rem stringlengths 1 226k | add stringlengths 0 227k | context stringlengths 6 326k | meta stringlengths 143 403 | input_ids listlengths 256 256 | attention_mask listlengths 256 256 | labels listlengths 128 128 |
|---|---|---|---|---|---|---|
synchronized (queueHandlerLock) { if (! isQueueHandlerStarted ) { getQueueHandler().start(); isQueueHandlerStarted = true; } else { System.err.println( "QueueHandler in " + getAgentIdentifier() + " asked to restart."); } } | synchronized (queueHandlerLock) { if (! isQueueHandlerStarted ) { getQueueHandler().start(); isQueueHandlerStarted = true; } else { System.err.println( "QueueHandler in " + getAgentIdentifier() + " asked to restart."); } } | private void startQueueHandler() { synchronized (queueHandlerLock) { if (! isQueueHandlerStarted ) { getQueueHandler().start(); isQueueHandlerStarted = true; } else { System.err.println( "QueueHandler in " + getAgentIdentifier() + " asked to restart."); } } } | 7981 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/7981/58e8bb8b6b85c3ba06f165be059c1b105683d23c/SimpleAgent.java/buggy/core/src/org/cougaar/core/agent/SimpleAgent.java | [
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public void ruleAction(int ruleNumber) { if (bad_rule != 0) return; switch (ruleNumber) { // // Rule 1: identifier ::= IDENTIFIER // case 1: { if (prsStream.getKind(btParser.getToken(1)) != X10Parsersym.TK_IDENTIFIER && (Re... | 1769 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/1769/4b2801ac2ab00275efc7eb5f3257db525f56ab9d/X10Parser.java/clean/x10.compiler/src/x10/parser/X10Parser.java | [
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Location loc = f.getLocation(); | Location loc = f.getLocation(); | protected void renderBead(final Graphics2D g2, final Feature f, final SequenceRenderContext context) { Location loc = f.getLocation(); int min = loc.getMin(); int max = loc.getMax(); int dif = max - min; if (context.getDirection() == context.HORIZONTAL) { double posX... | 50397 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/50397/3d7c8d7f908007358765695ed6c9864bda72f0ea/RectangularBeadRenderer.java/buggy/src/org/biojava/bio/gui/sequence/RectangularBeadRenderer.java | [
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} | } | public synchronized Vector publishProject(CmsRequestContext context, CmsProject onlineProject, boolean backupEnabled, int backupTagId, I_CmsReport report, Hashtable exportpoints, CmsResource directPublishResource, int maxVersions) throws CmsException { CmsExportPointDriver discAccess = null; CmsFolder... | 8585 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/8585/d8608fec2baa999d66e14e04cc11363ba207f04a/CmsProjectDriver.java/buggy/src/org/opencms/db/generic/CmsProjectDriver.java | [
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String attrPrefix = null; if (attr.getLocalName() == null) throw new SAXException("[NamespaceNormalizingDOMStreamer] Encountered an attribute '"+attrName+"' without a local name, on node '"+nodeName+"'. This DOM streamer does not support DOM 1 attributes."); | String assignedAttrPrefix = null; | protected void startNode(Node node) throws SAXException { switch (node.getNodeType()) { case Node.COMMENT_NODE: { if (lexicalHandler != null) { String data = ((Comment) node).getData(); lexi... | 46428 /local/tlutelli/issta_data/temp/all_java4context/java/2006_temp/2006/46428/edc18a0ad05bf3612a251ffae128935e73886b5c/DOMStreamer.java/buggy/src/java/org/apache/cocoon/xml/dom/DOMStreamer.java | [
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protected void firePropertyChange(String property, Object oldValue, Object newValue) { Class listenerClass = java.beans.PropertyChangeListener.class; Object[] listenerList = listeners.getListeners(listenerClass); for(int i = 0; i < listenerList.length; i++) { PropertyChangeListener l = (PropertyChangeListener)listenerL... | void firePropertyChange(String property, Object oldValue, Object newValue) { Object[] array = listeners; if (array != null) { firePropertyChangeImpl(array, property, oldValue, newValue); } | protected void firePropertyChange(String property, Object oldValue, Object newValue) { Class listenerClass = java.beans.PropertyChangeListener.class; Object[] listenerList = listeners.getListeners(listenerClass); for(int i = 0; i < listenerList.l... | 19000 /local/tlutelli/issta_data/temp/all_java1context/java/2006_temp/2006/19000/81ae8747740fe18459d2015164e4c0e8b6ed5dbb/Context.java/clean/src/org/mozilla/javascript/Context.java | [
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List nodes = preferenceManager .getElements(PreferenceManager.POST_ORDER); for (Iterator i = nodes.iterator(); i.hasNext();) { IPreferenceNode node = (IPreferenceNode) i.next(); if (node.getId().equals(nodeId)) return node; } return null; } | List nodes = preferenceManager .getElements(PreferenceManager.POST_ORDER); for (Iterator i = nodes.iterator(); i.hasNext();) { IPreferenceNode node = (IPreferenceNode) i.next(); if (node.getId().equals(nodeId)) return node; } return null; } | protected IPreferenceNode findNodeMatching(String nodeId) { List nodes = preferenceManager .getElements(PreferenceManager.POST_ORDER); for (Iterator i = nodes.iterator(); i.hasNext();) { IPreferenceNode node = (IPreferenceNode) i.next(); if (node.getId().equals(nod... | 55805 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/55805/d6d458c4d729d92f70d2e5d4166fe0c3ff50c883/PreferenceDialog.java/clean/bundles/org.eclipse.jface/src/org/eclipse/jface/preference/PreferenceDialog.java | [
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typeAndRun('\t'); | type('\t'); | public void testExitOnTab() throws BadLocationException, JavaModelException, CoreException { use14(); setCaret(BODY_OFFSET); type('('); type('('); type('('); type('('); typeAndRun('\t'); assertEquals("(((())))", fDocument.get(BODY_OFFSET, 8)); assertEquals(BODY_OFFSET + 5, getCaret()); LinkedModeModel mode... | 9698 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/9698/376240f96b8d520e0b161b6f94801361283f351a/BracketInserterTest.java/clean/org.eclipse.jdt.text.tests/src/org/eclipse/jdt/text/tests/BracketInserterTest.java | [
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public PipedInputStream() { buffer = new byte[PIPE_SIZE]; } | PipedInputStream() { return; } | public PipedInputStream() { buffer = new byte[PIPE_SIZE]; } | 45163 /local/tlutelli/issta_data/temp/all_java4context/java/2006_temp/2006/45163/8d285042d388a7105e3b50a5f438a5cd5ecdb499/PipedInputStream.java/buggy/libjava/java/io/PipedInputStream.java | [
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Variant variant = new Variant(true); auto.setProperty(RegisterAsBrowser, variant); variant.dispose(); | public Browser(Composite parent, int style) { super(parent, style &~ SWT.BORDER); info = Browser.DOCHOSTUIFLAG_THEME; if ((style & SWT.BORDER) == 0) info |= Browser.DOCHOSTUIFLAG_NO3DOUTERBORDER; frame = new OleFrame(this, SWT.NONE); try { site = new WebSite(frame, SWT.NONE, "Shell.Explorer"); //$NON-NLS-1$ } catch (S... | 12413 /local/tlutelli/issta_data/temp/all_java1context/java/2006_temp/2006/12413/40db15170a2341925dc6e99e6110c2cce7e031e1/Browser.java/buggy/bundles/org.eclipse.swt/Eclipse SWT Browser/win32/org/eclipse/swt/browser/Browser.java | [
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target.setType( (java.lang.String) value); | target.setTransient( ((Boolean)value).booleanValue()); | public void setValue( Object object, Object value) throws IllegalStateException, IllegalArgumentException { try { FieldMapping target = (FieldMapping) object; target.setType( (java.lang.String) value); } ... | 3614 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/3614/f21979d3e63f8be8d1ac204f745c2944078dbf5f/FieldMappingDescriptor.java/clean/trunk/castor-2002/castor/src/main/org/exolab/castor/mapping/xml/FieldMappingDescriptor.java | [
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this.outStream = new BufferedOutputStream(new FileOutputStream(file, append)); | this.outStream = new BufferedOutputStream(new FileOutputStream(file.getAbsolutePath(), append)); | protected void openInternal(String path, String mode) { this.path = path; setMode(mode); File file = new File(path); try { if (isReadable()) { this.inStream = new RubyInputStream(new BufferedInputStream(new FileInputStream(file))); }... | 45827 /local/tlutelli/issta_data/temp/all_java4context/java/2006_temp/2006/45827/263d8797aa5be7bc604097d1d483cf474b827c91/RubyFile.java/buggy/org/jruby/RubyFile.java | [
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throw createSSLException(exc); | public static SSLSocketFactory createSSLSocketFactory(SSLTrustManager[] tm) throws SSLException, SSLNotSupportedException { try { return createJava14SSLSocketFactory(tm); } catch (ClassNotFoundException cnfe) { // try JSSE after try/catch block } catch (NoSuchMethodException nsme) { // try JSSE after try/cat... | 47437 /local/tlutelli/issta_data/temp/all_java4context/java/2006_temp/2006/47437/7d288df826331ee38d037e04a038fabc414be21b/SSLSocketFactoryFactory.java/buggy/src/org/schwering/irc/lib/ssl/SSLSocketFactoryFactory.java | [
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((Double) value).doubleValue(), (double) 321.0, (double) 0.005); | ((Double) value).doubleValue(), 321.0, 0.005); | public void testGetSimpleDouble() { try { Object value = PropertyUtils.getSimpleProperty(bean, "doubleProperty"); assertNotNull("Got a value", value); assertTrue("Got correct type", (value instanceof Double)); assertEqu... | 54521 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/54521/563cb810bc92fd1ec7cc4af1bcde00af99056757/DynaPropertyUtilsTestCase.java/clean/src/test/org/apache/commons/beanutils/DynaPropertyUtilsTestCase.java | [
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public void testLessThan() throws Exception { final DeweyDecimal dd1 = new DeweyDecimal( DD1 ); final DeweyDecimal dd2 = new DeweyDecimal( DD2 ); final DeweyDecimal dd3 = new DeweyDecimal( DD3 ); final DeweyDecimal dd4 = new DeweyDecimal( DD4 ); final DeweyDecimal dd5 = ... | 2044 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/2044/e622ff134f94da7c133006a05d0aab68115a1013/DeweyDecimalTestCase.java/buggy/loom/support/extension/src/test/org/realityforge/extension/DeweyDecimalTestCase.java | [
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case Icode_NAME_FAST_THIS : | case Icode_NAME_FAST_THIS : | static Object interpret(Context cx, Scriptable scope, Scriptable thisObj, Object[] args, double[] argsDbl, int argShift, int argCount, NativeFunction fnOrScript, InterpreterData idata) throws JavaScrip... | 47609 /local/tlutelli/issta_data/temp/all_java4context/java/2006_temp/2006/47609/5b81311a845598f1a18a6f94fb54470e92728630/Interpreter.java/clean/js/rhino/src/org/mozilla/javascript/Interpreter.java | [
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if (vars.get(name) != null) { | if (vars.getVariable(name) != null) { | public Node transform(Node tree, Node enclosing, TokenStream ts, Scriptable scope) { loops = new Stack(); loopEnds = new Stack(); inFunction = tree.getType() == TokenStream.FUNCTION; if (!inFunction) { addVariables(tree, getVariableTable(tree)); ... | 19042 /local/tlutelli/issta_data/temp/all_java1context/java/2006_temp/2006/19042/3eb542db2c80d7521ea272c802d999a32072bfb6/NodeTransformer.java/buggy/src/org/mozilla/javascript/NodeTransformer.java | [
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inline_block.floated = true; | public static InlineBox generateFloatedBlockInlineBox(Context c, Content content, int avail, LineBox curr_line) { //Uu.p("generate floated block inline box: avail = " + avail); //Uu.p("generate floated block inline box"); Rectangle oe = c.getExtents();// copy the extents for safety c.set... | 8125 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/8125/d78edbe00854320b48eb4ef97095b253df533dd8/FloatUtil.java/clean/src/java/org/xhtmlrenderer/layout/inline/FloatUtil.java | [
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wordRelation.addWord(digit2num[c-'0']); | wordRelation.addWord(tokenItem,digit2num[c-'0']); | public static void expandLetters(String letters, WordRelation wordRelation) { letters = letters.toLowerCase(); char c; for (int i = 0; i < letters.length(); i++) { // if this is a number c = letters.charAt(i); if (isDigit(c)) { wordRelation.addWord(digit2num[c-'0']); } else if (letters.... | 18648 /local/tlutelli/issta_data/temp/all_java1context/java/2006_temp/2006/18648/460d07833503253a5c476790f8921bd1e3c702a9/NumberExpander.java/buggy/java/de/dfki/lt/mary/modules/en/NumberExpander.java | [
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public org.quickfix.field.UnderlyingCPRegType getUnderlyingCPRegType() throws FieldNotFound { org.quickfix.field.UnderlyingCPRegType value = new org.quickfix.field.UnderlyingCPRegType(); | public quickfix.field.UnderlyingCPRegType getUnderlyingCPRegType() throws FieldNotFound { quickfix.field.UnderlyingCPRegType value = new quickfix.field.UnderlyingCPRegType(); | public org.quickfix.field.UnderlyingCPRegType getUnderlyingCPRegType() throws FieldNotFound { org.quickfix.field.UnderlyingCPRegType value = new org.quickfix.field.UnderlyingCPRegType(); getField(value); return value; } | 8803 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/8803/fecc27f98261270772ff182a1d4dfd94b5daa73d/OrderCancelReplaceRequest.java/clean/src/java/src/quickfix/fix44/OrderCancelReplaceRequest.java | [
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if( refpath.length() == 0 ) | if( refpath.length() == 0 ) { | protected String getReferenceFilesParameter() { //bail on no references if( _references == null ) return null; //iterate through the ref list & generate an entry for each //or just rely on the fact that the toString operator does this, but //noting that the separator... | 17033 /local/tlutelli/issta_data/temp/all_java1context/java/2006_temp/2006/17033/b95d90a13da3fb8d362982bc84652f1e03e8325e/CSharp.java/buggy/proposal/myrmidon/src/todo/org/apache/tools/ant/taskdefs/optional/dotnet/CSharp.java | [
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meta = (Vector)dbc.getMetaData().clone() ; | public String[] sqlQueryExt(String sqlQuery) { Vector data = new Vector() ; Vector meta = new Vector() ; DBConnect dbc = new DBConnect(m_conPool,sqlQuery) ; dbc.getConnection() ; dbc.createStatement() ; data = (Vector)dbc.executeQuery().clone() ; meta = (Vector)dbc.getMetaData().clone() ; if ( data.size() > 0 ) { ... | 8781 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/8781/bb0afaec593ded2585202ce0e0b09060c7106ea9/IMCPool.java/clean/server/src/imcode/server/IMCPool.java | [
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public BeanPointer(QName name, Object bean, JXPathBeanInfo beanInfo, Locale locale){ super(null, locale); this.name = name; this.bean = bean; this.beanInfo = beanInfo; } | public BeanPointer( QName name, Object bean, JXPathBeanInfo beanInfo, Locale locale) { super(null, locale); this.name = name; this.bean = bean; this.beanInfo = beanInfo; } | public BeanPointer(QName name, Object bean, JXPathBeanInfo beanInfo, Locale locale){ super(null, locale); this.name = name; this.bean = bean; this.beanInfo = beanInfo; } | 52531 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/52531/430fdd01e75a5e681274aa65adeb2d9826ee45a8/BeanPointer.java/buggy/src/java/org/apache/commons/jxpath/ri/model/beans/BeanPointer.java | [
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x++; | } if (selection.equals(debugConfigs[i].getID())) { defaultSelection = debugConfigs[i].getName(); | protected void loadDebuggerComboBox( ILaunchConfiguration config, String selection ) { fDCombo.removeAll(); ICDebugConfiguration[] debugConfigs = CDebugCorePlugin.getDefault().getDebugConfigurations(); String projectPlatform = getProjectPlatform( config ); int x = 0; int selndx = -1; for( int i = 0; i < debugCon... | 54911 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/54911/a192c2f172621fd921dbaebb14ee66fcee4f8f12/CoreFileDebuggerTab.java/clean/launch/org.eclipse.cdt.launch/src/org/eclipse/cdt/launch/ui/CoreFileDebuggerTab.java | [
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return handler.readFilter.readFilter(data, bf, charset, otherParams, new GenericReadFilterCallback()); | return handler.readFilter.readFilter(data, bf, charset, otherParams, new GenericReadFilterCallback(baseURI)); | public static Bucket filter(Bucket data, BucketFactory bf, String typeName) throws UnsafeContentTypeException, IOException { String type = typeName; String options = ""; String charset = null; HashMap otherParams = null; // First parse the MIME type int idx = type.indexOf(';'); if(idx != -1) { options = t... | 56348 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/56348/fed5a513af06f8d2ce8e1af88eb3fb217ee029e5/ContentFilter.java/buggy/src/freenet/clients/http/filter/ContentFilter.java | [
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throw NativeGlobal.typeError1("msg.not.ctor", "eval", scope); | throw typeError1("msg.not.ctor", "eval"); | public static Object callSpecial(Context cx, Object fun, boolean isNew, Object thisObj, Object[] args, Scriptable scope, Scriptable callerThis, int callType, String filenam... | 47345 /local/tlutelli/issta_data/temp/all_java4context/java/2006_temp/2006/47345/40f7554390dea10ea64bd490d09230d2c0814929/ScriptRuntime.java/clean/src/org/mozilla/javascript/ScriptRuntime.java | [
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request = new KoLRequest( "beanstalk.php" ); request.run(); | REDIRECT_FOLLOWER.constructURLString( "beanstalk.php" ); REDIRECT_FOLLOWER.run(); | private void validate( boolean visitedCouncil ) { if ( isValidAdventure ) return; if ( getRequest().getURLString().indexOf( "adventure.php" ) == -1 ) { isValidAdventure = true; return; } if ( adventureName.indexOf( "In Disguise" ) != -1 || adventureName.indexOf( "Cloaca Uniform" ) != -1 || adventureName.ind... | 50364 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/50364/85bf20ecca330c92f4049ea21335a864ec203962/KoLAdventure.java/buggy/src/net/sourceforge/kolmafia/KoLAdventure.java | [
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void addJobConfToEnvironment(JobConf conf, Properties env) { logprintln("addJobConfToEnvironment: begin"); | void addJobConfToEnvironment(JobConf conf, Properties env) { if (debug_) { logprintln("addJobConfToEnvironment: begin"); } | void addJobConfToEnvironment(JobConf conf, Properties env) { logprintln("addJobConfToEnvironment: begin"); Iterator it = conf.entries(); while(it.hasNext()) { Map.Entry en = (Map.Entry)it.next(); String name = (String)en.getKey(); String value = (String)en.getValue(); name = safe... | 50331 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/50331/e10b40e8014547113799b2653164e8c990d41209/PipeMapRed.java/buggy/src/contrib/streaming/src/java/org/apache/hadoop/streaming/PipeMapRed.java | [
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containingDocument.dispatchExternalEvent(pipelineContext, new XXFormsInitializeEvent(containingDocument)); | containingDocument.dispatchEvent(pipelineContext, new XXFormsInitializeEvent(containingDocument)); | public void readImpl(final PipelineContext pipelineContext, ContentHandler contentHandler) { // Get XForms model XFormsModel model = (XFormsModel) readCacheInputAsObject(pipelineContext, getInputByName(INPUT_MODEL), new CacheableInputReader(){ public Object r... | 57229 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/57229/e9e5c165d524bda80b4fe2b76ca37220ce0fe11b/XFormsInput.java/buggy/src/java/org/orbeon/oxf/processor/xforms/input/XFormsInput.java | [
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public DataGridBean(String beanId) { | public DataGridBean() { | public DataGridBean(String beanId) { super(); this.beanId = beanId; } | 49343 /local/tlutelli/issta_data/temp/all_java4context/java/2006_temp/2006/49343/3349ba869eb63edf91e64fe6d47320f64bd579ed/DataGridBean.java/buggy/src/org/gridlab/gridsphere/provider/portletui/beans/DataGridBean.java | [
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if (patarray.length>1) { for (int j=0;j<patarray.length;j++) { myModel.PatchList.add(patarray[j]); } } else { if (table.getSelectedRowCount()==0) myModel.PatchList.add(firstpat); else myModel.PatchList.add(table.getSelectedRow(),firstpat); } | if (patarray.length>1) { for (int j=0;j<patarray.length;j++) { myModel.PatchList.add(patarray[j]); } } else { if (table.getSelectedRowCount()==0) myModel.PatchList.add(firstpat); else myModel.PatchList.add(table.getSelectedRow(),firstpat); } | public void ImportPatch(File file) throws IOException,FileNotFoundException { int i; int offset=0; if (ImportMidiFile.doImport(file)) { return; } FileInputStream fileIn= new FileInputStream(file); byte [] buffer =new byte [(int)file.length()]; file... | 7591 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/7591/20bc8bc346af6352a17c3800757afb8d86f7ddd5/LibraryFrame.java/clean/JSynthLib/core/LibraryFrame.java | [
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result.put(meta.elementAt(i).toString(),temp_str) ; | result.put(meta[i] ,temp_str) ; | public Hashtable sqlQueryHash(String sqlQuery) { Vector data = new Vector() ; Vector meta = new Vector() ; DBConnect dbc = new DBConnect(m_conPool,sqlQuery) ; dbc.getConnection() ; dbc.createStatement() ; data = (Vector)dbc.executeQuery().clone() ; meta = (Vector)dbc.getMetaData().clone() ; int columns = dbc.getCol... | 8781 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/8781/bb0afaec593ded2585202ce0e0b09060c7106ea9/IMCPool.java/clean/server/src/imcode/server/IMCPool.java | [
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Set elementsToUnhook = new HashSet(elementsListenedTo); for (int i = 0; i < newValues.length; i++) { Object newValue = newValues[i]; IdentityWrapper identityWrapper = new IdentityWrapper(newValue); if(!elementsToUnhook.remove(identityWrapper)) { elementsListenedTo.add(identityWrapper); hookListener(newValue); } } | Set elementsToUnhook = hookToValues(values); | public void propertyChange(java.beans.PropertyChangeEvent event) { if (!updating) { Object[] newValues = getValues(); // make a copy of the set of objects listened to Set elementsToUnhook = new HashSet(elementsListenedTo); for (int i = 0; i < newValues.length; i++) { Object newValue = newValues[i]; ... | 57470 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/57470/60d469d086884a8575679c3fcf123b813421cd40/JavaBeanUpdatableCollection.java/clean/bundles/org.eclipse.jface.databinding/src/org/eclipse/jface/databinding/internal/beans/JavaBeanUpdatableCollection.java | [
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} else if ( GraphModelNode.HIGHLIGHT_PROP.equals( prop ) ) { setSelected( 1 ); } else if ( GraphModelNode.UNHIGHLIGHT_PROP.equals( prop ) ) { setSelected( 0 ); | } else if ( IGraphModelNode.HIGHLIGHT_PROP.equals( prop ) ) { if (((Boolean)evt.getNewValue()).booleanValue()) { setSelected(1); } else { setSelected(0); } | public void propertyChange(PropertyChangeEvent evt) { String prop = evt.getPropertyName(); // these properties are fired when Nodes and connections are added into or removed from // the LayoutDiagram instance and must cause a call of refreshChildren() // to update the diagram's contents. if (GraphModel.NODE_ADDE... | 11225 /local/tlutelli/issta_data/temp/all_java1context/java/2006_temp/2006/11225/1aa9d8e4021b81d1278aaf3ff0dc441a0f195829/GraphEditPart.java/buggy/org.eclipse.zest.core/src/org/eclipse/zest/core/internal/graphviewer/parts/GraphEditPart.java | [
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recoverFromMismatchedSet(input,mse,FOLLOW_set_in_square_chunk2602); throw mse; | recoverFromMismatchedSet(input,mse,FOLLOW_set_in_square_chunk2728); throw mse; | public String square_chunk() throws RecognitionException { String text = null; Token loc=null; String chunk = null; StringBuffer buf = null; Integer channel = null; try { // D:\\workspace\\jboss\\jbossrules\\drools... | 31577 /local/tlutelli/issta_data/temp/all_java3context/java/2006_temp/2006/31577/158de3e3177d9b48d45fb4c3fae8404e0f01f690/DRLParser.java/buggy/drools-compiler/src/main/java/org/drools/lang/DRLParser.java | [
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m_cmdl.addVmArgument( argument ); | m_exec.getVmArguments().addArgument( argument ); | public void addJvmarg( final Argument argument ) { m_cmdl.addVmArgument( argument ); } | 506 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/506/3fee832d2527f3b952683181980a446b44f5e5bf/Java.java/clean/proposal/myrmidon/src/todo/org/apache/tools/todo/taskdefs/Java.java | [
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event.getDropTargetContext ().dropComplete (true); | event.getDropTargetContext().dropComplete(true); | public void drop (DropTargetDropEvent event) { System.out.println ("DNDLibraryTable drop"); try { Transferable transferable = event.getTransferable (); Patch pat=(Patch)((PatchListModel)getModel ()).PatchList.get (this.rowAtPoint (event.getLocation ())); ... | 7591 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/7591/3b16911f3034387b67fd800fe8f1e5d32ef48df6/DNDLibraryTable.java/clean/JSynthLib/core/DNDLibraryTable.java | [
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try | try | public void ejbStore() throws RemoteException { PreparedStatement stmt= null; Connection conn = null; if (isDirty) { isDirty = false; try { conn = getConnection(); stmt = conn.prepareStatement("UPDATE ids SET category=?, region=?, users=?, item=?, comment=?, bid=?, buyNow=? WHERE id=?"); s... | 5750 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/5750/3d57ae5a342bc10d6c418636c07193a0289ffd6b/IDManagerBean.java/buggy/EJB_EntityBean_id_BMP/edu/rice/rubis/beans/IDManagerBean.java | [
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/* | /* | private void genAltHashFunction(Type type, Alternative alt) { if (!hasReservedTypeFields(type, alt)) { int arity = type.getAltArity(alt); String goldenratio = "0x9e3779b9"; int changingArg = guessChangingArgument(type, alt); String initval; if (changingArg > 0) { initval = "getArgument(" + changingArg + ... | 3664 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/3664/76875cdfe2af0d6de4ab58a245cce8bd703a86ab/AlternativeGenerator.java/clean/apigen/src/apigen/gen/java/AlternativeGenerator.java | [
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final String leftString = appendKeywords(leftKeywordHandler, leftFile.getContent(), DiffCreator.ENCODING); final String rightString = appendKeywords(rightKeywordHandler, rightFile.getContent(), DiffCreator.ENCODING); | final String leftString = replaceLeadingSpaces(appendKeywords(leftKeywordHandler, leftFile.getContent(), DiffCreator.ENCODING)); final String rightString = replaceLeadingSpaces(appendKeywords(rightKeywordHandler, rightFile.getContent(), DiffCreator.ENCODING)); | public DiffCreator(final RawTextFile leftFile, final KeywordHandler leftKeywordHandler, final RawTextFile rightFile, final KeywordHandler rightKeywordHandler) throws DiffException { final LineNumberAppender lineNumberAppender = new LineNumberAppender(); lineNumberAppender.setEmbedStart("<spa... | 50734 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/50734/9e55c98f837bd8624dfb0c1bc13430ded0ccdbb2/DiffCreator.java/buggy/sventon/dev/java/src/de/berlios/sventon/diff/DiffCreator.java | [
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else | } else { | makeDiagonalHatch(int fgColor, int bgColor, int spacing) { int w = imageWidth_; int h = imageHeight_; int pix[] = new int[w*h]; int index, y,x; index = 0; for (y=0; y<h; y++) { for (x=0; x<w; x++) { if ((x-y) % spacing == 0 || (x+y) % spacing == 0) pix[index++] = fgColor; else pix[index++... | 11319 /local/tlutelli/issta_data/temp/all_java1context/java/2006_temp/2006/11319/5deff89a0be0904aa602d8d38154596a7aeb1360/PatternMaker.java/buggy/datagrabber/src/org/cougaar/mlm/ui/newtpfdd/gui/component/PatternMaker.java | [
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logger.warning("Invalid Frame" + id); | logger.warning("Invalid Frame"); | protected void readFrames(ByteBuffer byteBuffer, int size) throws IOException { logger.finest("Start of frame body at" + byteBuffer.position()); //Now start looking for frames ID3v24Frame next; frameMap = new LinkedHashMap(); //Read the size from the Tag Header th... | 4849 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/4849/1f7617a332391805c306c6f2fcd2dbf8bc4d25cf/ID3v24Tag.java/buggy/src/org/jaudiotagger/tag/id3/ID3v24Tag.java | [
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if (debug) System.out.println("calling AVIReader.initFile(" + id + ")"); | if (debug) debug("initFile(" + id + ")"); | protected void initFile(String id) throws FormatException, IOException { if (debug) System.out.println("calling AVIReader.initFile(" + id + ")"); super.initFile(id); in = new RandomAccessStream(getMappedId(id)); in.order(true); offsets = new Vector(); byte[] list = new byte[4]; String listString;... | 11426 /local/tlutelli/issta_data/temp/all_java1context/java/2006_temp/2006/11426/2c680a5618955854e02d652bc68024b9a011950a/AVIReader.java/buggy/loci/formats/in/AVIReader.java | [
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Item v; Register r; if (type == JvmType.REFERENCE) { RefItem vr = vstack.popRef(); vr.load(eContext); r = vr.getRegister(); v = vr; } else { IntItem vi = vstack.popInt(); vi.load(eContext); r = vi.getRegister(); v = vi; } vstack.push(eContext); | Item v; Register r; if (type == JvmType.REFERENCE) { RefItem vr = vstack.popRef(); vr.load(eContext); r = vr.getRegister(); v = vr; } else { IntItem vi = vstack.popInt(); vi.load(eContext); r = vi.getRegister(); v = vi; } vstack.push(eContext); | private void visit_ifxx(int type, int address, int jccOpcode) { //IMPROVE: Constant case / Local case Item v; Register r; if (type == JvmType.REFERENCE) { RefItem vr = vstack.popRef(); vr.load(eContext); r = vr.getRegister(); v = vr; } e... | 1056 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/1056/55b12818040bb69b51502c4cd0f42118d2046977/X86BytecodeVisitor.java/buggy/core/src/core/org/jnode/vm/x86/compiler/l1a/X86BytecodeVisitor.java | [
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} | } | public static void runInAWTThread(Runnable run) { ioThreadPool.addWorkRequest(run,true); } | 6564 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/6564/65bb6a2acf338a840d8b22d96810ba924d55277b/VFSManager.java/clean/org/gjt/sp/jedit/io/VFSManager.java | [
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logger.info(message); | logger.info( message); | public void logVelocityMessage(int level, String message) { switch (level) { case LogSystem.WARN_ID: logger.warn( message ); break; case LogSystem.INFO_ID: logger.info(message); break; case LogSystem.DEBUG... | 9291 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/9291/d247c305d3e3c2c7d4e74d17b922c0dc0f68482f/AvalonLogSystem.java/clean/src/java/org/apache/velocity/runtime/log/AvalonLogSystem.java | [
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} else if (name == "Java::JavaClass") { return getJavaClassClass(); | private RubyModule getAutoload(String name) { name = name.intern(); if (name == "Array") { return getArrayClass(); } else if (name == "Bignum") { return getBignumClass(); } else if (name == "Binding") { return getBindingClass(); } else if (name == ... | 49687 /local/tlutelli/issta_data/temp/all_java4context/java/2006_temp/2006/49687/c7458ac1061bb236d4839296f3de89e6dcca1370/RubyClasses.java/clean/org/jruby/RubyClasses.java | [
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public static final JType createArrayList(JType jType) { return new JCollectionType("java.util.ArrayList", jType); | public static final JType createArrayList(JType jType, boolean usejava50) { return new JCollectionType("java.util.ArrayList", jType, usejava50); | public static final JType createArrayList(JType jType) { return new JCollectionType("java.util.ArrayList", jType); } | 3614 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/3614/44087e16fa464906abff19b2390830195c60355f/SGTypes.java/buggy/castor/trunk/src/main/java/org/exolab/castor/builder/SGTypes.java | [
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private void internalRefreshAll(boolean updateLabels) { // the parent // in the code below, it is important to do all disassociates // before any associates, since a later disassociate can undo an // earlier associate // e.g. if (a, b) is replaced by (b, a), the disassociate of b to // item 1 could undo // the ... | 58148 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/58148/72b02dfa9a75652d45af68d329d447e0e8bbe40d/TableViewer.java/clean/bundles/org.eclipse.jface/src/org/eclipse/jface/viewers/TableViewer.java | [
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AST tmp1169_AST_in = (AST)_t; | AST tmp1179_AST_in = (AST)_t; | public final void record_fields(AST _t) throws RecognitionException { AST record_fields_AST_in = (_t == ASTNULL) ? null : (AST)_t; if (_t==null) _t=ASTNULL; switch ( _t.getType()) { case FIELDS: { AST __t1032 = _t; AST tmp1166_AST_in = (AST)_t; match(_t,FIELDS); _t = _t.getFirstChild(); { if (_t==... | 13952 /local/tlutelli/issta_data/temp/all_java1context/java/2006_temp/2006/13952/f492fd11e745beb562b4e209643ba003aa8a6271/TreeParser01.java/clean/trunk/org.prorefactor.core/src/org/prorefactor/treeparser01/TreeParser01.java | [
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if ( metadataType.equals( GROUP_TYPE ) ) | if ( metadataType.equals( MetadataRepositoryIndex.GROUP_METADATA ) ) | private RepositoryMetadata getMetadata( String groupId, String artifactId, String version, String filename, String metadataType ) throws Exception { RepositoryMetadata repoMetadata = null; URL url; InputStream is = null; MetadataXpp3Re... | 28441 /local/tlutelli/issta_data/temp/all_java2context/java/2006_temp/2006/28441/b06ee5cab37ea8091419fd4d369457271ce9c12f/MetadataRepositoryIndexingTest.java/clean/maven-repository-indexer/src/test/java/org/apache/maven/repository/indexing/MetadataRepositoryIndexingTest.java | [
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wait(); | runningDecodesSync.wait(); | public void encode(SplitfileBlock[] dataBlockStatus, SplitfileBlock[] checkBlockStatus, int blockLength, BucketFactory bf) throws IOException { // Encodes count as decodes. synchronized(runningDecodesSync) { while(runningDecodes >= PARALLEL_DECODES) { try { wait(); } catch (InterruptedException e) { ... | 46731 /local/tlutelli/issta_data/temp/all_java4context/java/2006_temp/2006/46731/f3e8db3d18ab7fe6278e45269c4260e3bc7ea7aa/StandardOnionFECCodec.java/buggy/src/freenet/client/StandardOnionFECCodec.java | [
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private synchronized void updateStores() { if (fSession == null) { getSession(); } if (fStores != null) { closeStores(); } ServerArray prefs = ServerArray.GetMaster(); fStores = new ViewedStore[prefs.size()]; for (int i=0; i<prefs.size(); i++) { fStores[i] = createStore... | 51996 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/51996/2769f32da7bc2e7ccdde98f47e0c777769fb9113/StoreFactory.java/buggy/grendel/sources/grendel/ui/StoreFactory.java | [
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&& misfiredTriggers.length > getMaxMisfiresToHandleAtATime()) getLog() .info( | && misfiredTriggers.length > getMaxMisfiresToHandleAtATime()) { getLog().info( | protected boolean recoverMisfiredJobs(Connection conn, boolean recovering) throws JobPersistenceException, NoSuchDelegateException, SQLException, ClassNotFoundException, IOException { Key[] misfiredTriggers = getDelegate().selectTriggersInState(conn, STATE_MISFIRED); ... | 15562 /local/tlutelli/issta_data/temp/all_java1context/java/2006_temp/2006/15562/f6eeea5a952e67d6b7fc8b54ae64d0b9e7098a98/JobStoreSupport.java/clean/src/java/org/quartz/impl/jdbcjobstore/JobStoreSupport.java | [
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Location result = (Location) ((ResultsRow) cl.findLocations(Chromosome.class, Contig.class).next()).get(2); | Iterator chrContigIter = CalculateLocations.findLocations(osw.getObjectStore(), Chromosome.class, Contig.class); Location result = (Location) ((ResultsRow) chrContigIter.next()).get(2); | public void testContigToSupercontig() throws Exception { Set toStore = new HashSet(Arrays.asList(new Object[] {getChromosome(), getChromosomeBand(), getBandOnChr()})); Supercontig sc = (Supercontig) DynamicUtil.createObject(Collections.singleton(Supercontig.class)); Contig c = (Contig) DynamicU... | 29158 /local/tlutelli/issta_data/temp/all_java2context/java/2006_temp/2006/29158/29227f0ba7639e148be613907fd5e8178603c022/CalculateLocationsTest.java/clean/flymine/model/genomic/src/test/org/flymine/postprocess/CalculateLocationsTest.java | [
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sb.append( "-box(" + x + "," + y + ")-(" + width + "x" + height + ")" ); | sb.append("-box(" + x + "," + y + ")-(" + width + "x" + height + ")"); | public String getTestString() { StringBuffer sb = new StringBuffer(); // type if ( this instanceof LineBox ) { sb.append( "line:" ); } else if ( this instanceof InlineBox ) { sb.append( "inline:" ); } else { sb.append( "box:" ); } // ... | 52947 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/52947/8f81e5fe9f6f8593d3c596d30a3f100cb87dbf27/Box.java/clean/src/java/org/xhtmlrenderer/render/Box.java | [
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public RubyArray instance_variables() { ArrayList names = new ArrayList(); for(Iterator iter = getInstanceVariablesSnapshot().keySet().iterator();iter.hasNext();) { String name = (String) iter.next(); // Do not include constants which also get stored in instance var l... | 52337 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/52337/c8b66db475de1dc66f347884891dd70d9943689b/RubyObject.java/clean/src/org/jruby/RubyObject.java | [
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int offset = ((IDocumentAttribute)attr).getValueOffset() + value.indexOf(group) + attr.getValue().indexOf(value); | int offset = ((IDocumentAttribute)attr).getValueOffset() + value.indexOf(group); int attOffset = attr.getValue().indexOf(value); if (attOffset != -1) offset += attOffset; | private void checkMatch(IPluginAttribute attr, IFile file) { String value = null; Matcher matcher = null; if (fSearchFor == S_FOR_TYPES) { value = attr.getValue(); matcher = getMatcher(value); } if (value == null || (matcher != null && !matcher.matches()) ){ value = getProperValue(attr.getValue()); matche... | 8783 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/8783/cf890111d2e295c84879813774721a2301aae78f/ClassSearchParticipant.java/clean/ui/org.eclipse.pde.ui/src/org/eclipse/pde/internal/ui/search/ClassSearchParticipant.java | [
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for (Iterator i = FeatureStream.iterator(); i.hasNext();) { | for (Iterator i = linguist.getFeatureStreams(); i.hasNext();) { | private void prune() { pruneTimer.start(); debugPrint("Pruning"); if (doFeaturePruning) { for (Iterator i = FeatureStream.iterator(); i.hasNext();) { FeatureStream stream = (FeatureStream) i.next(); debugPrint(" ActiveList, " + stream.getName() + ": " + stream.getActiveList()... | 48839 /local/tlutelli/issta_data/temp/all_java4context/java/2006_temp/2006/48839/f9ac364ceffffb4c07a0409366d6f26d8028b996/ParallelSearchManager.java/buggy/sphinx4/edu/cmu/sphinx/research/parallel/ParallelSearchManager.java | [
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try { position++; bCodeStream[classFileOffset++] = OPC_ldiv; } catch (IndexOutOfBoundsException e) { resizeByteArray(OPC_ldiv); | if (classFileOffset >= bCodeStream.length) { resizeByteArray(); | final public void ldiv() { if (DEBUG) System.out.println(position + "\t\tldiv"); //$NON-NLS-1$ countLabels = 0; stackDepth -= 2; try { position++; bCodeStream[classFileOffset++] = OPC_ldiv; } catch (IndexOutOfBoundsException e) { resizeByteArray(OPC_ldiv); }} | 10698 /local/tlutelli/issta_data/temp/all_java1context/java/2006_temp/2006/10698/3a562aaf09f9f323b583086b80b4683378886606/CodeStream.java/buggy/org.eclipse.jdt.core/compiler/org/eclipse/jdt/internal/compiler/codegen/CodeStream.java | [
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protected String getPersistedEncoding( Object element ) { if ( element instanceof IStorageEditorInput ) { IStorage storage; try { storage = ( (IStorageEditorInput) element ).getStorage( ); if ( storage instanceof IEncodedStorage ) return ( (IEncodedStorage) storage ).getCharset( ); } catch ( CoreException e ) { return ... | abstract protected String getPersistedEncoding( Object element ); | protected String getPersistedEncoding( Object element ) { if ( element instanceof IStorageEditorInput ) { IStorage storage; try { storage = ( (IStorageEditorInput) element ).getStorage( ); if ( storage instanceof IEncodedStorage ) return ( (IEncodedStorage) storage ).getCharset( ); } catch ( Core... | 5230 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/5230/6f2cf7b4fd162793a87225de7707b5275d4356a3/DocumentProvider.java/buggy/UI/org.eclipse.birt.report.designer.ui/src/org/eclipse/birt/report/designer/internal/ui/editors/DocumentProvider.java | [
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Object resultCars = getCars.invoke(action, null); assertEquals(Arrays.asList(new String[]{"renault", "fiat"}), resultCars); | String[] resultCars = (String[]) getCars.invoke(action, null); String[] expectedCars = new String[]{"renault", "fiat"}; assertEquals(Arrays.asList(expectedCars), Arrays.asList(resultCars)); | public void testParametersShouldBeSetAndExecuteInvokedOnGroovyAction() throws IOException, ServletException, NoSuchMethodException, IllegalAccessException, InvocationTargetException { // url params Map parameterMap = new HashMap(); parameterMap.put("year", "2003"); parameterMap.put("cars... | 14040 /local/tlutelli/issta_data/temp/all_java1context/java/2006_temp/2006/14040/1773ae9d68e9eee5e3a13ba200cc6ee01377a610/NanoWebServletTestCase.java/buggy/java/nanoweb/src/test/org/nanocontainer/nanoweb/NanoWebServletTestCase.java | [
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PeerNode[] peerNodes = node.getDarknetConnections(); | PeerNodeStatus[] peerNodeStatuses = node.getPeerNodeStatuses(); | public void handleGet(URI uri, ToadletContext ctx) throws ToadletContextClosedException, IOException, RedirectException { String path = uri.getPath(); if(path.endsWith("myref.txt")) { SimpleFieldSet fs = node.exportPublicFieldSet(); StringWriter sw = new StringWriter(); fs.writeTo(sw); this.writeReply(ctx,... | 50619 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/50619/8894de616e17a43e740747a9eb17956bab9b3b3d/DarknetConnectionsToadlet.java/clean/src/freenet/clients/http/DarknetConnectionsToadlet.java | [
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client.saveBugReport(task.getBugReport()); | client.saveBugReport(task.getTaskData()); | public void testSynchronize() throws InterruptedException, PartInitException, LoginException, BugzillaException, PossibleBugzillaFailureException { // Get the task BugzillaTask task = (BugzillaTask) client.createTaskFromExistingKey(repository, "1"); MylarTaskListPlugin.getTaskListManager().getTaskList().moveToRoo... | 51989 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/51989/d6adf902ecafbef942349464348e4435750dd099/BugzillaRepositoryConnectorTest.java/buggy/org.eclipse.mylyn.bugzilla.tests/src/org/eclipse/mylyn/bugzilla/tests/BugzillaRepositoryConnectorTest.java | [
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public org.quickfix.field.OrigOrdModTime getOrigOrdModTime() throws FieldNotFound { org.quickfix.field.OrigOrdModTime value = new org.quickfix.field.OrigOrdModTime(); | public quickfix.field.OrigOrdModTime getOrigOrdModTime() throws FieldNotFound { quickfix.field.OrigOrdModTime value = new quickfix.field.OrigOrdModTime(); | public org.quickfix.field.OrigOrdModTime getOrigOrdModTime() throws FieldNotFound { org.quickfix.field.OrigOrdModTime value = new org.quickfix.field.OrigOrdModTime(); getField(value); return value; } | 8803 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/8803/fecc27f98261270772ff182a1d4dfd94b5daa73d/CrossOrderCancelRequest.java/buggy/src/java/src/quickfix/fix43/CrossOrderCancelRequest.java | [
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public PagelMatrixModel(String name, Class dataClass, int behavior) { super(name,dataClass,charsFromBehavior(behavior)); this.modelType = behavior; this.params=null; // model's parameters qConstrained=null; // true if a parameter is somehow constrained qBound=... | 56479 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/56479/6b851d6552b6f3d5f999eeb504d2e4524f44dce0/PagelMatrixModel.java/buggy/Source/mesquite/correl/lib/PagelMatrixModel.java | [
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MylarTaskEditor taskEditor = (MylarTaskEditor) page.getActiveEditor(); | TaskEditor taskEditor = (TaskEditor) page.getActiveEditor(); | public void testStackTraceOther() throws Exception { // jamvm, sablevm, kaffe, cacao (space before brackets, one set of brackets) String stackTrace = "java.lang.Error: Something bad happened\n" + " at testcase.main (testcase.java:3)\n" + " at java.lang.VirtualMachine.invokeMain (VirtualMachine.java)\n" + " ... | 51989 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/51989/1ab2ed5625d0594349ae757fb5814739d0eff502/DuplicateDetetionTest.java/clean/org.eclipse.mylyn.bugzilla.tests/src/org/eclipse/mylyn/bugzilla/tests/DuplicateDetetionTest.java | [
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if (null != prot_adapter) { | if(null != prot_adapter) { | public void start() { if (corr == null) { if (transport_adapter != null) { corr = new RequestCorrelator("MessageDispatcher", transport_adapter, this, deadlock_detection, local_addr, concurrent_processing); } else { ... | 48949 /local/tlutelli/issta_data/temp/all_java4context/java/2006_temp/2006/48949/896f3041ac6c83d0d1b4ad10041face165c97e1d/MessageDispatcher.java/buggy/src/org/jgroups/blocks/MessageDispatcher.java | [
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return (EAttribute)scaleEClass.getEStructuralFeatures().get(4); | return (EAttribute) scaleEClass.getEStructuralFeatures().get(4); | public EAttribute getScale_MinorGridsPerUnit() { return (EAttribute)scaleEClass.getEStructuralFeatures().get(4); } | 15160 /local/tlutelli/issta_data/temp/all_java1context/java/2006_temp/2006/15160/e5c78f0e8317166d02fa384e14c3dd7aa1796f2c/ComponentPackageImpl.java/buggy/chart/org.eclipse.birt.chart.engine/src/org/eclipse/birt/chart/model/component/impl/ComponentPackageImpl.java | [
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if(StreamItOptions.sync) count++; else { FlatNode[] edges = ((FlatNode)entry.getValue()).edges; int increment = 1; for (int i=0; i<edges.length; i++) { if (edges[i]!=null && edges[i].contents instanceof SIRJoiner) { increment = 0; } | FlatNode[] edges = ((FlatNode)entry.getValue()).edges; int increment = 1; for (int i=0; i<edges.length; i++) { if (edges[i]!=null && edges[i].contents instanceof SIRJoiner) { increment = 0; | public int getNumTiles() { dumpGraph("crash.dot"); int count = 0; for (Iterator it = SIRMap.entrySet().iterator(); it.hasNext(); ) { Map.Entry entry = (Map.Entry)it.next(); if (entry.getKey() instanceof SIRFilter) { if (Util.countMe((SIRFilter)entry.getKey())) count++; } else if (entry.getKey(... | 5955 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/5955/e3f6bd0573bf8b2edbc6cda4a9c3bada2dec21b1/RawFlattener.java/clean/streams/src/at/dms/kjc/raw/RawFlattener.java | [
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SessionFactory sessionFactory = super.buildSessionFactory(); Collection classMetaData = sessionFactory.getAllClassMetadata().values(); for (Iterator i = classMetaData.iterator(); i.hasNext();) { ClassMetadata cmd = (ClassMetadata) i.next(); Class persistentClass = cmd.getMappedClass(EntityMode.POJO); LOG.info("[Grails... | SessionFactory sessionFactory = super.buildSessionFactory(); if(configureDynamicMethods) { configureDynamicMethods(sessionFactory); } return sessionFactory; } | public SessionFactory buildSessionFactory() throws HibernateException { SessionFactory sessionFactory = super.buildSessionFactory(); Collection classMetaData = sessionFactory.getAllClassMetadata().values(); for (Iterator i = classMetaData.iterator(); i.hasNext();) { ClassMetadata cmd = (ClassMetadata) i.next(); ... | 53275 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/53275/903f4b388a57a464f9d14176ea5d25485de66436/DefaultGrailsDomainConfiguration.java/clean/src/persistence/org/codehaus/groovy/grails/orm/hibernate/cfg/DefaultGrailsDomainConfiguration.java | [
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if (eIsProxy()) return super.toString(); | if (eIsProxy()) return super.toString(); | public String toString() { if (eIsProxy()) return super.toString(); StringBuffer result = new StringBuffer(super.toString()); result.append(" (types: "); //$NON-NLS-1$ result.append(types); result.append(')'); return result.toString(); } | 8196 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/8196/ebce0dfcf980c405fd07c019b6f4466152262cb7/ArchiveImpl.java/buggy/plugins/org.eclipse.jst.j2ee.core/commonArchive/org/eclipse/jst/j2ee/commonarchivecore/internal/impl/ArchiveImpl.java | [
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decoration.addOverlay(JiraImages.OVERLAY_IMPROVEMENT, IDecoration.BOTTOM_RIGHT); | decoration.addOverlay(JiraImages.OVERLAY_IMPROVEMENT, IDecoration.TOP_LEFT); | public void decorate(Object element, IDecoration decoration) { if (element instanceof JiraFilterHit) { JiraFilterHit hit = (JiraFilterHit) element; if (hit.getCorrespondingTask() != null) { decorate(hit.getCorrespondingTask(), decoration); } } if (element instanceof JiraTask) { JiraTask task = (JiraTask)... | 51151 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/51151/471307e5d8de847fded72a0e6835fe36d31939c1/JiraTaskDecorator.java/clean/org.eclipse.mylyn.jira.ui/src/org/eclipse/mylyn/internal/jira/ui/JiraTaskDecorator.java | [
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if(names.length != 2) throw new IllegalArgumentException("Found project insted of a file."); | private FileIdentifier getFileIdentifierFor(Long fileIdentifier) { for(Entry<String, Long> entry : identifiers.entrySet()) { if(entry.getValue().equals(fileIdentifier)) { String key = entry.getKey(); String[] names = key.split("[|]"); if(names.length != 2) throw new IllegalArgumentException("Found pr... | 48076 /local/tlutelli/issta_data/temp/all_java4context/java/2006_temp/2006/48076/c49798ac892fce395e10fd06f084263060c4fd6e/Cache.java/clean/src/web/onClient/hr/fer/zemris/vhdllab/applets/main/Cache.java | [
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if (monitor.isCanceled()) throw new OperationCanceledException(); | if (monitor.isCanceled()) { throw new OperationCanceledException(); } | protected void createFile(IFile fileHandle, InputStream contents, IProgressMonitor monitor) throws CoreException { if (contents == null) contents = new ByteArrayInputStream(new byte[0]); try { // Create a new file resource in the workspace if (linkTargetPath... | 55805 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/55805/e38d295ea613cf9f08aadb93a84a33d2e91abc5f/WizardNewFileCreationPage.java/clean/bundles/org.eclipse.ui.ide/extensions/org/eclipse/ui/dialogs/WizardNewFileCreationPage.java | [
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Atom partner = null; Atom atom = null; Atom[] partners = null; AtomType[] atomTypes1 = null; AtomType[] atomTypes2 = null; Bond bond = null; for (int i = 1; i < 4; i++) { | for (int i = 1; i < 4; i++) { logger.debug("Considering atoms with " + i + " neighbours..."); | public void saturate(AtomContainer atomContainer) throws CDKException { logger.info("Saturating atomContainer by adjusting bond orders..."); Atom partner = null; Atom atom = null; Atom[] partners = null; AtomType[] atomTypes1 = null; AtomType[] atomTypes2 = null; Bond bond = null; for (int i = 1; i < 4; ... | 45167 /local/tlutelli/issta_data/temp/all_java4context/java/2006_temp/2006/45167/be13fdf1f2a350aa09b1005daaf9f9a71c02f4a6/SaturationChecker.java/buggy/src/org/openscience/cdk/tools/SaturationChecker.java | [
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public void setAddfiles( Path addfiles ) { if ( this .addfiles == null ) { this .addfiles = addfiles; | public void setAddfiles(Path addfiles) { if (this.addfiles == null) { this.addfiles = addfiles; | public void setAddfiles( Path addfiles ) { if ( this .addfiles == null ) { this .addfiles = addfiles; } else { this .addfiles .append( addfiles ); } } | 17033 /local/tlutelli/issta_data/temp/all_java1context/java/2006_temp/2006/17033/c7b5b643b25b20f5c96097b2c54e2e26a054f212/JlinkTask.java/buggy/src/main/org/apache/tools/ant/taskdefs/optional/jlink/JlinkTask.java | [
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int todo = 0; A_CmsXmlDocument xmlDoc = (A_CmsXmlDocument)document; String encoding = xmlDoc.getEncoding(); CmsLinkProcessor linkProcessor = xmlDoc.getLinkProcessor(cms, new CmsLinkTable()); | if (document != null) { | public void setStringValue(CmsObject cms, I_CmsXmlDocument document, String value) throws CmsXmlException { Element content = m_element.element(CmsXmlPage.NODE_CONTENT); Element links = m_element.element(CmsXmlPage.NODE_LINKS); int todo = 0; // TODO: solve Interface vs. abstract issue ... | 51784 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/51784/6544df384a08c2b3f4af8dd8d906cd9bfffe7189/CmsXmlHtmlValue.java/buggy/src/org/opencms/xml/types/CmsXmlHtmlValue.java | [
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btnDecoration.setSelection( ( (GanttSeries) series ).isUseDecorationLabelValue( ) ); | btnDecoration.setSelection( series.isUseDecorationLabelValue( ) ); | private void placeComponents( ) { // Layout for content composite GridLayout glContent = new GridLayout( ); glContent.numColumns = 8; glContent.marginHeight = 2; glContent.marginWidth = 2; // Main content composite this.setLayout( glContent ); // Layout for the Marker group GridLayout glMarker = new GridLayou... | 15160 /local/tlutelli/issta_data/temp/all_java1context/java/2006_temp/2006/15160/c14da3b527cef2399a3a605a3129c5e9e98d840f/GanttSeriesAttributeComposite.java/clean/chart/org.eclipse.birt.chart.ui.extension/src/org/eclipse/birt/chart/ui/swt/series/GanttSeriesAttributeComposite.java | [
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asm.emitSUBFC(KLUDGE_TI_REG, PROCESSOR_REGISTER, TI ); | asm.emitSUBFC(KLUDGE_TI_REG, PROCESSOR_REGISTER, KLUDGE_TI_REG); | static void storeParametersForOSX(VM_Assembler asm, int frameSize, VM_Method method, VM_Class klass) { int nextOSXArgReg, nextOSXArgFloatReg, nextVMArgReg, nextVMArgFloatReg; // offset to the spill area in the callee (Osx frame) // remove int spil... | 5245 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/5245/e31cb833225947f4b1d41534a3c2e3390f239133/VM_JNICompiler.java/clean/rvm/src/vm/arch/powerPC/jni/VM_JNICompiler.java | [
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tokfix(); | private int parse_string(int func, int term, int paren) { int c; Node list = null; int strstart; int nest = 0; if (func == '\'') { return parse_qstring(term, paren); } if (func == 0) { // read 1 line for heredoc // -1 for chomp ... | 49687 /local/tlutelli/issta_data/temp/all_java4context/java/2006_temp/2006/49687/d31a76ee29d5978a9bec41e3ac9134cee024bcab/DefaultRubyScanner.java/buggy/org/jruby/parser/DefaultRubyScanner.java | [
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public void testTransformations() throws Exception { Encoding encoding = Encoding.getEncoding("UNICODE", null); assertEquals("ab", encoding.decode(new byte[] { 97, 98 })); assertEquals(2, encoding.encode("ab").length); assertEquals(97, encoding.encode("a")[0]); assertEquals(98, encoding.encode("b")[0]); encoding = E... | public void testCreation() throws Exception { Encoding encoding; encoding = Encoding.getEncoding("UNICODE", null); assertEquals("UTF", encoding.name().substring(0, 3).toUpperCase()); encoding = Encoding.getEncoding("SQL_ASCII", null); assert(encoding.name().toUpperCase().indexOf("ASCII") != -1); assertEquals("When ... | 49504 /local/tlutelli/issta_data/temp/all_java4context/java/2006_temp/2006/49504/b75814aee320ef2b67ad01ba72c266dbbf94db45/EncodingTest.java/buggy/src/interfaces/jdbc/org/postgresql/test/jdbc2/EncodingTest.java | [
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if (rect.y <= topMargin) { scrolled = scrollVertical(rect.y - topMargin, true); } else if (rect.y + rect.height > clientAreaHeight) { scrolled = scrollVertical(rect.y + rect.height - clientAreaHeight, true); } | boolean showLocation(Rectangle rect) { int clientAreaWidth = this.clientAreaWidth - leftMargin - rightMargin; int clientAreaHeight = this.clientAreaHeight - topMargin - bottomMargin; boolean scrolled = false; if (clientAreaWidth > 0) { // always make 1/4 of a page visible if (rect.x < leftMargin) { int scrollWidth ... | 12413 /local/tlutelli/issta_data/temp/all_java1context/java/2006_temp/2006/12413/c1944febeea9219ca29a4c8310702a14850295a7/StyledText.java/clean/bundles/org.eclipse.swt/Eclipse SWT Custom Widgets/common/org/eclipse/swt/custom/StyledText.java | [
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existinglength=existingData.length; newlength=data.length; AdditionalData[] updateddata=new AdditionalData [existinglength +newlength]; System.arraycopy(existingData,0,updateddata,0,existinglength); System.arraycopy(data,0,updateddata,existinglength,newlength); existingregObject.setAdditionalData(updateddata); | public RegistrationAlert addtoRegistartion(RegistrationAlert existingregObject,RegistrationAlert newregobject) { Classification [] existingClassifications=existingregObject.getClassifications(); Source[] existingSources=existingregObject.getSources(); Target[]existingTargets=existingregObject.getTargets(); ... | 12869 /local/tlutelli/issta_data/temp/all_java1context/java/2006_temp/2006/12869/a818a300930387b0f1ae9bde04631eba32944c10/CapabilitiesProcessingPlugin.java/clean/securityservices/src/org/cougaar/core/security/monitoring/plugin/CapabilitiesProcessingPlugin.java | [
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public HashMap match(Map query) throws Error { | public HashMap match(Map query) throws Error { | public HashMap match(Map query) throws Error { if (!(type instanceof TypeObject)) throw new Error(NOT_A_JSONR_OBJECT_TYPE); Type type; String name; String[] strings; HashMap namespace = ((TypeObject) this.type).namespace(); HashMap valid = new HashMap... | 55996 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/55996/9879c06a79e084e106d2421c35cbe9acac302aef/JSONR.java/clean/trunk/org/less4j/JSONR.java | [
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if (kind > 53) kind = 53; | if (kind > 56) kind = 56; | private final int jjMoveNfa_0(int startState, int curPos){ int[] nextStates; int startsAt = 0; jjnewStateCnt = 28; int i = 1; jjstateSet[0] = startState; int j, kind = 0x7fffffff; for (;;) { if (++jjround == 0x7fffffff) ReInitRounds(); if (curChar < 64) { long l = 1L << cu... | 6965 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/6965/310be8d52869f0ee2c185cb657525fc655f30133/ZimbraQueryParserTokenManager.java/buggy/ZimbraServer/src/java/com/zimbra/cs/index/queryparser/ZimbraQueryParserTokenManager.java | [
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public IReportRunnable openReportDesign( String report ) | public IReportRunnable openReportDesign( String report, Map options ) | public IReportRunnable openReportDesign( String report ) throws EngineException { return engine.openReportDesign( report ); } | 46013 /local/tlutelli/issta_data/temp/all_java4context/java/2006_temp/2006/46013/6750b617d962564415d786421fab385be3789fb1/ReportEngineService.java/buggy/viewer/org.eclipse.birt.report.viewer/birt/WEB-INF/classes/org/eclipse/birt/report/service/ReportEngineService.java | [
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ret = "namespace:uri="; for (int i = 0; i < fNamespaceList.length; i++) ret += fNamespaceList[i] + ","; | ret = "namespace:uri=" + fNamespaceList[0]; for (int i = 1; i < fNamespaceList.length; i++) ret += "," + fNamespaceList[i]; | public String toString() { String ret = null; switch (fType) { case WILDCARD_ANY: ret = SchemaSymbols.ATTVAL_TWOPOUNDANY; break; case WILDCARD_OTHER: ret = SchemaSymbols.ATTVAL_TWOPOUNDOTHER + ":uri=" + fNamespaceList[0]; break; case WIL... | 4434 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/4434/5bee80149c1cfdcd09a23cc970545d636b9f498c/XSWildcardDecl.java/buggy/src/org/apache/xerces/impl/v2/XSWildcardDecl.java | [
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plotTop = bo.getTop( ) + szTitle.getHeight( ); | plotTop = bo.getTop( ); switch ( titleAnchor.getValue( ) ) { case Anchor.WEST : boLegend.setLeft( bo.getLeft( ) + szTitle.getWidth( ) ); plotLeft = bo.getLeft( ) + szTitle.getWidth( ); break; case Anchor.EAST : boTitle.setLeft( bo.getLeft( ) + bo.getWidth( ) - szTitle.getWidth( ) ); break; case Anchor.NORTH : case Anc... | private void doLayout_tmp( IDisplayServer xs, Chart cm, Bounds boFull, RunTimeContext rtc ) throws ChartException { final boolean isRightToLeft = rtc.isRightToLeft( ); Block bl = cm.getBlock( ); bl.setBounds( boFull ); Insets ins = bl.getInsets( ); Bounds bo = boFull.adjustedInstance( ins ); Legend lg = cm.get... | 46013 /local/tlutelli/issta_data/temp/all_java4context/java/2006_temp/2006/46013/e4d3fbd7ab05362cb40b7c0e0475462d1ec91834/LayoutManager.java/clean/chart/org.eclipse.birt.chart.engine/src/org/eclipse/birt/chart/internal/layout/LayoutManager.java | [
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return mail; | return mail; | public Mail getMail() { return mail; } | 47102 /local/tlutelli/issta_data/temp/all_java4context/java/2006_temp/2006/47102/d4f817efab178e73e483e869f48c06a7985ceadf/SMTPHandler.java/buggy/sandbox/handlerapi2/src/java/org/apache/james/smtpserver/SMTPHandler.java | [
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readInputAsSAX(pipelineContext, INPUT_CONFIG, new XIncludeContentHandler(pipelineContext, contentHandler)); | final TransformerURIResolver uriResolver = new TransformerURIResolver(XIncludeProcessor.this, pipelineContext, INPUT_CONFIG, false); readInputAsSAX(pipelineContext, INPUT_CONFIG, new XIncludeContentHandler(pipelineContext, contentHandler, uriResolver)); | public ProcessorOutput createOutput(final String name) { ProcessorOutput output = new URIProcessorOutputImpl(getClass(), name, INPUT_CONFIG) { public void readImpl(final PipelineContext pipelineContext, final ContentHandler contentHandler) {// final ContentHandler debugContentHandle... | 52783 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/52783/6c3097b221d9f8a89608fc34eee82d5df15e8fcb/XIncludeProcessor.java/clean/src/java/org/orbeon/oxf/processor/xinclude/XIncludeProcessor.java | [
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List<String> result = new ArrayList<String>(); BufferedReader br = new BufferedReader(new FileReader(file)); String line = br.readLine(); while (null != line) { result.add(line); line = br.readLine(); } return result; } | List<String> result= new ArrayList<String>(); BufferedReader br= new BufferedReader(new FileReader(file)); String line= br.readLine(); while(null != line) { result.add(line); line= br.readLine(); } return result; } | private List<String> fileToLines(File file) throws IOException { List<String> result = new ArrayList<String>(); BufferedReader br = new BufferedReader(new FileReader(file)); String line = br.readLine(); while (null != line) { result.add(line); line = br.readLine(); } return result; } | 46166 /local/tlutelli/issta_data/temp/all_java4context/java/2006_temp/2006/46166/75c0741cfb0fc75ef79c70ec78da0a1cd8144089/AnnotationTestConverter.java/buggy/src/main/org/testng/internal/AnnotationTestConverter.java | [
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(XmlSchemaSequence) restrictionObj.particle, schema); | (XmlSchemaSequence) restrictionObj.particle, schema); | Element serializeComplexContentRestriction(Document doc, XmlSchemaComplexContentRestriction restrictionObj, XmlSchema schema) throws XmlSchemaSerializerException { Element restriction = createNewElement(doc, "restriction", ... | 58536 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/58536/583d6c2db5f993d3085942269eca1b2ab8f3bc5f/XmlSchemaSerializer.java/buggy/src/org/apache/ws/commons/schema/XmlSchemaSerializer.java | [
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String[] schemas = transMeta.getClusterSchemaNames(); EnterSelectionDialog schemaDialog = new EnterSelectionDialog(shell, schemas, "Select a cluster schema", "Select the clustering schema to use: "); if (schemaDialog.open()==null || schemaDialog.getSelectionNr()<0) return; ClusterSchema clusterSchema = (ClusterSchema... | SlaveServer slaveServer = executionConfiguration.getRemoteServer(); | public void sendXMLToSlaveServer() { // Select a cluster schema... String[] schemas = transMeta.getClusterSchemaNames(); EnterSelectionDialog schemaDialog = new EnterSelectionDialog(shell, schemas, "Select a cluster schema", "Select the clustering schema to use: "); if (schemaDialog.o... | 9547 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/9547/49a35ab9e0273ac366b7d409db1874d717bfdfaa/Spoon.java/clean/src/be/ibridge/kettle/spoon/Spoon.java | [
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case Token.NAMEINC : case Token.NAMEDEC : | case Icode_NAMEINC : case Icode_NAMEDEC : | private static void dumpICode(InterpreterData idata) { if (Token.printICode) { try { int iCodeLength = idata.itsICodeTop; byte iCode[] = idata.itsICode; String[] strings = idata.itsStringTable; out = new PrintWriter(new FileOutputStream("... | 51275 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/51275/faf2a30c39fc508f2635416a94f9662c4ae41ad3/Interpreter.java/buggy/js/rhino/src/org/mozilla/javascript/Interpreter.java | [
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iVisited.accept(_Payload); | _Payload.visitDefinedNode(iVisited); | public void visitDefinedNode(DefinedNode iVisited) { iVisited.accept(_Payload); } | 46258 /local/tlutelli/issta_data/temp/all_java4context/java/2006_temp/2006/46258/043fa4419ad506aa6f8843684eb8114b226fe4b5/DefaultIteratorVisitor.java/clean/org/jruby/nodes/visitor/DefaultIteratorVisitor.java | [
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private void flushDeferredText(){ | private void flushDeferredText() { | private void flushDeferredText(){ ApplicationManager.getApplication().assertIsDispatchThread(); synchronized(LOCK){ if (myOutputPaused) return; if (myDeferredOutput.length() == 0) return; } if (myEditor != null) { final String text = myDeferredOutput.substring(0, myDeferredOutput.length());... | 17306 /local/tlutelli/issta_data/temp/all_java1context/java/2006_temp/2006/17306/b2c98303d8266acfaa2462a108951e78cf7cbaa7/ConsoleViewImpl.java/buggy/execution/impl/com/intellij/execution/impl/ConsoleViewImpl.java | [
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this.jep = jep; | public RpEval(JEP jep) { this.jep = jep; this.opSet = jep.getOperatorSet(); } | 54194 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/54194/5d181473dd1ee3caca86484e98ff7c44ed644489/RpEval.java/buggy/src/org/lsmp/djep/rpe/RpEval.java | [
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