HaomingLuo commited on
Commit
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1 Parent(s): 62cedc7

Make the material-memory example a lightweight reproducible starter

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Files changed (2) hide show
  1. MEMORY_EXAMPLE.md +17 -5
  2. show_material_memory.py +34 -17
MEMORY_EXAMPLE.md CHANGED
@@ -10,19 +10,30 @@ parameters cannot distinguish them.
10
  ## Run it
11
 
12
  ```sh
13
- pip install numpy h5py matplotlib huggingface_hub
14
  python show_material_memory.py
15
  ```
16
 
17
- Download [the script](show_material_memory.py) first. It fetches one pinned HDF5
18
- shard (not the entire dataset), checks its SHA-256, and produces a PNG, a CSV
19
  containing all 121 states, and a JSON evidence record. The figure displays
20
  states 0–60 so the two returns are easy to follow. No solver, GPU, model weights
21
  or paid service is required.
22
 
23
- Already have the data?
 
 
 
 
 
 
 
 
 
 
24
 
25
  ```sh
 
26
  python show_material_memory.py --shard data/t2_material_loading_memory_v1/shards/part-00002.h5
27
  ```
28
 
@@ -51,7 +62,8 @@ or stress of the opposite sign? Then inspect the CSV to trace how it got there.
51
  不足以确定此刻的应力,还需要加载历史或内部状态。
52
 
53
  这是合成材料点数据中的一个训练样本,不是实测数据,也不是 DENIM 的预测结果。
54
- 运行脚本即可生成图、完整历程表和校验记录。图中使用有符号等效应力;加载步
 
55
  不是实际时间。没有读取封存测试集,也没有修改训练、验证或测试划分。
56
 
57
  [Explore the interactive lab](https://lab.haoming-luo.com/material-memory/) ·
 
10
  ## Run it
11
 
12
  ```sh
13
+ pip install numpy matplotlib huggingface_hub
14
  python show_material_memory.py
15
  ```
16
 
17
+ Download [the script](show_material_memory.py) first. It fetches a **4.5 KB training
18
+ excerpt**, checks its SHA-256, and produces a PNG, a CSV
19
  containing all 121 states, and a JSON evidence record. The figure displays
20
  states 0–60 so the two returns are easy to follow. No solver, GPU, model weights
21
  or paid service is required.
22
 
23
+ The excerpt contains the four unchanged arrays used here, including the complete
24
+ strain tensors. It is a lossless copy from the pinned original shard, not a new
25
+ simulation or an extra dataset sample. Source provenance stays in the output.
26
+
27
+ For offline use, also download [the small excerpt](example/training-history-00252.npz):
28
+
29
+ ```sh
30
+ python show_material_memory.py --sample training-history-00252.npz
31
+ ```
32
+
33
+ Already have the original data? Install `h5py` to read its HDF5 shard:
34
 
35
  ```sh
36
+ pip install h5py
37
  python show_material_memory.py --shard data/t2_material_loading_memory_v1/shards/part-00002.h5
38
  ```
39
 
 
62
  不足以确定此刻的应力,还需要加载历史或内部状态。
63
 
64
  这是合成材料点数据中的一个训练样本,不是实测数据,也不是 DENIM 的预测结果。
65
+ 运行脚本只需下载 4.5 KB 的训练样本摘录,即可生成图、完整历程表和校验记录。
66
+ 摘录与原数据逐项一致,不新增样本。图中使用有符号等效应力;加载步
67
  不是实际时间。没有读取封存测试集,也没有修改训练、验证或测试划分。
68
 
69
  [Explore the interactive lab](https://lab.haoming-luo.com/material-memory/) ·
show_material_memory.py CHANGED
@@ -1,7 +1,7 @@
1
  #!/usr/bin/env python3
2
  """Show two zero-strain states with different stresses in published train data.
3
 
4
- Install: pip install numpy h5py matplotlib huggingface_hub
5
  Run: python show_material_memory.py
6
  Offline: python show_material_memory.py --shard /path/to/part-00002.h5
7
  Code: Apache-2.0; source data: CC BY 4.0, Haoming Luo / AgentFEM.
@@ -12,7 +12,6 @@ import hashlib
12
  import json
13
  from pathlib import Path
14
 
15
- import h5py
16
  import numpy as np
17
 
18
  REPO = "HaomingLuo/AgentFEM-Material-Loading-Memory"
@@ -20,20 +19,32 @@ REVISION = "cc9644aa5b51ac4f0ff5cccc9a42452de0d220a3"
20
  FILE = "data/t2_material_loading_memory_v1/shards/part-00002.h5"
21
  SHA256 = "952b90eed1ce3ac288487cf31180384fc12f79aa03d95e4885bfd73b85c9a46d"
22
  SAMPLE = "00252" # First training trajectory in the symmetric-cyclic J2 cohort.
 
 
 
 
 
23
 
24
 
25
- def read_sample(path):
26
  digest = hashlib.sha256(Path(path).read_bytes()).hexdigest()
27
- if digest != SHA256:
28
- raise ValueError("Shard checksum mismatch; use the pinned published file.")
29
- with h5py.File(path, "r") as f:
30
- g = f[SAMPLE]
31
- if str(g.attrs["split"]) != "train":
32
- raise ValueError("Illustration must use training data only.")
33
- arrays = {name: g[name][:] for name in (
34
- "total_strain", "signed_equivalent_strain",
35
- "signed_equivalent_stress_pa", "equivalent_plastic_strain")}
36
- case_id = str(g.attrs["case_id"])
 
 
 
 
 
 
 
37
  if not all(np.isfinite(a).all() for a in arrays.values()):
38
  raise ValueError("Non-finite trajectory.")
39
  # First two returns to zero after the virgin state, not maximum-gap selection.
@@ -49,16 +60,22 @@ def read_sample(path):
49
 
50
  def main():
51
  parser = argparse.ArgumentParser(description=__doc__)
52
- parser.add_argument("--shard", type=Path)
 
 
53
  parser.add_argument("--out", type=Path, default=Path("memory-example"))
54
  args = parser.parse_args()
55
- if args.shard is None:
56
  from huggingface_hub import hf_hub_download
57
- args.shard = Path(hf_hub_download(REPO, FILE, repo_type="dataset", revision=REVISION))
58
- d, a, b, case_id = read_sample(args.shard)
 
59
  strain = d["signed_equivalent_strain"] * 100
60
  stress = d["signed_equivalent_stress_pa"] / 1e6
61
  report = {"repository": REPO, "revision": REVISION, "shard_sha256": SHA256,
 
 
 
62
  "sample_id": SAMPLE, "case_id": case_id, "split": "train",
63
  "selection": "First two noninitial returns to zero strain; no interpolation",
64
  "states": [{"index": i, "signed_equivalent_strain": float(strain[i]/100),
 
1
  #!/usr/bin/env python3
2
  """Show two zero-strain states with different stresses in published train data.
3
 
4
+ Install: pip install numpy matplotlib huggingface_hub
5
  Run: python show_material_memory.py
6
  Offline: python show_material_memory.py --shard /path/to/part-00002.h5
7
  Code: Apache-2.0; source data: CC BY 4.0, Haoming Luo / AgentFEM.
 
12
  import json
13
  from pathlib import Path
14
 
 
15
  import numpy as np
16
 
17
  REPO = "HaomingLuo/AgentFEM-Material-Loading-Memory"
 
19
  FILE = "data/t2_material_loading_memory_v1/shards/part-00002.h5"
20
  SHA256 = "952b90eed1ce3ac288487cf31180384fc12f79aa03d95e4885bfd73b85c9a46d"
21
  SAMPLE = "00252" # First training trajectory in the symmetric-cyclic J2 cohort.
22
+ EXCERPT_REVISION = "62cedc709b159c9faa652e0aff34ff48771b3f07"
23
+ EXCERPT_FILE = "example/training-history-00252.npz"
24
+ EXCERPT_SHA256 = "c16bd5da346dd6926d32c730ad9ad040c5bd9a51dccba92b1f8c4ae1dce8717f"
25
+ ARRAY_NAMES = ("total_strain", "signed_equivalent_strain",
26
+ "signed_equivalent_stress_pa", "equivalent_plastic_strain")
27
 
28
 
29
+ def read_sample(path, excerpt=False):
30
  digest = hashlib.sha256(Path(path).read_bytes()).hexdigest()
31
+ if digest != (EXCERPT_SHA256 if excerpt else SHA256):
32
+ raise ValueError("Input checksum mismatch; use the pinned published file.")
33
+ if excerpt:
34
+ with np.load(path, allow_pickle=False) as packed:
35
+ if (str(packed["split"]) != "train" or str(packed["sample_id"]) != SAMPLE
36
+ or str(packed["source_sha256"]) != SHA256):
37
+ raise ValueError("Unexpected excerpt provenance.")
38
+ arrays = {name: packed[name] for name in ARRAY_NAMES}
39
+ case_id = str(packed["case_id"])
40
+ else:
41
+ import h5py # Only needed when inspecting the complete source shard.
42
+ with h5py.File(path, "r") as f:
43
+ g = f[SAMPLE]
44
+ if str(g.attrs["split"]) != "train":
45
+ raise ValueError("Illustration must use training data only.")
46
+ arrays = {name: g[name][:] for name in ARRAY_NAMES}
47
+ case_id = str(g.attrs["case_id"])
48
  if not all(np.isfinite(a).all() for a in arrays.values()):
49
  raise ValueError("Non-finite trajectory.")
50
  # First two returns to zero after the virgin state, not maximum-gap selection.
 
60
 
61
  def main():
62
  parser = argparse.ArgumentParser(description=__doc__)
63
+ inputs = parser.add_mutually_exclusive_group()
64
+ inputs.add_argument("--shard", type=Path, help="Original HDF5 shard (requires h5py)")
65
+ inputs.add_argument("--sample", type=Path, help="Local 4.5 KB NPZ training excerpt")
66
  parser.add_argument("--out", type=Path, default=Path("memory-example"))
67
  args = parser.parse_args()
68
+ if args.shard is None and args.sample is None:
69
  from huggingface_hub import hf_hub_download
70
+ args.sample = Path(hf_hub_download(REPO, EXCERPT_FILE, repo_type="dataset", revision=EXCERPT_REVISION))
71
+ using_excerpt = args.sample is not None
72
+ d, a, b, case_id = read_sample(args.sample if using_excerpt else args.shard, excerpt=using_excerpt)
73
  strain = d["signed_equivalent_strain"] * 100
74
  stress = d["signed_equivalent_stress_pa"] / 1e6
75
  report = {"repository": REPO, "revision": REVISION, "shard_sha256": SHA256,
76
+ "input_kind": "lossless_training_excerpt" if using_excerpt else "original_shard",
77
+ "input_sha256": EXCERPT_SHA256 if using_excerpt else SHA256,
78
+ "excerpt_revision": EXCERPT_REVISION if using_excerpt else None,
79
  "sample_id": SAMPLE, "case_id": case_id, "split": "train",
80
  "selection": "First two noninitial returns to zero strain; no interpolation",
81
  "states": [{"index": i, "signed_equivalent_strain": float(strain[i]/100),