Accession
stringlengths
8
11
Organism_Name
stringlengths
10
53
Submitters
stringlengths
4
2.42k
⌀
Organization
stringlengths
3
234
⌀
Org_location
stringlengths
3
24
⌀
Release_Date
stringlengths
10
10
Isolate
stringlengths
1
75
⌀
Species
stringlengths
10
53
⌀
Genus
stringlengths
7
22
⌀
Family
stringlengths
10
19
⌀
Molecule_type
stringclasses
14 values
Length
int64
5k
95.4k
Sequence_Type
stringclasses
2 values
Publications
float64
1
134
⌀
Geo_Location
stringlengths
3
88
⌀
Country
stringlengths
3
32
⌀
Host
stringlengths
3
64
⌀
Isolation_Source
stringlengths
3
31
⌀
Collection_Date
stringlengths
4
10
⌀
BioSample
stringlengths
12
14
⌀
BioProject
stringlengths
9
23
⌀
GenBank_Title
stringlengths
22
320
Sequence
stringlengths
5k
95.4k
__index_level_0__
int64
39
112k
OK181482.1
rhinovirus A39
Greninger,A.L., Xie,H., Cruz,K., Phung,Q., Lin,M.J.
UW Virology, DLMP
USA
2021-09-28
null
Rhinovirus A
Enterovirus
Picornaviridae
ssRNA(+)
7,047
GenBank
null
USA
USA
Homo sapiens
null
2021
SAMN20933045
PRJNA723895
Rhinovirus A39 strain RvA39/USA/2021/KBN38P, complete genome
CCAAATGTAACTTAGAAGCAAGCACAAACGTCCAATAGGCGGTGATTATCCAAATCACTTACGGACAAGCACTTCTGTCTCCCCGGTAACTGCTGATATGCTCCAACAGGGCAAAAACAGCGGGAATCGTTATCCGCAAAATGCCTACACAAAGCCTAGTATCACTCTAGAAGGTGTGTGGCTGGTCGCTCAACCGTGAACCTGACGGTAGACCTGGCAGATGAGGCTAGAAATACCCCACTGGCGACAGTGTTCTAGCCTGCGTGGCTGCCTGCACACCCTCACGGGTGTGAAGCCATTCATTGGACAGGGTGAGAAGA...
37,705
OK181497.1
rhinovirus A39
Greninger,A.L., Xie,H., Cruz,K., Phung,Q., Lin,M.J.
UW Virology, DLMP
USA
2021-09-28
null
Rhinovirus A
Enterovirus
Picornaviridae
ssRNA(+)
7,047
GenBank
null
USA
USA
Homo sapiens
null
2021-06-18
SAMN20933089
PRJNA1066815
Rhinovirus A39 strain RvA39/USA/2021/UMLKGB, complete genome
CCAAATGTAACTTAGAAGCAAGCACAAACGTCCAATAGGCGGTGATTATCCAAATCACTTACGGACAAGCACTTCTGTCTCCCCGGTAACTGCTGATATGCTCCAACAGGGCAAAAACAGCGGGAATCGTTATCCGCAAAATGCCTACACAAAGCCTAGTATCACTCTAGAAGGTGTGTGGCTGGTCGCTCAACCGTGAACCTGACGGTAGACCTGGCAGATGAGGCTAGAAATACCCCACTGGCGACAGTGTTCTAGCCTGCGTGGCTGCCTGCACACCCTCACGGGTGTGAAGCCATTCATTGGACAGGGTGAGAAGA...
37,720
MZ670581.1
rhinovirus A39
Greninger,A.L., Xie,H., Cruz,K., Phung,Q., Lin,M.J.
UW Virology, DLMP
USA
2021-09-07
null
Rhinovirus A
Enterovirus
Picornaviridae
ssRNA(+)
7,037
GenBank
null
USA
USA
Homo sapiens
null
2021-06-09
SAMN20216612
PRJNA1066815
Rhinovirus A39 strain RvA39/USA/2021/DUMLQU, complete genome
CCAAATGTAACTTAGAAGCAAGCACAAACGTCCAATAGGCGGTGATTTTCCAAATCACTTACGGACAAGCACTTCTGTCTCCCCGGTAACTGCTGATATGCTCCAACAGGGCAAAAACAGCGGGAATCGTTATCCGCAAAATGCCTACACAAAGCCTAGTATCACTCTAGAAGGTGTGTGGCTGGTCGCTCAACCGTGAACCTGACGGTAGACCTGGCAGATGAGGCTAGAAATACCCCACTGGCGACAGTGTTCTAGCCTGCGTGGCTGCCTGCACACCCTCACGGGTGTGAAGCCATTCATTGGACAGGGTGAGAAGA...
38,118
OM001467.1
rhinovirus A46
Greninger,A.L., Xie,H., Cruz,K., Sereewit,J., Phung,Q., Lin,M.J.
UW Virology, DLMP
USA
2022-01-04
null
Rhinovirus A
Enterovirus
Picornaviridae
ssRNA(+)
7,103
GenBank
null
USA
USA
Homo sapiens
null
2021
SAMN24255374
PRJNA723895
Rhinovirus A46 strain RvA46/USA/2021/YU9LWX, complete genome
CATGTGGAGTAGTACTCTATTATTCCGGTAATTTTGTACGCCAGTTTTATAACCCCTACCCCAAGCAACTTAGAAGATAAGCACACTCGACCAATAGTGGGTGATTATCCAAATCATCAAAGGTCAAGCACTTCTGTTTCCCCGGTTGAAGTTGATATGCTCCACCAGGGCAAAAACAACTGAGATCGTTATCCGCAAAATGCCTACACAAAGCCTAGTATCATCTTGAAAGGCGCAGAGTTGGTCGTTCCGCTATTCCCCATAGTAGACCTGGCAGATGAGGCTAGAAAACCCCCACTGGCGACAGTGTTCTAGCCTGC...
34,254
OK254831.1
rhinovirus A46
Greninger,A.L., Xie,H., Cruz,K., Phung,Q., Lin,M.J.
UW Virology, DLMP
USA
2021-12-11
null
Rhinovirus A
Enterovirus
Picornaviridae
ssRNA(+)
7,118
GenBank
null
USA
USA
Homo sapiens
null
2021-06-22
SAMN21173567
PRJNA1066815
Rhinovirus A46 strain RvA46/USA/2021/5MXX66, complete genome
TCCCACCCAGATTTCCCATGTGGAGTAGTACTCTATTATTCCGGTAATTTTGTACGCCAGTTTTATAACCCCTACCCCAAGCAACTTAGAAGATAAGCACACTCGACCAATAGTGGGTGATTATCCAAATCATCAAAGGTCAAGCACTTCTGTTTCCCCGGTTGAAGTTGATATGCTCCACCAGGGCAAAAACAACTGAGATCGTTATCCGCAAAATGCCTACACAAAGCCTAGTATCATCTTGAAAGGCGCAGAGTTGGTCGTTCCGCTATTCCCCATAGTAGACCTGGCAGATGAGGCTAGAAAACCCCCACTGGCGA...
35,272
OK181462.1
rhinovirus A46
Greninger,A.L., Xie,H., Cruz,K., Phung,Q., Lin,M.J.
UW Virology, DLMP
USA
2021-09-28
null
Rhinovirus A
Enterovirus
Picornaviridae
ssRNA(+)
7,105
GenBank
null
USA
USA
Homo sapiens
null
2021-06-17
SAMN20932996
PRJNA1066815
Rhinovirus A46 strain RvA46/USA/2021/9QUT2Q, complete genome
CATGTGGAGTAGTACTCTATTATTCCGGTAATTTTGTACGCCAGTTTTATAACCCCTACCCCAAGCAACTTAGAAGATAAGCACACTCGACCAATAGTGGGTGATTATCCAAATCATCAAAGGTCAAGCACTTCTGTTTCCCCGGTTGAAGTTGATATGCTCCACCAGGGCAAAAACAACTGAGATCGTTATCCGCGAAATGCCTACACAAAGCCTAGTATCATCTTGAAAGGCGCAGAGTTGGTCGTTCCGCTATTCCCCATAGTAGACCTGGCAGATGAGGCTAGAAAACCCCCACTGGCGACAGTGTTCTAGCCTGC...
37,686
MZ629120.1
rhinovirus A46
Greninger,A.L., Xie,H., Cruz,K., Phung,Q., Lin,M.J.
UW Virology, DLMP
USA
2021-08-08
null
Rhinovirus A
Enterovirus
Picornaviridae
ssRNA(+)
7,146
GenBank
null
USA
USA
Homo sapiens
null
2021-06-01
SAMN20216558
PRJNA1066815
Rhinovirus A46 strain RvA46/USA/2021/6EEDHN, complete genome
TTAAAACTGAATCTGGGTTGTTCCCACCCAGATTTCCCATGTGGAGTAGTACTCTATTATTCCGGTAATTTTGTACGCCAGTTTTATAACCCCTACCCTAAGCAACTTAGAAGATAAGCACACTCGACCAATAGTGGGTGATTATCCAAATCATCAAAGGTCAAGCACTTCTGTTTCCCCGGTTGAAGTTGATATGCCCCACCAGGGCAAAAACAACTGAGATCGTTATCCGCAAAATGCCTACACAAAGCCTAGTATCATCTTGAAAGGCGCAGAGTTGGTCGTTCCGCTATTCCCCATAGTAGACCTGGCAGATGAGG...
39,595
MZ629147.1
rhinovirus A46
Greninger,A.L., Xie,H., Cruz,K., Phung,Q., Lin,M.J.
UW Virology, DLMP
USA
2021-08-08
null
Rhinovirus A
Enterovirus
Picornaviridae
ssRNA(+)
7,146
GenBank
null
USA
USA
Homo sapiens
null
2021-06-05
SAMN20216640
PRJNA1066815
Rhinovirus A46 strain RvA46/USA/2021/L2824D, complete genome
TTAAAACTGAATCTGGGTTGTTCCCACCCAGATTTCCCATGTGGAGTAGTACTCTATTATTCCGGTAATTTTGTACGCCAGTTTTATAACCCCTACCCTAAGCAACTTAGAAGATAAGCACACTCGACCAATAGTGGGTGATTATCCAAATCATCAAAGGTCAAGCACTTCTGTTTCCCCGGTTGAAGTTGATATGCCCCACCAGGGCAAAAACAACTGAGATCGTTATCCGCAAAATGCCTACACAAAGCCTAGTATCATCTTGAAAGGCGCAGAGTTGGTCGTTCCGCTATTCCCCATAGTAGACCTGGCAGATGAGG...
39,622
DQ473506.1
rhinovirus A46
Kistler,A.L., Webster,D.R., Rouskin,S., Magrini,V., Credle,J.J., Schnurr,D.P., Boushey,H.A., Mardis,E.R., Li,H., DeRisi,J.L., Webster,D., Reich,S., Credle,J., Schnurr,D., Boushey,H., Mardis,E., Ganem,D., DeRisi,J.
University of California, San Francisco, Biochemistry and Biophysics
USA
2007-05-07
null
Rhinovirus A
Enterovirus
Picornaviridae
ssRNA(+)
7,149
GenBank
1
USA
USA
null
null
null
null
null
Rhinovirus A46, complete genome
TTAAAACTGGATCTGGGTTGTTCCCACCCAGATTTCCCATGTGGAGTAGTACTCTATTATTCCGGTAATTTTGTACGCCAGTTTTATATTCCCTACCCCGAGTAACTTAGAAGATAAGCACACAAGGCCAATAGTGGGTGATTAGCCAAATCATCAAAGGTCAAGCACTTCTGTTTCCCCCGGTCAAGGTTGATATGCTCTACCAGGGCAAAAACAACTGAGATCGTTATCCGCAAAATGCCTACACAAAGCCTAGTATCATCTTGGAAGGCACAGAGTTGGTCGCTCCACTATTCCCCATAGTAGACCTGGCAGATGAG...
107,199
OM001356.1
rhinovirus A47
Greninger,A.L., Xie,H., Cruz,K., Sereewit,J., Phung,Q., Lin,M.J.
UW Virology, DLMP
USA
2022-01-04
null
Rhinovirus A
Enterovirus
Picornaviridae
ssRNA(+)
7,065
GenBank
null
USA
USA
Homo sapiens
null
2021-07-02
SAMN24289196
PRJNA1066815
Rhinovirus A47 strain RvA47/USA/2021/2PQQ7Q, complete genome
TGTGGAGTAGTACACTGTTATTACGGTAACCTTGTACGCCAGTTTTATCACCCCTTCCCCTTGTAACTTAGAAGTTATAAACTCAAGACCAATAGGCGGTGATCAACCAGATCACTAAAGGTCAAGCACTTCTGTTTCCCCGGTCAACGCTGATATGCTCCACCAGGGCAAAAACAGCTGCGATCGTTATCCGCAAAGTGCCTACGCAAAGCCTAGTAATATCTTGAATGATATATGGTTGGTCGTTCAGCTAAACCCCATAGTAGACCTGGCAGATGAGGCTGGAAATTCCCCACTGGCGACAGTGTTCCAGCCTGCGT...
34,144
OM001387.1
rhinovirus A47
Greninger,A.L., Xie,H., Cruz,K., Sereewit,J., Phung,Q., Lin,M.J.
UW Virology, DLMP
USA
2022-01-04
null
Rhinovirus A
Enterovirus
Picornaviridae
ssRNA(+)
7,059
GenBank
null
USA
USA
Homo sapiens
null
2021-07-06
SAMN24289227
PRJNA1066815
Rhinovirus A47 strain RvA47/USA/2021/P7ZHVJ, complete genome
TGTGGAGTAGTACACTGTTATTACGGTAACCTTGTACGCCAGTTTTATCACCCCTTNCCCCTTGTAACTTAGAAGCTATAAACTTAAGACCAATAGGCGGTGATCAACCAGATCACTAAAGGTCAAGCACTTCTGTTTCCCCGGTCAACGCTGATATGCTCCACCAGGGCAAAAACAGCTGCGATCGTTATCCGCAAAGTGCCTACGCAAAGCCTAGTAATATCTTGAATGATATATGGTTGGTCGTTCAGCTAAACCCCATAGTAGACCTGGCAGATGAGGCTGGAAATTCCCCACTGGCGACAGTGTTCCAGCCTGCG...
34,175
OM001400.1
rhinovirus A47
Greninger,A.L., Xie,H., Cruz,K., Sereewit,J., Phung,Q., Lin,M.J.
UW Virology, DLMP
USA
2022-01-04
null
Rhinovirus A
Enterovirus
Picornaviridae
ssRNA(+)
7,062
GenBank
null
USA
USA
Homo sapiens
null
2021-06-21
SAMN24255307
PRJNA1066815
Rhinovirus A47 strain RvA47/USA/2021/6A42AC, complete genome
TGTGGAGTAGTACACTGTTATTACGGTAACCTTGTACGCCAGTTTTATCACCCCTTCCCCTTGTAACTTAGAAGTTATAAACTCAAGACCAATAGGCGGTGATCAACCAGATCACTAAAGGTCAAGCACTTCTGTTTCCCCGGTCAACGCTGATATGCTCCACCAGGGCAAAAACAGCTGCGATCGTTATCCGCAAAGTGCCTACGCAAAGCCTAGTAATATCTTAAATGATATATGGTTGGTCGTTCAGCTAAACCCCATAGTAGACCTGGCAGATGAGGCTGGAAATTCCCCACTGGCGACAGTGTTCCAGCCTGCGT...
34,188
OM001448.1
rhinovirus A47
Greninger,A.L., Xie,H., Cruz,K., Sereewit,J., Phung,Q., Lin,M.J.
UW Virology, DLMP
USA
2022-01-04
null
Rhinovirus A
Enterovirus
Picornaviridae
ssRNA(+)
7,062
GenBank
null
USA
USA
Homo sapiens
null
2021
SAMN24255355
PRJNA723895
Rhinovirus A47 strain RvA47/USA/2021/T4J636, complete genome
TGTGGAGTAGTACACTGTTATTACGGTAACCTTGTACGCCAGTTTTATCACCCCTTNCCCCTTGTAACTTAGAAGTTATAAACTCAAGACCAATAGGCGGTGATCAACCAGATCACTAAAGGTCAAGCACTTCTGTTTCCCCGGTCAACGCTGATATGCTCCACCAGGGCAAAAACAGCTGCGATCGTTATCCGCAAAGTGCCTACGCAAAGCCTAGTAATATCTTGAATGATATATGGTTGGTCGTTCAGCTAAACCCCATAGTAGACCTGGCAGATGAGGCTGGAAATTCCCCACTGGCGACAGTGTTCCAGCCTGCG...
34,235
KY369890.1
rhinovirus A47
Greninger,A.L., Makhsous,N., Kuypers,J.M., Shean,R.C., Jerome,K.R.
UW, Lab Medicine
USA
2017-01-15
null
Rhinovirus A
Enterovirus
Picornaviridae
ssRNA(+)
7,028
GenBank
null
USA
USA
Homo sapiens
null
2016
SAMN07309838
PRJNA338014
Rhinovirus A47 strain SC122, complete genome
TGTGGAGTAGTACACTGTTATTACGGTAACCTTGTACGCCAGTTTTATCACCCCTTCCCCCTTGTAACTTAGAAGTTATAAACTCGAGACCAATAGGCAGTGATCAACCAGATCACTAAAGGTCAAGCACTTCTGTTTCCCCGGTCAACGCTGATATGCTCCACCAGGGCAAAAACAGCCGCGATCGTTATCCGCAAAGTGCCTACGCAAAGCCTAGTAATATCTTGAATGATGTATGGTTGGTCGTTCAGCTAAACCCCATAGTAGACCTGGCAGATGAGGCTGGAAATTCCCCACTGGCGACAGTGTTCCAGCCTGCG...
78,644
FJ445133.1
rhinovirus A47
Palmenberg,A.C., Spiro,D., Kuzmickas,R., Wang,S., Djikeng,A., Rathe,J.A., Fraser-Liggett,C.M., Liggett,S.B., Overton,L., Tsitrin,T., Gallagher,T., Liu,J., Pushparaj,V., Tallon,L.J.
University of Maryland School of Medicine
USA
2009-02-13
null
Rhinovirus A
Enterovirus
Picornaviridae
ssRNA(+)
7,132
GenBank
1
null
null
null
null
null
null
PRJNA32533
Human rhinovirus 47 strain ATCC VR-1157, complete genome
TTAAAACTGGGTGTGGGTTGTTCCCACCCACACCTCCCACGTGGAGTAGTACACTGTTATCACGGTAATTTTGTACGCCAGTTTTATAACCCCTTTCCCTTTTGTAACTTAGAAGTTTGAACTTGAGACCMATAGGCGGTGGTCAACCAGATCACTAAAGGTCAAGCACTTCTGTTTCCCCGGTCAACGTTGATATGCTCCAGCAGGGCAAAAACAGYTGCGATCGTTATCCGCAAAGTGCCTACGCAAAGCTTAGTAACATCTTGAATGATATATGGTTGGTCGTTCCACTAAACCCCATAGTAGACCTGGCAGATGAG...
103,701
OL961540.1
rhinovirus A49
Greninger,A.L., Xie,H., Cruz,K., Sereewit,J., Phung,Q., Lin,M.J.
UW Virology, DLMP
USA
2022-01-04
null
Rhinovirus A
Enterovirus
Picornaviridae
ssRNA(+)
7,056
GenBank
null
USA
USA
Homo sapiens
null
2021-05-27
SAMN23789528
PRJNA1066815
Rhinovirus A49 strain RvA49/USA/2021/QYDYAG, complete genome
CTGTTATTACGGTAACTTTGTACGCCAGTTTTATCCTCCCTTTACCCCATGCAACTTAGAAGTTTTTCATAAAGACCAATAGTTGGTAATCATCCAGATTACTTAAGGTCAAGCACTTCTGTTTCCCCGGTCAACGTTGATATGCTCCAACAGGGCAAAAACAACTGCGATCGTTATCCGCAAAGCGCCTACGCAAAGCCTAGTAGCGCCTTTGAGATTATTTGGTTGGTCGTTCCGCCATTTCCCCTGGTAGACCTGGCAGATGAGGCTGGAAGTACCCCACTGGCGACAGTGTTCCAGCCTGCGTGGCTGCCTGCACA...
34,121
OM001351.1
rhinovirus A49
Greninger,A.L., Xie,H., Cruz,K., Sereewit,J., Phung,Q., Lin,M.J.
UW Virology, DLMP
USA
2022-01-04
null
Rhinovirus A
Enterovirus
Picornaviridae
ssRNA(+)
7,054
GenBank
null
USA
USA
Homo sapiens
null
2021-06-22
SAMN24288767
PRJNA1066815
Rhinovirus A49 strain RvA49/USA/2021/LVAT6B, complete genome
CTGTTATTACGGTAACTTTGTACGCCGGTTTTATCCTCCCCTTACCCCATGCAACTTAGAAGTTTTTCATAAAGACCAATAGTTGGTAATCATCCAGATTACTTAAGGTCAAGCACTTCTGTTTCCCCGGTCAACGTTGATATGCTCCAACAGGGCAAAAACAACTGCGATCGTTATCCGCAAAGCGCCTACGCAAAGCCTAGTAGCGCCTTTGAGATTATTTGGTTGGTCGTTCCGCCACTTCCCCTGGTAGACCTGGCAGATGAGGCTGGAAGTACCCCACTGGCGACAGTGTTCCAGCCTGCGTGGCTGCCTGCACA...
34,139
OM001390.1
rhinovirus A49
Greninger,A.L., Xie,H., Cruz,K., Sereewit,J., Phung,Q., Lin,M.J.
UW Virology, DLMP
USA
2022-01-04
null
Rhinovirus A
Enterovirus
Picornaviridae
ssRNA(+)
7,056
GenBank
null
USA
USA
Homo sapiens
null
2021-07-09
SAMN24289230
PRJNA1066815
Rhinovirus A49 strain RvA49/USA/2021/SSZKC3, complete genome
CTGTTATTACGGTAACTTTGTACGCCAGTTTTATCCTCCCCTTACCCCATGCAACTTAGAAGTTTTTCATAAAGACCAATAGTTGGTAATCATCCAGATTACTTAAGGTCAAGCACTTCTGTTTCCCCGGTCAACGTTGATATGCTCCAACAGGGCAAAAACAACTGCGATCGTTATCCGCAAAGCGCCTACGCAAAGCCTAGTAGCGCCTTTGAGATTATTTGGTTGGTCGTTCCGCCATTTCCCCTGGTAGACCTGGCAGATGAGGCTGGAAGTACCCCACTGGCGACAGTGTTCCAGCCTGCGTGGCTGCCTGCACA...
34,178
OK254862.1
rhinovirus A49
Greninger,A.L., Xie,H., Cruz,K., Phung,Q., Lin,M.J.
UW Virology, DLMP
USA
2021-12-11
null
Rhinovirus A
Enterovirus
Picornaviridae
ssRNA(+)
7,047
GenBank
null
USA
USA
Homo sapiens
null
2021-06-22
SAMN21173612
PRJNA1066815
Rhinovirus A49 strain RvA49/USA/2021/JAPSEF, complete genome
CTGTTATTACGGTAACTTTGTACGCCAGTTTTATCCTCCCTTTACCCCATGCAACTTAGAAGTTTTTCATAAAGACCAATAGTTGGTAATCATCCAGATTACTTAAGGTCAAGCACTTCTGTTTCCCCGGTCAACGTTGATATGCTCCAACAGGGCAAAAACAACTGCGATCGTTATCCGCAAAGCGCCTACGCAAAGCCTAGTAGCGCCTTTGAGATTATTTGGTTGGTCGTTCCGCCATTTCCCCTGGTAGACCTGGCAGATGAGGCTGGAAGTACCCCACTGGCGACAGTGTTCCAGCCTGCGTGGCTGCCTGCACA...
35,303
OL133733.1
rhinovirus A49
Greninger,A.L., Xie,H., Cruz,K., Phung,Q., Lin,M.J.
UW Virology, DLMP
USA
2021-12-11
null
Rhinovirus A
Enterovirus
Picornaviridae
ssRNA(+)
7,056
GenBank
null
USA
USA
Homo sapiens
null
2021-07-15
SAMN22374295
PRJNA1066815
Rhinovirus A49 strain RvA49/USA/2021/BNSRGW, complete genome
CTGTTATTACGGTAACTTTGTACGCCAGTTTTATCCTCCCCTTACCCCATGCAACTTAGAAGTTTTTCATAAAGACCAATAGTTGGTAATCATCCAGATTACTTAAGGTCAAGCACTTCTGTTTCCCCGGTCAACGTTGATATGCTCCAACAGGGCAAAAACAACTGCGATCGTTATCCGCAAAGCGCCTACGCAAAGCCTAGTAGCGCCTTTGAGATTATTTGGTTGGTTGTTCCGCCATTTCCCCTGGTAGACCTGGCAGATGAGGCTGGAAGTACCCCACTGGCGACAGTGTTCCAGCCTGCGTGGCTGCCTGCACA...
35,454
OL133734.1
rhinovirus A49
Greninger,A.L., Xie,H., Cruz,K., Phung,Q., Lin,M.J.
UW Virology, DLMP
USA
2021-12-11
null
Rhinovirus A
Enterovirus
Picornaviridae
ssRNA(+)
7,056
GenBank
null
USA
USA
Homo sapiens
null
2021-07-15
SAMN22374297
PRJNA1066815
Rhinovirus A49 strain RvA49/USA/2021/C8J342, complete genome
CTGTTATTACGGTAACTTTGTACGCCAGTTTTATCCTCCCCTTACCCCATGTAACTTAGAAGTTTTTCATAAAGACCAATAGTTGGTAATCATCCAGATTACTCAAGGTCAAGCACTTCTGTTTCCCCGGTCAACGTTGATATGCTCCAACAGGGCAAAAACAACTACGATCGTTATCCGCAAAGCGCCTACGCAAAGCCTAGTAGCGCCTTTGAGATTATTTGGTTGGTCGTTCCGCCATTTCCTCTGGTAGACCTGGCAGATGAGGCTGGAAGTACCCCACTGGCGACAGTGTTCCAGCCTGCGTGGCTGCCTGCACA...
35,455
OL133741.1
rhinovirus A49
Greninger,A.L., Xie,H., Cruz,K., Phung,Q., Lin,M.J.
UW Virology, DLMP
USA
2021-12-11
null
Rhinovirus A
Enterovirus
Picornaviridae
ssRNA(+)
7,054
GenBank
null
USA
USA
Homo sapiens
null
2021-07-10
SAMN22374305
PRJNA1066815
Rhinovirus A49 strain RvA49/USA/2021/GYA9EJ, complete genome
CTGTTATTACGGTAACTTTGTACGCCAGTTTTATCCTCCCTTTACCCCATGCAACTTAGAAGTTTTTCATAAAGACCAATAGTTGGTAATCATCCAGATTACTTAAGGTCAAGCACTTCTGTTTCCCCGGTCAACGTTGATATGCTCCAACAGGGCAAAAACAACTGCGATCGTTATCCGCAAAGCGCCTACGCAAAGCCTAGTAGCGCCTTTGAGATTATTTGGTTGGTCGTTCCGCCATTTCCCCTGGTAGACCTGGCAGATGAGGCTGGAAGTACCCCACTGGCGACAGTGTTCCAGCCTGCGTGGCTGCCTGCACA...
35,462
OK017969.1
rhinovirus A49
Greninger,A.L., Xie,H., Cruz,K., Phung,Q., Lin,M.J.
UW Virology, DLMP
USA
2021-09-28
null
Rhinovirus A
Enterovirus
Picornaviridae
ssRNA(+)
7,056
GenBank
null
USA
USA
Homo sapiens
null
2021
SAMN20216755
PRJNA723895
Rhinovirus A49 strain RvA49/USA/2021/Z392UL, complete genome
CTGTTATTACGGTAACTTTGTACGCCAGTTTTATCCTCCCTTTACCCCATGCAACTTAGAAGTTTTTCATAAAGACCAATAGTTGGTAATCATCCAGATTACTTAAGGTCAAGCACTTCTGTTTCCCCGGTCAACGTTGATATGCTCCAACAGGGCAAAAACAACTGCGATCGTTATCCGCAAAGCGCCTACGCAAAGCCTAGTAGCGCCTTTGAGATTATTTGGTTGGTCGTTCCGCCATTTCCCCTGGTAGACCTGGCAGATGAGGCTGGAAGTACCCCACTGGCGACAGTGTTCCAGCCTGCGTGGCTGCCTGCACA...
37,614
OK161386.1
rhinovirus A49
Greninger,A.L., Xie,H., Cruz,K., Phung,Q., Lin,M.J.
UW Virology, DLMP
USA
2021-09-28
null
Rhinovirus A
Enterovirus
Picornaviridae
ssRNA(+)
7,025
GenBank
null
USA
USA
Homo sapiens
null
2021-06-14
SAMN20933026
PRJNA1066815
Rhinovirus A49 strain RvA49/USA/2021/GWCNZV, complete genome
GGGAGTGGTACTCTGTTATTACGGTAACTTTGTACGCCAGTTTTATCCTCCCTTTACCCCATGCAACTTAGAAGTTTTTCATAAAGACCAATAGTTGGTAATCATCCAGATTACTTAAGGTCAAGCACTTCTGTTTCCCCGGTCAACGTTGATATGCTCCAACAGGGCAAAAACAACTGCGATCGTTATCCGCAAAGCGCCTACGCAAAGCCTAGTAGCGCCTTTGAGATTATTTGGTTGGTCGTTCCGCCATTTCCCCTGGTAGACCTGGCAGATGAGGCTGGAAGTACCCCACTGGCGACAGTGTTCCAGCCTGCGTG...
37,649
OK181454.1
rhinovirus A49
Greninger,A.L., Xie,H., Cruz,K., Phung,Q., Lin,M.J.
UW Virology, DLMP
USA
2021-09-28
null
Rhinovirus A
Enterovirus
Picornaviridae
ssRNA(+)
7,056
GenBank
null
USA
USA
Homo sapiens
null
2021-06-18
SAMN20932968
PRJNA1066815
Rhinovirus A49 strain RvA49/USA/2021/5WDY9S, complete genome
CTGTTATTACGGTAACTTTGTACGCCAGTTTTATCCTCCCCTTACCCCATGCAACTTAGAAGTTTTTCATAAAGACCAATAGTTGGTAATCATCCAGATTACTTAAGGTCAAGCACTTCTGTTTCCCCGGTCAACGTTGATATGCTCCAACAGGGCAAAAACAACTGCGATCGTTATCCGCAAAGCGCCTACGCAAAGCCTAGTAGCGCCTTTGAGATTATTTGGTTGGTCGTTCCGCCATTTCCCCTGGTAGACCTGGCAGATGAGGCTGGAAGTACCCCACTGGCGACAGTGTTCCAGCCTGCGTGGCTGCCTGCACA...
37,678
MZ835608.1
rhinovirus A49
Greninger,A.L., Xie,H., Cruz,K., Phung,Q., Lin,M.J.
UW Virology, DLMP
USA
2021-09-07
null
Rhinovirus A
Enterovirus
Picornaviridae
ssRNA(+)
7,056
GenBank
null
USA
USA
Homo sapiens
null
2021-06-10
SAMN20244000
PRJNA1066815
Rhinovirus A49 strain RvA49/USA/2021/W77NDS, complete genome
CTGTTATTACGGTAACTTTGTACGCCAGTTTTATCCTCCCCTTACCCCATGCAACTTAGAAGTTTTTCATAAAGACCAATAGTTGGTAATCATCCAGATTACTTAAGGTCAAGCACTTCTGTTTCCCCGGTCAACGTTGATATGCTCCAACAGGGCAAAAACAACTGCGATCGTTATCCGCAAAGCGCCTACGCAAAGCCTAGTAGCGCCTTTGAGATTATTTGGTTGGTCGTTCCGCCATTTCCCCTGGTAGACCTGGCAGATGAGGCTGGAAGTACCCCACTGGCGACAGTGTTCCAGCCTGCGTGGCTGCCTGCACA...
38,184
MZ835612.1
rhinovirus A49
Greninger,A.L., Xie,H., Cruz,K., Phung,Q., Lin,M.J.
UW Virology, DLMP
USA
2021-09-07
null
Rhinovirus A
Enterovirus
Picornaviridae
ssRNA(+)
7,055
GenBank
null
USA
USA
Homo sapiens
null
2021-06-10
SAMN20244005
PRJNA1066815
Rhinovirus A49 strain RvA49/USA/2021/WTHQKT, complete genome
CTGTTATTACGGTAACCTTGTACGCCAGTTTTATCCTCCCCTTACCCCATGCAACTTAGAAGTTTTTCATAAAGACCAATAGTTGGTAATCATCCAGATTACTTAAGGTCAAGCACTTCTGTTTCCCCGGTCAACGTTGATATGCTCCAACAGGGCAAAAACAACTGCGATCGTTATCCGCAAAGCGCCTACGCAAAGCCTAGTAGCGCCTTTGAGATTATTTGGTTGGTCGTTCCGCCATTTCCCCTGGTAGACCTGGCAGATGAGGCTGGAAGTACCCCACTGGCGACAGTGTTCCAGCCTGCGTGGCTGCCTGCACA...
38,188
MZ629143.1
rhinovirus A49
Greninger,A.L., Xie,H., Cruz,K., Phung,Q., Lin,M.J.
UW Virology, DLMP
USA
2021-08-08
null
Rhinovirus A
Enterovirus
Picornaviridae
ssRNA(+)
7,059
GenBank
null
USA
USA
Homo sapiens
null
2021-06-01
SAMN20216635
PRJNA1066815
Rhinovirus A49 strain RvA49/USA/2021/JT49S7, complete genome
CTGTTATTACGGTAACTTTGTACGCCAGTTTTATCCTCCCCTTACCCCATGCAACTTAGAAGTTTTTCATAAAGACCAATAGTTGGTAATCATCCAGATTACTTAAGGTCAAGCACTTCTGTTTCCCCGGTCAACGTTGATATGCTCCAACAGGGCAAAAACAACTGCGATCGTTATCCGCAAAGCGCCTACGCAAAGCCTAGTAGCGCCTTTGAGATTATTTGGTTGGTCGTTCCGCCATTTCCCCTGGTAGACCTGGCAGATGAGGCTGGAAGTACCCCACTGGCGACAGTGTTCCAGCCTGCGTGGCTGCCTGCACA...
39,618
MZ268733.1
rhinovirus A49
Greninger,A.L., Xie,H., Cruz,K., Phung,Q., Lin,M.J.
UW Virology, DLMP
USA
2021-06-15
NNR8PC
Rhinovirus A
Enterovirus
Picornaviridae
ssRNA(+)
7,039
GenBank
null
USA
USA
Homo sapiens
null
2021
null
null
Rhinovirus A49 isolate NNR8PC, complete genome
ACGGTAACTTTGTACGCCAGTTTTATCCTCCCCTTACCCCATGCAACTTAGAAGTTTTTCATAAAGACCAATAGTTGGTAATCATCCAGATTACTTAAGGTCAAGCACTTCTGTTTCCCCGGTCAACGTTGATATGCTCCAACAGGGCAAAAACAACTGCGATCGTTATCCGCAAAGCGCCTACGCAAAGCCTAGTAGCGCCTTTGAGATTATTTGGTTGGTCGTTCCGCCATTTCCCCTGGTAGACCTGGCAGATGAGGCTGGAAGTACCCCACTGGCGACAGTGTTCCAGCCTGCGTGGCTGCCTGCACACCCTATGG...
41,461
MZ153248.1
rhinovirus A49
Greninger,A.L., Xie,H., Cruz,K., Phung,Q., Lin,M.J.
UW Virology, DLMP
USA
2021-05-18
R8PC55
Rhinovirus A
Enterovirus
Picornaviridae
ssRNA(+)
7,056
GenBank
null
USA
USA
Homo sapiens
null
2021-04-13
SAMN20082379
PRJNA1066815
Rhinovirus A49 strain RvA49/USA/2021/R8PC55, complete genome
CTGTTATTACGGTAACTTTGTACGCCAGTTTTATCCTCCCCTTACCCCATGCAACTTAGAAGTTTTTCATAAAGACCAATAGTTGGTAATCATCCAGATTACTTAAGGTCAAGCACTTCTGTTTCCCCGGTCAACGTTGATATGCTCCAACAGGGCAAAAACAACTGCGATCGTTATCCGCAAAGCGCCTACGCAAAGCCTAGTAGCGCCTTTGAGATTATTTGGTTGGTCGTTCCGCCATTTCCCCTGGTAGACCTGGCAGATGAGGCTGGAAGTACCCCACTGGCGACAGTGTTCCAGCCTGCGTGGCTGCCTGCACA...
41,899
LC530048.1
rhinovirus A49
Takeuchi,S., Kawada,J., Ito,Y.
Department of Pediatrics; 65 Tsurumai-cho, Showa-ku, Nagoya, Aichi 466-8550
Japan
2020-03-18
sugckmmaht NGO1
Rhinovirus A
Enterovirus
Picornaviridae
ssRNA(+)
7,025
GenBank
null
Japan
Japan
Homo sapiens
null
2019-02-27
null
null
Human rhinovirus A49 sugckmmaht NGO1 genomic RNA, complete genome
GGGAGTGGTACTCTGTTATTACGGTAACTTTGTACGCCAGTTTTATCCTCCCCTTACCCCATGTAACTTAGAAGTTTTTCATAAAGACCAATAGTTGGTAATCATCCAGATTACTTAAGGTCAAGCACTTCTGTTTCCCCGGTCAACGTTGATATGCTCCAACAGGGCAAAAACAACTGCGATCGTTATCCGCAAAGCGCCTACACAAAGCCTAGTAGCGCCTTTGAGATTATTTGGTTGGTCGTTCCGCCATTTCCCCTGGTAGACCTGGCAGATGAGGCTGGAAGTACCCCACTGGCGACAGTGTTCCAGCCTGCGTG...
53,304
KY369896.1
rhinovirus A49
Greninger,A.L., Makhsous,N., Kuypers,J.M., Shean,R.C., Jerome,K.R.
UW, Lab Medicine
USA
2017-01-15
null
Rhinovirus A
Enterovirus
Picornaviridae
ssRNA(+)
7,025
GenBank
null
USA
USA
Homo sapiens
null
2016
null
PRJNA338014
Rhinovirus A49 strain SC1066, complete genome
GGGAGTGGTACTCTGTTATTACGGTAACTTTGTACGCCAGTTTTATCCTCCCCTTACCCCATGTAACTTAGAAGTTTTTCACAAAGACCAATAGTTGGTAATCATCCAGATTACTTAAGGTCAAGCACTTCTGTTTCCCCGGTCAACGTTGATATGCCCCAACAGGGCAAAAACAACTGCGATCGTTATCCGCAAAGCGCCTACGCAAAGCTTAGTAGCACCTTTGAGATTATTTGGTTGGTCGTTCCGCCATTTCCCCTGGTAGACCTGGCAGATGAGGCTGGAAGTACCCCACTGGCGACAGTGTTCCAGCCTGCGTG...
78,650
FJ445134.1
rhinovirus A49
Palmenberg,A.C., Spiro,D., Kuzmickas,R., Wang,S., Djikeng,A., Rathe,J.A., Fraser-Liggett,C.M., Liggett,S.B., Overton,L., Tsitrin,T., Gallagher,T., Liu,J., Pushparaj,V., Tallon,L.J.
University of Maryland School of Medicine
USA
2009-02-13
F04
Rhinovirus A
Enterovirus
Picornaviridae
ssRNA(+)
7,109
GenBank
1
USA
USA
Homo sapiens
null
null
null
PRJNA32533
Human rhinovirus 49 isolate F04, complete genome
TTAAAACTGGATCTGGGTTGTTCCCACTTGGATCTCCCAAAGGGAGTGGTACTCTGTTATTACGGTAACTTTGTACGCCAGTTTTATCCTCCCCTTACCCCATGTAACTTAGAAGTTTTTCATAAAGACCAATAGTTGGTAATCATCCAGATTACTTAAGGTCAAGCACTTCTGTTTCCCCGGTCAATGTTGATATGCTCCAACAGGGCAAAAACAACTGCGATCGTTATCCGCAAAGCGCCTACGCAAAGCTTAGTAGCACCTTTGAGATTGTTTGGTTGGTCGTTCCGCCATTTCCCCTGGTAGACCTGGCAGATGAG...
103,702
DQ473496.1
rhinovirus A49
Kistler,A.L., Webster,D.R., Rouskin,S., Magrini,V., Credle,J.J., Schnurr,D.P., Boushey,H.A., Mardis,E.R., Li,H., DeRisi,J.L., Webster,D., Reich,S., Credle,J., Schnurr,D., Boushey,H., Mardis,E., Ganem,D., DeRisi,J.
University of California, San Francisco, Biochemistry and Biophysics
USA
2007-05-07
null
Rhinovirus A
Enterovirus
Picornaviridae
ssRNA(+)
7,106
GenBank
1
USA
USA
null
null
null
null
null
Rhinovirus A49, complete genome
TTAAAACTGGATCCAGGTTGTTCCCACCTGGATCTCCCAAAGGGAGTGGAACTCTGTTATTACGGTAACTTTGTACGCCAGTTTTATCCTCCCCCACCCCATGTAACTTAGAAGCTTTTCACAAAGACCAATAGTTGGTAATCATCCAGATTACTTAAGGTCAAGCACTTCTGTTTCCCCGGTCAACGTTGATATGCTCTAACAGGGCAAAAACAACTGCGATCGTTATCCGCAAAGCGCCTACGCAAAGCCTAGTAACACCTTTGAAATTGTTTGGTTGGTCGTTCCGCCATTTTCCCTGGTAGACCTGGCAGATGAGG...
107,189
LC699416.1
rhinovirus A54
Egawa,K., Kakizaki,M., Kume,Y., Suwa,R., Kawase,M., Ono,T., Chishiki,M., Okabe,H., Norito,S., Sato,M., Sakuma,H., Suzuki,S., Hosoya,M., Takeda,M., Hashimoto,K., Shirato,K.
Department of Virology III; 4-7-1 Gakuen, Musashimurayama, Tokyo 208-0011
Japan
2022-03-23
HRV_A54_Fukushima_H504_2019
Rhinovirus A
Enterovirus
Picornaviridae
ssRNA(+)
7,122
GenBank
1
Japan: Fukushima
Japan
Homo sapiens
null
2019
SAMD00490726
PRJDB13572
Rhinovirus A54 HRV_A54_Fukushima_H504_2019 genomic RNA, complete genome
TCCCACCTGGATCTCCTACGTGGAGTTGTACTCTATTATTCCGGTAATTTTGTACGCCAGTTTTATACTCCCACCCCCATGTAACTTAGAAGTTGAACACAACGACCAATAGGAGGCAATTAACCAAATTGCTAAAGGTCAAGCACTTCTGTTTCCCCGGTCAAGATTGATACGCTCCACCAGGGCGAAAACAGTTGAGATCGTTATCCGCAAAGTGCCTACGCGAAGCCTAGTAACATTTTGGAGAGTTTATGGTTGGTCGCTCTGCTATTCCCCATAGTAGACCTGGCAGATGAGGCTAGAAGCTCCCCACTGGCGAC...
32,235
OL961530.1
rhinovirus A54
Greninger,A.L., Xie,H., Cruz,K., Sereewit,J., Phung,Q., Lin,M.J.
UW Virology, DLMP
USA
2022-01-04
null
Rhinovirus A
Enterovirus
Picornaviridae
ssRNA(+)
7,133
GenBank
null
USA
USA
Homo sapiens
null
2021
SAMN23789518
PRJNA723895
Rhinovirus A54 strain RvA54/USA/2021/K6S7UL, complete genome
TTAAAACTGGGTCTAGGTTGTTCCCACCTAGATCTCCTACATGGAGTTGTACTCTATTATTCCGGTAATTTTGTACGCCAGTTTTATATCCCTTTCCCCATGTAACTTAGAAGTTTGACACAATGACCAATAGGCGGCAATTAACCAAATTGCTAAAGGTCAAGCACTTCTGTTTCCCCGGTCAAGATTGATACGCTCTACCAGGGCGAAAACAGTTGAGATCGTTATCCGCAAAGTGCCTACGCGAAGCTTAGTAACATCTTGAAGAATTTATGACTGGTCGCTCCGCCATTACCCATGGTAGACCTGGCAGATGAGGC...
34,111
OK539505.1
rhinovirus A54
Greninger,A.L., Xie,H., Cruz,K., Phung,Q., Lin,M.J.
UW Virology, DLMP
USA
2021-12-11
null
Rhinovirus A
Enterovirus
Picornaviridae
ssRNA(+)
7,133
GenBank
null
USA
USA
Homo sapiens
null
2021-07-14
SAMN22069262
PRJNA1066815
Rhinovirus A54 strain RvA54/USA/2021/SLPWR2, complete genome
TTAAAACTGGGTCCAGGTTGTTCCCACCTGGATCTCCTACGTGGAGTTGTACTCTATTATTACGGTAATTTTGTACGCCAGTTTTATATCCCCACCCCCATGTAACTTAGAAGTTGAACACAACGACCAATAGGAGGCAATTAACCAAATTGCTAAAGGTCAAGCACTTCTGTTTCCCCGGTCAAGATTGATACGCTCCACCAGGGCGAAAACAATTGAGATCGTTATCCGCAAAGTGCCTACGCGAAGCCTAGTAACATTTTGAAGAGTTTATGGTTGGTCGCTCCGCTATTCCCCATAGTAGACCTGGCAGATGAGGC...
35,369
MZ540950.1
rhinovirus A54
Greninger,A.L., Xie,H., Cruz,K., Phung,Q., Lin,M.J.
UW Virology, DLMP
USA
2021-08-08
null
Rhinovirus A
Enterovirus
Picornaviridae
ssRNA(+)
7,118
GenBank
null
USA
USA
Homo sapiens
null
2021-05-12
SAMN19819190
PRJNA1066815
Rhinovirus A54 strain RvA54/USA/2021/W58KP8, complete genome
AAACTGGGTCTAGGTTGTTCCCACCTAGATCTCCTACATGGAGTTGTACTCTATTATTCCGGTAATTTTGTACGCCAGTTTTATATCCCTTTCCCCATGTAACTTAGAAGTTTGACACAATGACCAATAGGCGGCAATTAACCAAATTGCTAAAGGTCAAGCACTTCTGTTTCCCCGGTCAAGATTGATACGCTCTACCAGGGCGAAAACAGTTGAGATCGTTATCCGCAAAGTGCCTACGCGAAGCTTAGTAACATCTTGAAGAATTTATGACTGGTCGCTCCGCCATTACCCATGGTAGACCTGGCAGATGAGGCTAG...
39,575
MN369035.1
rhinovirus A54
Lin,M.J., Tait,A., Greninger,A.L.
UW Virology, Laboratory Medicine
USA
2019-09-16
null
Rhinovirus A
Enterovirus
Picornaviridae
ssRNA(+)
6,614
GenBank
null
USA
USA
Homo sapiens
null
2018
null
PRJNA338014
Rhinovirus A54 strain SC9916, complete genome
GGCTAGTCGTAATGAGCAATTACGGGATGGGACCAACTACTTTGGGTGTCCGTGTTTCACTTTTTCCTTTTATATTTGCTTATGGTGACAATATATAGACTATATATTGGCACCATGGGCGCTCAGGTATCTAGGCAGAATGTTGGTACTCACTCAACCCAAAACTCAGTGTCAAATGGATCCAGCTTGAATTATTTTAATATAAACTATTTTAAGGATGCTGCTTCAAGTGGAGCATCAAAATTGGAATTCTCACAAGACCCAAGTAAGTTTACTGACCCAGTAAAAGATGTTTTGGAGAAAGGGATACCAACTTTACA...
59,492
KY369875.1
rhinovirus A54
Greninger,A.L., Makhsous,N., Kuypers,J.M., Shean,R.C., Jerome,K.R.
UW, Lab Medicine
USA
2017-01-15
null
Rhinovirus A
Enterovirus
Picornaviridae
ssRNA(+)
7,104
GenBank
null
USA
USA
Homo sapiens
null
2016
SAMN28125221
PRJNA338014
Rhinovirus A54 strain SC176, complete genome
TTAAAACTGGGTCTAGGTTGTTCCCACCTAGATCTCCTACACGGAGTTGTACTCTATTATTCCGGTAATTTTGTACGCCAGTTTTAWATCCCTTCCCCCACGTAACTTAGAAGTTTGACACACTGACCAATAGGCGGCAATTAACCAAATTGCTAAAGGTCAAGCACTTCTGTCTCCCCGGTCAAGATTGATACGCTCTACCAGGGCGAAAACAGTCGAGATCGTTATCCGCAAAGTGCCTACGCGAAGCTTAGTAACATCTTGAAGAATTTATGACTGGTCGCTCCGCCATTACCCATGGTAGACCTGGCAGATGAGGC...
78,629
FJ445138.1
rhinovirus A54
Palmenberg,A.C., Spiro,D., Kuzmickas,R., Wang,S., Djikeng,A., Rathe,J.A., Fraser-Liggett,C.M., Liggett,S.B., Overton,L., Tsitrin,T., Gallagher,T., Liu,J., Pushparaj,V., Tallon,L.J.
University of Maryland School of Medicine
USA
2009-02-13
null
Rhinovirus A
Enterovirus
Picornaviridae
ssRNA(+)
7,134
GenBank
1
null
null
null
null
null
null
PRJNA32533
Human rhinovirus 54 strain ATCC VR-1164, complete genome
TTAAAACTGGGTCTAGGTTGTTCCCACCTAGACCTCCTACATGGAGTTGTACTCTATTATTTCGGTAATTTTGTACGCCAGTTTTATATCCCCTTTCCCCACGTAACTTAGAAGTTTAACACACTGACCAATAGGTGGCAATTAACCAAATTGCTAAAGGTCAAGCACTTCTGTTTCCCCGGTCAAGATTGATACGCTCTACCAGGGCGAAAACAATTGAGATCGTTAMCCGCAAAGTGCCTACGCGAAGCCTAGTAACATCTTGAAGAATTTATGGTTGGTCGCTCCACTATTCCCCATAGTAGACCTGGCAGATGAGG...
103,706
FJ445139.1
rhinovirus A54
Palmenberg,A.C., Spiro,D., Kuzmickas,R., Wang,S., Djikeng,A., Rathe,J.A., Fraser-Liggett,C.M., Liggett,S.B., Overton,L., Tsitrin,T., Gallagher,T., Liu,J., Pushparaj,V., Tallon,L.J.
University of Maryland School of Medicine
USA
2009-02-13
F05
Rhinovirus A
Enterovirus
Picornaviridae
ssRNA(+)
7,133
GenBank
1
USA
USA
Homo sapiens
null
null
null
PRJNA32533
Human rhinovirus 54 isolate F05, complete genome
TTAAAACTGGATCTAGGTTGTTCCCACCTAGATCTCCTACATGGAGTTGTACTCTATTATTCCGGTAATTTTGTACGCCAGTTTTATATCCCTACCCCCATGTAACTTAGAAGTTAAGCACAACGACCAATAGGAGGCAATTGACCAAATTGCTAAAGGTCAAGCACTTCTGTTTCCCCGGTCAAGATTGATACGCTCCACCAGGGCGAAAACAATTGAGATCGTTATCCGCAAAGTGCCTACGCGAAGCCTAGTAACACTTTGAAGAGTTTATGGTTGGTCGCTCCGCTATTCCCCATAGCAGACCTGGCAGATGAGGC...
103,707
LC699420.1
rhinovirus A58
Egawa,K., Kakizaki,M., Kume,Y., Suwa,R., Kawase,M., Ono,T., Chishiki,M., Okabe,H., Norito,S., Sato,M., Sakuma,H., Suzuki,S., Hosoya,M., Takeda,M., Hashimoto,K., Shirato,K.
Department of Virology III; 4-7-1 Gakuen, Musashimurayama, Tokyo 208-0011
Japan
2022-03-23
HRV_A58_Fukushima_H681_2019
Rhinovirus A
Enterovirus
Picornaviridae
ssRNA(+)
7,143
GenBank
1
Japan: Fukushima
Japan
Homo sapiens
null
2019
SAMD00490730
PRJDB13572
Rhinovirus A58 HRV_A58_Fukushima_H681_2019 genomic RNA, complete genome
TTAAAACTGGGAGTGGGTTGTTCCCACCTACTCCACCCACGTGGTGTTGTACACTGTTATTACGGTAACTTTGTATGCCAGTTTTTACCACCCTTCCCCGTAACGTAAATTAGAAGTTTGTACACTCAGACCAATAGGTGATAATTATCCAGATTATCAACGGTCAAGCACTTCTGTTTCCCCGGTCAATGAGGATATGCTTTACCCAAGGCAAAAACCTTAAAGATCGTTATCCCCGCATTGCCTACACAGAGCCTAGTATCACTTTTGATGTATTTAGACTGGTCGCTCCCTGCAATCCCAGCAGTAGACCTGGCAGA...
32,239
OL638449.1
rhinovirus A58
Greninger,A.L., Xie,H., Cruz,K., Phung,Q., Lin,M.J.
UW Virology, DLMP
USA
2022-01-04
QTAXQT
Rhinovirus A
Enterovirus
Picornaviridae
ssRNA(+)
7,094
GenBank
null
USA
USA
Homo sapiens
null
2021-06-14
SAMN23213192
PRJNA1066815
Rhinovirus A58 strain RvA58/USA/2021/QTAXQT, complete genome
TGTTGTACACTGTTATTACGGTAACTTTGTATGCCAGTTTTTACCACCCTTCCCCGTAACGTAAATTAGAAGTTTGTACATTCAGACCAATAGGTGATAATTATCCAGATTATCAACGGTCAAGCACTTCTGTTTCCCCGGTCGATGAGGATATGCTTTACCCAAGGCAAAAACCTTAAAGATCGTTATCCCCGCATTGCCTACACAGAGCCTAGTATCACTTTTGATGTACTTAGACTGGTCGCTCCCTGCAATCCCAGCAGTAGACCTGGCAGATGAGGCTGGACGTTCCCCACTGGCGACAGTGGTCCAGCCTGCGT...
34,081
OL961521.1
rhinovirus A58
Greninger,A.L., Xie,H., Cruz,K., Sereewit,J., Phung,Q., Lin,M.J.
UW Virology, DLMP
USA
2022-01-04
null
Rhinovirus A
Enterovirus
Picornaviridae
ssRNA(+)
7,094
GenBank
null
USA
USA
Homo sapiens
null
2021
SAMN23789508
PRJNA723895
Rhinovirus A58 strain RvA58/USA/2021/7SWEF2, complete genome
TGTTGTACACTGTTATTACGGTAACTTTGTATGCCAGTTTTTACCACCCTTCCCCGTAACGTAAATTAGAAGTTTGTACATTCAGACCAATAGGTGATAATTATCCAGATTATCAACGGTCAAGCACTTCTGTTTCCCCGGTCGACGAGGATATGCTTTACCCAAGGCAAAAACCTTAAAGATCGTTATCCCCGCATTGCCTACACAGAGCCTAGTATCACTTTTGATGTACTTAGACTGGTCGCTCCCTGCAATCCCAGCAGTAGACCTGGCAGATGAGGCTGGACGTTCCCCACTGGCGACAGTGGTCCAGCCTGCGT...
34,102
OM001348.1
rhinovirus A58
Greninger,A.L., Xie,H., Cruz,K., Sereewit,J., Phung,Q., Lin,M.J.
UW Virology, DLMP
USA
2022-01-04
null
Rhinovirus A
Enterovirus
Picornaviridae
ssRNA(+)
7,072
GenBank
null
USA
USA
Homo sapiens
null
2021-06-22
SAMN24288764
PRJNA1066815
Rhinovirus A58 strain RvA58/USA/2021/B4AML4, complete genome
TGTTGTACACTGTTATTACGGTAACTTTGTATGCCAGTTTTTACCACCCTTCCCCGTAACGTAAATTAGAAGTTTGTACACTCGGACCAATAGGTGATAATTATCCAGATTATCAACGGTCAAGCACTTCTGTTCCCCCGGTCAATGAGGATATGCTTTACCCAAGGCAAAAACCTTAAAGATCGTTATCCCCGCATTGCCTACACAGAGCCTAGTATCACTTTTGATGTATTTAGACTGGTCGCTCCCTGCAATCCCAGCAGTAGACCTGGCAGATGAGGCTGGACGTTCCCCACTGGCGACAGTGGTCCAGCCTGCGT...
34,136
OK017916.1
rhinovirus A58
Greninger,A.L., Xie,H., Cruz,K., Phung,Q., Lin,M.J.
UW Virology, DLMP
USA
2021-09-28
null
Rhinovirus A
Enterovirus
Picornaviridae
ssRNA(+)
7,094
GenBank
null
USA
USA
Homo sapiens
null
2021-05-27
SAMN20216551
PRJNA1066815
Rhinovirus A58 strain RvA58/USA/2021/56XQM8, complete genome
TGTTGTACACTGTTATTACGGTAACTTTGTATGCCAGTTTTTACCACCCTTCCCCGTAACGTAAATTAGAAGTTTGTACATTCAGACCAATAGGTGATAATTATCCAGATTATCAACGGTCAAGCACTTCTGTTTCCCCGGTCGACGAGGATATGCTTTACCCAAGGCAAAAACCTTAAAGATCGTTATCCCCGCATTGCCTACACAGAGCCTAGTATCACTTTTGATGTACTTAGACTGGTCGCTCCCTGCAATCCCAGCAGTAGACCTGGCAGATGAGGCTGGACGTTCCCCACTGGCGACAGTGGTCCAGCCTGCGT...
37,561
OK017922.1
rhinovirus A58
Greninger,A.L., Xie,H., Cruz,K., Phung,Q., Lin,M.J.
UW Virology, DLMP
USA
2021-09-28
null
Rhinovirus A
Enterovirus
Picornaviridae
ssRNA(+)
7,080
GenBank
null
USA
USA
Homo sapiens
null
2021
SAMN20216591
PRJNA723895
Rhinovirus A58 strain RvA58/USA/2021/B6GY49, complete genome
TGTACACTGTTATTACGGTAACTTTGTATGCCAGTTTTTACCACCCTTCCCCGTAACGTAAATTAGAAGTTTGTACATTCAGACCAATAGGTGATAATTATCCAGATTATCAACGGTCAAGCACTTCTGTTTCCCCGGTCGACGAGGATATGCTTTACCCAAGGCAAAAACCTTAAAGATCGTTATCCCCGCATTGCCTACACAGAGCCTAGTATCACTTTTGATGTACTTAGACTGGTCGCTCCCTGCAATCCCAGCAGTAGACCTGGCAGATGAGGCTGGACGTTCCCCACTGGCGACAGTGGTCCAGCCTGCGTGGC...
37,567
OK017950.1
rhinovirus A58
Greninger,A.L., Xie,H., Cruz,K., Phung,Q., Lin,M.J.
UW Virology, DLMP
USA
2021-09-28
null
Rhinovirus A
Enterovirus
Picornaviridae
ssRNA(+)
7,090
GenBank
null
USA
USA
Homo sapiens
null
2021-05-27
SAMN20216676
PRJNA1066815
Rhinovirus A58 strain RvA58/USA/2021/Q9RUYV, complete genome
GTACACTGTTATTACGGTAACTTTGTATGCCAGTTTTTATCACCCTTCCCCGTAACGTAAATTAGAAGTTTGTACATTCAGACCAATAGGTGATAATTATCCAGATTATCAACGGTCAAGCACTTCTGTTTCCCCGGTCGATGAGGATATGCTTTACCCAAGGCAAAAACCTTAAAGATCGTTATCCCCGCATTGCCTACACAGAGCCTAGTATCACTTTTGATGTATTTAGGCTGGTCGCTCCCTGCAACCCCAGCAGTAGACCTGGCAGATGAGGCTGGACGTTCCCCACTGGCGACAGTGGTCCAGCCTGCGTGGCT...
37,595
MZ670593.1
rhinovirus A58
Greninger,A.L., Xie,H., Cruz,K., Phung,Q., Lin,M.J.
UW Virology, DLMP
USA
2021-09-07
null
Rhinovirus A
Enterovirus
Picornaviridae
ssRNA(+)
7,084
GenBank
null
USA
USA
Homo sapiens
null
2021-06-09
SAMN20216704
PRJNA1066815
Rhinovirus A58 strain RvA58/USA/2021/T28K2D, complete genome
GTACACTGTTATTACGGTAACTTTGTATGCCAGTTTTTATCACCCTTCCCCGTAACGTAAATTAGAAGTTTGTACATTCAGACCAATAGGTGATAATTATCCAGATTATCAACGGTCAAGCACTTCTGTTTCCCCGGTCGATGAGGATATGCTTTACCCAAGGCAAAAACCTTAAAGATCGTTATCCCCGCATTGCCTACACAGAGCCTAGTATCACTTTTGATGTATTTAGGCTGGTCGCTCCCTGCAACCCCAGCAGTAGACCTGGCAGATGAGGCTGGACGTTCCCCACTGGCGACAGTGGTCCAGCCTGCGTGGCT...
38,130
FJ445142.1
rhinovirus A58
Palmenberg,A.C., Spiro,D., Kuzmickas,R., Wang,S., Djikeng,A., Rathe,J.A., Fraser-Liggett,C.M., Liggett,S.B., Overton,L., Tsitrin,T., Gallagher,T., Liu,J., Pushparaj,V., Tallon,L.J.
University of Maryland School of Medicine
USA
2009-02-13
null
Rhinovirus A
Enterovirus
Picornaviridae
ssRNA(+)
7,140
GenBank
1
null
null
null
null
null
null
PRJNA32533
Human rhinovirus 58 strain ATCC VR-1168, complete genome
TTAAAACTGGGAGTAGGTTGTTCCCACCTACTCTACCCACGTGGTGTTGTACACTGTTATCACGGTAACTTTGTATGCCAGTTTTGCCACCCTTCCCCGTAGCGTAACTTAGAAGTTTGTACACTTAGACCAATAGGCGATAATCATCCAGATTATCAAAGGTCAAGCACTTCTGTTTCCCCGGTCAATGAGGATATGCTTTTCCCAAGGCAAAAACCTTAGAGATCGTTATCCCCACATTGCCTACACAGAGCCTAGTATCACCTTTGATGTATTTAGACTGGTCGCTCCCTGCAAACCCAGCAGTAGACCTGGCAGAT...
103,710
ON729338.1
rhinovirus A59
Sereewit,J., Xie,H., Greninger,A.
UW Virology, Laboratory Medicine
null
2022-07-20
null
Rhinovirus A
Enterovirus
Picornaviridae
ssRNA(+)
7,079
GenBank
null
USA
USA
Homo sapiens
null
2017
SAMN28886787
PRJNA338014
Rhinovirus A59 strain SC1090, complete genome
CCACTTGGGAGATCCAGGTGGAGTGGTACACTATTATCCCGGTAATTTTGTACGCCAGTTTTATAACCCCTCCCCCCTTGTAACTTAGAAGATGTAAACACAGACCAATAGGTGGTAACTAACCAAGTTACTAAAGGTCAAGCACTTCTGTTTCCCCGGCTGATATTGATATGCTCCACCAGGGCAAAAACAATAGAAGTCGTTACCCACAAAGTGCCTACGCAAAGCCTAGTAGCACTTTAGATTGTGTATGGTTGGTCGCTCAGCTATTCCCCCTAGTAGACCTGGCAGATGAGGCTAGAAATACCCCACTGGTAACA...
27,945
OL638425.1
rhinovirus A59
Greninger,A.L., Xie,H., Cruz,K., Phung,Q., Lin,M.J.
UW Virology, DLMP
USA
2022-01-04
C69TDF
Rhinovirus A
Enterovirus
Picornaviridae
ssRNA(+)
7,017
GenBank
null
USA
USA
Homo sapiens
null
2021-07-10
SAMN23213158
PRJNA1066815
Rhinovirus A59 strain RvA59/USA/2021/C69TDF, complete genome
TTGTAACTTAGAAGATGTAAACACAGACCAATAGGTGGTAACTAACCAAGTTACTAAAGGTCAAGCACTTCTGTTTCCCCGGCTGACATTGATATGCTCCACCAGGGCAAAAACAATAGAAGTCGTTATCCGCAAAGTGCCTACGCAAAGCCTAGTAGCACTTTAGATTGTATATGGTTGGTCGCTCAGCTATTCCCCCTAGTAGACCTGGCAGATGAGGCTAGAAATACCCCACTGGCGACAGTGTTCTAGCCTGCGTGGCTGCCTGCGCACCCTTTCGGGTGCGAAGCCATATACATGACAAGGTGTGAAGAGCCCCG...
34,057
KY629935.1
rhinovirus A59
Greninger,A.L., Makhsous,N., Kuypers,J., Shean,R.C., Jerome,K.R., Kuypers,J.M.
UW, Lab Medicine
USA
2017-04-29
null
Rhinovirus A
Enterovirus
Picornaviridae
ssRNA(+)
7,130
GenBank
null
USA
USA
Homo sapiens
null
2016
null
PRJNA338014
Rhinovirus A59 strain 16-J2, complete genome
TTAAAACTGGATCCAGGTTGTTCCCACCTGGATCTCCCAAGTGGAGTGGTACACTATTATCCCGGTAATTTTGTACGCCAGTTTTATAACCCCTCCCCCCCTTGTAACTTAGAAGATGTAAACACAGACCAATAGGTGGTAACTAACCAAGTTACTAAAGGTCAAGCACTTCTGTTTCCCCGGCTGATATTGATATGCTCCACCAGGGCAAAAACAATAGAAGTCGTTATCCGCAAAGTGCCTACGCAAAGCCTAGTAGCACTTTAGATTGTGTATGGTTGGTCGCTCAGCTATTCCCCCTAGTAGACCTGGCAGATGAG...
76,852
KY369893.1
rhinovirus A59
Greninger,A.L., Makhsous,N., Kuypers,J.M., Shean,R.C., Jerome,K.R.
UW, Lab Medicine
USA
2017-01-15
null
Rhinovirus A
Enterovirus
Picornaviridae
ssRNA(+)
7,074
GenBank
null
USA
USA
Homo sapiens
null
2016
null
PRJNA338014
Rhinovirus A59 strain SC1095, complete genome
GGAGTGGTACACTATTATCCCGGTAATTTTGTACGCCAGTTTTATAACCCCTCCCCCTTGTAACTTAGAAGATGTAAACACAGACCAATAGGTGGTAACTAACCAAGTTACTAAAGGTCAAGCACTTCTGTTTCCCCGGCTGATATTGATATGCTCCACCAGGGCAAAAACAATAGAAGTCGTTATCCGCAAAGTGCCTACGCAAAGCCTAGTAGCACTTTAGATTGTGTATGGTTGGTCGCTCAGCTATTCCCCCTAGTAGACCTGGCAGATGAGGCTAGAAATACCCCACTGGTAACAGTGTTCTAGCCTGCGTGGCT...
78,647
KY369895.1
rhinovirus A59
Greninger,A.L., Makhsous,N., Kuypers,J.M., Shean,R.C., Jerome,K.R.
UW, Lab Medicine
USA
2017-01-15
null
Rhinovirus A
Enterovirus
Picornaviridae
ssRNA(+)
6,972
GenBank
null
USA
USA
Homo sapiens
null
2016
SAMN07309834
PRJNA338014
Rhinovirus A59 strain SC1038, complete genome
GAGTGGTACACTATTATCCCGGTAATTTTGTACGCCAGTTTTATAACCCCTCCCCCCTTGTAACTTAGAAGATGTAAACACAGACCAATAGGTGGTAACTAACCAAGTTACTAAAGGTCAAGCACTTCTGTTTCCCCGGCTGATATTGATATGCTCCACCAGGGCAAAAACAATAGAAGTCGTTATCCGCAAAGTGCCTACGCAAAGCCTAGTAGCACTTTAGATTGTGTATGGTTGGTCGCTCAGCTATTCCCCCTAGTAGACCTGGCAGATGAGGCTAGAAATACCCCACTGGTAACAGTGTTCTAGCCTGCGTGGCT...
78,649
DQ473500.1
rhinovirus A59
Kistler,A.L., Webster,D.R., Rouskin,S., Magrini,V., Credle,J.J., Schnurr,D.P., Boushey,H.A., Mardis,E.R., Li,H., DeRisi,J.L., Webster,D., Reich,S., Credle,J., Schnurr,D., Boushey,H., Mardis,E., Ganem,D., DeRisi,J.
University of California, San Francisco, Biochemistry and Biophysics
USA
2007-05-07
null
Rhinovirus A
Enterovirus
Picornaviridae
ssRNA(+)
7,135
GenBank
1
USA
USA
null
null
null
null
null
Rhinovirus A59, complete genome
TTAATACTGGATCCAGGTTGTTCCCACCTGGATCTCCCAAGCGGAGTGGTACACTATTATCCCGGTAATTTTGTACGCCAGTTTTATAACCCCTCCCCTTTGTAACTTAGAAGATGTAAACACAGACCAATAGGTGGTAACTAACCAAGTTACTAAAGGTCAAGCACTTCTGTTTCCCCGGCTGATATTGATATGCTCCACCAGGGCAAAAACAATAGAAGTCGTTATCCGCAAAGTGCCTACGCAAAGCCTAGTAACACTTTGAATTGTTTATGGTTGGTCGCTCAGCTATTCCCCCTAGTAGACCTGGCAGATGAGGC...
107,193
ON729329.1
rhinovirus A60
Sereewit,J., Xie,H., Greninger,A.
UW Virology, Laboratory Medicine
null
2022-07-20
null
Rhinovirus A
Enterovirus
Picornaviridae
ssRNA(+)
7,076
GenBank
null
USA
USA
Homo sapiens
null
2017
SAMN28886802
PRJNA338014
Rhinovirus A60 strain SC42, complete genome
GAGTAGTACACTATTATTACGGTAATCTTGTACGCCAGTTTTATATCCCCTTCCCCTTTTGTAACTTAGAAGTTGAACAAAGTGACCAATAGGCGGCAATCACCCAGATTGTCAAAGGTCAAGCACTTCTGTTTCCCCGGTCGAAGCTGATATGCTCCAACAGGGCAAAAACAGCCGAGATCGTTATCCGCAAAGTGCCTACGCAAAGCCTAGTAACATTTTCGAAGTTATATGGTTGGTCGCTCAGCCAAACCCCATGGTAGACCTGGCAGATGAGGCTAGAAATACCCCACTGGTGACAGTGTTCTAGCCTGCGTGGC...
27,939
LC699422.1
rhinovirus A60
Egawa,K., Kakizaki,M., Kume,Y., Suwa,R., Kawase,M., Ono,T., Chishiki,M., Okabe,H., Norito,S., Sato,M., Sakuma,H., Suzuki,S., Hosoya,M., Takeda,M., Hashimoto,K., Shirato,K.
Department of Virology III; 4-7-1 Gakuen, Musashimurayama, Tokyo 208-0011
Japan
2022-03-23
HRV_A60_Fukushima_OR4-2_2020
Rhinovirus A
Enterovirus
Picornaviridae
ssRNA(+)
7,142
GenBank
1
Japan: Fukushima
Japan
Homo sapiens
null
2020
SAMD00490732
PRJDB13572
Rhinovirus A60 HRV_A60_Fukushima_OR4-2_2020 genomic RNA, complete genome
GGATCCAGGTTGTTCCCACCTGGATCTCCTAATGGGAGTAGTACACTATTATTACGGTAATCTTGTACGCCAGTTTTATATCCCCTTCCCCTTTTGTAACTTAGAAGTTGAACAAAGTGACCAATAGGCGGCAATCACCCAGATTGTCAAAGGTCAAGCACTTCTGTTTCCCCGGTCGAAGCTGATATGCTCCAACAGGGCAAAAACAGCTGAGATCGTTATCCGCAAAGTGCCTACGCAAAGCCTAGTAACATTTTCGAAGTTATATGGTTGGTCGCTCAGCCAAACCCCATGGTAGACCTGGCAGATGAGGCTAGAAA...
32,241
OM001349.1
rhinovirus A60
Greninger,A.L., Xie,H., Cruz,K., Sereewit,J., Phung,Q., Lin,M.J.
UW Virology, DLMP
USA
2022-01-04
null
Rhinovirus A
Enterovirus
Picornaviridae
ssRNA(+)
7,022
GenBank
null
USA
USA
Homo sapiens
null
2021-06-22
SAMN24288765
PRJNA1066815
Rhinovirus A60 strain RvA60/USA/2021/F7HHAW, complete genome
AAAGTGACCAATAGGCGGCAATCACCCAGATTGTCAAAGGTCAAGCACTCCTGTTTCCCCGGTCGAAGCTGATATGCTCCAACAGGGCAAAAACAGCCGAGATCGTTATCCGCAAAGTGCCTACGCAAAGCCTAGTAACATTTTTGAAGTTATATGGTTGGTCGCTCAGCCAAACCCCATGGTAGACCTGGCAGATGAGGCTAGAAATACCCCACTGGTAACAGTGTTCTAGCCTGCGTGGCTGCCTGCACACCCTCTGGGTGTGAAGCCATATAATAGACAAGGTGTGAAGAGCCCCGTGTGCTCACTTTGAGTCCTCC...
34,137
OL133750.1
rhinovirus A60
Greninger,A.L., Xie,H., Cruz,K., Phung,Q., Lin,M.J.
UW Virology, DLMP
USA
2021-12-11
P6RQRD
Rhinovirus A
Enterovirus
Picornaviridae
ssRNA(+)
7,004
GenBank
null
USA
USA
Homo sapiens
null
2021-06-21
SAMN22374316
PRJNA1066815
Rhinovirus A60 strain RvA60/USA/2021/P6RQRD, complete genome
AAAACGACCAATAGGCGGCAATCACCCAGGTTGTCAAAGGTCAAGCACTTCTGTTTCCCCGGTCAAGGTTGATATGCTCCAACAGGGCAAAAACAGCCAAGATCGTTATCCGCAAAGTGCCTACGCAAAGCCTAGTAACATCTTCGAAGTTATATGGTTGGTCGTTCAGCCAAACCCCATGGTAGACCTGGCAGATGAGGCTAGAAATACCCCACTGGCGACAGTGTTCTAGCCTGCGTGGCTGCCTGCACACCCTCTGGGTGTGAAGCCATATAATAGACAAGGTGTGAAGAGCCTCGTGTGCTCACTTTGAGTCCTCC...
35,470
OK181468.1
rhinovirus A60
Greninger,A.L., Xie,H., Cruz,K., Phung,Q., Lin,M.J.
UW Virology, DLMP
USA
2021-09-28
null
Rhinovirus A
Enterovirus
Picornaviridae
ssRNA(+)
7,004
GenBank
null
USA
USA
Homo sapiens
null
2021-06-21
SAMN20933001
PRJNA1066815
Rhinovirus A60 strain RvA60/USA/2021/AHYZTF, complete genome
AAAACGACCAATAGGCGGCAATCACCCAGGTTGTCAAAGGTCAAGCACTTCTGTTTCCCCGGTCAAGGTTGATATGCTCCAACAGGGCAAAAACAGCCAAGATCGTTATCCGCAAAGTGCCTACGCAAAGCCTAGTAACATCTTCGAAGTTATATGGTTGGTCGTTCAGCCAAACCCCATGGTAGACCTGGCAGATGAGGCTAGAAATACCCCACTGGCGACAGTGTTCTAGCCTGCGTGGCTGCCTGCACACCCTCTGGGTGTGAAGCCATATAATAGACAAGGTGTGAAGAGCCTCGTGTGCTCACTTTGAGTCCTCC...
37,691
MZ268715.1
rhinovirus A60
Greninger,A.L., Xie,H., Cruz,K., Phung,Q., Lin,M.J.
UW Virology, DLMP
USA
2021-06-15
398799
Rhinovirus A
Enterovirus
Picornaviridae
ssRNA(+)
7,012
GenBank
null
USA
USA
Homo sapiens
null
2021-04-20
SAMN19131254
PRJNA1066815
Rhinovirus A60 strain RvA60/USA/2021/398799, complete genome
AAAACGACCAATAGGCGGCAATCACCCAGGTTGTCAAAGGTCAAGCACTTCTGTTTCCCCGGTCAAGGTTGATATGCTCCAACAGGGCAAAAACAGCCAAGATCGTTATCCGCAAAGTGCCTACGCAAAGCCTAGTAACATCTTCGAAGTTATATGGTTGGTCGTTCAGCCAAACCCCATGGTAGACCTGGCAGATGAGGCTAGAAATACCCCACTGGCGACAGTGTTCTAGCCTGCGTGGCTGCCTGCACACCCTCTGGGTGTGAAGCCATATAATAGACAAGGTGTGAAGAGCCCCGTGTGCTCACTTTGAGTCCTCC...
41,443
FJ445143.1
rhinovirus A60
Palmenberg,A.C., Spiro,D., Kuzmickas,R., Wang,S., Djikeng,A., Rathe,J.A., Fraser-Liggett,C.M., Liggett,S.B., Overton,L., Tsitrin,T., Gallagher,T., Liu,J., Pushparaj,V., Tallon,L.J.
University of Maryland School of Medicine
USA
2009-02-13
null
Rhinovirus A
Enterovirus
Picornaviridae
ssRNA(+)
7,139
GenBank
1
null
null
null
null
null
null
PRJNA32533
Human rhinovirus 60 strain ATCC VR-1473, complete genome
TTAAAACTGGATCCAGGTTGTTCCCACCTGGATCTCCTAACGGGAGTAGTACACTATTATTACGGTAATTTTGTACGCCAGTTTTATGATCCCCTCCCCCTTTTGTAACTTAGAAGTTAAACAAAATGACCAATAGGCGGCAATCTCCCAGATTGTCAAAGGTCAAGCACTTCTGTTTCCCCGGTCAAAGCTGATATGCTCCAACAGGGCAAAAACAGCTGAGATCGTTACCCGCAAAGTGCCTACGCAAAGCTTAGTAACACTTTTGAAGTTACGTGGTTGGTCGCTCAGCCAAACCCCATGGTAGACCTGGCAGATGA...
103,711
ON881121.1
rhinovirus A61
Xie,Z. Sr.
Beijing Pediatric Research Institute, Laboratory of Infection and Virology
China
2023-03-25
BCH19193
Rhinovirus A
Enterovirus
Picornaviridae
ssRNA(+)
7,111
GenBank
null
China
China
Homo sapiens
oronasopharynx
2019-11-18
null
null
Rhinovirus A61 isolate BCH19193, complete genome
TTAAAACTGGGTCTGGGTTGTCCCCACCCAGACCACCCACGTGGTGTTGTACACTGTTATTCCGGTAACTTTGTACGCCAGTTTTGAACTCCCCTTACCCCTTTGTAACTTAGAAGTTAAACAAACCGACCGATAGCAGGCAATCACCCAGATTGCTTATGGTCAAGCACTTCTGTTTCCCCGGTCTCCTTTGATATGCTCCACCAGGGCAAAAACAGAGTAGATCGTTATCCGCAAGATGCCTACGCAACGCCTAGTAGCATTTTGAAGTGATTTTGGCTGGTCGCTCATTTACAACCCCAGTAATAGACCTGGCAGAT...
17,222
ON881122.1
rhinovirus A61
Xie,Z. Sr.
Beijing Pediatric Research Institute, Laboratory of Infection and Virology
China
2023-03-25
GZFE19111
Rhinovirus A
Enterovirus
Picornaviridae
ssRNA(+)
7,111
GenBank
null
China
China
Homo sapiens
oronasopharynx
2019-09-20
null
null
Rhinovirus A61 isolate GZFE19111, complete genome
TTAAAACTGGGTCTGGGTTGTCCCCACCCAGACCACCCACGTGGTGTTGTACACTGTTATTCCGGTAACTTTGTACGCCAGTTTTGAACTCCCCTTACCCCTTTGCAACTTAGAAGTTAAACAAACCGACCGATAGCAGGCAATCACCCAGATTGCTTATGGTCAAGTACTTCTGTTTCCCCGGTCTCCTTTGATATGCTCCACCAGGGCAAAAACAGAGTAGATCGTTATCCGCAAGATGCCTACGCAACGCCTAGTAGCATTTTGAAGTAATTTTGGCTGGTCGCTCATTTACAACCCCAGTAATAGACCTGGCAGAT...
17,223
OL961529.1
rhinovirus A61
Greninger,A.L., Xie,H., Cruz,K., Sereewit,J., Phung,Q., Lin,M.J.
UW Virology, DLMP
USA
2022-01-04
null
Rhinovirus A
Enterovirus
Picornaviridae
ssRNA(+)
7,110
GenBank
null
USA
USA
Homo sapiens
null
2021-07-09
SAMN23789517
PRJNA1066815
Rhinovirus A61 strain RvA61/USA/2021/JS4VWQ, complete genome
TTAAAACTGGGTCTGGGTTGTCCCCACCCAGACCACACACGTGGTGTTGTACACTGTTATCCCGGTAACTTTGTACGCCAGTTTTGAACTCCCCTACCCCTTTTGCAACTTAGAAGTTATACACACCGACCAACAGCAGACAATCATCCAGATTGTTTATGGTCAAGCACTTCTGTCTCCCCGGTCTCCTCTGATATGCTCCACCAGGGCAAAAACAGAGTAGATCGTTACCCGCAAGATGCCTACGCAACGCCTAGTAACACTTTGAAGTGATTTTGGTTGGTCGCTCATTTACAACCCCAGTAATAGACCTGGCAGAT...
34,110
OM001355.1
rhinovirus A61
Greninger,A.L., Xie,H., Cruz,K., Sereewit,J., Phung,Q., Lin,M.J.
UW Virology, DLMP
USA
2022-01-04
null
Rhinovirus A
Enterovirus
Picornaviridae
ssRNA(+)
7,110
GenBank
null
USA
USA
Homo sapiens
null
2021-07-09
SAMN24289195
PRJNA1066815
Rhinovirus A61 strain RvA61/USA/2021/2EX6MN, complete genome
TTAAAACTGGGTCTGGGTTGTCCCCACCCAGACCACACACGTGGTGTTGTACACTGTTATCCCGGTAACTTTGTACGCCAGTTTTGAACTCCCCTACCCCTTTTGCAACTTAGAAGTTATACACACCGACCAACAGCAGACAATCATCCAGATTGTTTATGGTCAAGCACTTCTGTCTCCCCGGTCTCCTCTGATATGCTCCACCAGGGCAAAAACAGAGTAGATCGTTACCCGCAAGATGCCTACGCAACGCCTAGTAACACTTTGAAGTGATTTTGGTTGGTCGCTCATTTACAACCCCAGTAATAGACCTGGCAGAT...
34,143
OM001428.1
rhinovirus A61
Greninger,A.L., Xie,H., Cruz,K., Sereewit,J., Phung,Q., Lin,M.J.
UW Virology, DLMP
USA
2022-01-04
null
Rhinovirus A
Enterovirus
Picornaviridae
ssRNA(+)
7,084
GenBank
null
USA
USA
Homo sapiens
null
2021
SAMN24255333
PRJNA723895
Rhinovirus A61 strain RvA61/USA/2021/FUT2YA, complete genome
ACCCAGACCACCCACGTGGTGTTGTACACTGTTATCCCGGTAACTTTGTACGCCAGTTTGAGCTCCCTTACCCCTTTTGTAACTTAGAAGTTATACACACCGACCAACAGCAGATAATCATCCAGATTGTTTATGGTCAAGCACTTCTGTCTCCCCGGTCTCCTCTGATATGCTCCACCAGGGCAAAAACAGAGTAGATCGTTATCCGCAAGATGCCTACGCAACGCCTAGTAACACTTTGAAGTGATTTTGGTTGGTCGCTCATTTACAAACCCAGTAATAGACCTGGCAGATGAGGCTAGATGTTCCCCACTGGCGAC...
34,215
OK254882.1
rhinovirus A61
Greninger,A.L., Xie,H., Cruz,K., Phung,Q., Lin,M.J.
UW Virology, DLMP
USA
2021-12-11
null
Rhinovirus A
Enterovirus
Picornaviridae
ssRNA(+)
7,109
GenBank
null
USA
USA
Homo sapiens
null
2021-06-21
SAMN21173644
PRJNA1066815
Rhinovirus A61 strain RvA61/USA/2021/ZXE7KZ, complete genome
TTAAAACTGGGTCTGGGTTGTCCCCACCCAGACCACCCACGTGGTGTTGTACACTGTTATCCCGGTAACTTTGTACGCCAGTTTTGAACTCCCCTACCCCTTTTGCAACTTAGAAGTTATACACACCGACCAACAGCAGACAATCATCCAGATTGTTTATGGTCAAGCACTTCTGTCTCCCCGGTCTCCTCTGATATGCTCCACCAGGGCAAAAACAGAGTAGATCGTTACCCGCAAGATGCCTACGCAACGCCTAGTAACACTTTGAAGTGATTTTGGTTGGTCGCTCATTTACAACCCCAGTAATAGACCTGGCAGAT...
35,323
OK649367.1
rhinovirus A61
Greninger,A.L., Xie,H., Cruz,K., Phung,Q., Lin,M.J.
UW Virology, DLMP
USA
2021-12-11
null
Rhinovirus A
Enterovirus
Picornaviridae
ssRNA(+)
7,088
GenBank
null
USA
USA
Homo sapiens
null
2021
SAMN22330330
PRJNA723895
Rhinovirus A61 strain RvA61/USA/2021/5D9SG5, complete genome
ACCCAGACCACCCACGTGGTGTTGTACACTGTTATCCCGGTAACTTTGTACGCCAGTTTTAAACTCCCTTACCCCTCTTTGTAACTTAGAAGTTAAACACACTGACCAATAGCAGACAATCATCCAGATTGTTTATGGTCAAGCACTTCTGTTTCCCCGGTCTCCTCTGATATGCTCCACCAGGGCAAAAACAGAGTAGATCGTTACCCGCAAGATGCCTACGCAACGCCTAGTAACACTTTGAAGTAATCTTGGTTGGTCGCTCATTTACAACCCCAGTAATAGACCTGGCAGATGAGGCTAGATGTTCCCCACTGGCG...
35,387
OK161354.1
rhinovirus A61
Greninger,A.L., Xie,H., Cruz,K., Phung,Q., Lin,M.J.
UW Virology, DLMP
USA
2021-09-28
null
Rhinovirus A
Enterovirus
Picornaviridae
ssRNA(+)
7,110
GenBank
null
USA
USA
Homo sapiens
null
2021-06-08
SAMN20932964
PRJNA1066815
Rhinovirus A61 strain RvA61/USA/2021/5CMGVK, complete genome
TTAAAACTGGGTCTGGGTTGTCCCCACCCAGACCACCCACGTGGTGTTGTACACTGTTATCCCGGTAACTTTGTACGCCAGTTTTGAACTCCCCTACCCCTTTTGCAACTTAGAAGTTATACACACCGACCAACAGCAGACAATCATCCAGATTGTTTATGGTCAAGCACTTCTGTCTCCCCGGTCTCCTCTGATATGCTCCACCAGGGCAAAAACAGAGTAGATCGTTACCCGCAAGATGCCTACGCAACGCCTAGTAACACTTTGAAGTGATTTTGGTTGGTCGCTCATTTACAACCCCAGTAATAGACCTGGCAGAT...
37,617
OK181486.1
rhinovirus A61
Greninger,A.L., Xie,H., Cruz,K., Phung,Q., Lin,M.J.
UW Virology, DLMP
USA
2021-09-28
null
Rhinovirus A
Enterovirus
Picornaviridae
ssRNA(+)
7,085
GenBank
null
USA
USA
Homo sapiens
null
2021-06-21
SAMN20933053
PRJNA1066815
Rhinovirus A61 strain RvA61/USA/2021/MEL8WE, complete genome
ACCCAGACCACCCACGTGGTGTTGTACACTGTTATCCCGGTAACTTTGTACGCCAGTTTTGAGCTCCCTTACCCCTTTTGTAACTTAGAAGTTATACACACCGACCAAGAGCAGACAATCATCCAGATTGTTTATGGTCAAGCACTTCTGTCTCCCCGGTCTCCTCTGATATGCTCCACCAGGGCAAAAACAGAGTAGATCGTTATCCGCAAGATGCCTACGCAACGCCTAGTAACACTTTGAAGTGATTTTGGTTGGTCGCTCATTTACAAACCCAGTAATAGACCTGGCAGATGAGGCTAGATGTTCCCCACTGGCGA...
37,709
MZ363465.1
rhinovirus A61
Greninger,A.L., Xie,H., Cruz,K., Phung,Q., Lin,M.J.
UW Virology, DLMP
USA
2021-06-15
XSS275
Rhinovirus A
Enterovirus
Picornaviridae
ssRNA(+)
7,107
GenBank
null
USA
USA
Homo sapiens
null
2021-05-06
SAMN19490566
PRJNA1066815
Rhinovirus A61 strain RvA61/USA/2021/XSS275, complete genome
TTAAAACTGGGTCTGGGTTGTCCCCACCCAGACCACCCACGTGGTGTTGTACACTGTTATTCCGGTAACTTTGTACGCCAGTTTTAAACTCCCTTACCCCTTTGTAACTTAGAAGTTAAACAAACCGACCGATAGCAGGCAATCACCCAGATTGCTTATGGTCAAGCACTTCTGTCTCCCCGGTCTCCTTTGATATGCTCCACCAGGGCAAAAACAGAGTGGATCGTTATCCGCAAGATGCCTACGCAACGCCTAGTAGCATTTTGAAGTAACTTTGGCTGGTTGCTCATTTACAATCCCAGTAATAGACCTGGCAGATG...
41,542
KY369886.1
rhinovirus A61
Greninger,A.L., Makhsous,N., Kuypers,J.M., Shean,R.C., Jerome,K.R.
UW, Lab Medicine
USA
2017-01-15
null
Rhinovirus A
Enterovirus
Picornaviridae
ssRNA(+)
7,112
GenBank
null
USA
USA
Homo sapiens
null
2016
null
PRJNA338014
Rhinovirus A61 strain SC628, complete genome
TTAAAACTGGGTCTGGGTTGTCCCCACCCAGACCACCCACGTGGTGTTGTACACTGTTATTCCGGTAACTTTGTACGCCAGTTTTGAACTCCCCTTACCCCTTTTGTAACTTAGAAGTTAAACAAACCGACCGATAGCAGGCAATCACCCAGATTGCTTATGGTCAAGCACTTCTGTCTCCCCGGTCTCCTTTGATATGCTCCACCAGGGCAAAAACAGAGTAGATCGTTATCCGCAAGATGCCTACGCAACGCCTAGTAGCATTTTGAAGTAATTTTGGCTGGTCGCTCATTTACAACCCCAGTAATAGACCTGGCAGA...
78,640
FJ445144.1
rhinovirus A61
Palmenberg,A.C., Spiro,D., Kuzmickas,R., Wang,S., Djikeng,A., Rathe,J.A., Fraser-Liggett,C.M., Liggett,S.B., Overton,L., Tsitrin,T., Gallagher,T., Liu,J., Pushparaj,V., Tallon,L.J.
University of Maryland School of Medicine
USA
2009-02-13
null
Rhinovirus A
Enterovirus
Picornaviridae
ssRNA(+)
7,139
GenBank
1
null
null
null
null
null
null
PRJNA32533
Human rhinovirus 61 strain ATCC VR-1171, complete genome
TTAAAACTGGGTCTGGGTTGCTCCCACCCAGACCACCCATGTGGTGTTGTACACTGTTATTCCGGTAACTTTGTACGCCAGTTTTGAACTCCCCTACCCCTTTTGTAACTTAGAAGCTAAACACATCGACCAATAGCAGGCAATCACCCAGATTGCTTATGGTCAAGTACTTCTGTTTCCCCGGTCTCCTCTGATATGCTCTACCAGGGCAAAAACAGAGTAGATCGTTATCCGCAAGATGCCTACGCAACGCCTAGTAACACTTTGAAGTGTTTTTGGTTGGTCGCTCAGTTACAACCCCAGTAATAGACCTGGCAGAT...
103,712
OK539487.1
rhinovirus A66
Greninger,A.L., Xie,H., Cruz,K., Phung,Q., Lin,M.J.
UW Virology, DLMP
USA
2021-12-11
null
Rhinovirus A
Enterovirus
Picornaviridae
ssRNA(+)
7,063
GenBank
null
USA
USA
Homo sapiens
null
2021-07-02
SAMN22069241
PRJNA1066815
Rhinovirus A66 strain RvA66/USA/2021/H8TU7P, complete genome
GTGGTACTCTATTATCACGGTAATCTTGTACGCCAGTTTTAWATCCCCCCCCCCCCTTGTAACTTAGAAGTTATGAACACAGACCAATAGGCGGTGATCACCCAGATCACTTAAGGTCAAGCACTTCTGTTTCCCCGGTCAACGTTGATATGCTCCACCAGGGCAAAAACAACAGAGATCGTTATCCGCAAGGTGCCTACGCAAAGCCTAGTAACCTCTTGGAGAGTATATGGTTGGTCGCTCAGCTATTCCCCATAGTAGACCTGGCAGATGAGGCTAGAAACTCCCCACTGGTAACAGTGTTCTAGCCTGCGTGGCTG...
35,351
OK649378.1
rhinovirus A66
Greninger,A.L., Xie,H., Cruz,K., Phung,Q., Lin,M.J.
UW Virology, DLMP
USA
2021-12-11
null
Rhinovirus A
Enterovirus
Picornaviridae
ssRNA(+)
7,009
GenBank
null
USA
USA
Homo sapiens
null
2021-06-16
SAMN22330340
PRJNA1066815
Rhinovirus A66 strain RvA66/USA/2021/94WHA6, complete genome
CTTTGTAACTTAGAAGTTATGAACATAGACCAATAGGTGGTGATCATCCAGATCACTTAAGGTCAAGCACTTCTGTTTCCCCGGTCAACGTTGATATGCTCCACCAGGGCAAAAACAACAGAGATCGTTATCCGCAAGGTGCCTACGCAAAGCCTAGTAACCCCTTGGAGAGTATGTGGTTGGTCGCTCAGCTATTCCCAATAGTAGACCTGGCAGATGAGGCTAGAAGTTCCCCACTGGTAACAGTGTTCTAGCCTGCGTGGCTGCCTGCGCACTCTTATGAGTGCGAAGCCATATATTTGACAAGGTGCGAAGAGCCC...
35,398
OK161406.1
rhinovirus A66
Greninger,A.L., Xie,H., Cruz,K., Phung,Q., Lin,M.J.
UW Virology, DLMP
USA
2021-09-28
null
Rhinovirus A
Enterovirus
Picornaviridae
ssRNA(+)
7,065
GenBank
null
USA
USA
Homo sapiens
null
2021-06-15
SAMN20933111
PRJNA1066815
Rhinovirus A66 strain RvA66/USA/2021/ZVWUUZ, complete genome
GAGTGGTACTCTATTATTCCGGTAATCTTGTACGCCAGTTTTATATCCCCCCCCCCTTTTGTAACTTAGAAGTTATGAACATAGACCAATAGGTGGTGATCACCCAGATCACTTAAGGTCAAGCACTTCTGTTTCCCCGGTCGACGTTGATATGCTCCACCAGGGCAAAAACAACAGAGATCGTTATCCGCAAGGTGCCTACGCAAAGCCTAGTAACCCCTTGGAGAGTATGTGGTTGGTCGCTCAGCTATTCCCCATAGTAGACCTGGCAGATGAGGCTAGAAATTCCCCACTGGTAACAGTGTTCTAGCCTGCGTGGC...
37,669
MZ835579.1
rhinovirus A66
Greninger,A.L., Xie,H., Cruz,K., Phung,Q., Lin,M.J.
UW Virology, DLMP
USA
2021-09-07
null
Rhinovirus A
Enterovirus
Picornaviridae
ssRNA(+)
7,054
GenBank
null
USA
USA
Homo sapiens
null
2021-06-07
SAMN20243961
PRJNA1066815
Rhinovirus A66 strain RvA66/USA/2021/H5ZT4C, complete genome
CTATTATTCCGGTAATCTTGTACGCCAGTTTTATATCCCCCCCCCTTTTGTAACTTAGAAGTTATGAACATAGACCAATAGGTGGTGATCACCCAGATCACTTAAGGTCAAGCACTTCTGTTTCCCCGGTCGACGTTGATATGCTCCACCAGGGCAAAAACAACAGAGATCGTTATCCGCAAGGTGCCTACGCAAAGCCTAGTAACCCCTTGGAGAGTATGTGGTTGGTCGCTCAGCTATTCCCCATAGTAGACCTGGCAGATGAGGCTAGAAATTCCCCACTGGTAACAGTGTTCTAGCCTGCGTGGCTGCCTGCGCAC...
38,155
MZ268663.1
rhinovirus A66
Greninger,A.L., Xie,H., Cruz,K., Phung,Q., Lin,M.J.
UW Virology, DLMP
USA
2021-06-15
AY5HJB
Rhinovirus A
Enterovirus
Picornaviridae
ssRNA(+)
7,054
GenBank
null
USA
USA
Homo sapiens
null
2021-04-28
SAMN19177321
PRJNA1066815
Rhinovirus A66 strain RvA66/USA/2021/AY5HJB, complete genome
TATTATTCCGGTAATCTTGTACGCCAGTTTTATATNCCCCCCCCCTTTTGTAACTTAGAAGTTATGAACATAGACCAATAGGTGGTGATCACCCAGATCACTTAAGGTCAAGCACTTCTGTTTCCCCGGTCGACGTTGATATGCTCCACCAGGGCAAAAACAACAGAGATCGTTATCCGCAAGGTGCCTACGCAAAGCCTAGTAACCCCTTGGAGAGTATGTGGTTGGTCGCTCAGCTATTCCCCATAGTAGACCTGGCAGATGAGGCTAGAAATTCCCCACTGGTAACAGTGTTCTAGCCTGCGTGGCTGCCTGCGCAC...
41,393
MN749158.1
rhinovirus A66
Addetia,A., Phung,Q., Greninger,A.L.
University of Washington, UW Virology
USA
2020-01-20
null
Rhinovirus A
Enterovirus
Picornaviridae
ssRNA(+)
7,112
GenBank
null
USA
USA
Homo sapiens
null
2015
null
null
Rhinovirus A66 strain 12O6, complete genome
TTAAAACTGGATCTAGGTTGTCCCCACCTAGATCTCCCATGTGGAGTGGTACTCTATTATTCCGGTAATCTTGTACGCCAGTTTTATATCCCCTCCCCCTTTTGTAACTTAGAAGTTATGAACATAGACCAATAGGTGGTGATCATCCAGATCACTTAAGGTCAAGCACTTCTGTTTCCCCGGTCGACGTTGATATGCTCCACCAGGGCAAAAACAACAGAGATCGTTATCCGCAAGGTGCCTACACAAAGCCTAGTAACCCCTTGGAGAGTATGTGGTTGGTCGCTCAGCTATTCCCCATAGTAGACCTGGCAGATGAG...
54,620
FJ445148.1
rhinovirus A66
Palmenberg,A.C., Spiro,D., Kuzmickas,R., Wang,S., Djikeng,A., Rathe,J.A., Fraser-Liggett,C.M., Liggett,S.B., Overton,L., Tsitrin,T., Gallagher,T., Liu,J., Pushparaj,V., Tallon,L.J.
University of Maryland School of Medicine
USA
2009-02-13
null
Rhinovirus A
Enterovirus
Picornaviridae
ssRNA(+)
7,139
GenBank
1
null
null
null
null
null
null
PRJNA32533
Human rhinovirus 66 strain ATCC VR-1176, complete genome
TTAAAACTGGATCTAGGTTGTTCCCACCTAGATCTCCCATGTGGAGTAGTACTCTATTATTACGGTAATTTTGTACGCCAGTTTTATATCCCCTTCCCCTTTTGTAACTTAGAAGTCGTGAACACAGACCAATAGGTGGCGATCACCCAGATCGCTTAAGGTCAAGCACTTCTGTTTCCCCGGTCAACGTTGATATGCTCCACCAGGGCAAAAACAACGGAGATCGTTATCCGCAAGGTGCCTACGCAAAGCCTAGTAACCTCTTGGAGGATATATGGTTGGTCGCTCAGCTATACCCCATAGTAGACCTGGCAGATGAG...
103,716
OL638431.1
rhinovirus A67
Greninger,A.L., Xie,H., Cruz,K., Phung,Q., Lin,M.J.
UW Virology, DLMP
USA
2022-01-04
EM2BBA
Rhinovirus A
Enterovirus
Picornaviridae
ssRNA(+)
7,089
GenBank
null
USA
USA
Homo sapiens
null
2021-07-10
SAMN23213167
PRJNA1066815
Rhinovirus A67 strain RvA67/USA/2021/EM2BBA, complete genome
TGTTATTACGGTAACCTTGTACGCCAGTTTTGCCACCCTTCCCTAATATGTAACTTAGAAGTTTGAGCAACACGACCAATAGGTGATAATCATCCAGATTGTCAAAGGTCAAGCACTTCTGTTTCCCCGGTCGATGAGGATATGCTTTACCCAAGGCAAAAACCTTAAAGATCGTTATCCACACACTGCCTACACAGAGCCTAGTACCACTTTTGATGTAATTAGGTTGGTCGCTCCCTGCAAACCCAGCAGTAGACCTGGCAGATGAGGCTGGACATTCCCCACTGGCGACAGTGGTCCAGCCTGCGTGGCTGCCTGCT...
34,063
OM001385.1
rhinovirus A67
Greninger,A.L., Xie,H., Cruz,K., Sereewit,J., Phung,Q., Lin,M.J.
UW Virology, DLMP
USA
2022-01-04
null
Rhinovirus A
Enterovirus
Picornaviridae
ssRNA(+)
7,089
GenBank
null
USA
USA
Homo sapiens
null
2021-07-02
SAMN24289225
PRJNA1066815
Rhinovirus A67 strain RvA67/USA/2021/MU2GFR, complete genome
TGTTATTACGGTAACCTTGTACGCCAGTTTTGCCACCCTTCCCTAATATGTAACTTAGAAGTTTGAGCAACACGACCAATAGGTGATAATCATCCAGATTGTCAAAGGTCAAGCACTTCTGTTTCCCCGGTTGATGAGGATATGCTTTACCCAAGGCAAAAACCTTAAAGATCGTTATCCACACACTGCCTACACAGAGCCTAGTACCACTTTTGATGTAATTAGGTTGGTCGCTCCCTGCAAACCCAGCAGTAGACCTGGCAGATGAGGCTGGACATTCCCCACTGGCGACAGTGGTCCAGCCTGCGTGGCTGCCTGCT...
34,173
OM001405.1
rhinovirus A67
Greninger,A.L., Xie,H., Cruz,K., Sereewit,J., Phung,Q., Lin,M.J.
UW Virology, DLMP
USA
2022-01-04
null
Rhinovirus A
Enterovirus
Picornaviridae
ssRNA(+)
7,089
GenBank
null
USA
USA
Homo sapiens
null
2021-06-22
SAMN24255315
PRJNA1066815
Rhinovirus A67 strain RvA67/USA/2021/8KU2BU, complete genome
TGTTATTACGGTAACCTTGTACGCCAGTTTTGCCACCCTTCCCTAATATGTAACTTAGAAGTTTGAGCAACACGACCAATAGGTGATAATCATCCAGATTGTCAAAGGTCAAGCACTTCTGTTTCCCCGGTTGATGAGGATATGCTTTACCCAAGGCAAAAACCTTAAAGATCGTTATCCACACACTGCCTACACAGAGCCTAGTACCACTTTTGATGTAATTAGGTTGGTCGCTCCCTGCAAACCCAGCAGTAGACCTGGCAGATGAGGCTGGACATTCCCCACTGGCGACAGTGGTCCAGCCTGCGTGGCTGCCTGCT...
34,192
OK254824.1
rhinovirus A67
Greninger,A.L., Xie,H., Cruz,K., Phung,Q., Lin,M.J.
UW Virology, DLMP
USA
2021-12-11
null
Rhinovirus A
Enterovirus
Picornaviridae
ssRNA(+)
7,082
GenBank
null
USA
USA
Homo sapiens
null
2021-06-28
SAMN21173554
PRJNA1066815
Rhinovirus A67 strain RvA67/USA/2021/2FGA4A, complete genome
TGTTATTACGGTAACCTTGTACGCCAGTTTTGCCACCCTTCCCTAATATGTAACTTAGAAGTTTGAGCAACACGACCAATAGGTGATAATCATCCAGATTGTCAAAGGTCAAGCACTTCTGTTTCCCCGGTTGATGAGGATATGCTTTACCCAAGGCAAAAACCTTAAAGATCGTTATCCACACACTGCCTACACAGAGCCTAGTACCACTTTTGATGTAATTAGGTTGGTCGCTCCCTGCAAACCCAGCAGTAGACCTGGCAGATGAGGCTGGACATTCCCCACTGGCGACAGTGGTCCAGCCTGCGTGGCTGCCTGCT...
35,265
OK539464.1
rhinovirus A67
Greninger,A.L., Xie,H., Cruz,K., Phung,Q., Lin,M.J.
UW Virology, DLMP
USA
2021-12-11
null
Rhinovirus A
Enterovirus
Picornaviridae
ssRNA(+)
7,089
GenBank
null
USA
USA
Homo sapiens
null
2021
SAMN22069214
PRJNA723895
Rhinovirus A67 strain RvA67/USA/2021/5ECDW6, complete genome
TGTTATTACGGTAACCTTGTACGCCAGTTTTGCCACCCTTCCCTAATATGTAACTTAGAAGTTTGAGCAACACGACCAATAGGTGATAATCATCCAGATTGTCAAAGGTCAAGCACTTCTGTTTCCCCGGTCGATGAGGATATGCTTTACCCAAGGCAAAAACCTTAAAGATCGTTATCCACACACTGCCTACACAGAGCCTAGTACCACTTTTGATGTAATTAGGTTGGTCGCTCCCTGCAAACCCAGCAGTAGACCTGGCAGATGAGGCTGGACATTCCCCACTGGCGACAGTGGTCCAGCCTGCGTGGCTGCCTGCT...
35,328
OK539494.1
rhinovirus A67
Greninger,A.L., Xie,H., Cruz,K., Phung,Q., Lin,M.J.
UW Virology, DLMP
USA
2021-12-11
null
Rhinovirus A
Enterovirus
Picornaviridae
ssRNA(+)
7,089
GenBank
null
USA
USA
Homo sapiens
null
2021-07-14
SAMN22069248
PRJNA1066815
Rhinovirus A67 strain RvA67/USA/2021/JXLCTN, complete genome
TGTTATTACGGTAACCTTGTACGCCAGTTTTGCCACCCTTCCCTAATATGTAACTTAGAAGTTTGAGCAACACGACCAATAGGTGATAATCATCCAGATTGTCAAAGGTCAAGCACTTCTGTTTCCCCGGTCGATGAGGATATGCTTTACCCAAGGCAAAAACCTTAAAGATCGTTATCCACACACTGCCTACACAGAGCCTAGTACCACTTTTGATGTAATTAGGTTGGTCGCTCCCTGCAAACCCAGCAGTAGACCTGGCAGATGAGGCTGGACATTCCCCACTGGCGACAGTGGTCCAGCCTGCGTGGCTGCCTGCT...
35,358
OK539513.1
rhinovirus A67
Greninger,A.L., Xie,H., Cruz,K., Phung,Q., Lin,M.J.
UW Virology, DLMP
USA
2021-12-11
null
Rhinovirus A
Enterovirus
Picornaviridae
ssRNA(+)
7,064
GenBank
null
USA
USA
Homo sapiens
null
2021-07-14
SAMN22069274
PRJNA1066815
Rhinovirus A67 strain RvA67/USA/2021/Z5VVEY, complete genome
TGTTATTACGGTAACCTTGTACGCCAGTTTTGCCACCCTTCCCTAATATGTAACTTAGAAGTTTGAGCAACACGACCAATAGGTGATAATCATCCAGATTGTCAAAGGTCAAGCACTTCTGTTTCCCCGGTCGATGAGGATATGCTTTACCCAAGGCAAAAACCTTAAAGATCGTTATCCACACACTGCCTACACAGAGCCTAGTACCACTTTTGATGTAATTAGGTTGGTCACTCCCTGCAAACCCAGCAGTAGACCTGGCAGATGAGGCTGGACATTCCCCACTGGCGACAGTGGTCCAGCCTGCGTGGCTGCCTGCT...
35,377
OK649381.1
rhinovirus A67
Greninger,A.L., Xie,H., Cruz,K., Phung,Q., Lin,M.J.
UW Virology, DLMP
USA
2021-12-11
null
Rhinovirus A
Enterovirus
Picornaviridae
ssRNA(+)
7,085
GenBank
null
USA
USA
Homo sapiens
null
2021-06-16
SAMN22330343
PRJNA1066815
Rhinovirus A67 strain RvA67/USA/2021/B6SJ3U, complete genome
TGTTATTACGGTAACCTTGTACGCCAGTTTTGCCACCCTTCCCTAATATGTAACTTAGAAGTTTGAGCAACACGACCAATAGGTGATAATCATCCAGATTGTCAAAGGTCAAGCACTTCTGTTTCCCCGGTTGATGAGGATATGCTTTACCCAAGGCAAAAACCTTAAAGATCGTTATCCACACACTGCCTACACAGAGCCTAGTACCACTTTTGATGTAATTAGGTTGGTCGCTCCCTGCAAACCCAGCAGTAGACCTGGCAGATGAGGCTGGACATTCCCCACTGGCGACAGTGGTCCAGCCTGCGTGGCTGCCTGCT...
35,401
OK017917.1
rhinovirus A67
Greninger,A.L., Xie,H., Cruz,K., Phung,Q., Lin,M.J.
UW Virology, DLMP
USA
2021-09-28
null
Rhinovirus A
Enterovirus
Picornaviridae
ssRNA(+)
7,089
GenBank
null
USA
USA
Homo sapiens
null
2021-05-27
SAMN20216552
PRJNA1066815
Rhinovirus A67 strain RvA67/USA/2021/58CZ9N, complete genome
TGTTATTACGGTAACCTTGTACGCCAGTTTTGCCACCCTTCCCTAATATGTAACTTAGAAGTTTGAGCAACACGACCAATAGGTGATAATCATCCAGATTGTCAAAGGTCAAGCACTTCTGTTTCCCCGGTCAATGAGGATATGCTTTACCCAAGGCAAAAACCTTAAAGATCGTTATCCACACACTGCCTACACAGAGCCTAGTACCACTTTTGATGTAATTAGGTTGGTCGCTCCCTGCAAACCCAGCAGTAGACCTGGCAGATGAGGCTGGACATTCCCCACTGGCGACAGTGGTCCAGCCTGCGTGGCTGCCTGCT...
37,562
OK181491.1
rhinovirus A67
Greninger,A.L., Xie,H., Cruz,K., Phung,Q., Lin,M.J.
UW Virology, DLMP
USA
2021-09-28
null
Rhinovirus A
Enterovirus
Picornaviridae
ssRNA(+)
7,089
GenBank
null
USA
USA
Homo sapiens
null
2021-06-18
SAMN20933063
PRJNA1066815
Rhinovirus A67 strain RvA67/USA/2021/PFJBXD, complete genome
TGTTATTACGGTAACCTTGTACGCCAGTTTTGCCACCCTTCCCTAATATGTAACTTAGAAGTTTGAGCAACACGACCAATAGGTGATAATCATCCAGATTGTCAAAGGTCAAGCACTTCTGTTTCCCCGGTCGATGAGGATATGCTTTACCCAAGGCAAAAACCTTAAAGATCGTTATCCACACACTGCCTACACAGAGCCTAGTACCACTTTTGATGTAATTAGGTTGGTCGCTCCCTGCAAACCCAGCAGTAGACCTGGCAGATGAGGCTGGACATTCCCCACTGGCGACAGTGGTCCAGCCTGCGTGGCTGCCTGCT...
37,714
MZ670583.1
rhinovirus A67
Greninger,A.L., Xie,H., Cruz,K., Phung,Q., Lin,M.J.
UW Virology, DLMP
USA
2021-09-07
null
Rhinovirus A
Enterovirus
Picornaviridae
ssRNA(+)
7,089
GenBank
null
USA
USA
Homo sapiens
null
2021-06-09
SAMN20216638
PRJNA1066815
Rhinovirus A67 strain RvA67/USA/2021/K6BMNW, complete genome
TGTTATTACGGTAACCTTGTACGCCAGTTTTGCCACCCTTCCCTAATATGTAACTTAGAAGTTTGAGCAACACGACCAATAGGTGATAATCATCCAGATTGTCAAAGGTCAAGCACTTCTGTTTCCCCGGTCAATGAGGATATGCTTTACCCAAGGCAAAAACCTTAAAGATCGTTATCCACACACTGCCTACACAGAGCCTAGTACCACTTTTGATGTAATTAGGTTGGTCGCTCCCTGCAAACCCAGCAGTAGACCTGGCAGATGAGGCTGGACATTCCCCACTGGCGACAGTGGTCCAGCCTGCGTGGCTGCCTGCT...
38,120
MZ629170.1
rhinovirus A67
Greninger,A.L., Xie,H., Cruz,K., Phung,Q., Lin,M.J.
UW Virology, DLMP
USA
2021-08-08
null
Rhinovirus A
Enterovirus
Picornaviridae
ssRNA(+)
7,072
GenBank
null
USA
USA
Homo sapiens
null
2021-06-03
SAMN20216721
PRJNA1066815
Rhinovirus A67 strain RvA67/USA/2021/VFTX7T, complete genome
TGTACGCCAGTTTTGCCACCCTTCCCTAATATGCAACTTAGAAGTTTGAGCAACACGACCAATAGGTGATAATCATCCAGATTGTCAAAGGTCAAGCACTTCTGTTTCCCCGGTCGATGAGGATATGCTTTACCCAAGGCAAAAACCTTAAAGATCGTTATCCACGCACTGCCTACACAGAGCCTAGTACCACTTTTGATGTAATTAGGTTGGTCGCTCCCTGCAAACCCAGCAGTAGACCTGGCAGATGAGGCTGGACATTCCCCACTGGCGACAGTGGTCCAGCCTGCGTGGCTGCCTGCTCACCCTATTGGGTGAGA...
39,645
MZ322931.1
rhinovirus A67
Greninger,A.L., Xie,H., Cruz,K., Phung,Q., Lin,M.J.
UW Virology, DLMP
USA
2021-06-15
YAEPRB
Rhinovirus A
Enterovirus
Picornaviridae
ssRNA(+)
7,082
GenBank
null
USA
USA
Homo sapiens
null
2021-04-26
SAMN19131222
PRJNA1066815
Rhinovirus A67 strain RvA67/USA/2021/YAEPRB, complete genome
TGTTATTACGGTAACCTTGTACGCCAGTTTTGCCACCCTTCCCTAATATGTAACTTAGAAGTTTGAGCAACACGACCAATAGGTGATAATCATCCAGATTGTCAAAGGTCAAGCACTTCTGTTTCCCCGGTCGATGAGGATATGCTTTACCCAAGGCAAAAACCTTAAAGATCGTTATCCACACACTGCCTACACAGAGCCTAGTACCACTTTTGATGTAATTAGGTTGGTCGCTCCCTGCAAACCCAGCAGTAGACCTGGCAGATGAGGCTGGACATTCCCCACTGGCGACAGTGGTCCAGCCTGCGTGGCTGCCTGCT...
41,489
MW969534.1
rhinovirus A67
Greninger,A.L., Xie,H., Cruz,K., Phung,Q., Lin,M.J.
UW Virology, DLMP
USA
2021-05-15
69797
Rhinovirus A
Enterovirus
Picornaviridae
ssRNA(+)
7,089
GenBank
null
USA
USA
Homo sapiens
null
2021-02-22
SAMN20082358
PRJNA1066815
Rhinovirus A67 strain RvA67/USA/2021/69797, complete genome
TGTTATTACGGTAACCTTGTACGCCGGTTTTGCCACCCTTCCCTAATATGTAACTTAGAAGTTTGAGCAACACGACCAATAGGTGATAATCATCCAGATTGTCAAAGGTCAAGCACTTCTGTTTCCCCGGTCAATGAGGATATGCTTTACCCAAGGCAAAAACCTTAAAGATCGTTATCCACACACTGCCTACACAGAGCCTAGTACCACTTTCGATGTAATTAGGTTGGTCGCTCCCTGCAAACCCAGCAGTAGACCTGGCAGATGAGGCTGGACATTCCCCACTGGCGACAGTGGTCCAGCCTGCGTGGCTGCCTGCT...
41,993
FJ445149.1
rhinovirus A67
Palmenberg,A.C., Spiro,D., Kuzmickas,R., Wang,S., Djikeng,A., Rathe,J.A., Fraser-Liggett,C.M., Liggett,S.B., Overton,L., Tsitrin,T., Gallagher,T., Liu,J., Pushparaj,V., Tallon,L.J.
University of Maryland School of Medicine
USA
2009-02-13
null
Rhinovirus A
Enterovirus
Picornaviridae
ssRNA(+)
7,135
GenBank
1
null
null
null
null
null
null
PRJNA32533
Human rhinovirus 67 strain ATCC VR-1177, complete genome
TTAAAACTGGATCTAGGTTGTTCCCACCTAGATCTCCCAAGTGGAGTGGTACACTATTATCACGGTAATTTTGTACGCCGGTTTTATCTCCCCTTACCCCAAGTAACTTAGAAGTATTACATAAAGACCAACAGGCAGTGATTATCCAGATCACTAAAGGTCAAGCACTTCTGTCTCCCCGGTCAAAGTTGATATGCTCCAACAGGGCAAAAACAACTGAGATCGTTATCCGCAAAGTGCCTACGCAGAGCCTAGTAACTACCTTGAAATTACTTGGTTGGTCGTTCCACCAAACCCCATGGTAGACCTGGCAGATGAGG...
103,717
LC699414.1
rhinovirus A78
Egawa,K., Kakizaki,M., Kume,Y., Suwa,R., Kawase,M., Ono,T., Chishiki,M., Okabe,H., Norito,S., Sato,M., Sakuma,H., Suzuki,S., Hosoya,M., Takeda,M., Hashimoto,K., Shirato,K.
Department of Virology III; 4-7-1 Gakuen, Musashimurayama, Tokyo 208-0011
Japan
2022-03-23
HRV_A78_Fukushima_H260_2018
Rhinovirus A
Enterovirus
Picornaviridae
ssRNA(+)
7,180
GenBank
1
Japan: Fukushima
Japan
Homo sapiens
null
2018
SAMD00490724
PRJDB13572
Rhinovirus A78 HRV_A78_Fukushima_H260_2018 genomic RNA, complete genome
CATGGTTGTTCCCACCATGATTACCTACGGGTGTAGTACACTTGTATCCCGGTACATTTGTGCGCCAGTTTTATATCCCCTCCCCAATCGTAACTTAGAAGTTGGACATCACAAGATCAATAGGCGGTGGTTATCCAAACCATCAATGATCAAGCACTTCTGTTTCCCCGGTAGGTGTGAATATGCTTTAACCAAGGCAGAAGCTAATCCTATCGTTATCCGCAAGGTGCCTACGGGAAGCCTATTAACACCTTGGAAGAGATTTGGCTGGTCGCTCAGTTGCACAACCCCATGCAATAGACCTGGCAGATGAGGCTAGA...
32,233
OL638448.1
rhinovirus A78
Greninger,A.L., Xie,H., Cruz,K., Phung,Q., Lin,M.J.
UW Virology, DLMP
USA
2022-01-04
PN6LLL
Rhinovirus A
Enterovirus
Picornaviridae
ssRNA(+)
7,094
GenBank
null
USA
USA
Homo sapiens
null
2021
SAMN23213190
PRJNA723895
Rhinovirus A78 strain RvA78/USA/2021/PN6LLL, complete genome
GTGTAGTACACTTGTATCCCGGTACATTTGTGCGCCAGTTTTATATCCCCTCCCCAATCGTAACTTAGAAGCTGAACAACACAAGATCAATAGGCGGTGGTTATCCAAACCATCAATGATCAAGCACTTCTGTTTCCCCGGTAGGTGTGAATATGCTTTAACCAAGGCAGAAGCTGATCCTATCGTTATCCGCAAGGTGCCTACGGGAAGCCTATTAACACTTTGAAAGAGATTTGGCTGGTCGCTCAGTTGCACAACCCCATGCAATAGACCTGGCAGATGAGGCTAGACAAACCCCACCAGCGATGGTGGTCTAGCCT...
34,080