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Add processed MedMCQA splits and SFT files

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.gitattributes CHANGED
@@ -58,3 +58,5 @@ saved_model/**/* filter=lfs diff=lfs merge=lfs -text
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  # Video files - compressed
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  *.mp4 filter=lfs diff=lfs merge=lfs -text
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  *.webm filter=lfs diff=lfs merge=lfs -text
 
 
 
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  # Video files - compressed
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  *.mp4 filter=lfs diff=lfs merge=lfs -text
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  *.webm filter=lfs diff=lfs merge=lfs -text
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+ sft/sft_train_20000.jsonl filter=lfs diff=lfs merge=lfs -text
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+ train_20000.jsonl filter=lfs diff=lfs merge=lfs -text
README.md ADDED
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+ ---
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+ language:
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+ - en
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+ license: apache-2.0
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+ pretty_name: MedMCQA
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+ size_categories:
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+ - 10K<n<100K
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+ source_datasets:
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+ - openlifescienceai/medmcqa
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+ task_categories:
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+ - question-answering
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+ - multiple-choice
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+ tags:
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+ - medical
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+ - medmcqa
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+ dataset_info:
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+ - config_name: sft
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+ features:
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+ - name: prompt
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+ dtype: string
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+ - name: answer
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+ dtype: string
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+ splits:
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+ - name: train
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+ num_examples: 20000
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+ - name: validation
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+ num_examples: 200
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+ - config_name: train
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+ splits:
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+ - name: train
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+ num_examples: 20000
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+ - config_name: validation
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+ splits:
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+ - name: validation
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+ num_examples: 200
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+ - config_name: mia_members
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+ splits:
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+ - name: train
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+ num_examples: 2000
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+ - config_name: mia_nonmembers
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+ splits:
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+ - name: train
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+ num_examples: 2000
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+ - config_name: filtered
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+ splits:
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+ - name: train
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+ num_examples: 84403
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+ configs:
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+ - config_name: sft
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+ data_files:
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+ - split: train
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+ path: sft/sft_train_20000.jsonl
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+ - split: validation
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+ path: sft/sft_validation_200.jsonl
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+ - config_name: train
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+ data_files:
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+ - split: train
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+ path: train_20000.jsonl
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+ - config_name: validation
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+ data_files:
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+ - split: validation
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+ path: validation_200.jsonl
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+ - config_name: mia_members
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+ data_files:
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+ - split: train
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+ path: mia_members_2000.jsonl
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+ - config_name: mia_nonmembers
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+ data_files:
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+ - split: train
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+ path: mia_nonmembers_2000.jsonl
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+ - config_name: filtered
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+ data_files:
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+ - split: train
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+ path: medmcqa_filtered.parquet
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+ ---
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+
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+ # MedMCQA
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+
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+ 由 [openlifescienceai/medmcqa](https://huggingface.co/datasets/openlifescienceai/medmcqa) 的 train split 清洗、去重后划分得到。上游许可证为 Apache-2.0。
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+
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+ 默认配置 `sft` 可直接用于监督微调。`answer` 是完整解答加正确选项字母,不是单独的选项标签。
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+
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+ ```python
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+ from datasets import load_dataset
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+
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+ sft = load_dataset("HaolinRPI/medmcqa", "sft")
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+ train = load_dataset("HaolinRPI/medmcqa", "train", split="train")
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+ validation = load_dataset("HaolinRPI/medmcqa", "validation", split="validation")
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+ members = load_dataset("HaolinRPI/medmcqa", "mia_members", split="train")
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+ nonmembers = load_dataset("HaolinRPI/medmcqa", "mia_nonmembers", split="train")
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+ filtered = load_dataset("HaolinRPI/medmcqa", "filtered", split="train")
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+ ```
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+
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+ ## 划分
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+
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+ Training、MIA Non-member 和 Validation 的规范化 Question 互不重叠。MIA Member 是 Training 的子集。随机种子是 42。完整统计见 `split_manifest.json`。
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+
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+ | 文件 | 条数 | 用途 |
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+ |---|---:|---|
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+ | `sft/sft_train_20000.jsonl` | 20,000 | SFT 训练集,只含 `prompt` 和 `answer` |
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+ | `sft/sft_validation_200.jsonl` | 200 | SFT 验证集,只含 `prompt` 和 `answer` |
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+ | `train_20000.jsonl` | 20,000 | 训练样本,保留原始字段 |
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+ | `mia_members_2000.jsonl` | 2,000 | Training 内部的 MIA Member |
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+ | `mia_nonmembers_2000.jsonl` | 2,000 | 不参与训练的 MIA Non-member |
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+ | `validation_200.jsonl` | 200 | 独立验证样本 |
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+ | `medmcqa_filtered.parquet` | 84,403 | 全部合格记录,含未使用样本 |
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+
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+ ## SFT 文本
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+
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+ `prompt` 由题干、A–D 选项和指令 “Answer with the letter of the correct option.” 组成。`answer` 由解释和正确选项字母组成,字母单独占最后一行。
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+ size 92325023
mia_members_2000.jsonl ADDED
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mia_nonmembers_2000.jsonl ADDED
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split_manifest.json ADDED
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+ {
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+ "seed": 42,
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+ "rng": "random.Random (Mersenne Twister, Python stdlib)",
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+ "sampling_procedure": [
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+ "Filter and deduplicate in original dataset order, keeping the first question_key.",
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+ "Shuffle all filtered rows with Random(seed).",
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+ "Training is the first 20000 shuffled rows.",
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+ "MIA members are a Random.sample of 2000 positions inside training.",
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+ "MIA non-members are a Random.sample of 2000 positions from the non-training rows.",
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+ "Validation is a Random.sample of 200 positions from the still-unused rows."
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+ ],
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+ "source": {
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+ "dataset": "openlifescienceai/medmcqa",
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+ "split": "train"
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+ },
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+ "prompt_template": "{question}\\nA. {opa}\\nB. {opb}\\nC. {opc}\\nD. {opd}\\nReturn the correct option letter.",
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+ "reference_template": "{explanation}\\n{answer_letter}",
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+ "english_word_pattern": "[A-Za-z]+(?:['’-][A-Za-z]+)*",
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+ "question_key": "strip, collapse whitespace, casefold; original question is unchanged",
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+ "answer_mapping": {
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+ "0": "A",
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+ "1": "B",
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+ "2": "C",
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+ "3": "D"
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+ },
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+ "filter_stats": {
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+ "raw_train": 182822,
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+ "dropped_missing": 21953,
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+ "dropped_not_single_answer": 54499,
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+ "dropped_short_explanation": 21939,
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+ "dropped_duplicate_question": 28,
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+ "duplicate_question_groups": 28,
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+ "filtered": 84403,
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+ "dropped_duplicate_id": 0
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+ },
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+ "split_counts": {
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+ "filtered": 84403,
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+ "train": 20000,
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+ "mia_member": 2000,
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+ "mia_nonmember": 2000,
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+ "validation": 200,
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+ "unused": 62203
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+ },
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+ "verification": {
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+ "sizes": {
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+ "train": 20000,
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+ "mia_member": 2000,
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+ "mia_nonmember": 2000,
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+ "validation": 200
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+ },
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+ "normalized_question_overlaps": {
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+ "train_x_mia_nonmember": 0,
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+ "train_x_validation": 0,
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+ "mia_nonmember_x_validation": 0,
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+ "mia_member_x_mia_nonmember": 0,
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+ "mia_member_x_validation": 0
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+ },
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+ "member_subset_of_train": true,
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+ "unique_question_keys": {
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+ "train": 20000,
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+ "mia_member": 2000,
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+ "mia_nonmember": 2000,
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+ "validation": 200
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+ },
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+ "parquet_rows": 84403,
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+ "parquet_split_counts": {
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+ "train": 20000,
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+ "unused": 62203,
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+ "mia_nonmember": 2000,
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+ "validation": 200
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+ }
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+ },
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+ "files": {
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+ "medmcqa_filtered.parquet": {
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+ "path": "/home/luoh6/luoh4/LiSA/medmcqa_processed/medmcqa_filtered.parquet",
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+ "sha256": "87c3adeb51d3eae144ec229490855b3b9e92222dcd577efab575690466b4a868"
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+ "path": "/home/luoh6/luoh4/LiSA/medmcqa_processed/train_20000.jsonl",
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+ "path": "/home/luoh6/luoh4/LiSA/medmcqa_processed/mia_members_2000.jsonl",
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+ "sha256": "5eafbb71983b2ed58be5d200aab8add7acb735811b4e178b33db5eca1ca052ba"
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+ "mia_nonmembers_2000.jsonl": {
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+ "path": "/home/luoh6/luoh4/LiSA/medmcqa_processed/mia_nonmembers_2000.jsonl",
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+ "sha256": "dd7b600668e08fd439240b0de2699c0c10bba9d0d9d50501ed6610323b1bf7c9"
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+ }
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