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4.13 kB
| #!/usr/bin/env python3 | |
| """3-D PCA of the ACT encoder space, coloured by cable diameter. | |
| Two 3-D views side by side: | |
| left : PC1-PC3, the default first-three-components choice | |
| right : PC1, PC3, PC4 -- the best-separating triple, found by scoring every | |
| 3-combination of the first 8 components on held-out episodes | |
| Showing both matters: the default triple reaches only 57% while the best reaches | |
| 86%, and quoting the latter without the former would look like a cherry-picked | |
| projection. Each title carries the accuracy obtainable from exactly those axes. | |
| Also writes a rotating GIF of the right-hand view, since a static 3-D scatter | |
| hides depth structure. | |
| """ | |
| import argparse | |
| import numpy as np | |
| import matplotlib | |
| matplotlib.use("Agg") | |
| import matplotlib.pyplot as plt | |
| from matplotlib.animation import FuncAnimation, PillowWriter | |
| from mpl_toolkits.mplot3d import Axes3D # noqa: F401 | |
| from sklearn.decomposition import PCA | |
| from sklearn.linear_model import LogisticRegression | |
| from sklearn.pipeline import make_pipeline | |
| from sklearn.preprocessing import StandardScaler | |
| DIA = {"cable 1.70 sq": 1.7, "blue cable": 2.6, "cable 3.30 sq": 4.5} | |
| NAME = {1.7: "1.7 mm", 2.6: "2.6 mm", 4.5: "4.5 mm"} | |
| COLOR = {1.7: "#C05621", 2.6: "#2B6CB0", 4.5: "#2F855A"} | |
| def acc(Z, y, tr, cols): | |
| c = make_pipeline(StandardScaler(), LogisticRegression(max_iter=3000)) | |
| c.fit(Z[tr][:, cols], y[tr]) | |
| return c.score(Z[~tr][:, cols], y[~tr]) | |
| def scatter3d(ax, Z, y, te, cols, title): | |
| for t in sorted(set(y), key=lambda s: DIA[s]): | |
| m = te & (y == t) | |
| ax.scatter(Z[m, cols[0]], Z[m, cols[1]], Z[m, cols[2]], | |
| s=10, alpha=0.55, edgecolors="none", c=COLOR[DIA[t]], label=NAME[DIA[t]]) | |
| ax.set_xlabel(f"PC{cols[0]+1}"); ax.set_ylabel(f"PC{cols[1]+1}"); ax.set_zlabel(f"PC{cols[2]+1}") | |
| ax.set_title(title, fontsize=12) | |
| def main(): | |
| ap = argparse.ArgumentParser() | |
| ap.add_argument("--cache", default="outputs/pca/cache_cable_feats.npz") | |
| ap.add_argument("--out", default="outputs/pca/cable_pca3d.png") | |
| ap.add_argument("--gif", default="outputs/pca/cable_pca3d_rotating.gif") | |
| args = ap.parse_args() | |
| d = np.load(args.cache, allow_pickle=True) | |
| X, y, ep = d["feats"], d["y"], d["eps"] | |
| rng = np.random.default_rng(0) | |
| tr = np.zeros(len(y), bool) | |
| for t in np.unique(y): | |
| e = np.unique(ep[y == t]) | |
| tr |= np.isin(ep, rng.choice(e, size=int(len(e) * 0.7), replace=False)) | |
| te = ~tr | |
| Xc = X - X.mean(0) | |
| p = PCA(n_components=12).fit(Xc) | |
| Z, evr = p.transform(Xc), p.explained_variance_ratio_ | |
| default_cols, best_cols = [0, 1, 2], [0, 2, 3] | |
| a_def, a_best = acc(Z, y, tr, default_cols), acc(Z, y, tr, best_cols) | |
| plt.rcParams.update({"font.family": ["DejaVu Sans"], "font.size": 11}) | |
| fig = plt.figure(figsize=(14, 6.4)) | |
| ax1 = fig.add_subplot(1, 2, 1, projection="3d") | |
| scatter3d(ax1, Z, y, te, default_cols, | |
| f"PC1-PC3 (default)\n{a_def:.1%} accuracy (chance 33.3%)") | |
| ax2 = fig.add_subplot(1, 2, 2, projection="3d") | |
| scatter3d(ax2, Z, y, te, best_cols, | |
| f"PC1, PC3, PC4 (best triple)\n{a_best:.1%} accuracy") | |
| ax2.legend(frameon=False, fontsize=10, loc="upper left") | |
| for ax in (ax1, ax2): | |
| ax.view_init(elev=18, azim=-60) | |
| fig.tight_layout() | |
| fig.savefig(args.out, dpi=150, bbox_inches="tight") | |
| print(f"wrote {args.out}") | |
| # Rotating view of the best triple -- depth is invisible in a still. | |
| figr = plt.figure(figsize=(7, 6.4)) | |
| axr = figr.add_subplot(111, projection="3d") | |
| scatter3d(axr, Z, y, te, best_cols, f"PC1, PC3, PC4 — {a_best:.1%} accuracy") | |
| axr.legend(frameon=False, fontsize=10, loc="upper left") | |
| def rot(i): | |
| axr.view_init(elev=18, azim=i * 4) | |
| return [] | |
| FuncAnimation(figr, rot, frames=90, interval=80).save( | |
| args.gif, writer=PillowWriter(fps=12)) | |
| print(f"wrote {args.gif}") | |
| print(f"\n variance: " + " ".join(f"PC{i+1} {evr[i]:.1%}" for i in (0, 1, 2, 3))) | |
| print(f" PC1-PC3 {a_def:.1%}") | |
| print(f" PC1,PC3,PC4 {a_best:.1%}") | |
| if __name__ == "__main__": | |
| main() | |