cbct / experiments /logs /03_preprocess.log
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[protocol] preprocessing excludes cases: [8, 9]
preprocess: 0%| | 0/33 [00:00<?, ?it/s] preprocess: 3%|β–Ž | 1/33 [02:11<1:09:54, 131.09s/it] preprocess: 6%|β–Œ | 2/33 [04:18<1:06:44, 129.17s/it] preprocess: 9%|β–‰ | 3/33 [06:02<58:47, 117.58s/it] preprocess: 12%|β–ˆβ– | 4/33 [08:09<58:37, 121.30s/it] preprocess: 15%|β–ˆβ–Œ | 5/33 [10:14<57:07, 122.40s/it] preprocess: 18%|β–ˆβ–Š | 6/33 [12:00<52:34, 116.83s/it] preprocess: 21%|β–ˆβ–ˆ | 7/33 [14:07<52:05, 120.21s/it] preprocess: 24%|β–ˆβ–ˆβ– | 8/33 [16:11<50:33, 121.36s/it] preprocess: 27%|β–ˆβ–ˆβ–‹ | 9/33 [18:18<49:16, 123.18s/it] preprocess: 30%|β–ˆβ–ˆβ–ˆ | 10/33 [19:59<44:40, 116.53s/it] preprocess: 33%|β–ˆβ–ˆβ–ˆβ–Ž | 11/33 [21:10<37:32, 102.37s/it] preprocess: 36%|β–ˆβ–ˆβ–ˆβ–‹ | 12/33 [22:37<34:13, 97.79s/it] preprocess: 39%|β–ˆβ–ˆβ–ˆβ–‰ | 13/33 [24:19<32:58, 98.94s/it] preprocess: 42%|β–ˆβ–ˆβ–ˆβ–ˆβ– | 14/33 [24:43<24:14, 76.53s/it] preprocess: 45%|β–ˆβ–ˆβ–ˆβ–ˆβ–Œ | 15/33 [25:00<17:31, 58.39s/it] preprocess: 48%|β–ˆβ–ˆβ–ˆβ–ˆβ–Š | 16/33 [25:24<13:38, 48.12s/it] preprocess: 52%|β–ˆβ–ˆβ–ˆβ–ˆβ–ˆβ– | 17/33 [26:17<13:15, 49.69s/it] preprocess: 55%|β–ˆβ–ˆβ–ˆβ–ˆβ–ˆβ– | 18/33 [27:13<12:54, 51.64s/it] preprocess: 58%|β–ˆβ–ˆβ–ˆβ–ˆβ–ˆβ–Š | 19/33 [29:17<17:06, 73.35s/it] preprocess: 61%|β–ˆβ–ˆβ–ˆβ–ˆβ–ˆβ–ˆ | 20/33 [31:13<18:40, 86.17s/it] preprocess: 64%|β–ˆβ–ˆβ–ˆβ–ˆβ–ˆβ–ˆβ–Ž | 21/33 [33:19<19:36, 98.02s/it] preprocess: 67%|β–ˆβ–ˆβ–ˆβ–ˆβ–ˆβ–ˆβ–‹ | 22/33 [35:26<19:35, 106.85s/it] preprocess: 70%|β–ˆβ–ˆβ–ˆβ–ˆβ–ˆβ–ˆβ–‰ | 23/33 [37:09<17:36, 105.65s/it] preprocess: 73%|β–ˆβ–ˆβ–ˆβ–ˆβ–ˆβ–ˆβ–ˆβ–Ž | 24/33 [39:22<17:04, 113.80s/it] preprocess: 76%|β–ˆβ–ˆβ–ˆβ–ˆβ–ˆβ–ˆβ–ˆβ–Œ | 25/33 [41:29<15:41, 117.72s/it] preprocess: 79%|β–ˆβ–ˆβ–ˆβ–ˆβ–ˆβ–ˆβ–ˆβ–‰ | 26/33 [43:34<13:59, 119.97s/it] preprocess: 82%|β–ˆβ–ˆβ–ˆβ–ˆβ–ˆβ–ˆβ–ˆβ–ˆβ– | 27/33 [45:44<12:17, 122.91s/it] preprocess: 85%|β–ˆβ–ˆβ–ˆβ–ˆβ–ˆβ–ˆβ–ˆβ–ˆβ– | 28/33 [47:32<09:52, 118.50s/it] preprocess: 88%|β–ˆβ–ˆβ–ˆβ–ˆβ–ˆβ–ˆβ–ˆβ–ˆβ–Š | 29/33 [49:37<08:01, 120.35s/it] preprocess: 91%|β–ˆβ–ˆβ–ˆβ–ˆβ–ˆβ–ˆβ–ˆβ–ˆβ–ˆ | 30/33 [51:27<05:52, 117.36s/it] preprocess: 94%|β–ˆβ–ˆβ–ˆβ–ˆβ–ˆβ–ˆβ–ˆβ–ˆβ–ˆβ–| 31/33 [53:32<03:59, 119.67s/it] preprocess: 97%|β–ˆβ–ˆβ–ˆβ–ˆβ–ˆβ–ˆβ–ˆβ–ˆβ–ˆβ–‹| 32/33 [55:37<02:01, 121.18s/it] preprocess: 100%|β–ˆβ–ˆβ–ˆβ–ˆβ–ˆβ–ˆβ–ˆβ–ˆβ–ˆβ–ˆ| 33/33 [57:21<00:00, 115.87s/it] preprocess: 100%|β–ˆβ–ˆβ–ˆβ–ˆβ–ˆβ–ˆβ–ˆβ–ˆβ–ˆβ–ˆ| 33/33 [57:21<00:00, 104.27s/it]
[preprocess] SKIP 016-: only canal labels, no tooth labels found (drop tooth nii into paths.extra_tooth_dir).
[preprocess] SKIP 017-: only canal labels, no tooth labels found (drop tooth nii into paths.extra_tooth_dir).
[preprocess] SKIP 018-: only canal labels, no tooth labels found (drop tooth nii into paths.extra_tooth_dir).
========== canal<->tooth geometric re-pairing ==========
cases re-paired: 30 | canal components: 749
voxels re-assigned to correct tooth: 616521 | orphaned/dropped: 278104
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