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Align task taxonomy and IDs with the updated paper; main evaluation 306
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#!/usr/bin/env python3
from __future__ import annotations
import csv
import hashlib
import math
import re
import subprocess
from pathlib import Path
ROOT = Path("/home/user/Desktop")
CASE = ROOT / "cylinder_snappy"
STL_SHA256 = "e5901f31b9024d86c25ca7c508193dfefeb300b24c008cb15d3010412ad3d54e"
def read(path: Path) -> str:
return path.read_text(encoding="utf-8", errors="ignore")
def named_block(text: str, name: str) -> str:
text = re.sub(r"/\*.*?\*/|//[^\n]*", "", text, flags=re.S)
match = re.search(rf"(?m)^\s*{re.escape(name)}\s*\{{", text)
if not match:
raise ValueError(f"missing block {name}")
start = text.find("{", match.start())
depth = 0
for index in range(start, len(text)):
depth += text[index] == "{"
depth -= text[index] == "}"
if depth == 0:
return text[start + 1 : index]
raise ValueError(f"unterminated block {name}")
def has_entry(block: str, key: str, value: str) -> bool:
return re.search(rf"(?<!\w){re.escape(key)}\s+{value}\s*;", block) is not None
def close(actual: float, expected: float, tolerance: float) -> bool:
return math.isfinite(actual) and abs(actual - expected) <= tolerance
def patch(text: str, name: str) -> str:
return named_block(named_block(text, "boundaryField"), name)
def latest_time() -> Path:
times = [
path
for path in CASE.iterdir()
if path.is_dir() and re.fullmatch(r"\d+(?:\.\d+)?", path.name) and float(path.name) > 0
]
if not times:
raise FileNotFoundError("no computed time directory")
return max(times, key=lambda path: float(path.name))
def field(path: Path, kind: str) -> list:
text = read(path)
header = named_block(text, "FoamFile")
match = re.search(
rf"internalField\s+nonuniform\s+List<{kind}>\s+(\d+)\s*\((.*?)\)\s*;",
text,
re.S,
)
if not match:
raise ValueError(f"missing nonuniform {kind} field")
if kind == "vector":
values = [
tuple(float(value) for value in item.split())
for item in re.findall(r"\(([^()]+)\)", match.group(2))
]
valid = all(
len(value) == 3 and all(math.isfinite(component) for component in value)
for value in values
)
else:
values = [float(value) for value in match.group(2).split()]
valid = all(math.isfinite(value) for value in values)
if (
len(values) != int(match.group(1))
or not valid
or not has_entry(header, "format", r"ascii")
or not has_entry(header, "class", rf"vol{kind.capitalize()}Field")
or not has_entry(header, "object", re.escape(path.name))
):
raise ValueError(f"invalid {kind} field")
return values
def paren_section(text: str, name: str) -> str:
match = re.search(rf"(?m)^\s*{re.escape(name)}\s*\(", text)
if not match:
raise ValueError(f"missing section {name}")
start = text.find("(", match.start())
depth = 0
for index in range(start, len(text)):
depth += text[index] == "("
depth -= text[index] == ")"
if depth == 0:
return text[start + 1 : index]
raise ValueError(f"unterminated section {name}")
def numeric_entry(text: str, key: str) -> float:
match = re.search(rf"(?<!\w){re.escape(key)}\s+([^;]+);", text)
if not match:
raise ValueError(f"missing entry {key}")
return float(match.group(1))
def dimensioned_value(text: str, key: str) -> float:
match = re.search(rf"(?m)^\s*{re.escape(key)}\s+\[[^]]+\]\s+([^;]+);", text)
if not match:
raise ValueError(f"missing dimensioned entry {key}")
return float(match.group(1))
def tuple_entry(text: str, key: str, uniform: bool = False) -> tuple[float, ...]:
prefix = r"uniform\s+" if uniform else ""
match = re.search(rf"(?m)^\s*{re.escape(key)}\s+{prefix}\(([^()]+)\)\s*;", text)
if not match:
raise ValueError(f"missing tuple entry {key}")
return tuple(float(value) for value in match.group(1).split())
def vector_entry(text: str, key: str, uniform: bool = False) -> tuple[float, float, float]:
values = tuple_entry(text, key, uniform)
if len(values) != 3:
raise ValueError(f"invalid vector entry {key}")
return values
def uniform_scalar(text: str) -> float:
match = re.search(r"\binternalField\s+uniform\s+([^;]+);", text)
if not match:
raise ValueError("missing uniform scalar field")
return float(match.group(1))
def uniform_vector(text: str) -> tuple[float, float, float]:
match = re.search(r"\binternalField\s+uniform\s+\(([^()]+)\)\s*;", text)
if not match:
raise ValueError("missing uniform vector field")
values = tuple(float(value) for value in match.group(1).split())
if len(values) != 3:
raise ValueError("invalid uniform vector field")
return values
def mesh_geometry_is_valid(mesh: str) -> bool:
scale_match = re.search(r"\bconvertToMeters\s+([^;]+);", mesh)
vertices = [
tuple(float(value) for value in item.split())
for item in re.findall(r"\(([^()]+)\)", paren_section(mesh, "vertices"))
]
if scale_match is None or len(vertices) != 8 or any(len(point) != 3 for point in vertices):
return False
scale = float(scale_match.group(1))
xs, ys, zs = zip(*(tuple(scale * value for value in point) for point in vertices))
return (
abs(min(xs)) <= 1e-12
and abs(max(xs) - 2.0) <= 1e-12
and abs(min(ys)) <= 1e-12
and abs(max(ys) - 1.0) <= 1e-12
and abs(min(zs) + 0.005) <= 1e-12
and abs(max(zs) - 0.005) <= 1e-12
and re.search(r"hex\s*\([^)]*\)\s*\(\s*160\s+80\s+1\s*\)", mesh) is not None
)
def log_finished(path: Path) -> bool:
text = read(path)
return "FOAM FATAL" not in text and text.rstrip().endswith("End")
def patch_values(path: Path, patch: str) -> list[float]:
text = read(path)
header = named_block(text, "FoamFile")
block = re.search(rf"\b{re.escape(patch)}\s*\{{(.*?)\n\s*\}}", text, re.S)
if not block:
raise ValueError(f"missing {patch} boundary field")
values = re.search(
r"value\s+nonuniform\s+List<scalar>\s+(\d+)\s*\((.*?)\)\s*;",
block.group(1),
re.S,
)
if not values:
raise ValueError(f"missing nonuniform values on {patch}")
result = [float(value) for value in values.group(2).split()]
if (
len(result) != int(values.group(1))
or not has_entry(header, "format", r"ascii")
or not has_entry(header, "class", r"volScalarField")
or not has_entry(header, "object", re.escape(path.name))
):
raise ValueError("boundary face-count mismatch")
return result
def cylinder_faces() -> int:
boundary = read(CASE / "constant/polyMesh/boundary")
block = re.search(r"\bcylinder\s*\{(.*?)\n\s*\}", boundary, re.S)
if not block:
raise ValueError("missing cylinder mesh patch")
match = re.search(r"\bnFaces\s+(\d+)\s*;", block.group(1))
if not match:
raise ValueError("missing cylinder face count")
return int(match.group(1))
def check_case() -> bool:
stl = CASE / "constant/triSurface/cylinder.stl"
if hashlib.sha256(stl.read_bytes()).hexdigest() != STL_SHA256:
return False
mesh = read(CASE / "system/blockMeshDict")
snappy = read(CASE / "system/snappyHexMeshDict")
velocity = read(CASE / "0/U")
kinetic = read(CASE / "0/k")
dissipation = read(CASE / "0/epsilon")
physical = read(CASE / "constant/physicalProperties")
momentum = read(CASE / "constant/momentumTransport")
control = read(CASE / "system/controlDict")
pressure = read(CASE / "0/p")
nut = read(CASE / "0/nut")
geometry = named_block(snappy, "geometry")
surface = named_block(geometry, "cylinder")
return all(
(
mesh_geometry_is_valid(mesh),
has_entry(snappy, "castellatedMesh", r"true"),
has_entry(snappy, "snap", r"true"),
has_entry(snappy, "addLayers", r"true"),
has_entry(surface, "type", r"triSurfaceMesh"),
has_entry(surface, "file", r'"cylinder\.stl"'),
"transform" not in surface,
not re.search(r"(?m)^\s*scale\s+", surface) or abs(numeric_entry(surface, "scale") - 1.0) <= 1e-12,
tuple_entry(snappy, "level") == (2.0, 3.0),
vector_entry(snappy, "locationInMesh") == (0.1, 0.5, 0.0),
abs(numeric_entry(snappy, "nSurfaceLayers") - 3.0) <= 1e-12,
abs(numeric_entry(snappy, "expansionRatio") - 1.2) <= 1e-12,
abs(numeric_entry(snappy, "finalLayerThickness") - 0.4) <= 1e-12,
uniform_vector(velocity) == (3.0, 0.0, 0.0),
abs(uniform_scalar(kinetic) - 0.03375) <= 1e-12,
abs(uniform_scalar(dissipation) - 0.1458) <= 1e-12,
has_entry(patch(velocity, "inlet"), "value", r"uniform\s+\(3(?:\.0+)?\s+0(?:\.0+)?\s+0(?:\.0+)?\)"),
has_entry(patch(velocity, "outlet"), "type", r"zeroGradient"),
has_entry(patch(velocity, "cylinder"), "type", r"noSlip"),
all(has_entry(patch(velocity, name), "type", r"symmetry") for name in ("topBottom", "frontAndBack")),
has_entry(patch(pressure, "outlet"), "type", r"fixedValue"),
has_entry(patch(pressure, "outlet"), "value", r"uniform\s+0(?:\.0+)?"),
has_entry(patch(kinetic, "cylinder"), "type", r"kqRWallFunction"),
has_entry(patch(dissipation, "cylinder"), "type", r"epsilonWallFunction"),
has_entry(patch(nut, "cylinder"), "type", r"nutkWallFunction"),
abs(dimensioned_value(physical, "nu") - 1e-6) <= 1e-15,
"simulationType RAS;" in momentum,
"model realizableKE;" in momentum,
abs(numeric_entry(control, "endTime") - 500.0) <= 1e-12,
"type yPlus;" in control,
)
)
def check() -> bool:
final = latest_time()
required = (
ROOT / "build_case.py",
ROOT / "postprocess.py",
ROOT / "summary.txt",
ROOT / "yplus_surface.csv",
CASE / "log.surfaceFeatures",
CASE / "log.blockMesh",
CASE / "log.snappyHexMesh",
CASE / "log.checkMesh",
CASE / "log.simpleFoam",
final / "U",
final / "p",
final / "k",
final / "epsilon",
final / "nut",
final / "yPlus",
)
if any(not path.is_file() or path.stat().st_size == 0 for path in required):
return False
if abs(float(final.name) - 500.0) > 1e-12:
return False
mesh_log = read(CASE / "log.checkMesh")
snappy_log = read(CASE / "log.snappyHexMesh")
solve_log = read(CASE / "log.simpleFoam")
if not (
all(log_finished(path) for path in required[4:9])
and "Mesh OK." in mesh_log
and "Layer mesh :" in snappy_log
and "Time = 500" in solve_log
):
return False
mesh_check = subprocess.run(
[
"bash",
"--noprofile",
"--norc",
"-c",
"trap - CHLD; . /opt/openfoam11/etc/bashrc && checkMesh -case /home/user/Desktop/cylinder_snappy",
],
stdout=subprocess.PIPE,
stderr=subprocess.STDOUT,
text=True,
timeout=120,
)
if mesh_check.returncode != 0 or "Mesh OK." not in mesh_check.stdout or not check_case():
return False
cells = len(field(final / "U", "vector"))
if cells <= 12800 or any(
len(field(final / name, "scalar")) != cells
for name in ("p", "k", "epsilon", "nut")
):
return False
values = patch_values(final / "yPlus", "cylinder")
faces = cylinder_faces()
if faces <= 0 or len(values) != faces:
return False
average = sum(values) / len(values)
if not (all(math.isfinite(value) and value >= 0 for value in values) and 20.0 < average < 80.0):
return False
with (ROOT / "yplus_surface.csv").open(encoding="utf-8", newline="") as stream:
rows = list(csv.DictReader(stream))
if len(rows) != len(values) or set(rows[0]) != {"face_index", "yplus"}:
return False
for index, (row, expected) in enumerate(zip(rows, values)):
if int(row["face_index"]) != index or not close(float(row["yplus"]), expected, 5.0e-7):
return False
lines = [line.strip() for line in read(ROOT / "summary.txt").splitlines() if line.strip()]
if len(lines) != 1:
return False
reported = float(lines[0])
return math.isfinite(reported) and abs(reported - average) <= 5.0e-7
def main() -> int:
try:
result = check()
except Exception:
result = False
print("True" if result else "False")
return 0
if __name__ == "__main__":
raise SystemExit(main())