaic virus
Li,Z., Nong,Y., He,Z.
Guangdong Academy of Agricultural Sciences, Plant Protection Research Institute
China
2023-01-15
GDHZ
Youcai mosaic virus
Tobamovirus
Virgaviridae
ssRNA(+)
6,304
GenBank
null
China: Guangdong, Huizhou
China
Raphanus sativus
null
2019-02
null
null
Youcai mosaic virus isolate GDHZ, complete genome
GTTTTATTTTTATTGCAACAACAACAACAAATTACAATAACAACAAAACAAATACAAACAACAACAACATGGCACAATTTCAACAAACAGTAAACATGCAAACATTGCAGGCTGCCGCAGGGCGCAACAGCCTGGTGAATGATTTAGCCTCACGTCGTGTTTATGACAATGCTGTCGAGGAGCTAAATGCACGCTCGAGACGCCCTAAGGTCCATTTCTCCAAATCAGTGTCTACGGAACAGACGCTGTTAGCTTCAAACGCTTATCCGGAGTTTGAGATTTCCTTTACTCATACCCAACATGCCGTGCACTCCCTTGCG...
19,419
MW307290.1
Youcai mosaic virus
Byun,H., Hong,S.-B., Kwak,H.R., Kim,M., Choi,H.S.
National Institute of Agricultural Sciences, RDA, Crop protection
null
2022-04-17
AS1-2
Youcai mosaic virus
Tobamovirus
Virgaviridae
ssRNA(+)
6,303
GenBank
null
South Korea
South Korea
Brassica rapa
null
2017
null
null
Youcai mosaic virus isolate AS1-2, complete genome
GTTTTATTTTTATTGCAACAACAACAACAAATTACAATAACAACAAAACAAATACAAACAACAACAACATGGCACAATTTCAACAAACAGTTAACATGCAAACATTGCAGGCTGCCGCAGGGCGCAACAGCCTGGTGAATGATTTAGCATCACGACGCGTTTATGACAATGCAGTCGAGGAGCTAAATGCGCGCTCGAGACGCCCTAAGGTCCATTTCTCCAAAACAGTGTCCACGGAACAGACGCTGTTAGCTTCAGACGCTTATCCGGAGTTTGAGATCTCTTTCACTCATACCCAACGTGCAGTACACTCCCTTGCG...
31,242
MW307291.1
Youcai mosaic virus
Byun,H., Hong,S.-B., Kwak,H.R., Kim,M., Choi,H.S.
National Institute of Agricultural Sciences, RDA, Crop protection
null
2022-04-17
CD-B
Youcai mosaic virus
Tobamovirus
Virgaviridae
ssRNA(+)
6,303
GenBank
null
South Korea
South Korea
Stellaria media
null
2019
null
null
Youcai mosaic virus isolate CD-B, complete genome
GTTTTATTTTTATTGCAACAACAACAACAAATTACAATAACAACAAAACAAATACAAACAACAACAACATGGCACAATTTCAACAAACAGTAAACATGCAAACATTGCAGGCTGCCGCAGGGCGCAACAGCCTGGTGAATGATTTAGCTTCTCGACGCGTTTATGATAATGCTGTCGAGGAGTTGAATGCACGCTCGAGACGCCCTAAAGTTCATTTCTCCAAATCAGTGTCTACGGAACAGACGCTGTTAGCTTCAAACGCTTATCCGGAGTTTGAGATTTCCTTCACTCATACCCAACACGCCGTGCATTCCCTTGCG...
31,243
MW307292.1
Youcai mosaic virus
Byun,H., Hong,S.-B., Kwak,H.R., Kim,M., Choi,H.S.
National Institute of Agricultural Sciences, RDA, Crop protection
null
2022-04-17
CD-G-1
Youcai mosaic virus
Tobamovirus
Virgaviridae
ssRNA(+)
6,303
GenBank
null
South Korea
South Korea
Plantago asiatica
null
2019
null
null
Youcai mosaic virus isolate CD-G-1, complete genome
GTTTTATTTTTATTGCAACAACAACAACAAATTACAATAACAACAAAACAAATACAAACAACAACAACATGGCACAATTTCAACAAACAGTAAACATGCAAACATTGCAGGCTGCCGCAGGGCGCAACAGCCTGGTGAATGATTTAGCTTCCCGACGCGTTTATGATAATGCTGTCGAGGAGTTGAATGCACGCTCGAGACGCCCTAAAGTTCATTTCTCCAAATCAGTGTCTACGGAACAGACGCTGTTAGCTTCAAACGCTTATCCGGAGTTTGAGATTTCTTTCACTCATACCCAACACGCCGTGCATTCCCTTGCG...
31,244
MW307293.1
Youcai mosaic virus
Byun,H., Hong,S.-B., Kwak,H.R., Kim,M., Choi,H.S.
National Institute of Agricultural Sciences, RDA, Crop protection
null
2022-04-17
CJ-PA
Youcai mosaic virus
Tobamovirus
Virgaviridae
ssRNA(+)
6,303
GenBank
null
South Korea
South Korea
Plantago asiatica
null
2020
null
null
Youcai mosaic virus isolate CJ-PA, complete genome
GTTTTATTTTTATTGCAACAACAACAACAAATTACAATAACAACAAAACAAATACAAACAACAACAACATGGCACAATTTCAACAAACAGTAAACATGCAAACATTGCAGGCTGCCGCAGGGCGCAACAGCCTGGTGAATGATTTAGCTTCCCGACGCGTTTATGATAATGCTGTCGAGGAGTTGAATGCACGCTCGAGACGCCCTAAAGTTCATTTCTCCAAGTCAGTGTCAACGGAACAGACGCTGTTAGCTTCAAACGCTTATCCGGAGTTTGAGATTTCTTTCACTCATACCCAACACGCCGTGCATTCCCTTGCG...
31,245
LC701592.1
Youcai mosaic virus
Chen,Y.K., Lin,Y.S., Huang,C.H.
Plant Pathology; 145 Shin-Dar Road, Taichung 402
Taiwan
2022-03-25
FC-1
Youcai mosaic virus
Tobamovirus
Virgaviridae
ssRNA(+)
6,302
GenBank
null
Taiwan: Miaoli, Zhuolan
Taiwan
Crossandra infundibuliformis
null
2021-01-15
null
null
Youcai mosaic virus FC-1 RNA, complete genome
GTTTTAATTTTATTGCAACAACAACAACAAATTACAATAACAACAAAACAAATACAAACAACAACAACATGGCACAATTTCAACAAACAGTAAACATGCAAACATTGCAGGCTGCCGCAGGGCGCAACAGCCTGGTGAATGATTTAGCCTCACGACGTGTTTATGACAATGCTGTCGAGGAGCTAAATGCACGCTCGAGACGCCCTAAGGTTCATTTCTCCAAATCAGTGTCTACGGAACAGACGCTGTTAGCTTCAAACGCTTATCCGGAGTTTGAGATTTCCTTTACTCATACCCAACATGCCGTACACTCCCTTGCG...
32,228
LC701593.1
Youcai mosaic virus
Chen,Y.K., Lin,Y.S., Huang,C.H.
Plant Pathology; 145 Shin-Dar Road, Taichung 402
Taiwan
2022-03-25
FC-2
Youcai mosaic virus
Tobamovirus
Virgaviridae
ssRNA(+)
6,302
GenBank
null
Taiwan: Miaoli, Zhuolan
Taiwan
Crossandra infundibuliformis
null
2021-01-15
null
null
Youcai mosaic virus FC-2 RNA, complete genome
GTTTTAATTTTATTGCAACAACAACAACAAATTACAATAACAACAAAACAAATACAAACAACAACAACATGGCACAATTTCAACAAACAGTAAACATGCAAACATTGCAGGCTGCCGCAGGGCGCAACAGCCTGGTGAATGATTTAGCCTCACGACGTGTTTATGACAATGCTGTCGAGGAGCTAAATGCACGCTCGAGACGCCCTAAGGTTCATTTCTCCAAATCAGTGTCTACGGAACAGACGCTGTTAGCTTCAAACGCTTATCCGGAGTTTGAGATTTCCTTTACTCATACCCAACATGCCGTACACTCCCTTGCG...
32,229
MT130444.1
Youcai mosaic virus
Wei,X., Tian,C.
Southwest University, College of Plant Protection
China
2020-09-30
ercai
Youcai mosaic virus
Tobamovirus
Virgaviridae
ssRNA(+)
6,304
GenBank
null
China: Chongqing
China
Brassica juncea
null
2018-11-11
null
null
Youcai mosaic virus isolate ercai, complete genome
GTTTTATTTTTGTTGCAACAACAACAACAAATTACAATAACAACAAAACAAATACAAACAACAACAACATGGCACAATTTCAACAAACAGTAAACATGCAAACATTGCAGGCTGCCGCAGGGCGCAACAGCCTGGTGAATGATTTAGCCTCACGACGTGTTTATGACAATGCTGTCGAGGAGCTAAATGCACGCTCGAGACGCCCTAAGGTTCATTTCTCCAAATCAGTGTCTACGGAACAGACGCTGTTAGCTTCAAACGCTTATCCGGAGTTTGAGATTTCCTTTACTCATACCCAACATGCCGTACACTCCCTTGCG...
46,837
LC390003.1
Youcai mosaic virus
Hong,J.S., Choi,S.A.
Division of Bio-resources Science, College of Agriculture and Life Sciences, Kangwon National University, Plant Virology Laboratory; 1 Gangwondaehak, Chuncheon, Gangwon-do 24341
Korea
2018-06-29
Chm
Youcai mosaic virus
Tobamovirus
Virgaviridae
ssRNA(+)
6,304
GenBank
null
South Korea
South Korea
Chelidonium majus
null
2016-03-15
null
null
Youcai mosaic virus Chm genomic RNA, complete genome
GTTTATTTTTATTGCAACAACAACAACAAATTACAATAACAAACAAAACAAATACAAACAACAACAACATGGCACAATTTCAACAAACAGTAAACATGCAAACATTGCAGGCTGCCGCAGGGCGCAACAGCCTGGTGAATGATTTAGCTTCCCGACGCGTTTATGATAATGCTGTCGAGGAGTTGAATGCACGCTCGAGACGCCCTAAAGTTCATTTCTCCAAATCAGTGTCTACGGAACAGACGCTGTTAGCTTCAAACGCTTATCCGGAGTTTGAGATTTCTTTCACTCATACCCAACACGCCGTGCATTCCCTTGCG...
70,189
MF542264.1
Youcai mosaic virus
Kwon,S.-j., Cho,I.-s., Yoon,J.-y., Jeong,B.-n.
National Institute of Horticultural and Herbal Science, Horticultural and Crop Herbal Environment Division
null
2018-03-13
Rg
Youcai mosaic virus
Tobamovirus
Virgaviridae
ssRNA(+)
6,303
GenBank
null
South Korea
South Korea
Rehmannia glutinosa
null
2016-09-26
null
null
Youcai mosaic virus isolate Rg, complete genome
GTTTTATTTTTATTGCAACAACAACAACAAATTACAATAACAACAAAACAAATACAAACAACAACAACATGGCACAATTTCAACAAACAGTAAACATGCAAACATTGCAGGCTGCCGCAGGGCGCAACAGCCTGGTGAATGATTTAGCATCACGACGCGTTTATGACAATGCAGTCGAGGAGCTGAATGCACGCTCGAGACGCCCTAAGGTCCTTTTCTCCAAATCAGTGTCCACGGAACAGACGCTGTTGGCTTCAGATGCTTATCCGGAGTTTGAGATTTCCTTTACTCATACCCAAAATGCCGTGCATTCCCTTGCG...
71,827
MG001349.1
Youcai mosaic virus
Ju,H.-K., Kim,I.-H., Hu,W.-X., Kim,B., Choi,G.-W., Kim,J., Hammond,J., Lim,H.-S.
Chungnam National University, Agricultural Biology
South Korea
2017-11-25
HK1
Youcai mosaic virus
Tobamovirus
Virgaviridae
ssRNA(+)
6,304
GenBank
null
South Korea
South Korea
Brassica rapa subsp. pekinensis
null
2016
null
null
Youcai mosaic virus isolate HK1, complete genome
GTTTTAATTTTATTGCAACAACAACAACAAAATACAATAACAACAAAACAAATACAAACAACAACAACATGGCACAATTTCAACAAACAGTAAACATGCAAACATTGCAGGCTGCCGCAGGGCGCAACAGCCTGGTGAATGATTTAGCTTCTCGACGCGTTTATGATAATGCTGTCGAGGAGTTGAATGCACGCTCGAGACGCCCTAAAGTTCATTTCTCCAAATCAGTGTCTACGGAACAGACGCTGTTAGCTTCAAACGCTTATCCGGAGTTTGAGATTTCCTTCACTCATACCCAACACGCCGTGCATTCCCTTGCG...
73,623
MG001350.1
Youcai mosaic virus
Ju,H.-K., Kim,I.-H., Hu,W.-X., Kim,B., Choi,G.-W., Kim,J., Hammond,J., Lim,H.-S.
Chungnam National University, Agricultural Biology
South Korea
2017-11-25
HK2
Youcai mosaic virus
Tobamovirus
Virgaviridae
ssRNA(+)
6,303
GenBank
null
South Korea
South Korea
Brassica rapa subsp. pekinensis
null
2016
null
null
Youcai mosaic virus isolate HK2, complete genome
GTTTTAATTTTATTGCAACAACAACAACAAATTACAATAACAACAAAACAAATACAAACAACAACAACATGGCACAATTTCAACAAACAGTAAACATGCAAACATTGCAGGCTGCCGCAGGGCGCAACAGCCTGGTGAATGATTTAGCTTCTCGACGCGTTTATGATAATGCTGTCGAGGAGTTGAATGCACGCTCGAGACGCCCTAAAGTTCATTTCTCCAAATCAGTGTCTACGGAACAGACGCTGTTAGCTTCAAACGCTTATCCGGAGTTTGAGATTTCCTTCACTCATACCCAACACGCCGTGCATTCCCTTGCG...
73,624
LC333289.1
Youcai mosaic virus
Yang,H.J., Min,H.G., Lee,H.K., Lee,D.S., Kim,S.Y., Lee,S.H.
College of Agriculture and Life Sciences, Kyungpook National University, Department of Applied Biosciences, Plant virus laboratory; 80 Daehakro, Bukgu, Daegu 41566
Korea
2017-11-10
Y01
Youcai mosaic virus
Tobamovirus
Virgaviridae
ssRNA(+)
6,303
GenBank
null
South Korea:Daegu
South Korea
Trifolium repens
null
null
null
null
Youcai mosaic virus Y01 genomic RNA, complete genome
GTTTTAATTTTATTGCAACAACAACAACAAATTACAATAATAACAAAACAAATACAAACAACAACAACATGGCACAATTTCAACAAACAGTAAACATGCAAACATTGCAGGCTGCCGCAGGGCGCAACAGCCTGGTGAATGATTTAGCTTCTCGACGCGTTTATGATAATGCTGTCGAGGAGTTGAATGCACGCTCGAGACGCCCTAAAGTTCATTTCTCCAAATCAGTGTCTACGGAACAGACGCTGTTAGCTTCAAACGCTTATCCGGAGTTTGAGATTTCCTTCACCCATACCCAACATGCCGTGCATTCCCTTGCG...
73,916
KF137561.1
Youcai mosaic virus
Seguin,J., Rajeswaran,R., Malpica-Lopez,N., Martin,R.R., Kasschau,K., Dolja,V.V., Otten,P., Farinelli,L., Pooggin,M.M.
University of Basel, Department of Environmental Sciences, Botany
Switzerland
2013-09-24
W41
Youcai mosaic virus
Tobamovirus
Virgaviridae
ssRNA(+)
6,303
GenBank
1
Switzerland
Switzerland
Arabidopsis thaliana
null
2010-08
null
null
Youcai mosaic virus isolate W41, complete genome
GTTTTATTTTTATTGCAACAACAACAACAAATTACAATAACAACAAAACAAATACAAACAACAACAACATGGCACAATTTCAACAAACAGTAAACATGCAAACATTGCAGGCTGCCGCGGGGCGCAACAGCCTGGTGAATGATTTAGCATCTCGACGCGTTTATGATAATGCTGTCGAGGAGCTAAATGCACGCTCGAGACGCCCTAAGGTCCATTTCTCCAAATCAGTGTCTACGGAACAGACGCTGTTGGCTTCAAACGCTTATCCGGAGTTTGAGATTTCCTTTACTCATACCCAACAGGCCGTACACTCCCTAGCG...
93,052
JX422022.1
Youcai mosaic virus
Niu,Y.B., You,W.X., Zhang,X.M., Zhao,H.Q., Zhao,B.J., Miao,L.J., Zhao,X.
Shanxi Agricultural University, College of Life Science
China
2012-10-03
SX
Youcai mosaic virus
Tobamovirus
Virgaviridae
ssRNA(+)
6,304
GenBank
null
China
China
Rehmannia
null
2011-05-01
null
null
Youcai mosaic virus isolate SX, complete genome
GTTTTAATTTTATTGCAACAACAACAACAAATTACAATAACAACAAAACAAATACAAACAACAACAACATGGCACAATTTCAACAAACAGTAAACATGCAAACATTGCAGGCTGCCGCAGGGCGCAACAGCCTGGTGAATGATTTAGCCTCACGACGCGTTTATGATAACGCCGTCGAGGAGCTGAATGCTCGTTCGAGACGCCCTAAGGTTCATTTCTCCAAATCAGTGTCTACGGAACAGACGCTGTTGGCTTCAGATGCTTATCCGGAGTTTGAGATTTCCTTCACTCATACCCAAAATGCCGTGCATTCCCTTGCG...
96,157
NC_002549.1
Zaire ebolavirus
Volchkov,V.E., Volchkova,V.A., Chepurnov,A.A., Blinov,V.M., Dolnik,O., Netesov,S.V., Feldmann,H., Slenczka,W., Klenk,H.D., Becker,S., Ternovoj,V.A., Kotov,A.N., Bukreyev,A.A.
National Center for Biotechnology Information, NIH
USA
1999-02-10
Ebola virus/H.sapiens-tc/COD/1976/Yambuku-Mayinga
Orthoebolavirus zairense
Orthoebolavirus
Filoviridae
ssRNA(-)
18,959
RefSeq
5
null
null
null
null
null
null
PRJNA485481
Zaire ebolavirus isolate Ebola virus/H.sapiens-tc/COD/1976/Yambuku-Mayinga, complete genome
CGGACACACAAAAAGAAAGAAGAATTTTTAGGATCTTTTGTGTGCGAATAACTATGAGGAAGATTAATAATTTTCCTCTCATTGAAATTTATATCGGAATTTAAATTGAAATTGTTACTGTAATCACACCTGGTTTGTTTCAGAGCCACATCACAAAGATAGAGAACAACCTAGGTCTCCGAAGGGAGCAAGGGCATCAGTGTGCTCAGTTGAAAATCCCTTGTCAACACCTAGGTCTTATCACATCACAAGTTCCACCTCAGACTCTGCAGGGTGATCCAACAACCTTAATAGAAACATTATTGTTAAAGGACAGCATT...
8,768
OQ784117.1
Zaire ebolavirus
Davies,K.A., Welch,S.R., Jain,S., Sorvillo,T.E., Coleman-McCray,J.D., Montgomery,J.M., Spiropoulou,C.F., Albarino,C., Spengler,J.R., Davies,K., Welch,S., Sorvillo,T., Coleman,J.D., Montgomery,J., Spiropoulou,C., Spengler,J.
Centers for Disease Control and Prevention, Viral Special Pathogens Branch
USA
2023-05-14
null
Orthoebolavirus zairense
Orthoebolavirus
Filoviridae
ssRNA(-)
18,958
GenBank
1
null
null
null
null
null
null
null
Mutant Zaire ebolavirus rMA-EBOV, complete genome
GGACACACAAAAAGAAAGAAGAATTTTTAGGATCTTTTGTGTGCGAATAACTATGAGGAAGATTAATAATTTTCCTCTCATTGAAATTTATATCGGAATTTAAATTGAAATTGTTACTGTAATCACACCTGGTTTGTTTCAGAGCCACATCACAAAGATAGAGAACAACCTAGGTCTCCGAAGGGAGCAAGGGCATCAGTGTGCTCAGTTGAAAATCCCTTGTCAACACCTAGGTCTTATCACATCACAAGTTCCACCTCAGACTCTGCAGGGTGATCCAACAACCTTAATAGAAACATTATTGTTAAAGGACAGCATTA...
15,905
OQ784118.1
Zaire ebolavirus
Davies,K.A., Welch,S.R., Jain,S., Sorvillo,T.E., Coleman-McCray,J.D., Montgomery,J.M., Spiropoulou,C.F., Albarino,C., Spengler,J.R., Davies,K., Welch,S., Sorvillo,T., Coleman,J.D., Montgomery,J., Spiropoulou,C., Spengler,J.
Centers for Disease Control and Prevention, Viral Special Pathogens Branch
USA
2023-05-14
null
Orthoebolavirus zairense
Orthoebolavirus
Filoviridae
ssRNA(-)
19,720
GenBank
1
null
null
null
null
null
null
null
Mutant Zaire ebolavirus rMA-EBOV-ZsG, complete genome
GGACACACAAAAAGAAAGAAGAATTTTTAGGATCTTTTGTGTGCGAATAACTATGAGGAAGATTAATAATTTTCCTCTCATTGAAATTTATATCGGAATTTAAATTGAAATTGTTACTGTAATCACACCTGGTTTGTTTCAGAGCCACATCACAAAGATAGAGAACAACCTAGGTCTCCGAAGGGAGCAAGGGCATCAGTGTGCTCAGTTGAAAATCCCTTGTCAACACCTAGGTCTTATCACATCACAAGTTCCACCTCAGACTCTGCAGGGTGATCCAACAACCTTAATAGAAACATTATTGTTAAAGGACAGCATTA...
15,906
OQ784119.1
Zaire ebolavirus
Davies,K.A., Welch,S.R., Jain,S., Sorvillo,T.E., Coleman-McCray,J.D., Montgomery,J.M., Spiropoulou,C.F., Albarino,C., Spengler,J.R., Davies,K., Welch,S., Sorvillo,T., Coleman,J.D., Montgomery,J., Spiropoulou,C., Spengler,J.
Centers for Disease Control and Prevention, Viral Special Pathogens Branch
USA
2023-05-14
null
Orthoebolavirus zairense
Orthoebolavirus
Filoviridae
ssRNA(-)
19,540
GenBank
1
null
null
null
null
null
null
null
Mutant Zaire ebolavirus rMA-EBOV-nLuc, complete genome
GGACACACAAAAAGAAAGAAGAATTTTTAGGATCTTTTGTGTGCGAATAACTATGAGGAAGATTAATAATTTTCCTCTCATTGAAATTTATATCGGAATTTAAATTGAAATTGTTACTGTAATCACACCTGGTTTGTTTCAGAGCCACATCACAAAGATAGAGAACAACCTAGGTCTCCGAAGGGAGCAAGGGCATCAGTGTGCTCAGTTGAAAATCCCTTGTCAACACCTAGGTCTTATCACATCACAAGTTCCACCTCAGACTCTGCAGGGTGATCCAACAACCTTAATAGAAACATTATTGTTAAAGGACAGCATTA...
15,907
OQ784120.1
Zaire ebolavirus
Davies,K.A., Welch,S.R., Jain,S., Sorvillo,T.E., Coleman-McCray,J.D., Montgomery,J.M., Spiropoulou,C.F., Albarino,C., Spengler,J.R., Davies,K., Welch,S., Sorvillo,T., Coleman,J.D., Montgomery,J., Spiropoulou,C., Spengler,J.
Centers for Disease Control and Prevention, Viral Special Pathogens Branch
USA
2023-05-14
null
Orthoebolavirus zairense
Orthoebolavirus
Filoviridae
ssRNA(-)
20,302
GenBank
1
null
null
null
null
null
null
null
Mutant Zaire ebolavirus rMA-EBOV-nLuc-ZsG, complete genome
GGACACACAAAAAGAAAGAAGAATTTTTAGGATCTTTTGTGTGCGAATAACTATGAGGAAGATTAATAATTTTCCTCTCATTGAAATTTATATCGGAATTTAAATTGAAATTGTTACTGTAATCACACCTGGTTTGTTTCAGAGCCACATCACAAAGATAGAGAACAACCTAGGTCTCCGAAGGGAGCAAGGGCATCAGTGTGCTCAGTTGAAAATCCCTTGTCAACACCTAGGTCTTATCACATCACAAGTTCCACCTCAGACTCTGCAGGGTGATCCAACAACCTTAATAGAAACATTATTGTTAAAGGACAGCATTA...
15,908
OQ784121.1
Zaire ebolavirus
Davies,K.A., Welch,S.R., Jain,S., Sorvillo,T.E., Coleman-McCray,J.D., Montgomery,J.M., Spiropoulou,C.F., Albarino,C., Spengler,J.R., Davies,K., Welch,S., Sorvillo,T., Coleman,J.D., Montgomery,J., Spiropoulou,C., Spengler,J.
Centers for Disease Control and Prevention, Viral Special Pathogens Branch
USA
2023-05-14
null
Orthoebolavirus zairense
Orthoebolavirus
Filoviridae
ssRNA(-)
20,233
GenBank
1
null
null
null
null
null
null
null
Mutant Zaire ebolavirus rMA-EBOV-ZsGnLuc, complete genome
GGACACACAAAAAGAAAGAAGAATTTTTAGGATCTTTTGTGTGCGAATAACTATGAGGAAGATTAATAATTTTCCTCTCATTGAAATTTATATCGGAATTTAAATTGAAATTGTTACTGTAATCACACCTGGTTTGTTTCAGAGCCACATCACAAAGATAGAGAACAACCTAGGTCTCCGAAGGGAGCAAGGGCATCAGTGTGCTCAGTTGAAAATCCCTTGTCAACACCTAGGTCTTATCACATCACAAGTTCCACCTCAGACTCTGCAGGGTGATCCAACAACCTTAATAGAAACATTATTGTTAAAGGACAGCATTA...
15,909
OQ892294.1
Zaire ebolavirus
Postigo Hidalgo,I., Drexler,J.F.
Charite Universitatsmedizin Berlin, Institute of virology
Germany
2023-05-13
FOR2221
Orthoebolavirus zairense
Orthoebolavirus
Filoviridae
ssRNA(-)
18,765
GenBank
null
Guinea: Forecariah
Guinea
Homo sapiens
null
2014-11-30
null
null
Zaire ebolavirus isolate FOR2221, complete genome
GAATTTAAATTGAAATTGTTACTGTAATCATACCTGGTTTGTTTCAGAGCCATATCACCAAGATAGAGAACAACCTAGGTCTCCGGAGGGGGCAAGGGCATCAGTGTGCTCAGTTGAAAATCCCTTGTCAACATCTAGGCCTTATCACATCACAAGTTCCGCCTTAAACTCTGCAGGGTGATCCAACAACCTTAATAGCAACATTATTGTTAAAGGACAGCATTAGTTCACAGTCAAACAAGCAAGATTGAGAATTAACTTTGATTTTGAACCTGAACACCCAGAGGACTGGAGACTCAACAACCCTAAAGCCTGGGGTA...
15,922
OQ892295.1
Zaire ebolavirus
Postigo Hidalgo,I., Drexler,J.F.
Charite Universitatsmedizin Berlin, Institute of virology
Germany
2023-05-13
COY2229
Orthoebolavirus zairense
Orthoebolavirus
Filoviridae
ssRNA(-)
18,765
GenBank
null
Guinea: Coyah
Guinea
Homo sapiens
null
2014-11-30
null
null
Zaire ebolavirus isolate COY2229, complete genome
GAATTTAAATTGAAATTGTTACTGTAATCATACCTGGTTTGTTTCAGAGCCATATCACCAAGATAGAGAACAACCTAGGTCTCCGGAGGGGGCAAGGGCATCAGTGTGCTCAGTTGAAAATCCCTTGTCAACATCTAGGCCTTATCACATCACAAGTTCCGCCTTAAACTCTGCAGGGTGATCCAACAACCTTAATAGCAACATTATTGTTAAAGGACAGCATTAGTTCACAGTCAAACAAGCAAGATTGAGAATTAACTTTGATTTTGAACCTGAACACCCAGAGGACTGGAGACTCAACAACCCTAAAGCCTGGGGTA...
15,923
OQ892296.1
Zaire ebolavirus
Postigo Hidalgo,I., Drexler,J.F.
Charite Universitatsmedizin Berlin, Institute of virology
Germany
2023-05-13
CON2136
Orthoebolavirus zairense
Orthoebolavirus
Filoviridae
ssRNA(-)
18,765
GenBank
null
Guinea: Conakry
Guinea
Homo sapiens
null
2014-11-24
null
null
Zaire ebolavirus isolate CON2136, complete genome
GAATTTAAATTGAAATTGTTACTGTAATCATACCTGGTTTGTTTCAGAGCCATATCACCAAGATAGAGAACAACCTAGGTCTCCGGAGGGGGCAAGGGCATCAGTGTGCTCAGTTGAAAATCCCTTGTCAACATCTAGGCCTTATCACATCACAAGTTCCGCCTTAAACTCTGCAGGGTGATCCAACAACCTTAATAGCAACATTATTGTTAAAGGACAGCATTAGTTCACAGTCAAACAAGCAAGATTGAGAATTAACTTTGATTTTGAACCTGAACACCCAGAGGACTGGAGACTCAACAACCCTAAAGCCTGGGGTA...
15,924
OQ892297.1
Zaire ebolavirus
Postigo Hidalgo,I., Drexler,J.F.
Charite Universitatsmedizin Berlin, Institute of virology
Germany
2023-05-13
TEL2455
Orthoebolavirus zairense
Orthoebolavirus
Filoviridae
ssRNA(-)
18,765
GenBank
null
Guinea: Telimele
Guinea
Homo sapiens
null
2014-12-10
null
null
Zaire ebolavirus isolate TEL2455, complete genome
GAATTTAAATTGAAATTGTTACTGTAATCATACCTGGTTTGTTTCAGAGCCATATCACCAAGATAGAGAACAACCTAGGTCTCCGGAGGGGGCAAGGGCATCAGTGTGCTCAGTTGAAAATCCCTTGTCAACATCTAGGCCTTATCACATCACAAGTTCCGCCTTAAACTCTGCAGGGTGATCCAACAACCTTAATAGCAACATTATTGTTAAAGGACAGCATTAGTTCACAGTCAAACAAGCAAGATTGAGAATTAACTTTGATTTTGAACCTGAACACCCAGAGGACTGGAGACTCAACAACCCTAAAGCCTGGGGTA...
15,925
OQ892298.1
Zaire ebolavirus
Postigo Hidalgo,I., Drexler,J.F.
Charite Universitatsmedizin Berlin, Institute of virology
Germany
2023-05-13
COY2448
Orthoebolavirus zairense
Orthoebolavirus
Filoviridae
ssRNA(-)
18,765
GenBank
null
Guinea: Coyah
Guinea
Homo sapiens
null
2014-12-10
null
null
Zaire ebolavirus isolate COY2448, complete genome
GAATTTAAATTGAAATTGTTACTGTAATCATACCTGGTTTGTTTCAGAGCCATATCACCAAGATAGAGAACAACCTAGGTCTCCGGAGGGGGCAAGGGCATCAGTGTGCTCAGTTGAAAATCCCTTGTCAACATCTAGGCCTTATCACATCACAAGTTCCGCCTTAAACTCTGCAGGGTGATCCAACAACCTTAATAGCAACATTATTGTTAAAGGACAGCATTAGTTCACAGTCAAACAAGCAAGATTGAGAATTAACTTTGATTTTGAACCTGAACACCCAGAGGACTGGAGACTCAACAACCCTAAAGCCTGGGGTA...
15,926
OQ892299.1
Zaire ebolavirus
Postigo Hidalgo,I., Drexler,J.F.
Charite Universitatsmedizin Berlin, Institute of virology
Germany
2023-05-13
CON2454
Orthoebolavirus zairense
Orthoebolavirus
Filoviridae
ssRNA(-)
18,765
GenBank
null
Guinea: Conakry
Guinea
Homo sapiens
null
2014-12-10
null
null
Zaire ebolavirus isolate CON2454, complete genome
GAATTTAAATTGAAATTGTTACTGTAATCATACCTGGTTTGTTTCAGAGCCATATCACCAAGATAGAGAACAACCTAGGTCTCCGGAGGGGGCAAGGGCATCAGTGTGCTCAGTTGAAAATCCCTTGTCAACATCTAGGCCTTATCACATCACAAGTTCCGCCTTAAACTCTGCAGGGTGATCCAACAACCTTAATAGCAACATTATTGTTAAAGGACAGCATTAGTTCACAGTCAAACAAGCAAGATTGAGAATTAACTTTGATTTTGAACCTGAACACCCAGAGGACTGGAGACTCAACAACCCTAAAGCCTGGGGTA...
15,927
OQ892300.1
Zaire ebolavirus
Postigo Hidalgo,I., Drexler,J.F.
Charite Universitatsmedizin Berlin, Institute of virology
Germany
2023-05-13
CON2135
Orthoebolavirus zairense
Orthoebolavirus
Filoviridae
ssRNA(-)
18,765
GenBank
null
Guinea: Conakry
Guinea
Homo sapiens
null
2014-11-24
null
null
Zaire ebolavirus isolate CON2135, complete genome
GAATTTAAATTGAAATTGTTACTGTAATCATACCTGGTTTGTTTCAGAGCCATATCACCAAGATAGAGAACAACCTAGGTCTCCGGAGGGGGCAAGGGCATCAGTGTGCTCAGTTGAAAATCCCTTGTCAACATCTAGGCCTTATCACATCACAAGTTCCGCCTTAAACTCTGCAGGGTGATCCAACAACCTTAATAGCAACATTATTGTTAAAGGACAGCATTAGTTCACAGTCAAACAAGCAAGATTGAGAATTAACTTTGATTTTGAACCTGAACACCCAGAGGACTGGAGACTCAACAACCCTAAAGCCTGGGGTA...
15,928
OQ892301.1
Zaire ebolavirus
Postigo Hidalgo,I., Drexler,J.F.
Charite Universitatsmedizin Berlin, Institute of virology
Germany
2023-05-13
COY2146
Orthoebolavirus zairense
Orthoebolavirus
Filoviridae
ssRNA(-)
18,765
GenBank
null
Guinea: Coyah
Guinea
Homo sapiens
null
2014-11-25
null
null
Zaire ebolavirus isolate COY2146, complete genome
GAATTTAAATTGAAATTGTTACTGTAATCATACCTGGTTTGTTTCAGAGCCATATCACCAAGATAGAGAACAACCTAGGTCTCCGGAGGGGGCAAGGGCATCAGTGTGCTCAGTTGAAAATCCCTTGTCAACATCTAGGCCTTATCACATCACAAGTTCCGCCTTAAACTCTGCAGGGTGATCCAACAACCTTAATAGCAACATTATTGTTAAAGGACAGCATTAGTTCACAGTCAAACAAGCAAGATTGAGAATTAACTTTGATTTTGAACCTGAACACCCAGAGGACTGGAGACTCAACAACCCTAAAGCCTGGGGTA...
15,929
OQ892302.1
Zaire ebolavirus
Postigo Hidalgo,I., Drexler,J.F.
Charite Universitatsmedizin Berlin, Institute of virology
Germany
2023-05-13
FOR2456
Orthoebolavirus zairense
Orthoebolavirus
Filoviridae
ssRNA(-)
18,765
GenBank
null
Guinea: Forecariah
Guinea
Homo sapiens
null
2014-12-10
null
null
Zaire ebolavirus isolate FOR2456, complete genome
GAATTTAAATTGAAATTGTTACTGTAATCATACCTGGTTTGTTTCAGAGCCATATCACCAAGATAGAGAACAACCTAGGTCTCCGGAGGGGGCAAGGGCATCAGTGTGCTCAGTTGAAAATCCCTTGTCAACATCTAGGCCTTATCACATCACAAGTTCCGCCTTAAACTCTGCAGGGTGATCCAACAACCTTAATAGCAACATTATTGTTAAAGGACAGCATTAGTTCACAGTCAAACAAGCAAGATTGGGAATTAACTTTGATTTTGAACCTGAACACCCAGAGGACTGGAGACTCAACAACCCTAAAGCCTGGGGTA...
15,930
OQ892303.1
Zaire ebolavirus
Postigo Hidalgo,I., Drexler,J.F.
Charite Universitatsmedizin Berlin, Institute of virology
Germany
2023-05-13
CON1437
Orthoebolavirus zairense
Orthoebolavirus
Filoviridae
ssRNA(-)
18,765
GenBank
null
Guinea: Conakry
Guinea
Homo sapiens
null
2014-10-13
null
null
Zaire ebolavirus isolate CON1437, complete genome
GAATTTAAATTGAAATTGTTACTGTAATCATACCTGGTTTGTTTCAGAGCCATATCACCAAGATAGAGAACAACCTAGGTCTCCGGAGGGGGCAAGGGCATCAGTGTGCTCAGTTGAAAATCCCTTGTCAACATCTAGGCCTTATCACATCACAAGTTCCGCCTTAAACTCTGCAGGGTGATCCAACAACCTTAATAGCAACATTATTGTTAAAGGACAGCATTAGTTCACAGTCAAACAAGCAAGATTGGGAATTAACTTTGATTTTGAACCTGAACACCCAGAGGACTGGAGACTCAACAACCCTAAAGCCTGGGGTA...
15,931
OQ892304.1
Zaire ebolavirus
Postigo Hidalgo,I., Drexler,J.F.
Charite Universitatsmedizin Berlin, Institute of virology
Germany
2023-05-13
CON2489
Orthoebolavirus zairense
Orthoebolavirus
Filoviridae
ssRNA(-)
18,765
GenBank
null
Guinea: Conakry
Guinea
Homo sapiens
null
2014-12-11
null
null
Zaire ebolavirus isolate CON2489, complete genome
GAATTTAAATTGAAATTGTTACTGTAATCATACCTGGTTTGTTTCAGAGCCATATCACCAAGATAGAGAACAACCTAGGTCTCCGGAGGGGGCAAGGGCATCAGTGTGCTCAGTTGAAAATCCCTTGTCAACATCTAGGCCTTATCACATCACAAGTTCCGCCTTAAACTCTGCAGGGTGATCCAACAACCTTAATAGCAACATTATTGTTAAAGGACAGCATTAGTTCACAGTCAAACAAGCAAGATTGGGAATTAACTTTGATTTTGAACCTGAACACCCAGAGGACTGGAGACTCAACAACCCTAAAGCCTGGGGTA...
15,932
OQ892305.1
Zaire ebolavirus
Postigo Hidalgo,I., Drexler,J.F.
Charite Universitatsmedizin Berlin, Institute of virology
Germany
2023-05-13
DUB2224
Orthoebolavirus zairense
Orthoebolavirus
Filoviridae
ssRNA(-)
18,765
GenBank
null
Guinea: Dubreka
Guinea
Homo sapiens
null
2014-11-30
null
null
Zaire ebolavirus isolate DUB2224, complete genome
GAATTTAAATTGAAATTGTTACTGTAATCATACCTGGTTTGTTTCAGAGCCATATCACCAAGATAGAGAACAACCTAGGTCTCCGGAGGGGGCAAGGGCATCAGTGTGCTCAGTTGAAAATCCCTTGTCAACATCTAGGCCTTATCACATCACAAGTTCCGCCTTAAACTCTGCAGGGTGATCCAACAACCTTAATAGCAACATTATTGTTAAAGGACAGCATTAGTTCACAGTCAAACAAGCAAGATTGAGAATTAACTTTGATTTTGAACCTGAACACCCAGAGGACTGGAGACTCAACAACCCTAAAGCCTGGGGTA...
15,933
OQ892306.1
Zaire ebolavirus
Postigo Hidalgo,I., Drexler,J.F.
Charite Universitatsmedizin Berlin, Institute of virology
Germany
2023-05-13
CON1508
Orthoebolavirus zairense
Orthoebolavirus
Filoviridae
ssRNA(-)
18,765
GenBank
null
Guinea: Conakry
Guinea
Homo sapiens
null
2014-10-17
null
null
Zaire ebolavirus isolate CON1508, complete genome
GAATTTAAATTGAAATTGTTACTGTAATCATACCTGGTTTGTTTCAGAGCCATATCACCAAGATAGAGAACAACCTAGGTCTCCGGAGGGGGCAAGGGCATCAGTGTGCTCAGTTGAAAATCCCTTGTCAACATCTAGGCCTTATCACATCACAAGTTCCGCCTTAAACTCTGCAGGGTGATCCAACAACCTTAATAGCAACATTATTGTTAAAGGACAGCATTAGTTCACAGTCAAACAAGCAAGATTGAGAATTAACTTTGATTTTGAACCTGAACACCCAGAGGACTGGAGACTCAACAACCCTAAAGCCTGGGGTA...
15,934
OQ892307.1
Zaire ebolavirus
Postigo Hidalgo,I., Drexler,J.F.
Charite Universitatsmedizin Berlin, Institute of virology
Germany
2023-05-13
CON1479
Orthoebolavirus zairense
Orthoebolavirus
Filoviridae
ssRNA(-)
18,765
GenBank
null
Guinea: Conakry
Guinea
Homo sapiens
null
2014-10-15
null
null
Zaire ebolavirus isolate CON1479, complete genome
GAATTTAAATTGAAATTGTTACTGTAATCATACCTGGTTTGTTTCAGAGCCATATCACCAAGATAGAGAACAACCTAGGTCTCCGGAGGGGGCAAGGGCATCAGTGTGCTCAGTTGAAAATCCCTTGTCAACATCTAGGCCTTATCACATCACAAGTTCCGCCTTAAACTCTGCAGGGTGATCCAACAACCTTAATAGCAACATTATTGTTAAAGGACAGCATTAGTTCACAGTCAAACAAGCAAGATTGAGAATTAACTTTGATTTTGAACCTGAACACCCAGAGGACTGGAGACTCAACAACCCTAAAGCCTGGGGTA...
15,935
NC_035889.1
Zika virus
Mlakar,J., Korva,M., Tul,N., Popovic,M., Poljsak-Prijatelj,M., Mraz,J., Kolenc,M., Resman Rus,K., Vesnaver Vipotnik,T., Fabjan Vodusek,V., Vizjak,A., Pizem,J., Petrovec,M., Avsic Zupanc,T.
National Center for Biotechnology Information, NIH
USA
2017-09-22
null
Orthoflavivirus zikaense
Orthoflavivirus
Flaviviridae
ssRNA(+)
10,808
RefSeq
1
Brazil: Rio Grande do Norte, Natal
Brazil
Homo sapiens
brain
2015
null
PRJNA485481
Zika virus isolate ZIKV/H. sapiens/Brazil/Natal/2015, complete genome
AGTTGTTGATCTGTGTGAATCAGACTGCGACAGTTCGAGTTTGAAGCGAAAGCTAGCAACAGTATCAACAGGTTTTATTTTGGATTTGGAAACGAGAGTTTCTGGTCATGAAAAACCCAAAAAAGAAATCCGGAGGATTCCGGATTGTCAATATGCTAAAACGCGGAGTAGCCCGTGTGAGCCCCTTTGGGGGCTTGAAGAGGCTGCCAGCCGGACTTCTGCTGGGTCATGGGCCCATCAGGATGGTCTTGGCAATTCTAGCCTTTTTGAGATTCACGGCAATCAAGCCATCACTGGGTCTCATCAATAGATGGGGTTCA...
4,276
NC_012532.1
Zika virus
Kuno,G., Chang,G.-J.J., Chang,G.J., Tsuchiya,K.R.
National Center for Biotechnology Information, NIH
USA
2009-04-06
null
Orthoflavivirus zikaense
Orthoflavivirus
Flaviviridae
ssRNA(+)
10,794
RefSeq
2
Uganda
Uganda
Simiiformes
null
null
null
PRJNA485481
Zika virus, complete genome
AGTTGTTGATCTGTGTGAGTCAGACTGCGACAGTTCGAGTCTGAAGCGAGAGCTAACAACAGTATCAACAGGTTTAATTTGGATTTGGAAACGAGAGTTTCTGGTCATGAAAAACCCCAAAGAAGAAATCCGGAGGATCCGGATTGTCAATATGCTAAAACGCGGAGTAGCCCGTGTAAACCCCTTGGGAGGTTTGAAGAGGTTGCCAGCCGGACTTCTGCTGGGTCATGGACCCATCAGAATGGTTTTGGCGATACTAGCCTTTTTGAGATTTACAGCAATCAAGCCATCACTGGGCCTTATCAACAGATGGGGTTCCG...
7,698
OQ338853.1
Zika virus
Loyola,L.A.C., Cinquini,I.J., Pour,S.Z., Cunha,M.P., Zanotto,P.M.A., Siqueira,C.M., Siqueira-Junior,J.B., Feres,V.C.R.
University of Sao Paulo, Department of Microbiology, Biomedical Sciences Institute
null
2024-01-26
20408F1/BrazilGO/2016
Orthoflavivirus zikaense
Orthoflavivirus
Flaviviridae
ssRNA(+)
10,693
GenBank
null
Brazil: Goias
Brazil
Homo sapiens
blood
2016-03-14
null
null
Zika virus isolate 20408F1/BrazilGO/2016, complete genome
CTGTGTGAATCAGACTGCGACAGTTCGAGTTTGAAGCGAAAGCTAGCAACAGTATCAACAGGTTTTATTTTGGATTTGGAAACGAGAGTTTCTGGTCATGAAAAACCCAAAAAAGAAATCCGGAGGATTCCGGATTGTCAATATGCTAAAACGCGGAGTAGCCCGTGTGAGCCCCTTTGGGGGCTTGAAGAGGCTGCCAGCCGGACTTCTGCTGGGTCATGGGCCCATCAGGATGGTCTTGGCGATTCTAGCCTTTTTGAGGTTCACGGCAATCAAGCCATCACTGGGTCTCATCAATAGATGGGGTTCAGTGGGGAAAA...
9,473
PP115590.1
Zika virus
Darmuzey,M., Kaptein,S.
KU Leuven, Laboratory of Virology and Chemotherapy (Rega Institute)
Belgium
2024-01-23
THA_139N
Orthoflavivirus zikaense
Orthoflavivirus
Flaviviridae
ssRNA(+)
10,747
GenBank
null
Thailand
Thailand
Homo sapiens
null
2014
null
null
Zika virus isolate THA_139N polyprotein (POLY) gene, complete cds
AGTTGTTGATCTGTGTGAATCAGACTGCGACAGTTCGAGTTTGAAGCGAAAGCTAGCAACAGTATCAACAGGTTTTATTTTGGATTTGGAAACGAGAGTTTCTGGTCATGAAAAACCCAAAAAAGAAATCCGGAGGATTCCGGATTGTCAATATGCTAAAACGCGGAGTAGCCCGTGTGAGCCCCTTTGGGGGCTTGAAGAGGCTGCCAGCCGGACTTCTGCTGGGTCATGGGCCCATCAGGATGGTCTTGGCGATTCTAGCCTTTTTGAGATTCACGGCAATCAAGCCATCACTGGGTCTCATCAATAGATGGGGTTCA...
9,554
ON123672.1
Zika virus
Cho,H., Oh,J.-W.
Yonsei University, Biotechnology
South Korea
2023-12-31
null
Orthoflavivirus zikaense
Orthoflavivirus
Flaviviridae
ssRNA(+)
10,807
GenBank
null
null
null
null
null
null
null
null
Zika virus strain MR766, complete genome
AGTTGTTGATCTGTGTGAGTCAGACTGCGACAGTTCGAGTCTGAAGCGAGAGCTAACAACAGTATCAACAGGTTTAATTTGGATTTGGAAACGAGAGTTTCTGGTCATGAAAAACCCAAAGAAGAAATCCGGAGGATTCCGGATTGTCAATATGCTAAAACGCGGAGTAGCCCGTGTAAACCCCTTGGGAGGTTTGAAGAGGTTGCCAGCCGGACTTCTGCTGGGTCATGGACCCATCAGAATGGTTTTGGCGATACTAGCCTTTTTGAGATTTACAGCAATCAAGCCATCACTGGGCCTTATCAACAGATGGGGTTCCG...
9,864
ON142671.1
Zika virus
Khongwichit,S., Thongmee,T., Vongpunsawad,S., Poovorawan,Y.
Chulalongkorn University, Pediatrics, Faculty of Medicine
Thailand
2023-12-01
BK2717
Orthoflavivirus zikaense
Orthoflavivirus
Flaviviridae
ssRNA(+)
10,608
GenBank
null
Thailand
Thailand
Homo sapiens
null
2020-01-17
null
null
Zika virus isolate BK2717, complete genome
TTTTGGATTTGGAAACGAGAGTTTCTGGTCATGAAAAACCCAAAAAGGAAATCCGGAGGATTCCGGATTGTCAATATGCTAAAACGCGGAGTAGCCCGTGTGAGCCCCTTTGGGGGCTTGAAGAGGCTGCCAGCCGGACTTCTGCTGGGCCATGGGCCCATCAGGATGGTCTTGGCGATTCTAGCCTTTTTGAGGTTCACGGCAATCAAGCCATCACTGGGTCTCATCAATAGATGGGGTTCAGTGGGGAAGAAAGAGGCTATGGAAATAATAAAGAAGTTCAAGAAAGATCTGGCTGCCATGCTGAGAATTATCAACGC...
10,478
ON142672.1
Zika virus
Khongwichit,S., Thongmee,T., Vongpunsawad,S., Poovorawan,Y.
Chulalongkorn University, Pediatrics, Faculty of Medicine
Thailand
2023-12-01
BK3007
Orthoflavivirus zikaense
Orthoflavivirus
Flaviviridae
ssRNA(+)
10,608
GenBank
null
Thailand
Thailand
Homo sapiens
null
2020-07-01
null
null
Zika virus isolate BK3007, complete genome
TTTTGGATTTGGAAACGAGAGTTTCTGGTCATGAAAAACCCAAAAAAGAAATCCGGAGGATTCCGGATTGTCAATATGCTAAAACGCGGAGTAGCCCGTGTGAGCCCCTTTGGGGGCTTGAAGAGGCTGCCAGCCGGACTTCTGCTGGGCCATGGGCCCATCAGGATGGTCTTGGCGATTCTAGCCTTTTTGAGGTTCACGGCAATCAAGCCATCACTGGGTCTCATCAATAGATGGGGTTCAGTGGGGAAAAAAGAGGCTATGGAAATAATAAAGAAGTTCAAGAAAGATCTGGCTGCCATGCTGAGAATAATCAATGC...
10,479
ON142673.1
Zika virus
Khongwichit,S., Thongmee,T., Vongpunsawad,S., Poovorawan,Y.
Chulalongkorn University, Pediatrics, Faculty of Medicine
Thailand
2023-12-01
AB3234
Orthoflavivirus zikaense
Orthoflavivirus
Flaviviridae
ssRNA(+)
10,608
GenBank
null
Thailand
Thailand
Homo sapiens
null
2020-10-09
null
null
Zika virus isolate AB3234, complete genome
TTTTGGATTTGGAAACGAGAGTTTCTGGTCATGAAAAACCCAAAAAAGAAATCCGGAGGATTCCGGATTGTCAATATGCTAAAACGCGGAGTAGCCCGTGTGAGCCCCTTTGGGGGCTTGAAGAGGCTGCCAGCCGGACTTCTGCTGGGCCATGGGCCCATCAGGATGGTCTTGGCGATTCTAGCCTTTTTGAGGTTCACGGCAATCAAGCCATCACTGGGTCTCATCAATAGATGGGGTTCAGTGGGGAAAAAAGAGGCTATGGAAATAATAAAGAAGTTCAAGAAAGATCTGGCTGCCATGCTGAGAATAATCAATGC...
10,480
ON142674.1
Zika virus
Khongwichit,S., Thongmee,T., Vongpunsawad,S., Poovorawan,Y.
Chulalongkorn University, Pediatrics, Faculty of Medicine
Thailand
2023-12-01
AB3502
Orthoflavivirus zikaense
Orthoflavivirus
Flaviviridae
ssRNA(+)
10,608
GenBank
null
Thailand
Thailand
Homo sapiens
null
2021-01-05
null
null
Zika virus isolate AB3502, complete genome
TTTTGGATTTGGAAACAAGAGTTTCTGGTCATGAAAAACCCAAAAAAGAAATCCGGAGGATTCCGGATTGTCAATATGCTAAAACGCGGAGTAGCCCGTGTGAGCCCCTTTGGGGGCTTGAAGAGGCTGCCAGCCGGACTTCTGCTGGGTCATGGGCCCATCAGGATGGTCTTGGCGATTCTAGCCTTTTTGAGATTCACGGCAATCAAGCCATCACTGGGTCTCATCAATAGATGGGGTTCAGTGGGGAAAAAAGAGGCTATGGAAATAATAAAGAAGTTCAAGAAAGATCTGGCTGCCATGCTGAGAATAATCAATGC...
10,481
OK569755.1
Zika virus
Marques,N.N., Molina,B.F., Bittar,C., Batista,M.N., Rahal,P.
UNESP, Biology
null
2023-10-14
null
Orthoflavivirus zikaense
Orthoflavivirus
Flaviviridae
ssRNA(+)
10,679
GenBank
null
null
null
null
null
null
null
null
Zika virus strain BeH815744, complete genome
ACAGTATCAACAGGTTTTATTTTGGATTTGGAAACGAGAGTTTCTGGTCATGAAAAACCCAAAAAAGAAATCCGGAGGATTCCGGATTGTCAATATGCTAAAACGCGGAGTAGCCCGTGTGAGCCCCTTTGGGGGCTTGAAGAGGCTGCCAGCCGGACTTCTGCTGGGTCATGGGCCCATCAGGATGGTCTTGGCGATTCTAGCCTTTTTGAGATTCACGGCAATCAAGCCATCACTGGGTCTCATCAATAGATGGGGTTCAGTGGGGAAAAAAGAGGCTATGGAAATAATAAAGAAGTTCAAGAAAGATCTGGCTGCCA...
12,030
OK569756.1
Zika virus
Marques,N.N., Molina,B.F., Bittar,C., Batista,M.N., Rahal,P.
UNESP, Biology
null
2023-10-14
null
Orthoflavivirus zikaense
Orthoflavivirus
Flaviviridae
ssRNA(+)
10,677
GenBank
null
null
null
null
null
null
null
null
Zika virus strain BeH815744, complete genome
ACAGTATCAACAGGTTTTATTTTGGATTTGGAAACGAGAGTTTCTGGTCATGAAAAACCCAAAAAAGAAATCCGGAGGATTCCGGATTGTCAATATGCTAAAACGCGGAGTAGCCCGTGTGAGCCCCTTTGGGGGCTTGAAGAGGCTGCCAGCCGGACTTCTGCTGGGTCATGGGCCCATCAGGATGGTCTTGGCGATTCTAGCCTTTTTGAGATTCACGGCAATCAAGCCATCACTGGGTCTCATCAATAGATGGGGTTCAGTGGGGAAAAAAGAGGCTATGGAAATAATAAAGAAGTTCAAGAAAGATCTGGCTGCCA...
12,031
OK569757.1
Zika virus
Marques,N.N., Molina,B.F., Bittar,C., Batista,M.N., Rahal,P.
UNESP, Biology
null
2023-10-14
null
Orthoflavivirus zikaense
Orthoflavivirus
Flaviviridae
ssRNA(+)
10,677
GenBank
null
null
null
null
null
null
null
null
Zika virus strain BeH815744, complete genome
ACAGTATCAACAGGTTTTATTTTGGATTTGGAAACGAGAGTTTCTGGTCATGAAAAACCCAAAAAAGAAATCCGGAGGATTCCGGATTGTCAATATGCTAAAACGCGGAGTAGCCCGTGTGAGCCCCTTTGGGGGCTTGAAGAGGCTGCCAGCCGGACTTCTGCTGGGTCATGGGCCCATCAGGATGGTCTTGGCGATTCTAGCCTTTTTGAGATTCACGGCAATCAAGCCATCACTGGGTCTCATCAATAGATGGGGTTCAGTGGGGAAAAAAGAGGCTATGGAAATAATAAAGAAGTTCAAGAAAGATCTGGCTGCCA...
12,032
OK569758.1
Zika virus
Marques,N.N., Molina,B.F., Bittar,C., Batista,M.N., Rahal,P.
UNESP, Biology
null
2023-10-14
null
Orthoflavivirus zikaense
Orthoflavivirus
Flaviviridae
ssRNA(+)
10,656
GenBank
null
null
null
null
null
null
null
null
Zika virus strain MR 766, complete genome
ACAGTATCAACAGGTTTAATTTGGATTTGGAACGAGAGTTTCTGGTCATGAAAAACCCAAAGAAGAAATCCGGAGGATTCCGGATTGTCAATATGCTAAAACGCGGAGTAGCCCGTGTAAACCCCTTGGGAGGTTTGAAGAGGTTGCCAGCCGGACTTCTGCTGGGTCATGGACCCATCAGAATGGTTTTGGCGATACTAGCCTTTTTGAGATTTACAGCAATCAAGCCATCACTGGGCCTTATCAACAGATGGGGTTCCGTGGGGAAAAAAGAGGCTATGGAAATAATAAAGAAGTTCAAGAAAGATCTTGCTGCCATG...
12,033
OK569759.1
Zika virus
Marques,N.N., Molina,B.F., Bittar,C., Batista,M.N., Rahal,P.
UNESP, Biology
null
2023-10-14
null
Orthoflavivirus zikaense
Orthoflavivirus
Flaviviridae
ssRNA(+)
10,639
GenBank
null
null
null
null
null
null
null
null
Zika virus strain MR 766, complete genome
GGAACGAGAGTTTCTGGTCATGAAAAACCCAAAGAAGAAATCCGGAGGATTCCGGATTGTCAATATGCTAAAACGCGGAGTAGCCCGTGTAAACCCCTTGGGAGGTTTGAAGAGGTTGCCAGCCGGACTTCTGCTGGGTCATGGACCCATCAGAATGGTTTTGGCGATACTAGCCTTTTTGAGATTTACAGCAATCAAGCCATCACTGGGCCTTATCAACAGATGGGGTTCCGTGGGGAAAAAAGAGGCTATGGAAATAATAAAGAAGTTCAAGAAAGATCTTGCTGCCATGTTGAGAATAATCAATGCTAGGAAAGAGA...
12,034
OK569760.1
Zika virus
Marques,N.N., Molina,B.F., Bittar,C., Batista,M.N., Rahal,P.
UNESP, Biology
null
2023-10-14
null
Orthoflavivirus zikaense
Orthoflavivirus
Flaviviridae
ssRNA(+)
10,635
GenBank
null
null
null
null
null
null
null
null
Zika virus strain MR 766, complete genome
GGAACGAGAGTTTCTGGTCATGAAAAACCCAAAGAAGAAATCCGGAGGATTCCGGATTGTCAATATGCTAAAACGCGGAGTAGCCCGTGTAAACCCCTTGGGAGGTTTGAAGAGGTTGCCAGCCGGACTTCTGCTGGGTCATGGACCCATCAGAATGGTTTTGGCGATACTAGCCTTTTTGAGATTTACAGCAATCAAGCCATCACTGGGCCTTATCAACAGATGGGGTTCCGTGGGGAAAAAAGAGGCTATGGAAATAATAAAGAAGTTCAAGAAAGATCTTGCTGCCATGTTGAGAATAATCAATGCTAGGAAAGAGA...
12,035
OQ661912.1
Zika virus
Klungthong,C., Chinnawirotpisan,P., Manasatienkij,W., Poolpanichupatam,Y., Hussem,K., Lohachanakul,J., Buddhari,D., Suntarattiwong,P., Watanaveeradej,V., Suwanpakdee,D., Chuenchitra,T., Chusri,S., Buathong,R., Fernandez,S., Macareo,L.R.
USAMD-AFRIMS, Virology
Thailand
2023-04-04
00583/17
Orthoflavivirus zikaense
Orthoflavivirus
Flaviviridae
ssRNA(+)
10,699
GenBank
null
Thailand
Thailand
Homo sapiens
null
2017-08-22
null
null
Zika virus isolate 00583/17, complete genome
GAATCAGACTGCGACAGTTCGAGTTTGAAGCGAAAGCTAGCAACAGTATCAACAGGTTTTATTTTGGATTTGGAAACGAGAGTTTCTGGTCATGAAAAACCCAAAAAAGAAATCCGGAGGATTCCGGATTGTCAATATGCTAAAACGCGGAGTAGCCCGTGTGAGCCCCTTTGGGGGCTTGAAGAGGCTGCCAGCCGGACTTCTGCTGGGCCATGGGCCCATCAGGATGGTCTTGGCGATTCTAGCCTTTTTGAGGTTCACGGCAATCAAGCCATCACTGGGTCTCATCAATAGATGGGGTTCAGTGGGGAAAAAAGAGG...
16,940
OQ661913.1
Zika virus
Klungthong,C., Chinnawirotpisan,P., Manasatienkij,W., Poolpanichupatam,Y., Hussem,K., Lohachanakul,J., Buddhari,D., Suntarattiwong,P., Watanaveeradej,V., Suwanpakdee,D., Chuenchitra,T., Chusri,S., Buathong,R., Fernandez,S., Macareo,L.R.
USAMD-AFRIMS, Virology
Thailand
2023-04-04
30634/17
Orthoflavivirus zikaense
Orthoflavivirus
Flaviviridae
ssRNA(+)
10,699
GenBank
null
Thailand
Thailand
Homo sapiens
null
2017-07-11
null
null
Zika virus isolate 30634/17, complete genome
GAATCAGACTGCGACAGTTCGAGTTTGAAGCGAAAGCTAGCAACAGTATCAACAGGTTTTATTTTGGATTTGGAAACGAGAGTTTCTGGTCATGAAAAACCCAAAAAAGAAATCCGGAGGATTCCGGATTGTCAATATGCTAAAACGCGGAGTAGCCCGTGTGAGCCCCTTTGGGGGCTTGAAGAGGCTGCCAGCCGGACTTCTGCTGGGCCATGGGCCCATCAGGATGGTCTTGGCGATTCTAGCCTTTTTGAGGTTCACGGCAATCAAGCCATCACTGGGTCTCATCAATAGATGGGGTTCAGTGGGGAAAAAAGAGG...
16,941
OQ661914.1
Zika virus
Klungthong,C., Chinnawirotpisan,P., Manasatienkij,W., Poolpanichupatam,Y., Hussem,K., Lohachanakul,J., Buddhari,D., Suntarattiwong,P., Watanaveeradej,V., Suwanpakdee,D., Chuenchitra,T., Chusri,S., Buathong,R., Fernandez,S., Macareo,L.R.
USAMD-AFRIMS, Virology
Thailand
2023-04-04
30790/11
Orthoflavivirus zikaense
Orthoflavivirus
Flaviviridae
ssRNA(+)
10,699
GenBank
null
Thailand
Thailand
Homo sapiens
null
2011-07-04
null
null
Zika virus isolate 30790/11, complete genome
GAATCAGACTGCGACAGTTCGAGTTTGAAGCGAAAGCTAGCAACAGTATCAACAGGTTTTATTTTGGATTTGGAAACGAGAGTTTCTGGTCATGAAAAACCCAAAAAAGAAATCCGGAGGATTCCGGATTGTCAATATGCTAAAACGCGGAGTAGCCCGTGTGAGCCCCTTTGGGGGCTTGAAGAGGCTGCCAGCCGGACTTCTGCTGGGTCATGGGCCCATCAGGATGGTCTTGGCGATTCTAGCCTTTTTGAGATTCACAGCAATCAAGCCATCGCTGGGTCTCATCAATAGATGGGGTTCAGTGGGGAAAAAAGAGG...
16,942
OQ661915.1
Zika virus
Klungthong,C., Chinnawirotpisan,P., Manasatienkij,W., Poolpanichupatam,Y., Hussem,K., Lohachanakul,J., Buddhari,D., Suntarattiwong,P., Watanaveeradej,V., Suwanpakdee,D., Chuenchitra,T., Chusri,S., Buathong,R., Fernandez,S., Macareo,L.R.
USAMD-AFRIMS, Virology
Thailand
2023-04-04
31488/13
Orthoflavivirus zikaense
Orthoflavivirus
Flaviviridae
ssRNA(+)
10,699
GenBank
null
Thailand
Thailand
Homo sapiens
null
2013-08-19
null
null
Zika virus isolate 31488/13, complete genome
GAATCAGACTGCGACAGTTCGAGTTTGAAGCGAAAGCTAGCAACAGTATCAACAGGTTTTATTTTGGATTTGGAAACGAGAGTTTCTGGTCATGAAAAACCCAAAAAAGAAATCCGGAGGATTCCGGATTGTCAATATGCTAAAACGCGGAGTAGCCCGTGTGAGCCCCTTTGGGGGCTTGAAGAGGCTGCCAGCCGGACTTCTGCTGGGTCATGGGCCCATCAGGATGGTCTTGGCGATTCTAGCCTTTTTGAGATTCACAGCAATCAAGCCATCGCTGGGTCTCATCAATAGATGGGGTTCAGTGGGGAAAAAAGAGG...
16,943
OQ661916.1
Zika virus
Klungthong,C., Chinnawirotpisan,P., Manasatienkij,W., Poolpanichupatam,Y., Hussem,K., Lohachanakul,J., Buddhari,D., Suntarattiwong,P., Watanaveeradej,V., Suwanpakdee,D., Chuenchitra,T., Chusri,S., Buathong,R., Fernandez,S., Macareo,L.R.
USAMD-AFRIMS, Virology
Thailand
2023-04-04
RTA-SR-U-A124
Orthoflavivirus zikaense
Orthoflavivirus
Flaviviridae
ssRNA(+)
10,699
GenBank
null
Thailand
Thailand
Homo sapiens
null
2016-09-12
null
null
Zika virus isolate RTA-SR-U-A124, complete genome
GAATCAGACTGCGACAGTTCGAGTTTGAAGCGAGAGCTAGCAACAGTATCAACAGGTTTTATTTTGGATTTGGAAACGAGAGTTTCTGGTCATGAAAAACCCAAAAAAGAAATCCGGAGGATTCCGGATTGTCAATATGCTAAAACGCGGAGTAGCCCGTGTGAGCCCCTTTGGGGGCTTGAAGAGGCTGCCAGCCGGACTTCTGCTGGGTCATGGGCCCATCAGGATGGTCTTGGCGATTCTAGCCTTTTTGAGATTCACGGCAATCAAGCCATCACTGGGTCTCATCAATAGATGGGGTTCAGTGGGGAAAAAAGAGG...
16,944
OR026172.1
Zophobas morio black wasting virus
Penzes,J.J., Holm,M., Firlar,E., Kaelber,J.T.
Rutgers University, Institute for Quantitative Biomedicine
USA
2023-08-13
null
Zophobas morio black wasting virus
null
Parvoviridae
ssDNA(+/-)
5,434
GenBank
null
USA
USA
Zophobas morio
null
2023-03
null
null
Zophobas morio black wasting virus strain Arkansas-morio, complete genome
TATACCCAAATGGTGACCTTGAAACCATGGTATACCATGTAAATAGACTATTTACATGGTAACCATGGTTTCAAGGTCACCATTTGGGTATAAATAGATCTGGTCGTCGTCGCAGTCGTCAGTGATAAGCCAGGGGCTTATGGGCAAGCACCAAGTAAGGGAGATAAAGTGAAGTGTATAAATAGTGTTCAACATGTAAGTAGCTCATTCTGTTGTTGTATTTCGTGCAGTGCAGTAATACTTTGGTTTGGTAAGTAGGTTTAAACATAAGAAGATATATCACCCTCAGAGCTTGTATGACATGACTAAGAAGAAGGTAA...
14,022
OR026174.1
Zophobas morio black wasting virus
Penzes,J.J., Holm,M., Firlar,E., Kaelber,J.T.
Rutgers University, Institute for Quantitative Biomedicine
USA
2023-08-13
null
Zophobas morio black wasting virus
null
Parvoviridae
ssDNA(+/-)
5,460
GenBank
null
USA
USA
Zophobas morio
null
2023-03
null
null
Zophobas morio black wasting virus strain Indiana-morio, complete genome
GACGACGACCAGATCTATTTATACCCAATGGTGACCTTGGAAACCATGGTATACCATGTAAATTTTCTATTTACATGGTATACCATGGTTTCCAAGGTCACCATTGGGTATAAATAGATCTGGTCGTCGTCGCAGTCGTCAGTGATAAGCCAGGGGCTTATGGGCAAGCACCAAGTAAGGGGGATAAAGTGAAGTGTATAAATAGTGTTCAACATGTAAGTAGCTCATTCTGTTGTTGTATTTCGTGCAGTGCAGTAATACTTTGGTTTGGTAAGTAGGTTTAAACATAAGAAGATATATCACCCTCAGAGCTTGTATGA...
14,023
OR026175.1
Zophobas morio black wasting virus
Penzes,J.J., Holm,M., Firlar,E., Kaelber,J.T.
Rutgers University, Institute for Quantitative Biomedicine
USA
2023-08-13
null
Zophobas morio black wasting virus
null
Parvoviridae
ssDNA(+/-)
5,463
GenBank
null
USA
USA
Tenebrio molitor
null
2022-09
null
null
Zophobas morio black wasting virus strain Louisiana-molitor, complete genome
GACGACGACCAGATCTATTTATACCCAATGGTGACCTTGGAAACCATGGTATACCATGTAAATAGTAAATTTACATGGTATACCATGGTTTCCAAGGTCACCATTGGGTATAAATAGATCTGGTCGTCGTCGCAGTCGTCAGTGATAAGCCAGGGGCTTATGGGCAAGCACCAAGTAAGGGAGATAAAGTGAAGTGTATAAATAGTGTTCAACATGTAAGTAGCTCATTCTGTTGTTGTATTTCGTGCAGTCCAGTAACACTTTGGTTTGGTAAGTAGGTTTAAACATAAGAAGATATATCACCCTCAGAGCTTGTATGA...
14,024