idx int64 0 251k | question stringlengths 53 3.53k | target stringlengths 5 1.23k | len_question int64 20 893 | len_target int64 3 238 |
|---|---|---|---|---|
4,600 | def download_file ( url ) : response = requests . get ( url ) if response . status_code is not 200 : return None return response . text | Downloads a file from the specified URL . | 32 | 9 |
4,601 | def get_sub_dsp ( self , nodes_bunch , edges_bunch = None ) : # Get real paths. nodes_bunch = [ self . get_node ( u ) [ 1 ] [ 0 ] for u in nodes_bunch ] # Define an empty dispatcher. sub_dsp = self . copy_structure ( dmap = self . dmap . subgraph ( nodes_bunch ) . copy ( ) ) # Namespace shortcuts for speed. nodes , dma... | Returns the sub - dispatcher induced by given node and edge bunches . | 479 | 14 |
4,602 | def data_nodes ( self ) : return { k : v for k , v in self . nodes . items ( ) if v [ 'type' ] == 'data' } | Returns all data nodes of the dispatcher . | 38 | 8 |
4,603 | def function_nodes ( self ) : return { k : v for k , v in self . nodes . items ( ) if v [ 'type' ] == 'function' } | Returns all function nodes of the dispatcher . | 38 | 8 |
4,604 | def sub_dsp_nodes ( self ) : return { k : v for k , v in self . nodes . items ( ) if v [ 'type' ] == 'dispatcher' } | Returns all sub - dispatcher nodes of the dispatcher . | 43 | 10 |
4,605 | def blue ( self , memo = None ) : memo = { } if memo is None else memo if self in memo : return memo [ self ] from . utils . dsp import map_list from . utils . blue import BlueDispatcher , _parent_blue memo [ self ] = blue = BlueDispatcher ( executor = self . executor , name = self . name , raises = self . raises , des... | Constructs a BlueDispatcher out of the current object . | 442 | 13 |
4,606 | def extend ( self , * blues , memo = None ) : from . utils . blue import BlueDispatcher as Blue return Blue ( ) . extend ( * blues , memo = memo ) . register ( self , memo = memo ) | Extends Dispatcher calling each deferred operation of given Blueprints . | 49 | 14 |
4,607 | def dispatch ( self , inputs = None , outputs = None , cutoff = None , inputs_dist = None , wildcard = False , no_call = False , shrink = False , rm_unused_nds = False , select_output_kw = None , _wait_in = None , stopper = None , executor = False , sol_name = ( ) ) : dsp = self if not no_call : if shrink : # Pre shrin... | Evaluates the minimum workflow and data outputs of the dispatcher model from given inputs . | 273 | 17 |
4,608 | def shrink_dsp ( self , inputs = None , outputs = None , cutoff = None , inputs_dist = None , wildcard = True ) : bfs = None if inputs : # Get all data nodes no wait inputs. wait_in = self . _get_wait_in ( flag = False ) # Evaluate the workflow graph without invoking functions. o = self . dispatch ( inputs , outputs , ... | Returns a reduced dispatcher . | 439 | 5 |
4,609 | def _get_dsp_from_bfs ( self , outputs , bfs_graphs = None ) : bfs = bfs_graphs [ NONE ] if bfs_graphs is not None else self . dmap # Get sub dispatcher breadth-first-search graph. dsp = self . get_sub_dsp_from_workflow ( sources = outputs , graph = bfs , reverse = True , _update_links = False ) # Namespace shortcuts. ... | Returns the sub - dispatcher induced by the workflow from outputs . | 370 | 12 |
4,610 | def add_callback ( self , method ) : from_actor = get_current ( ) if from_actor is not None : callback = ( method , from_actor . channel , from_actor . url ) with self . __condition : if self . __state is not FINISHED : self . __callbacks . append ( callback ) return # Invoke the callback directly # msg = TellRequest(T... | Attaches a mehtod that will be called when the future finishes . | 164 | 15 |
4,611 | def send_work ( self ) : if self . __set_running ( ) : # msg = FutureRequest(FUTURE, self.__method, self.__params, # self.__channel, self.__target, self.__id) msg = { TYPE : FUTURE , METHOD : self . __method , PARAMS : self . __params , CHANNEL : self . __channel , TO : self . __target , RPC_ID : self . __id } self . _... | Sends the query to the actor for it to start executing the work . | 127 | 15 |
4,612 | def set_result ( self , result ) : with self . __condition : self . __result = result self . __state = FINISHED self . __condition . notify_all ( ) self . _invoke_callbacks ( ) | Sets the return value of work associated with the future . Only called internally . | 49 | 16 |
4,613 | def set_exception ( self , exception ) : with self . __condition : self . __exception = exception self . __state = FINISHED self . __condition . notify_all ( ) self . _invoke_callbacks ( ) | Sets the result of the future as being the given exception . Only called internally . | 51 | 17 |
4,614 | def angle_between_vectors ( x , y ) : dp = dot_product ( x , y ) if dp == 0 : return 0 xm = magnitude ( x ) ym = magnitude ( y ) return math . acos ( dp / ( xm * ym ) ) * ( 180. / math . pi ) | Compute the angle between vector x and y | 72 | 9 |
4,615 | def _ssh_forward_accept ( ssh_session , timeout_ms ) : ssh_channel = c_ssh_forward_accept ( c_void_p ( ssh_session ) , c_int ( timeout_ms ) ) if ssh_channel is None : raise SshTimeoutException ( ) return ssh_channel | Waiting for an incoming connection from a reverse forwarded port . Note that this results in a kernel block until a connection is received . | 67 | 26 |
4,616 | def execute ( self , cmd , block_size = DEFAULT_EXECUTE_READ_BLOCK_SIZE ) : with SshChannel ( self ) as sc : self . __log . debug ( "Executing command: %s" % ( cmd ) ) sc . open_session ( ) sc . request_exec ( cmd ) buffer_ = bytearray ( ) while 1 : bytes = sc . read ( block_size ) yield bytes if len ( bytes ) < block_... | Execute a remote command . This functionality does not support more than one command to be executed on the same channel so we create a dedicated channel at the session level than allowing direct access at the channel level . | 106 | 41 |
4,617 | def _read ( self , directory , filename , session , path , name , extension , spatial , spatialReferenceID , replaceParamFile , force_relative = True ) : self . project_directory = directory with tmp_chdir ( directory ) : # Headers to ignore HEADERS = ( 'GSSHAPROJECT' , ) # WMS Cards to include (don't discount as comme... | Project File Read from File Method | 442 | 6 |
4,618 | def _write ( self , session , openFile , replaceParamFile ) : # Enforce cards that must be written in certain order PRIORITY_CARDS = ( 'WMS' , 'MASK_WATERSHED' , 'REPLACE_LINE' , 'REPLACE_PARAMS' , 'REPLACE_VALS' , 'REPLACE_FOLDER' ) filename = os . path . split ( openFile . name ) [ 1 ] name = filename . split ( '.' )... | Project File Write to File Method | 255 | 6 |
4,619 | def appendDirectory ( self , directory , projectFilePath ) : lines = [ ] with open ( projectFilePath , 'r' ) as original : for l in original : lines . append ( l ) with open ( projectFilePath , 'w' ) as new : for line in lines : card = { } try : card = self . _extractCard ( line ) except : card = self . _extractDirecto... | Append directory to relative paths in project file . By default the project file paths are read and written as relative paths . Use this method to prepend a directory to all the paths in the project file . | 383 | 41 |
4,620 | def readProject ( self , directory , projectFileName , session , spatial = False , spatialReferenceID = None ) : self . project_directory = directory with tmp_chdir ( directory ) : # Add project file to session session . add ( self ) # First read self self . read ( directory , projectFileName , session , spatial = spat... | Read all files for a GSSHA project into the database . | 366 | 13 |
4,621 | def readInput ( self , directory , projectFileName , session , spatial = False , spatialReferenceID = None ) : self . project_directory = directory with tmp_chdir ( directory ) : # Add project file to session session . add ( self ) # Read Project File self . read ( directory , projectFileName , session , spatial , spat... | Read only input files for a GSSHA project into the database . | 251 | 14 |
4,622 | def readOutput ( self , directory , projectFileName , session , spatial = False , spatialReferenceID = None ) : self . project_directory = directory with tmp_chdir ( directory ) : # Add project file to session session . add ( self ) # Read Project File self . read ( directory , projectFileName , session , spatial , spa... | Read only output files for a GSSHA project to the database . | 314 | 14 |
4,623 | def _readXputFile ( self , file_cards , card_name , directory , session , spatial = False , spatialReferenceID = None , replaceParamFile = None , * * kwargs ) : # Automatically derive the spatial reference system, if possible if spatialReferenceID is None : spatialReferenceID = self . _automaticallyDeriveSpatialReferen... | Read specific IO file for a GSSHA project to the database . | 182 | 14 |
4,624 | def writeProject ( self , session , directory , name ) : self . project_directory = directory with tmp_chdir ( directory ) : # Get the batch directory for output batchDirectory = self . _getBatchDirectory ( directory ) # Get param file for writing replaceParamFile = self . replaceParamFile # Write the replacement files... | Write all files for a project from the database to file . | 282 | 12 |
4,625 | def writeInput ( self , session , directory , name ) : self . project_directory = directory with tmp_chdir ( directory ) : # Get param file for writing replaceParamFile = self . replaceParamFile # Write Project File self . write ( session = session , directory = directory , name = name ) # Write input files self . _wri... | Write only input files for a GSSHA project from the database to file . | 152 | 16 |
4,626 | def writeOutput ( self , session , directory , name ) : self . project_directory = directory with tmp_chdir ( directory ) : # Get the batch directory for output batchDirectory = self . _getBatchDirectory ( directory ) # Write the replacement files self . _writeReplacementFiles ( session = session , directory = director... | Write only output files for a GSSHA project from the database to file . | 179 | 16 |
4,627 | def getFileKeys ( self ) : files = self . getFileObjects ( ) files_list = [ ] for key , value in files . iteritems ( ) : if value : files_list . append ( key ) return files_list | Retrieve a list of file keys that have been read into the database . | 51 | 15 |
4,628 | def getFileObjects ( self ) : files = { 'project-file' : self , 'mapping-table-file' : self . mapTableFile , 'channel-input-file' : self . channelInputFile , 'precipitation-file' : self . precipFile , 'storm-pipe-network-file' : self . stormPipeNetworkFile , 'hmet-file' : self . hmetFile , 'nwsrfs-file' : self . nwsrfs... | Retrieve a dictionary of file objects . | 257 | 8 |
4,629 | def getCard ( self , name ) : cards = self . projectCards for card in cards : if card . name . upper ( ) == name . upper ( ) : return card return None | Retrieve card object for given card name . | 40 | 9 |
4,630 | def deleteCard ( self , card_name , db_session ) : card_name = card_name . upper ( ) gssha_card = self . getCard ( card_name ) if gssha_card is not None : db_session . delete ( gssha_card ) db_session . commit ( ) | Removes card from gssha project file | 70 | 9 |
4,631 | def getGridByCard ( self , gssha_card_name ) : with tmp_chdir ( self . project_directory ) : if gssha_card_name not in ( self . INPUT_MAPS + self . WMS_DATASETS ) : raise ValueError ( "Card {0} not found in valid grid cards ..." . format ( gssha_card_name ) ) gssha_grid_card = self . getCard ( gssha_card_name ) if gssh... | Returns GDALGrid object of GSSHA grid | 245 | 10 |
4,632 | def getGrid ( self , use_mask = True ) : grid_card_name = "WATERSHED_MASK" if not use_mask : grid_card_name = "ELEVATION" return self . getGridByCard ( grid_card_name ) | Returns GDALGrid object of GSSHA model bounds | 61 | 11 |
4,633 | def getIndexGrid ( self , name ) : index_map = self . mapTableFile . indexMaps . filter_by ( name = name ) . one ( ) gssha_pro_card = self . getCard ( "#PROJECTION_FILE" ) if gssha_pro_card is None : raise ValueError ( "#PROJECTION_FILE card not found ..." ) with tmp_chdir ( self . project_directory ) : # return gssha ... | Returns GDALGrid object of index map | 134 | 8 |
4,634 | def getWkt ( self ) : gssha_pro_card = self . getCard ( "#PROJECTION_FILE" ) if gssha_pro_card is None : raise ValueError ( "#PROJECTION_FILE card not found ..." ) with tmp_chdir ( self . project_directory ) : gssha_prj_file = gssha_pro_card . value . strip ( '"' ) . strip ( "'" ) with open ( gssha_prj_file ) as pro_fi... | Returns GSSHA projection WKT string | 132 | 8 |
4,635 | def getOutlet ( self ) : # OUTROW, OUTCOL outrow = int ( self . getCard ( name = 'OUTROW' ) . value ) - 1 outcol = int ( self . getCard ( name = 'OUTCOL' ) . value ) - 1 gssha_grid = self . getGrid ( ) return gssha_grid . pixel2lonlat ( outcol , outrow ) | Gets the outlet latitude and longitude . | 91 | 9 |
4,636 | def setOutlet ( self , col , row , outslope = None ) : #OUTROW, OUTCOL, OUTSLOPE gssha_grid = self . getGrid ( ) # col, row = gssha_grid.lonlat2pixel(longitude, latitude) # add 1 to row & col becasue GSSHA is 1-based self . setCard ( name = 'OUTROW' , value = str ( row ) ) self . setCard ( name = 'OUTCOL' , value = str... | Sets the outlet grid cell information in the project file . | 160 | 12 |
4,637 | def findOutlet ( self , shapefile_path ) : # determine outlet from shapefile # by getting outlet from first point in polygon # make sure the boundary geometry is valid check_watershed_boundary_geometry ( shapefile_path ) shapefile = ogr . Open ( shapefile_path ) source_layer = shapefile . GetLayer ( 0 ) source_lyr_proj... | Calculate outlet location | 677 | 5 |
4,638 | def calculateOutletSlope ( self ) : try : mask_grid = self . getGrid ( ) elevation_grid = self . getGrid ( use_mask = False ) outrow = int ( self . getCard ( "OUTROW" ) . value ) - 1 outcol = int ( self . getCard ( "OUTCOL" ) . value ) - 1 cell_size = float ( self . getCard ( "GRIDSIZE" ) . value ) min_row = max ( 0 , ... | Attempt to determine the slope at the OUTLET | 423 | 9 |
4,639 | def timezone ( self ) : if self . _tz is None : # GET CENTROID FROM GSSHA GRID cen_lat , cen_lon = self . centerLatLon ( ) # update time zone tf = TimezoneFinder ( ) tz_name = tf . timezone_at ( lng = cen_lon , lat = cen_lat ) self . _tz = timezone ( tz_name ) return self . _tz | timezone of GSSHA model | 101 | 7 |
4,640 | def _getBatchDirectory ( self , projectRootDirectory ) : # Set output directory to main directory as default batchDirectory = projectRootDirectory # Get the replace folder card replaceFolderCard = self . getCard ( 'REPLACE_FOLDER' ) if replaceFolderCard : replaceDir = replaceFolderCard . value . strip ( '"' ) batchDire... | Check the project file for the REPLACE_FOLDER card . If it exists append it s value to create the batch directory path . This is the directory output is written to when run in batch mode . | 142 | 42 |
4,641 | def _readXput ( self , fileCards , directory , session , spatial = False , spatialReferenceID = 4236 , replaceParamFile = None ) : ## NOTE: This function is dependent on the project file being read first # Read Input/Output Files for card in self . projectCards : if ( card . name in fileCards ) and self . _noneOrNumVal... | GSSHAPY Project Read Files from File Method | 170 | 11 |
4,642 | def _readXputMaps ( self , mapCards , directory , session , spatial = False , spatialReferenceID = 4236 , replaceParamFile = None ) : if self . mapType in self . MAP_TYPES_SUPPORTED : for card in self . projectCards : if ( card . name in mapCards ) and self . _noneOrNumValue ( card . value ) : filename = card . value .... | GSSHA Project Read Map Files from File Method | 315 | 10 |
4,643 | def _readWMSDatasets ( self , datasetCards , directory , session , spatial = False , spatialReferenceID = 4236 ) : if self . mapType in self . MAP_TYPES_SUPPORTED : # Get Mask Map dependency maskMap = session . query ( RasterMapFile ) . filter ( RasterMapFile . projectFile == self ) . filter ( RasterMapFile . fileExten... | Method to handle the special case of WMS Dataset Files . WMS Dataset Files cannot be read in independently as other types of file can . They rely on the Mask Map file for some parameters . | 275 | 43 |
4,644 | def _readBatchOutputForFile ( self , directory , fileIO , filename , session , spatial , spatialReferenceID , replaceParamFile = None , maskMap = None ) : # Get contents of directory directoryList = os . listdir ( directory ) # Compile a list of files with that include the filename in them batchFiles = [ ] for thing in... | When batch mode is run in GSSHA the files of the same type are prepended with an integer to avoid filename conflicts . This will attempt to read files in this format and throw warnings if the files aren t found . | 336 | 45 |
4,645 | def _invokeRead ( self , fileIO , directory , filename , session , spatial = False , spatialReferenceID = 4236 , replaceParamFile = None , * * kwargs ) : path = os . path . join ( directory , filename ) if os . path . isfile ( path ) : instance = fileIO ( ) instance . projectFile = self instance . read ( directory , fi... | Invoke File Read Method on Other Files | 144 | 8 |
4,646 | def _writeXput ( self , session , directory , fileCards , name = None , replaceParamFile = None ) : for card in self . projectCards : if ( card . name in fileCards ) and self . _noneOrNumValue ( card . value ) and fileCards [ card . name ] : fileIO = fileCards [ card . name ] filename = card . value . strip ( '"' ) # C... | GSSHA Project Write Files to File Method | 214 | 9 |
4,647 | def _writeXputMaps ( self , session , directory , mapCards , name = None , replaceParamFile = None ) : if self . mapType in self . MAP_TYPES_SUPPORTED : for card in self . projectCards : if ( card . name in mapCards ) and self . _noneOrNumValue ( card . value ) : filename = card . value . strip ( '"' ) # Determine new ... | GSSHAPY Project Write Map Files to File Method | 312 | 12 |
4,648 | def _writeWMSDatasets ( self , session , directory , wmsDatasetCards , name = None ) : if self . mapType in self . MAP_TYPES_SUPPORTED : for card in self . projectCards : if ( card . name in wmsDatasetCards ) and self . _noneOrNumValue ( card . value ) : filename = card . value . strip ( '"' ) # Determine new filename ... | GSSHAPY Project Write WMS Datasets to File Method | 446 | 15 |
4,649 | def _writeReplacementFiles ( self , session , directory , name ) : if self . replaceParamFile : self . replaceParamFile . write ( session = session , directory = directory , name = name ) if self . replaceValFile : self . replaceValFile . write ( session = session , directory = directory , name = name ) | Write the replacement files | 70 | 4 |
4,650 | def _invokeWrite ( self , fileIO , session , directory , filename , replaceParamFile ) : # Default value for instance instance = None try : # Handle case where fileIO interfaces with single file # Retrieve File using FileIO instance = session . query ( fileIO ) . filter ( fileIO . projectFile == self ) . one ( ) except... | Invoke File Write Method on Other Files | 274 | 8 |
4,651 | def write ( self , originalPrefix , newPrefix = None ) : # Determine number of spaces between card and value for nice alignment numSpaces = max ( 2 , 25 - len ( self . name ) ) # Handle special case of booleans if self . value is None : line = '%s\n' % self . name else : if self . name == 'WMS' : line = '%s %s\n' % ( s... | Write project card to string . | 225 | 6 |
4,652 | def elapsed ( self ) : if not self . started or self . _start_time is None : return 0.0 return self . _timing_data [ - 1 ] [ 0 ] - self . _start_time | Returns the number of seconds it has been since the start until the latest entry . | 47 | 16 |
4,653 | def rate_unstable ( self ) : if not self . started or self . stalled : return 0.0 x1 , y1 = self . _timing_data [ - 2 ] x2 , y2 = self . _timing_data [ - 1 ] return ( y2 - y1 ) / ( x2 - x1 ) | Returns an unstable rate based on the last two entries in the timing data . Less intensive to compute . | 73 | 20 |
4,654 | def rate_overall ( self ) : elapsed = self . elapsed return self . rate if not elapsed else self . numerator / self . elapsed | Returns the overall average rate based on the start time . | 30 | 11 |
4,655 | def _calculate ( self ) : # Calculate means and standard deviations. mean_x = sum ( i [ 0 ] for i in self . _timing_data ) / len ( self . _timing_data ) mean_y = sum ( i [ 1 ] for i in self . _timing_data ) / len ( self . _timing_data ) std_x = sqrt ( sum ( pow ( i [ 0 ] - mean_x , 2 ) for i in self . _timing_data ) / ... | Perform the ETA and rate calculation . | 476 | 9 |
4,656 | def _read ( self , directory , filename , session , path , name , extension , spatial , spatialReferenceID , replaceParamFile ) : # Set file extension property self . fileExtension = extension # Open file and parse into HmetRecords with open ( path , 'r' ) as hmetFile : for line in hmetFile : sline = line . strip ( ) .... | Read HMET WES from File Method | 252 | 8 |
4,657 | def _write ( self , session , openFile , replaceParamFile ) : ## TODO: Ensure Other HMET Formats are supported hmetRecords = self . hmetRecords for record in hmetRecords : openFile . write ( '%s\t%s\t%s\t%s\t%.3f\t%s\t%s\t%s\t%s\t%.2f\t%.2f\n' % ( record . hmetDateTime . year , record . hmetDateTime . month , record . ... | Write HMET WES to File Method | 180 | 8 |
4,658 | def _read ( self , directory , filename , session , path , name , extension , spatial = None , spatialReferenceID = None , replaceParamFile = None ) : yml_events = [ ] with open ( path ) as fo : yml_events = yaml . load ( fo ) for yml_event in yml_events : if os . path . exists ( os . path . join ( directory , yml_even... | ProjectFileEvent Read from File Method | 159 | 7 |
4,659 | def as_yml ( self ) : return YmlFileEvent ( name = str ( self . name ) , subfolder = str ( self . subfolder ) ) | Return yml compatible version of self | 35 | 7 |
4,660 | def prepare_request ( node ) : if node . resource . method not in AVAILABLE_METHODS : raise UnsupportedHTTPMethodError ( node . resource . method ) def request ( data = None , json = None , * * kwargs ) : """ Make request to node's API route with the given keyword arguments """ # validate given query parameters for key... | Prepare request to node s API route | 227 | 8 |
4,661 | def define_plot_data ( data , x_name , * y_names ) : it = [ ] for k in y_names : it . append ( { 'x' : data [ x_name ] , 'y' : data [ k ] , 'name' : k } ) return it | Defines the data to be plotted . | 64 | 8 |
4,662 | def plot_lines ( it ) : data = [ go . Scatter ( mode = 'lines' , * * d ) for d in it ] return py . iplot ( data , filename = 'scatter-mode' ) | Plotting lines . | 48 | 4 |
4,663 | def _ssh_channel_read ( ssh_channel_int , count , is_stderr ) : buffer_ = create_string_buffer ( count ) while 1 : received_bytes = c_ssh_channel_read ( ssh_channel_int , cast ( buffer_ , c_void_p ) , c_uint32 ( count ) , c_int ( int ( is_stderr ) ) ) if received_bytes == SSH_ERROR : ssh_session_int = _ssh_channel_get_... | Do a read on a channel . | 250 | 7 |
4,664 | def eventChunk ( key , lines ) : ## NOTE: RADAR file format not supported currently. ## TODO: Add Support for RADAR file format type values # Contants KEYWORDS = ( 'EVENT' , 'NRPDS' , 'NRGAG' , 'COORD' , 'GAGES' , 'ACCUM' , 'RATES' , 'RADAR' ) NUM_CARDS = ( 'NRPDS' , 'NRGAG' ) VALUE_CARDS = ( 'GAGES' , 'ACCUM' , 'RATES... | Parse EVENT chunks | 558 | 4 |
4,665 | def request ( self , method , path , params = None , headers = None , body = None ) : if not headers : headers = { } if not params : params = { } headers [ "Accept" ] = "application/json" headers [ "Accept-Version" ] = "^1.15.0" if self . auth_token : headers [ "Authorization" ] = "Bearer {0}" . format ( self . auth_to... | Base method for making a Losant API request | 179 | 9 |
4,666 | def flatten_params ( self , data , base_key = None ) : result = { } if data is None : return result map_data = None if not isinstance ( data , collections . Mapping ) : map_data = [ ] for idx , val in enumerate ( data ) : map_data . append ( [ str ( idx ) , val ] ) else : map_data = list ( data . items ( ) ) for key , ... | Flatten out nested arrays and dicts in query params into correct format | 174 | 14 |
4,667 | def read_excel ( input_fpath ) : return { k : v . values for k , v in pd . read_excel ( input_fpath ) . items ( ) } | Reads the excel file . | 42 | 6 |
4,668 | def save_outputs ( outputs , output_fpath ) : df = pd . DataFrame ( outputs ) with pd . ExcelWriter ( output_fpath ) as writer : df . to_excel ( writer ) | Save model outputs in an Excel file . | 48 | 8 |
4,669 | def _read ( self , directory , filename , session , path , name , extension , spatial , spatialReferenceID , replaceParamFile ) : # Set file extension property self . fileExtension = extension # Dictionary of keywords/cards and parse function names KEYWORDS = ( 'EVENT' , ) # Parse file into chunks associated with keywo... | Precipitation Read from File Method | 174 | 8 |
4,670 | def _write ( self , session , openFile , replaceParamFile ) : # Retrieve the events associated with this PrecipFile events = self . precipEvents # Write each event to file for event in events : openFile . write ( 'EVENT "%s"\nNRGAG %s\nNRPDS %s\n' % ( event . description , event . nrGag , event . nrPds ) ) if event . n... | Precipitation File Write to File Method | 598 | 9 |
4,671 | def _createGsshaPyObjects ( self , eventChunk ) : ## TODO: Add Support for RADAR file format type values # Create GSSHAPY PrecipEvent event = PrecipEvent ( description = eventChunk [ 'description' ] , nrGag = eventChunk [ 'nrgag' ] , nrPds = eventChunk [ 'nrpds' ] ) # Associate PrecipEvent with PrecipFile event . preci... | Create GSSHAPY PrecipEvent PrecipValue and PrecipGage Objects Method | 311 | 19 |
4,672 | def lookupSpatialReferenceID ( cls , directory , filename ) : path = os . path . join ( directory , filename ) with open ( path , 'r' ) as f : srid = lookupSpatialReferenceID ( f . read ( ) ) return srid | Look up spatial reference system using the projection file . | 57 | 10 |
4,673 | def _read ( self , directory , filename , session , path , name , extension , spatial , spatialReferenceID , replaceParamFile ) : # Set file extension property self . fileExtension = extension # Open file and parse into a data structure with io_open ( path , 'r' ) as f : self . projection = f . read ( ) | Projection File Read from File Method | 73 | 7 |
4,674 | def _write ( self , session , openFile , replaceParamFile ) : # Write lines openFile . write ( text ( self . projection ) ) | Projection File Write to File Method | 31 | 7 |
4,675 | def numerator ( self , value ) : # If ETA is every iteration, don't do anything fancy. if self . eta_every <= 1 : self . _eta . numerator = value self . _eta_string = self . _generate_eta ( self . _eta . eta_seconds ) return # If ETA is not every iteration, unstable rate is used. If this bar is undefined, no point in c... | Sets a new numerator and generates the ETA . Must be greater than or equal to previous numerator . | 214 | 23 |
4,676 | def rate ( self ) : return float ( self . _eta . rate_unstable if self . eta_every > 1 else self . _eta . rate ) | Returns the rate of the progress as a float . Selects the unstable rate if eta_every > 1 for performance . | 35 | 25 |
4,677 | def generateFromRaster ( self , elevation_raster , shapefile_path = None , out_elevation_grid = None , resample_method = gdalconst . GRA_Average , load_raster_to_db = True ) : if not self . projectFile : raise ValueError ( "Must be connected to project file ..." ) # make sure paths are absolute as the working directory... | Generates an elevation grid for the GSSHA simulation from an elevation raster | 359 | 16 |
4,678 | def _read ( self , directory , filename , session , path , name , extension , spatial , spatialReferenceID , replaceParamFile ) : # Set file extension property self . fileExtension = extension # Dictionary of keywords/cards and parse function names KEYWORDS = { 'CONNECT' : spc . connectChunk , 'SJUNC' : spc . sjuncChun... | Storm Pipe Network File Read from File Method | 293 | 8 |
4,679 | def _write ( self , session , openFile , replaceParamFile ) : # Retrieve Connection objects and write to file connections = self . connections self . _writeConnections ( connections = connections , fileObject = openFile ) # Retrieve SuperJunction objects and write to file sjuncs = self . superJunctions self . _writeSup... | Storm Pipe Network File Write to File Method | 125 | 8 |
4,680 | def _createConnection ( self , connections ) : for c in connections : # Create GSSHAPY Connection object connection = Connection ( slinkNumber = c [ 'slinkNumber' ] , upSjuncNumber = c [ 'upSjunc' ] , downSjuncNumber = c [ 'downSjunc' ] ) # Associate Connection with StormPipeNetworkFile connection . stormPipeNetworkFil... | Create GSSHAPY Connection Objects Method | 91 | 9 |
4,681 | def _createSlink ( self , slinks ) : for slink in slinks : # Create GSSHAPY SuperLink object superLink = SuperLink ( slinkNumber = slink [ 'slinkNumber' ] , numPipes = slink [ 'numPipes' ] ) # Associate SuperLink with StormPipeNetworkFile superLink . stormPipeNetworkFile = self for node in slink [ 'nodes' ] : # Create ... | Create GSSHAPY SuperLink Pipe and SuperNode Objects Method | 388 | 14 |
4,682 | def _createSjunc ( self , sjuncs ) : for sjunc in sjuncs : # Create GSSHAPY SuperJunction object superJunction = SuperJunction ( sjuncNumber = sjunc [ 'sjuncNumber' ] , groundSurfaceElev = sjunc [ 'groundSurfaceElev' ] , invertElev = sjunc [ 'invertElev' ] , manholeSA = sjunc [ 'manholeSA' ] , inletCode = sjunc [ 'inle... | Create GSSHAPY SuperJunction Objects Method | 215 | 11 |
4,683 | def _writeConnections ( self , connections , fileObject ) : for connection in connections : fileObject . write ( 'CONNECT %s %s %s\n' % ( connection . slinkNumber , connection . upSjuncNumber , connection . downSjuncNumber ) ) | Write Connections to File Method | 61 | 6 |
4,684 | def _writeSuperJunctions ( self , superJunctions , fileObject ) : for sjunc in superJunctions : fileObject . write ( 'SJUNC %s %.2f %.2f %.6f %s %s %s %.6f %.6f\n' % ( sjunc . sjuncNumber , sjunc . groundSurfaceElev , sjunc . invertElev , sjunc . manholeSA , sjunc . inletCode , sjunc . linkOrCellI , sjunc . nodeOrCellJ... | Write SuperJunctions to File Method | 150 | 7 |
4,685 | def _writeSuperLinks ( self , superLinks , fileObject ) : for slink in superLinks : fileObject . write ( 'SLINK %s %s\n' % ( slink . slinkNumber , slink . numPipes ) ) for node in slink . superNodes : fileObject . write ( 'NODE %s %.2f %.2f %.6f %s %s %s %.6f %.6f\n' % ( node . nodeNumber , node . groundSurfaceElev , n... | Write SuperLinks to File Method | 263 | 6 |
4,686 | def ziegler_nichols ( self , ku , tu , control_type = 'pid' ) : converter = dict ( p = lambda ku , tu : ( .5 * ku , 0 , 0 ) , pi = lambda ku , tu : ( .45 * ku , 1.2 * ( .45 * ku ) / tu , 0 ) , pd = lambda ku , tu : ( .8 * ku , 0 , ( .8 * ku ) * tu / 8 ) , pid = lambda ku , tu : ( .6 * ku , 2 * ( .6 * ku ) / tu , ( .6 *... | ku = ultimate gain tu = period of oscillation at ultimate gain | 315 | 13 |
4,687 | def datasetHeaderChunk ( key , lines ) : KEYWORDS = ( 'DATASET' , 'OBJTYPE' , 'VECTYPE' , 'BEGSCL' , 'BEGVEC' , 'OBJID' , 'ND' , 'NC' , 'NAME' ) TYPE_KEYS = ( 'BEGSCL' , 'BEGVEC' ) result = { 'type' : None , 'numberData' : None , 'numberCells' : None , 'name' : None , 'objectID' : None , 'objectType' : None , 'vectorTy... | Process the dataset header | 346 | 4 |
4,688 | def datasetScalarTimeStepChunk ( lines , numberColumns , numberCells ) : END_DATASET_TAG = 'ENDDS' # Define the result object result = { 'iStatus' : None , 'timestamp' : None , 'cellArray' : None , 'rasterText' : None } # Split the chunks timeStep = pt . splitLine ( lines . pop ( 0 ) ) # Extract cells, ignoring the sta... | Process the time step chunks for scalar datasets | 394 | 9 |
4,689 | def save_dispatcher ( dsp , path ) : import dill with open ( path , 'wb' ) as f : dill . dump ( dsp , f ) | Write Dispatcher object in Python pickle format . | 38 | 11 |
4,690 | def save_default_values ( dsp , path ) : import dill with open ( path , 'wb' ) as f : dill . dump ( dsp . default_values , f ) | Write Dispatcher default values in Python pickle format . | 42 | 12 |
4,691 | def load_default_values ( dsp , path ) : import dill # noinspection PyArgumentList with open ( path , 'rb' ) as f : dsp . __init__ ( dmap = dsp . dmap , default_values = dill . load ( f ) ) | Load Dispatcher default values in Python pickle format . | 64 | 12 |
4,692 | def save_map ( dsp , path ) : import dill with open ( path , 'wb' ) as f : dill . dump ( dsp . dmap , f ) | Write Dispatcher graph object in Python pickle format . | 39 | 12 |
4,693 | def chunk ( keywords , lines ) : chunks = dict ( ) chunk = [ ] # Create an empty dictionary using all the keywords for keyword in keywords : chunks [ keyword ] = [ ] # Populate dictionary with lists of chunks associated # with the keywords in the list for line in lines : if line . strip ( ) : token = line . split ( ) [... | Divide a file into chunks between key words in the list | 105 | 12 |
4,694 | def valueReadPreprocessor ( valueString , replaceParamsFile = None ) : if type ( valueString ) is bool : log . warning ( "Only numerical variable types can be handled by the valueReadPreprocessor function." ) return valueString # Default processedValue = valueString # Check for replacement variables if replaceParamsFil... | Apply global pre - processing to values during reading throughout the project . | 169 | 13 |
4,695 | def valueWritePreprocessor ( valueString , replaceParamsFile = None ) : if type ( valueString ) is bool : log . warning ( "Only numerical variable types can be handled by the valueReadPreprocessor function." ) return valueString # Default variableString = valueString # Check for replacement variables if replaceParamsFi... | Look up variable name in replace param file for the negative id given and return it . | 160 | 17 |
4,696 | def run ( self , dataset_path ) : features = self . _generate_features ( self . _feature_extractors ) features . to_csv ( dataset_path ) | Run all FeatureExtractors and output results to CSV . | 39 | 12 |
4,697 | def _generate_features ( self , feature_extractors ) : results = [ pd . DataFrame ( ) ] n_ext = len ( feature_extractors ) for i , extractor in enumerate ( feature_extractors ) : log . info ( "generating: '%s' (%d/%d)" , extractor . name , i + 1 , n_ext ) cached_extractor = self . _cache [ extractor . name ] if extract... | Run all FeatureExtractors and record results in a key - value format . | 226 | 16 |
4,698 | def read ( self , directory , filename , session , spatial = False , spatialReferenceID = 4236 , replaceParamFile = None , * * kwargs ) : # Read parameter derivatives path = os . path . join ( directory , filename ) filename_split = filename . split ( '.' ) name = filename_split [ 0 ] # Default file extension extension... | Generic read file into database method . | 221 | 7 |
4,699 | def write ( self , session , directory , name , replaceParamFile = None , * * kwargs ) : # Assemble Path to file name_split = name . split ( '.' ) name = name_split [ 0 ] # Default extension extension = '' if len ( name_split ) >= 2 : extension = name_split [ - 1 ] # Run name preprocessor method if present try : name =... | Write from database back to file . | 209 | 7 |
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