HaomingLuo commited on
Commit
a32a979
·
verified ·
1 Parent(s): 07af0b5

Retain discarded branch seeds and complete reproducibility evidence

Browse files
SCHEMA.md CHANGED
@@ -60,6 +60,8 @@ resolution. The paper reference uses n=15,30,60,120 in validation.
60
  This is not a universal enumeration of every nonlinear equilibrium branch.
61
  - `seed_source`, `solver_trace`, `fallback_nfev`: numerical initialization,
62
  residual/step evidence, optional root-solver work count.
 
 
63
  - `previous_id`, `continuous_stable_pair`: adjacent accepted stable samples with
64
  max angle-DOF change<0.2 rad. This heuristic does NOT certify the unsampled
65
  interval or prove reachability from the unloaded state.
 
60
  This is not a universal enumeration of every nonlinear equilibrium branch.
61
  - `seed_source`, `solver_trace`, `fallback_nfev`: numerical initialization,
62
  residual/step evidence, optional root-solver work count.
63
+ Discarded wrong-branch/failed seed candidates are separately retained in
64
+ validation/discarded_seed_attempts.jsonl.gz, not counted as accepted data.
65
  - `previous_id`, `continuous_stable_pair`: adjacent accepted stable samples with
66
  max angle-DOF change<0.2 rad. This heuristic does NOT certify the unsampled
67
  interval or prove reachability from the unloaded state.
SHA256SUMS.json CHANGED
@@ -2,7 +2,7 @@
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  "LICENSE-DATA": "6717316458f84621b0f3f1201d7099d8df9fd9545b50c302b120c342833d0094",
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  "README.md": "a7b9aa8f31be88c2261cf35b7d06dfff543aa6fa6e250942e80e16a7e249ac79",
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- "SCHEMA.md": "6c85472623acf231c460ece0b03288fd4b04558ef089a654c35108fcc97ae098",
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  "assets/overview.png": "844ed9eef3ca4f32b13513bfe21de96f27d4ef5113a07bad7117556d15d9fa52",
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  "cases/fig9/agentfem.toml": "97f65c98b01ed94ebd331cdc4be2f5d76db8dcefbcc9aa0ffbd1589fd82af6d9",
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  "cases/fig9/case.py": "51684e93a66cd75ca9e688dd2210b1252c16d439763ba60de0f7d533e82311fa",
@@ -23,23 +23,24 @@
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  "reports/additional_baselines.json": "7184e6e33f23dd9cd73da4e35131d7e4ac2906627932b62eea1ae8b1c3482bf9",
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  "reports/baselines.json": "32b6297c11b6a5e1134222b4e88bba5edca922940bb895cd89b1cf97044a2e81",
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  "reports/environment.json": "0f80f1c3fb99529e87e892c5d418ee7def8b72695d14fa325809d35904eeb9e1",
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- "reports/generation.json": "1343aff2e6b4e2e46fbb15e50159084671a9dbba7718f92807088b599d88041a",
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  "reports/inverse_checks.json": "1e4714f41a076aef394cdcfb60965546c72852f57ff8b423f3e8b1fc9704eaa7",
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  "reports/validation.json": "77ba910278c57771a3944eb81e2df17b262fe6e903e37f412c171f9a73755fe7",
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  "requirements.txt": "109b4a8df3c120bd4301525eab1bd89f974e95291aeb1c441b4c3c8db5edb098",
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- "src/generate.py": "2d7b2866400386f3e0d73e796f534b6aed8e493a7e6c646b71ade698fe82a00b",
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  "src/inference.py": "b07695dcfaaa90493a2efafc6944b2e708a48a8c16dc27b497218c59b9b7598a",
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  "src/inverse.py": "6e34886daf04dfefbcd241060c91505006704c3aaf9edeca9fa38f66d35242dc",
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- "src/package.py": "1fd297836c20bcfd9cc51f4b2ed62204b8de9027f5dd33fcd3075d6548ae53b8",
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  "src/rod.py": "4011c7f72047d0de9da63f18187abf818ed49c711ebe349c1b285e763ddad12a",
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  "src/train.py": "57090fde92cc3e80e28f54856534817bb447708d1095d82a33f6c13492741be2",
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- "states/parameter_ood.jsonl.gz": "7795bd454c08eaaf2c93a86e54a60354337bf3e52a94c8c91d039b82811d631a",
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- "states/test.jsonl.gz": "ce1c3a1bfa3d141ee188041664e8043f611fd218612e609aa8ec090f14bae379",
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- "states/train.jsonl.gz": "60ce6d411294a8bcffe96cd893a66b8b5eb539c2cdef3fad6fa2a1a3fc55d537",
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- "states/validation.jsonl.gz": "235cf1d9221fc6ffa31e20ca186ab15db2cf06ca8d575c4157eeead88b3f9f10",
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  "tests/check_paraview.py": "3575e185754a68aa3482537dd750cb6cbc280f26dc6eb41375bc8ce2931c4fa6",
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  "tests/evaluate_release.py": "657e5d01c8246a1c140bbdf8b7dcdf1c1f94fe09df71163f076e3846b5f7b973",
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  "tests/validate.py": "12ac0c9f9ff841142bb79e5eb53af1cde1d699ae259d723bb568725d7c4b7fa1",
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- "validation/paired_resolution.jsonl.gz": "68a217ba0ad15b5a6bc5119b61577eddd7e6126f6edd2fa6acbb3d07d50615cd",
 
44
  "validation/rejected_attempts.json": "37517e5f3dc66819f61f5a7bb8ace1921282415f10551d2defa5c3eb0985b570"
45
  }
 
2
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  "README.md": "a7b9aa8f31be88c2261cf35b7d06dfff543aa6fa6e250942e80e16a7e249ac79",
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  "validation/rejected_attempts.json": "37517e5f3dc66819f61f5a7bb8ace1921282415f10551d2defa5c3eb0985b570"
46
  }
reports/generation.json CHANGED
@@ -2,10 +2,11 @@
2
  "version": "0.1.0",
3
  "seed": 20261014,
4
  "accepted_states": 16200,
5
- "rejected_attempts": 0,
 
6
  "scenes": 216,
7
  "paired_resolution_cases": 216,
8
- "seconds": 7.868317000102252,
9
  "splits": {
10
  "train": 9450,
11
  "validation": 2025,
 
2
  "version": "0.1.0",
3
  "seed": 20261014,
4
  "accepted_states": 16200,
5
+ "rejected_final_states": 0,
6
+ "discarded_seed_attempts": 22,
7
  "scenes": 216,
8
  "paired_resolution_cases": 216,
9
+ "seconds": 10.013067834079266,
10
  "splits": {
11
  "train": 9450,
12
  "validation": 2025,
src/generate.py CHANGED
@@ -9,7 +9,7 @@ ROOT=Path(__file__).resolve().parents[1]
9
 
10
  def generate():
11
  rng=np.random.default_rng(20261014)
12
- r=Rod(48); records=[]; rejected=[]; audits=[]
13
  start=time.perf_counter()
14
  # Each family has 60 ID scenes and 12 parameter-OOD scenes; all paths and
15
  # mirrored branches of a scene share a single split.
@@ -52,6 +52,7 @@ def generate():
52
  result=r.solve(c,seed)
53
  if family=='microforce' and path!='straight' and (result['tip'][1]*sign<1e-4 or not result['accepted']):
54
  for amp in [.6,1.6,2.5,3.]:
 
55
  result=r.solve(c,r.mode_seed(sign*amp));seed_source='signed_mode_retry'
56
  if result['accepted'] and result['tip'][1]*sign>1e-4:break
57
  valid=result['accepted']
@@ -75,10 +76,10 @@ def generate():
75
  fine=serial(f),centerline_rmse=float(np.sqrt(np.mean(np.sum((f['centerline']-prev['centerline'])**2,axis=1))))))
76
  if j%12==0:print(f'{family} {j}/72: accepted={len(records)} rejected={len(rejected)}',flush=True)
77
  out=ROOT/'data';out.mkdir(exist_ok=True)
78
- for name,rows in [('equilibria',records),('rejected_attempts',rejected),('paired_resolution',audits)]:
79
  with (out/f'{name}.jsonl').open('w') as f:
80
  for row in rows:f.write(json.dumps(row,allow_nan=False,separators=(',',':'))+'\n')
81
- summary=dict(version='0.1.0',seed=20261014,accepted_states=len(records),rejected_attempts=len(rejected),scenes=216,
82
  paired_resolution_cases=len(audits),seconds=time.perf_counter()-start,
83
  splits={s:sum(v['split']==s for v in records) for s in ['train','validation','test','parameter_ood']},
84
  families={s:sum(v['family']==s for v in records) for s in ['end_load','intrinsic_curvature','microforce']},
 
9
 
10
  def generate():
11
  rng=np.random.default_rng(20261014)
12
+ r=Rod(48); records=[]; rejected=[]; audits=[]; discarded=[]
13
  start=time.perf_counter()
14
  # Each family has 60 ID scenes and 12 parameter-OOD scenes; all paths and
15
  # mirrored branches of a scene share a single split.
 
52
  result=r.solve(c,seed)
53
  if family=='microforce' and path!='straight' and (result['tip'][1]*sign<1e-4 or not result['accepted']):
54
  for amp in [.6,1.6,2.5,3.]:
55
+ discarded.append(dict(id=f'{scene}_{path}_{step:02d}',scene_id=scene,split=split,controls=asdict(c),reason='wrong_branch_or_not_converged',**serial(result)))
56
  result=r.solve(c,r.mode_seed(sign*amp));seed_source='signed_mode_retry'
57
  if result['accepted'] and result['tip'][1]*sign>1e-4:break
58
  valid=result['accepted']
 
76
  fine=serial(f),centerline_rmse=float(np.sqrt(np.mean(np.sum((f['centerline']-prev['centerline'])**2,axis=1))))))
77
  if j%12==0:print(f'{family} {j}/72: accepted={len(records)} rejected={len(rejected)}',flush=True)
78
  out=ROOT/'data';out.mkdir(exist_ok=True)
79
+ for name,rows in [('equilibria',records),('rejected_attempts',rejected),('discarded_seed_attempts',discarded),('paired_resolution',audits)]:
80
  with (out/f'{name}.jsonl').open('w') as f:
81
  for row in rows:f.write(json.dumps(row,allow_nan=False,separators=(',',':'))+'\n')
82
+ summary=dict(version='0.1.0',seed=20261014,accepted_states=len(records),rejected_final_states=len(rejected),discarded_seed_attempts=len(discarded),scenes=216,
83
  paired_resolution_cases=len(audits),seconds=time.perf_counter()-start,
84
  splits={s:sum(v['split']==s for v in records) for s in ['train','validation','test','parameter_ood']},
85
  families={s:sum(v['family']==s for v in records) for s in ['end_load','intrinsic_curvature','microforce']},
src/package.py CHANGED
@@ -24,6 +24,7 @@ def main():
24
  (dataset/'validation').mkdir(exist_ok=True)
25
  with gzip.open(dataset/'validation/paired_resolution.jsonl.gz','wt') as f:f.write((R/'data/paired_resolution.jsonl').read_text())
26
  (dataset/'validation/rejected_attempts.json').write_text('[]\n')
 
27
  native=R/'cases/fig9/outputs/003-downward-single-geometry'
28
  for folder in ['paraview','xdmf','scientific','figures']:
29
  shutil.copytree(native/folder,dataset/'native_fe'/folder,dirs_exist_ok=True)
 
24
  (dataset/'validation').mkdir(exist_ok=True)
25
  with gzip.open(dataset/'validation/paired_resolution.jsonl.gz','wt') as f:f.write((R/'data/paired_resolution.jsonl').read_text())
26
  (dataset/'validation/rejected_attempts.json').write_text('[]\n')
27
+ with gzip.open(dataset/'validation/discarded_seed_attempts.jsonl.gz','wt') as f:f.write((R/'data/discarded_seed_attempts.jsonl').read_text())
28
  native=R/'cases/fig9/outputs/003-downward-single-geometry'
29
  for folder in ['paraview','xdmf','scientific','figures']:
30
  shutil.copytree(native/folder,dataset/'native_fe'/folder,dirs_exist_ok=True)
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