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45.7 kB
| """CHEM-113 SurPASS3 finite electrolyte, pressure decay, streaming current and pH titration.""" | |
| from pathlib import Path | |
| import copy,math,json,importlib.util | |
| PROTOCOL_VERSION='1.0.0';SLUG='antonpaar_surpass3';CATALOG_ID='CHEM-113';ASSET_TYPE_ID='instrument.'+SLUG | |
| ROOT=Path(__file__).resolve().parents[2];ASSET=ROOT/'assets/expansion_batch03/t4_measure'/SLUG | |
| class ActionRejected(ValueError):pass | |
| def number(unit='1',lo=None,hi=None): | |
| d={'type':'number','x-unit':unit} | |
| if lo is not None:d['minimum']=lo | |
| if hi is not None:d['maximum']=hi | |
| return d | |
| def obj(p):return dict(type='object',properties=p,required=list(p),additionalProperties=False) | |
| def arr(v,n=None): | |
| d=dict(type='array',items=v) | |
| if n is not None:d.update(minItems=n,maxItems=n) | |
| return d | |
| def nullable(s):return {'anyOf':[s,{'type':'null'}]} | |
| def enum(v):return {'type':'string','enum':v} | |
| TEXT={'type':'string'};BOOL={'type':'boolean'};PHASE=enum(['idle','running','succeeded','cancelled','failed']) | |
| def validate(s,v): | |
| if 'anyOf' in s: | |
| for q in s['anyOf']: | |
| try:validate(q,v);return | |
| except ActionRejected:pass | |
| raise ActionRejected('INVALID_ARGUMENT') | |
| t=s.get('type') | |
| if t in ('number','integer'): | |
| if isinstance(v,bool) or not isinstance(v,(int,float)) or not math.isfinite(v) or (t=='integer' and type(v) is not int) or not s.get('minimum',-math.inf)<=v<=s.get('maximum',math.inf):raise ActionRejected('INVALID_ARGUMENT') | |
| elif t=='boolean' and type(v) is not bool:raise ActionRejected('INVALID_ARGUMENT') | |
| elif t=='string' and not isinstance(v,str):raise ActionRejected('INVALID_ARGUMENT') | |
| elif t=='null' and v is not None:raise ActionRejected('INVALID_ARGUMENT') | |
| elif t=='object': | |
| if not isinstance(v,dict) or not set(s.get('required',[]))<=v.keys() or set(v)-set(s['properties']):raise ActionRejected('INVALID_ARGUMENT') | |
| for k,x in v.items():validate(s['properties'][k],x) | |
| elif t=='array': | |
| if not isinstance(v,list) or not s.get('minItems',0)<=len(v)<=s.get('maxItems',math.inf):raise ActionRejected('INVALID_ARGUMENT') | |
| for x in v:validate(s['items'],x) | |
| if 'enum' in s and v not in s['enum']:raise ActionRejected('INVALID_ARGUMENT') | |
| DT=.1;EPS0=8.8541878128e-12 | |
| PLANT=obj({'temperature_k':number('K',293.15,313.15),'viscosity_pa_s':number('Pa*s',.0005,.002),'relative_permittivity':number('1',60,90),'kw_mol2_m6':number('mol^2/m^6',1e-9,1e-7),'molar_conductivities':arr(number('S*m^2/mol',.001,.1),4),'ambient_pa':number('Pa',8e4,12e4),'gas_volume_m3':number('m^3',1e-5,.0001),'extra_resistance_pa_s_m3':number('Pa*s/m^3',0,1e13),'surface_conductance_s':number('S',0,.01),'dose_flow_m3_s':number('m^3/s',1e-10,1e-7),'ph_slope_v':number('V',-.0615,-.0568),'ph_offset_v':number('V',-.03,.03),'conductivity_gain':number('1',.5,2),'voltage_offset_v':number('V',-.1,.1),'current_offset_a':number('A',-1e-5,1e-5),'voltage_gain':number('1',.5,2),'current_gain':number('1',.5,2),'blocked_fraction':number('1',0,1),'accept_engineering_model':BOOL}) | |
| PLANT_EXAMPLE=dict(temperature_k=298.15,viscosity_pa_s=.000890,relative_permittivity=78.3,kw_mol2_m6=1e-8,molar_conductivities=[.00693,.00720,.034965,.0198],ambient_pa=101325.,gas_volume_m3=5e-5,extra_resistance_pa_s_m3=0.,surface_conductance_s=0.,dose_flow_m3_s=1e-8,ph_slope_v=-.05916,ph_offset_v=0.,conductivity_gain=1.,voltage_offset_v=0.,current_offset_a=0.,voltage_gain=1.,current_gain=1.,blocked_fraction=0.,accept_engineering_model=True) | |
| METHOD=obj({'ph_targets':dict(arr(number('1',2,12)),minItems=1,maxItems=30),'start_pressure_pa':number('Pa',1000,120000),'stop_pressure_pa':number('Pa',500,119000),'cycles':dict(number('1',1,5),type='integer'),'fill_volume_m3':number('m^3',2e-5,.0001),'mode':enum(['zeta','rinse']),'ramp_timeout_s':number('s',10,600)}) | |
| METHOD_EXAMPLE=dict(ph_targets=[6.,5.,4.,3.],start_pressure_pa=60000.,stop_pressure_pa=20000.,cycles=2,fill_volume_m3=.0001,mode='zeta',ramp_timeout_s=120.) | |
| LIQUID=obj({'volume_m3':number('m^3',1e-5,.00025),'kcl_mol_m3':number('mol/m^3',.01,60),'initial_ph':number('1',2,12),'acid_stock_m3':number('m^3',0,.001),'base_stock_m3':number('m^3',0,.001),'titrant_mol_m3':number('mol/m^3',1,1000)}) | |
| LIQUID_EXAMPLE=dict(volume_m3=.0002,kcl_mol_m3=10.,initial_ph=6.,acid_stock_m3=1e-5,base_stock_m3=1e-5,titrant_mol_m3=50.) | |
| SAMPLE=obj({'sample_id':TEXT,'reference_id':TEXT,'ph_slope_v':number('V',-.05,.05),'accept_geometry_transfer':BOOL,'accept_ph_extrapolation':BOOL,'accept_electrolyte_mismatch':BOOL});SAMPLE['required']=[k for k in SAMPLE['required'] if k!='accept_electrolyte_mismatch'] | |
| SAMPLE_EXAMPLE=dict(sample_id='private_cotton_equivalent',reference_id='cotton_agcl',ph_slope_v=-.01,accept_geometry_transfer=True,accept_ph_extrapolation=True) | |
| # Response modes of macroscopic library records (zeta_library.json runtime_mode). The legacy manufacturer cotton point keeps | |
| # its original behaviour; literature records carry their own electrolyte and real anchor points. | |
| LEGACY_MODE='manufacturer_point_host_slope';CURVE_MODES=('measured_curve','anchor_curve');SLOPE_MODES=('iep_host_slope','point_host_slope') | |
| RUNTIME_MODES=(LEGACY_MODE,)+CURVE_MODES+SLOPE_MODES | |
| def reference_zeta(ref,ph,slope_v): | |
| """Reference zeta (V) of a library record at true pH; curve modes interpolate real points, slope modes use the host slope.""" | |
| mode=ref.get('runtime_mode',LEGACY_MODE) | |
| if mode in CURVE_MODES: | |
| xs=ref['curve']['ph'];ys=ref['curve']['zeta_v'] | |
| # Outside the published span: constant end value (plateau), except beyond an IEP end anchor (zeta=0), where the | |
| # adjacent segment is continued linearly so the sign change at the published IEP is kept (explicit assumption). | |
| if ph<=xs[0]:return (ys[1]-ys[0])/(xs[1]-xs[0])*(ph-xs[0]) if ys[0]==0 and len(xs)>1 else ys[0] | |
| if ph>=xs[-1]:return (ys[-1]-ys[-2])/(xs[-1]-xs[-2])*(ph-xs[-1]) if ys[-1]==0 and len(xs)>1 else ys[-1] | |
| for (a,u),(b,v) in zip(zip(xs,ys),zip(xs[1:],ys[1:])): | |
| if a<=ph<=b:return u+(v-u)*(ph-a)/(b-a) | |
| if mode=='iep_host_slope':return slope_v*(ph-ref['iep_ph']) | |
| return ref['zeta_v']+slope_v*(ph-ref['ph']) | |
| PHCAL=obj({'buffer_ph':arr(number('1',2,12),2),'measured_v':arr(number('V',-1,1),2)}) | |
| PHCAL_EXAMPLE=dict(buffer_ph=[4.,7.],measured_v=[-.23664,-.41412]) | |
| COND=obj({'reference_s_m':number('S/m',.0001,1.),'indicated_s_m':number('S/m',.0001,2.)}) | |
| COND_EXAMPLE=dict(reference_s_m=.1413,indicated_s_m=.1413) | |
| POINT=obj({'time_s':number('s',0),'pressure_pa':number('Pa'),'flow_m3_s':number('m^3/s'),'streaming_v':number('V',-2,2),'streaming_a':number('A',-.002,.002),'ph':number('1',2,12),'conductivity_s_m':number('S/m',.0001,1),'direction':dict(number('1',-1,1),type='integer')}) | |
| FIT=obj({'ph':number('1'),'slope_v_pa':number('V/Pa'),'slope_a_pa':number('A/Pa'),'zeta_from_v_v':number('V'),'zeta_from_i_v':number('V'),'r2_v':number('1'),'r2_i':number('1'),'samples':dict(number('1',2),type='integer')}) | |
| RESULT=obj({'phase':PHASE,'stage':TEXT,'elapsed_s':number('s',0),'trace':arr(POINT),'fits':arr(FIT),'iep_ph':nullable(number('1',2,12)),'quality':TEXT,'template_source':TEXT,'warnings':arr(TEXT)}) | |
| LEDGER=obj({'liquid_volume_m3':number('m^3',0),'loaded_volume_m3':number('m^3',0),'acid_added_m3':number('m^3',0),'base_added_m3':number('m^3',0),'returned_volume_m3':number('m^3',0),'volume_residual_m3':number('m^3'),'k_residual_mol':number('mol'),'cl_residual_mol':number('mol'),'electroneutral_residual_mol':number('mol'),'acid_stock_m3':number('m^3',0),'base_stock_m3':number('m^3',0),'acid_syringe_m3':number('m^3',0),'base_syringe_m3':number('m^3',0),'titrant_residual_m3':number('m^3'),'gas_pressure_pa':number('Pa',0),'gas_mole_residual':number('mol'),'pneumatic_work_j':number('J',0),'hydraulic_dissipation_j':number('J',0),'work_residual_j':number('J'),'circulated_m3':number('m^3',0)}) | |
| CAPS={};SLOTS={};SLOT_ZH={} | |
| def cap(k,i,o,c,z,kind='device_command',vis='agent',ex=None,effects=None):CAPS[k]=(i,o,c,z,kind,vis,ex or {},effects or []) | |
| def slot(k,s,u,z,o='derived',v='agent',c='controller',w=None):SLOTS[k]=(s,u,o,v,[c],w);SLOT_ZH[k]=z | |
| cap('plant.configure',PLANT,obj({'configured':BOOL}),['controller'],'初始化水物性、有限气室和显式误差系数','configuration','evaluator',PLANT_EXAMPLE,['plant.configured']) | |
| cap('method.configure',METHOD,obj({'configured':BOOL}),['controller'],'压力下降扫描、反向循环与pH目标序列','configuration',ex=METHOD_EXAMPLE,effects=['method.configured']) | |
| cap('power.set',obj({'enabled':BOOL}),obj({'enabled':BOOL}),['controller','power_switch','power_lamp'],'开关电源;断电停止并泄压,保留液体',ex={'enabled':True},effects=['power.enabled','power.angle_rad']) | |
| for name,part,arg,lo,hi in [('cell','cell_carriage','withdrawal_m',0.,.095),('gap','gap_jaw','height_m',.00002,.0003),('lock','cell_lock','angle_rad',0.,1.2),('lid','beaker_lid','lift_m',0.,.105)]: | |
| u='rad' if name=='lock' else 'm';cap(name+'.set',obj({arg:number(u,lo,hi)}),obj({arg:number(u,lo,hi)}),[part],'受检人工机构动作',ex={arg:hi},effects=[name+'.'+arg]);slot(name+'.'+arg,number(u,lo,hi),u,'人工设定的'+name+'机构位置','scene',c=part,w=(name+'.set',arg)) | |
| cap('sample.load',SAMPLE,obj({'loaded':BOOL}),['sample_lower','sample_upper'],'可信装样;按reference_id选用宏观表面参考(厂家棉布点、文献实测ζ–pH点、文献IEP/单点锚定),文献表面转入平板模型、pH外推与电解液不一致须明确接受;纳米颗粒电泳记录禁止装载','configuration','evaluator',SAMPLE_EXAMPLE,['sample.loaded']) | |
| cap('sample.unload',obj({}),obj({'unloaded':BOOL}),['sample_lower','sample_upper'],'退回完整固体试片,不消耗样品',vis='evaluator',effects=['sample.loaded']) | |
| cap('electrolyte.load',LIQUID,obj({'loaded':BOOL}),['beaker_wall','acid_bottle','base_bottle'],'有限KCl/酸碱库存装载','configuration','evaluator',LIQUID_EXAMPLE,['electrolyte.loaded']) | |
| cap('electrolyte.drain',obj({}),obj({'volume_m3':number('m^3',0),'potassium_mol':number('mol',0),'chloride_mol':number('mol',0)}),['beaker_wall'],'可信宿主领取全部有限残液;保留酸碱库存',vis='evaluator',effects=['electrolyte.loaded']) | |
| cap('ph.calibrate',PHCAL,obj({'slope_v':number('V'),'offset_v':number('V')}),['ph_probe'],'根据两点真实输入标定pH读数;不宣称实机校准','configuration',ex=PHCAL_EXAMPLE,effects=['ph.calibrated']) | |
| cap('conductivity.calibrate',COND,obj({'factor':number('1',0)}),['conductivity_probe'],'单点电导比例校正','configuration',ex=COND_EXAMPLE,effects=['conductivity.calibrated']) | |
| cap('acquisition.start',obj({}),obj({'operation_id':TEXT,'phase':PHASE}),['controller','acid_piston','base_piston','hydraulic_module'],'有限滴定→填充→正反压差下降扫描→拟合ζ与过零IEP',effects=['acquisition.phase','acquisition.stage']) | |
| cap('acquisition.stop',obj({}),obj({'phase':PHASE}),['controller'],'取消保留滴定效果与已得数据,内部液体返杯并泄压',effects=['acquisition.phase']) | |
| cap('process.measure',obj({}),RESULT,['controller'],'返回理想/显式偏置传感器曲线与拟合ζ;不返回样品真值','query') | |
| cap('ledger.read',obj({}),LEDGER,['beaker_wall','hydraulic_module'],'体积、K/Cl、电中性及气体/流动功账本','query','evaluator') | |
| cap('template.reference',obj({'substance_id':TEXT}),obj({'name':TEXT,'zeta_v':number('V'),'ph':nullable(number('1')),'iep_ph':nullable(number('1')),'runtime_mode':TEXT,'electrolyte':TEXT,'measurement_method':TEXT,'curve_points':dict(number('1',0),type='integer'),'evidence':TEXT,'template_source':TEXT,'applicable_to_surpass':BOOL,'limitations':TEXT}),['controller'],'只读公开参考,不推进时间','query',ex={'substance_id':'cotton_agcl'}) | |
| cap('template.list',obj({}),obj({'references':arr(obj({'substance_id':TEXT,'name':TEXT,'material_class':TEXT,'runtime_mode':TEXT,'surface_identity':TEXT}))}),['controller'],'列出可装载的宏观表面参考(不含纳米颗粒/仅参考记录),不推进时间','query') | |
| UNSUPPORTED={'hardware.connect','adsorption.kinetics','cell.cylindrical','cell.other_geometries','pressure.external','thermal.control','fault.probability_model'} | |
| for k in sorted(UNSUPPORTED):cap(k,obj({}),obj({}),['controller'],'该配置/功能尚未实现') | |
| for k in ['plant','method']:slot(k+'.configured',BOOL,'1',k+'已配置','setpoint') | |
| slot('power.enabled',BOOL,'1','逻辑电源','setpoint',w=('power.set','enabled'));slot('power.angle_rad',number('rad',0,.2),'rad','电源跷板角度','scene',c='power_switch') | |
| for k in ['acid','base']:slot(k+'.stroke_m',number('m',0,.05),'m','1mL注射器活塞位置,体积/2e-5m2的几何代理','scene',c=k+'_piston') | |
| for k in ['sample.loaded','electrolyte.loaded','ph.calibrated','conductivity.calibrated']:slot(k,BOOL,'1',k+'状态') | |
| slot('sample.identity',TEXT,'1','私有固体试片身份','process_truth','evaluator');slot('electrolyte.ph_truth',nullable(number('1')),'1','真实理想电荷平衡pH','process_truth','evaluator');slot('electrolyte.volume_m3',number('m^3',0),'m^3','有限内部液体及杯内总量','process_truth','evaluator') | |
| for k,s,u,z in [('ph.indicated',nullable(number('1')),'1','两点校正pH'),('conductivity.indicated_s_m',nullable(number('S/m',0)),'S/m','单点校正电导'),('pressure.indicated_pa',number('Pa'),'Pa','测量池有符号压差'),('streaming.indicated_v',number('V',-2,2),'V','流动电位理想加偏置读数'),('streaming.indicated_a',number('A',-.002,.002),'A','流动电流理想加偏置读数'),('temperature.indicated_k',number('K',293.15,313.15),'K','宿主恒定温度理想读数')]:slot(k,s,u,z,'sensor') | |
| slot('acquisition.phase',PHASE,'1','异步状态');slot('acquisition.stage',TEXT,'1','滴定/填充/压力下降扫描阶段');slot('acquisition.elapsed_s',number('s',0),'s','本轮推进时间');slot('acquisition.failure',TEXT,'1','失败码');slot('result.zeta_v',nullable(number('V')),'V','流动电流斜率得到ζ推断');slot('result.iep_ph',nullable(number('1',2,12)),'1','仅已测pH点包围零点时线性插值IEP') | |
| class AntonpaarSurpass3Runtime: | |
| def __init__(self,instance_id='surpass3_01'): | |
| self.instance_id=instance_id;self.time_s=0.;self.pending=0.;self.revision=0;self.plant=None;self.method=None;self.powered=False;self.cell=0.;self.gap=.0001;self.lock=1.2;self.lid=0.;self.sample=None;self.liquid=None;self.V=0.;self.nk=0.;self.ncl=0.;self.loaded_v=0.;self.loaded_k=0.;self.loaded_cl=0.;self.acid=0.;self.base=0.;self.syringe=[0.,0.];self.refilling=None;self.titrant_initial=0.;self.added=[0.,0.];self.returned_v=0.;self.returned_k=0.;self.returned_cl=0.;self.stock_c=50.;self.cal_ph=None;self.cal_cond=None;self.phase='idle';self.stage='idle';self.elapsed=0.;self.stage_time=0.;self.trace=[];self.fits=[];self.fit_rows=[];self.target_idx=0;self.cycle=0;self.direction=1;self.pressure=0.;self.cell_pressure=0.;self.flow=0.;self.voltage=0.;self.current=0.;self.gas_n=0.;self.gas_initial_n=0.;self.gas_v=0.;self.moved=0.;self.chamber=[0.,0.];self.work=0.;self.dissipation=0.;self.circulated=0.;self.failure='';self.serial=0;self.operation_id=None;self.records={};self._principals={};self._owners={};self._requests={};self.library=json.loads((ASSET/'zeta_library.json').read_text()) | |
| def register_principal(self,principal_id,visibility='agent'): | |
| if visibility not in ['agent','debug','evaluator'] or principal_id in self._principals:raise ActionRejected('REQUEST_CONFLICT') | |
| self._principals[principal_id]=visibility | |
| def session(self,principal_id): | |
| if principal_id not in self._principals:raise ActionRejected('ACCESS_DENIED') | |
| return AntonpaarSurpass3Session(self,principal_id) | |
| def describe(self):return export_antonpaar_surpass3_contract_metadata() | |
| def chemistry(self): | |
| if not self.V or not self.plant:return None,None,None | |
| d=(self.ncl-self.nk)/self.V;kw=self.plant['kw_mol2_m6'];root=math.sqrt(d*d+4*kw);h=(d+root)/2 if d>=0 else 2*kw/(root-d);oh=kw/h;ph=-math.log10(h/1000);l=self.plant['molar_conductivities'];k=l[0]*self.nk/self.V+l[1]*self.ncl/self.V+l[2]*h+l[3]*oh;return ph,k,(h,oh) | |
| def indicated(self): | |
| ph,k,_=self.chemistry() | |
| if ph is None:return None,None | |
| p=self.plant;ep=p['ph_offset_v']+p['ph_slope_v']*ph;return ((ep-self.cal_ph[1])/self.cal_ph[0] if self.cal_ph else None,k*p['conductivity_gain']*self.cal_cond if self.cal_cond else None) | |
| def read(self,visibility='agent'): | |
| ph,k=self.indicated();d={'plant.configured':bool(self.plant),'method.configured':bool(self.method),'power.enabled':self.powered,'power.angle_rad':.2 if self.powered else 0.,'cell.withdrawal_m':self.cell,'gap.height_m':self.gap,'lock.angle_rad':self.lock,'lid.lift_m':self.lid,'acid.stroke_m':self.syringe[0]/2e-5,'base.stroke_m':self.syringe[1]/2e-5,'sample.loaded':bool(self.sample),'electrolyte.loaded':self.V>0,'ph.calibrated':bool(self.cal_ph),'conductivity.calibrated':self.cal_cond is not None,'sample.identity':self.sample['sample_id'] if self.sample else '', 'electrolyte.ph_truth':self.chemistry()[0],'electrolyte.volume_m3':self.V,'ph.indicated':ph,'conductivity.indicated_s_m':k,'pressure.indicated_pa':self.cell_pressure*self.direction,'streaming.indicated_v':self.voltage,'streaming.indicated_a':self.current,'temperature.indicated_k':self.plant['temperature_k'] if self.plant else 298.15,'acquisition.phase':self.phase,'acquisition.stage':self.stage,'acquisition.elapsed_s':self.elapsed,'acquisition.failure':self.failure,'result.zeta_v':self.fits[-1]['zeta_from_i_v'] if self.fits else None,'result.iep_ph':self._iep()};return copy.deepcopy({k:v for k,v in d.items() if visibility!='agent' or SLOTS[k][3]=='agent'}) | |
| def _iep(self): | |
| if not self.fits:return None | |
| points={round(f['ph'],6):[] for f in self.fits} | |
| for f in self.fits:points[round(f['ph'],6)].append(f['zeta_from_i_v']) | |
| data=sorted((p,sum(v)/len(v)) for p,v in points.items()) | |
| for p,z in data: | |
| if abs(z)<1e-12:return p | |
| for (a,x),(b,y) in zip(data,data[1:]): | |
| if x*y<0:return a-x*(b-a)/(y-x) | |
| return None | |
| def _ref(self):return self.library['substances'][self.sample['reference_id']] if self.sample else None | |
| def _template_text(self): | |
| r=self._ref();mode=r.get('runtime_mode',LEGACY_MODE) if r else LEGACY_MODE | |
| if r is None or mode==LEGACY_MODE:return 'AntonPaar D85IB016EN-F p25 cotton verification reference; pH slope and geometry transfer explicit assumptions',['Cotton manufacturer point uses a host-assumed pH slope; nanoparticle electrophoretic records are reference-only','pH response slope, pressure compliance and hydraulic resistance are assumptions','No calibrated noise/real measurement uncertainty; voltage zeta biased by surface conductance','No adsorption chemistry, CO2, activities, thermal feedback or real seal contact'] | |
| s=r['source'];e=r['electrolyte'];text=f"{r['name']} [{r['substance_id']}]; {mode}; {r['measurement_method']} in {e.get('salt')} {e.get('concentration_mol_m3')} mol/m3; {s.get('doi') or s.get('url')} {s.get('locator','')}" | |
| w={'measured_curve':'Reference zeta(pH) = piecewise-linear interpolation of published measured points; constant end values outside the measured pH range (plateau assumption)','anchor_curve':'Reference zeta(pH) = piecewise-linear curve through the published IEP (zeta=0) and published zeta points (derived); outside the anchor span constant end values, or linear continuation of the end segment beyond an IEP end anchor','iep_host_slope':'Only the published IEP is real; zeta(pH)=host_slope*(pH-IEP) is an explicit host assumption','point_host_slope':'Only one published zeta point is real; zeta(pH)=zeta_ref+host_slope*(pH-pH_ref) is an explicit host assumption'}[mode] | |
| warn=[w,'Literature surface transferred to the modelled planar slit; no native SurPASS 3 measurement of this sample'] | |
| if r.get('measurement_method','')!='streaming_potential' and r.get('measurement_method','')!='streaming_current':warn.append('Reference measured by '+r.get('measurement_method','')+', not by streaming potential/current') | |
| if self.sample.get('accept_electrolyte_mismatch'):warn.append('Electrolyte mismatch accepted by host; no ionic-strength or ion-specific correction applied') | |
| return text,warn+['Pressure compliance and hydraulic resistance are assumptions; no calibrated noise; voltage zeta biased by surface conductance','No adsorption chemistry, CO2, activities, thermal feedback or real seal contact'] | |
| def _result(self): | |
| src,warn=self._template_text();return dict(phase=self.phase,stage=self.stage,elapsed_s=self.elapsed,trace=copy.deepcopy(self.trace),fits=copy.deepcopy(self.fits),iep_ph=self._iep(),quality='engineering_model_with_explicit_sensor_bias',template_source=src,warnings=warn) | |
| def _ledger(self): | |
| ph,k,ho=self.chemistry();kw=self.plant['kw_mol2_m6'] if self.plant else 1e-8;charge=0 if ho is None else self.nk+ho[0]*self.V-self.ncl-ho[1]*self.V | |
| return dict(liquid_volume_m3=self.V,loaded_volume_m3=self.loaded_v,acid_added_m3=self.added[0],base_added_m3=self.added[1],returned_volume_m3=self.returned_v,volume_residual_m3=self.loaded_v+sum(self.added)-self.V-self.returned_v,k_residual_mol=self.loaded_k+self.added[1]*self.stock_c-self.nk-self.returned_k,cl_residual_mol=self.loaded_cl+self.added[0]*self.stock_c-self.ncl-self.returned_cl,electroneutral_residual_mol=charge,acid_stock_m3=self.acid,base_stock_m3=self.base,acid_syringe_m3=self.syringe[0],base_syringe_m3=self.syringe[1],titrant_residual_m3=self.titrant_initial-self.acid-self.base-sum(self.syringe)-sum(self.added),gas_pressure_pa=self.pressure,gas_mole_residual=(self.gas_initial_n-(self.pressure+self.plant['ambient_pa'])*(self.gas_v+self.moved)/(8.314462618*self.plant['temperature_k'])) if self.gas_n else 0.,pneumatic_work_j=self.work,hydraulic_dissipation_j=self.dissipation,work_residual_j=self.work-self.dissipation,circulated_m3=self.circulated) | |
| def invoke(self,k,**a): | |
| if k not in CAPS:raise ActionRejected('UNKNOWN_CAPABILITY') | |
| if k in UNSUPPORTED:raise ActionRejected('UNSUPPORTED') | |
| validate(CAPS[k][0],a);before=copy.deepcopy({x:v for x,v in self.__dict__.items() if x!='library'}) | |
| try: | |
| v=self._invoke(k,a);validate(CAPS[k][1],v) | |
| if CAPS[k][4] not in ['query','analysis']:self.revision+=1 | |
| return v | |
| except Exception: | |
| lib=self.library;self.__dict__.clear();self.__dict__.update(before);self.library=lib;raise | |
| def _invoke(self,k,a): | |
| if k=='process.measure':return self._result() | |
| if k=='ledger.read':return self._ledger() | |
| if k=='template.reference': | |
| r=self.library['substances'].get(a['substance_id']) | |
| if r is None:raise ActionRejected('UNKNOWN_REFERENCE') | |
| e=r.get('electrolyte') or {};s=r['source'] | |
| return {**{x:r[x] for x in ['name','zeta_v','evidence','applicable_to_surpass','limitations']},'ph':r.get('ph'),'iep_ph':r.get('iep_ph'),'runtime_mode':r.get('runtime_mode','reference_only'),'electrolyte':(f"{e.get('salt')} {e.get('concentration_mol_m3')} mol/m3" if e else 'unknown'),'measurement_method':r.get('measurement_method','unknown'),'curve_points':len(r['curve']['ph']) if r.get('curve') else 0,'template_source':(s.get('doi') or s['url'])+' '+str(s.get('locator',s.get('row',s.get('page'))))} | |
| if k=='template.list': | |
| return {'references':[dict(substance_id=k2,name=r['name'],material_class=r.get('material_class','textile'),runtime_mode=r['runtime_mode'],surface_identity=r.get('surface_identity',k2)) for k2,r in sorted(self.library['substances'].items()) if r.get('applicable_to_surpass') and r.get('runtime_mode') in RUNTIME_MODES]} | |
| if k=='plant.configure': | |
| if self.plant or self.powered or not a['accept_engineering_model']:raise ActionRejected('INITIALIZATION_ONLY') | |
| self.plant=copy.deepcopy(a);return {'configured':True} | |
| if k=='power.set': | |
| if not a['enabled'] and self.phase=='running':self._end('cancelled') | |
| self.powered=a['enabled'];return a | |
| if k=='acquisition.stop': | |
| if self.phase!='running':raise ActionRejected('NOT_RUNNING') | |
| self._end('cancelled');return {'phase':self.phase} | |
| if self.phase=='running':raise ActionRejected('BUSY') | |
| if k in ['cell.set','gap.set','lock.set','lid.set']: | |
| n=k.split('.')[0];v=next(iter(a.values())) | |
| if n=='cell' and (self.lock>.05 or self.V>0):raise ActionRejected('CELL_ACCESS') | |
| if n=='lock' and v>.05 and self.cell>.001:raise ActionRejected('CELL_ACCESS') | |
| if n=='gap' and abs(v/1e-6-round(v/1e-6))>1e-7:raise ActionRejected('GAP_RESOLUTION') | |
| setattr(self,n,v);return a | |
| if k=='sample.load': | |
| if not self.plant or self.sample or self.cell<.08 or self.lock>.05 or not a['accept_geometry_transfer']:raise ActionRejected('LOAD_PRECONDITION') | |
| r=self.library['substances'].get(a['reference_id']) | |
| if r is None:raise ActionRejected('UNKNOWN_REFERENCE') | |
| if not r.get('applicable_to_surpass'):raise ActionRejected('PARTICLE_REFERENCE_ONLY') | |
| mode=r.get('runtime_mode') | |
| if mode not in RUNTIME_MODES:raise ActionRejected('REFERENCE_ONLY') | |
| if mode in (LEGACY_MODE,)+SLOPE_MODES and not a['accept_ph_extrapolation']:raise ActionRejected('LOAD_PRECONDITION') | |
| if mode in SLOPE_MODES and not a['ph_slope_v']<0:raise ActionRejected('LOAD_PRECONDITION') | |
| self.sample=copy.deepcopy(a);return {'loaded':True} | |
| if k=='sample.unload': | |
| if not self.sample or self.cell<.08 or self.V>0:raise ActionRejected('CELL_ACCESS') | |
| self.sample=None;return {'unloaded':True} | |
| if k=='electrolyte.load': | |
| if not self.plant or self.liquid or self.lid<.08:raise ActionRejected('LOAD_PRECONDITION') | |
| self.liquid=copy.deepcopy(a);self.V=a['volume_m3'];n=self.V*a['kcl_mol_m3'];h=1000*10**(-a['initial_ph']);d=(h-self.plant['kw_mol2_m6']/h)*self.V;self.nk=n+max(0.,-d);self.ncl=n+max(0.,d);self.loaded_v=self.V;self.loaded_k=self.nk;self.loaded_cl=self.ncl;self.acid=a['acid_stock_m3'];self.base=a['base_stock_m3'];self.stock_c=a['titrant_mol_m3'];self.titrant_initial=self.acid+self.base;return {'loaded':True} | |
| if k=='electrolyte.drain': | |
| if self.lid<.08:raise ActionRejected('ACCESS_INTERLOCK') | |
| ans=dict(volume_m3=self.V,potassium_mol=self.nk,chloride_mol=self.ncl);self.returned_v+=self.V;self.returned_k+=self.nk;self.returned_cl+=self.ncl;self.V=0.;self.nk=0.;self.ncl=0.;return ans | |
| if k=='ph.calibrate': | |
| x,y=a['buffer_ph'];u,v=a['measured_v'] | |
| if abs(x-y)<1:raise ActionRejected('INVALID_CALIBRATION') | |
| slope=(v-u)/(y-x);offset=u-slope*x | |
| if not -.0615<=slope<=-.0568 or abs(offset)>.030001:raise ActionRejected('INVALID_CALIBRATION') | |
| self.cal_ph=(slope,offset);return dict(slope_v=slope,offset_v=offset) | |
| if k=='conductivity.calibrate':self.cal_cond=a['reference_s_m']/a['indicated_s_m'];return dict(factor=self.cal_cond) | |
| if k=='method.configure': | |
| if not self.plant or a['stop_pressure_pa']>=a['start_pressure_pa']:raise ActionRejected('INVALID_ARGUMENT') | |
| self.method=copy.deepcopy(a);return {'configured':True} | |
| if k=='acquisition.start': | |
| if not self.powered or not self.plant or not self.method or not self.sample or not self.V or not self.cal_ph or self.cal_cond is None or self.cell>.001 or self.lock<1. or self.lid>.001:raise ActionRejected('NOT_READY') | |
| ph,kap=self.indicated() | |
| if not 2-1e-8<=ph<=12+1e-8 or not .0001<=kap<=1.:raise ActionRejected('ELECTROLYTE_RANGE') | |
| r=self._ref();mode=r.get('runtime_mode',LEGACY_MODE) | |
| if mode!=LEGACY_MODE: | |
| e=r.get('electrolyte') or {};c=e.get('concentration_mol_m3') | |
| if not (e.get('salt')=='KCl' and c and abs(self.liquid['kcl_mol_m3']/c-1)<=.1) and not self.sample.get('accept_electrolyte_mismatch',False):raise ActionRejected('ELECTROLYTE_MISMATCH') | |
| if mode in CURVE_MODES and not self.sample['accept_ph_extrapolation']: | |
| lo,hi=r['curve']['ph'][0],r['curve']['ph'][-1] | |
| if any(t<lo-.05 or t>hi+.05 for t in self.method['ph_targets']):raise ActionRejected('PH_OUTSIDE_REFERENCE') | |
| self.trace=[];self.fits=[];self.fit_rows=[];self.target_idx=0;self.cycle=0;self.direction=1;self.elapsed=0.;self.stage='dose';self.stage_time=0.;self.phase='running';self.failure='';self.serial+=1;self.operation_id=f'{self.instance_id}:op:{self.serial}';return dict(operation_id=self.operation_id,phase=self.phase) | |
| raise ActionRejected('UNKNOWN_CAPABILITY') | |
| def _end(self,phase,reason=''): | |
| self.phase=phase;self.failure=reason;self.pressure=0.;self.cell_pressure=0.;self.flow=0.;self.voltage=0.;self.current=0.;self.chamber=[0.,0.];self.gas_n=0.;self.gas_initial_n=0. | |
| if self.operation_id:self.records[self.operation_id]=self._result() | |
| def _goto(self,stage):self.stage=stage;self.stage_time=0. | |
| def _dose(self): | |
| p=self.plant;t=self.method['ph_targets'][self.target_idx];# Control targets observed calibrated pH, not inaccessible true pH. | |
| true_target=(self.cal_ph[1]+self.cal_ph[0]*t-p['ph_offset_v'])/p['ph_slope_v'];h=1000*10**(-true_target);desired=h-p['kw_mol2_m6']/h;n=self.ncl-self.nk;diff=desired*self.V-n | |
| if abs(diff)<1e-15:self._goto('fill');return | |
| i=0 if diff>0 else 1;sign=1 if i==0 else -1;need=diff/(sign*self.stock_c-desired) | |
| if need<=0:self._end('failed','TITRANT_TOO_WEAK');return | |
| if self.syringe[i]<1e-15:self.refilling=i | |
| if self.refilling==i: | |
| stock=self.acid if i==0 else self.base;v=min(max(0.,1e-6-self.syringe[i]),stock,p['dose_flow_m3_s']*DT*10) | |
| if v<1e-15: | |
| if self.syringe[i]>1e-15:self.refilling=None;return | |
| self._end('failed','TITRANT_DEPLETED');return | |
| self.syringe[i]+=v | |
| if i==0:self.acid-=v | |
| else:self.base-=v | |
| if self.syringe[i]>=1e-6-1e-15:self.refilling=None | |
| return | |
| v=min(need,p['dose_flow_m3_s']*DT,self.syringe[i],.00025-self.V) | |
| if v<1e-16:self._end('failed','BEAKER_CAPACITY');return | |
| self.syringe[i]-=v;self.added[i]+=v;self.V+=v | |
| if i==0:self.ncl+=v*self.stock_c | |
| else:self.nk+=v*self.stock_c | |
| def _fit(self): | |
| if len(self.fit_rows)<2:return | |
| rows=self.fit_rows;x=[r['pressure_pa'] for r in rows];mx=sum(x)/len(x);den=sum((v-mx)**2 for v in x) | |
| if den<1e-12:self._end('failed','NO_PRESSURE_SPAN');return | |
| def reg(k): | |
| y=[r[k] for r in rows];my=sum(y)/len(y);s=sum((a-mx)*(b-my) for a,b in zip(x,y))/den;ss=sum((b-my)**2 for b in y);err=sum((b-(my+s*(a-mx)))**2 for a,b in zip(x,y));return s,1.-err/ss if ss>1e-30 else 1. | |
| su,ru=reg('streaming_v');si,ri=reg('streaming_a');p=self.plant;fac=p['viscosity_pa_s']/(EPS0*p['relative_permittivity']);kap=sum(r['conductivity_s_m'] for r in rows)/len(rows);self.fits.append(dict(ph=sum(r['ph'] for r in rows)/len(rows),slope_v_pa=su,slope_a_pa=si,zeta_from_v_v=su*fac*kap,zeta_from_i_v=si*fac*.020/(.010*self.gap),r2_v=ru,r2_i=ri,samples=len(rows)));self.fit_rows=[] | |
| def _tick(self): | |
| if self.phase!='running':return | |
| self.elapsed+=DT;self.stage_time+=DT;p=self.plant;m=self.method | |
| if self.stage=='dose':self._dose();return | |
| if self.stage=='fill': | |
| if self.V+1e-15<m['fill_volume_m3']:self._end('failed','INSUFFICIENT_ELECTROLYTE');return | |
| self.chamber=[m['fill_volume_m3'],0.];self.moved=0.;self.gas_v=p['gas_volume_m3'];self.pressure=m['start_pressure_pa'];self.gas_n=(self.pressure+p['ambient_pa'])*self.gas_v/(8.314462618*p['temperature_k']);self.gas_initial_n=self.gas_n;self.fit_rows=[];self._goto('ramp');return | |
| if self.stage!='ramp':return | |
| ph,kap=self.indicated();truth,ktrue,_=self.chemistry() | |
| if ph is None or not 2-1e-7<=ph<=12+1e-7 or not .0001<=kap<=1.:self._end('failed','ELECTROLYTE_RANGE');return | |
| resistance=12*p['viscosity_pa_s']*.02/(.01*self.gap**3)+p['extra_resistance_pa_s_m3'];q=self.pressure/resistance*(1-p['blocked_fraction']);oldvg=self.gas_v+self.moved;pv=self.gas_n*8.314462618*p['temperature_k'];vstop=max(0.,pv/(p['ambient_pa']+m['stop_pressure_pa'])-oldvg);dv=min(q*DT,self.chamber[0],vstop);self.chamber[0]-=dv;self.chamber[1]+=dv;self.moved+=dv;self.circulated+=dv;newvg=self.gas_v+self.moved;newp=pv/newvg-p['ambient_pa'];w=max(0.,pv*math.log(newvg/oldvg)-p['ambient_pa']*dv);self.work+=w;self.dissipation+=w;pressure=(self.pressure+newp)/2;rs=12*p['viscosity_pa_s']*.02/(.01*self.gap**3);pressure*=rs/resistance*(1-p['blocked_fraction']);self.cell_pressure=pressure;self.flow=self.direction*dv/DT | |
| zeta=reference_zeta(self._ref(),truth,self.sample['ph_slope_v']);area=.01*self.gap;conductance=ktrue*area/.02+p['surface_conductance_s'];current=EPS0*p['relative_permittivity']*zeta/p['viscosity_pa_s']*area/.02*pressure*self.direction;u=current/conductance;pvol=u*p['voltage_gain']+p['voltage_offset_v'];icur=current*p['current_gain']+p['current_offset_a'] | |
| if abs(pvol)>2 or abs(icur)>.002 or not 5<=1/conductance<=2e7:self._end('failed','ELECTRICAL_RANGE');return | |
| self.voltage=pvol;self.current=icur;self.pressure=max(0.,newp) | |
| row=dict(time_s=self.time_s,pressure_pa=pressure*self.direction,flow_m3_s=self.flow,streaming_v=self.voltage,streaming_a=self.current,ph=min(12.,max(2.,ph)),conductivity_s_m=kap,direction=self.direction);self.trace.append(row) | |
| if m['mode']=='zeta':self.fit_rows.append(row) | |
| if self.pressure<=m['stop_pressure_pa']+1e-6: | |
| if m['mode']=='zeta':self._fit() | |
| if self.phase!='running':return | |
| self.pressure=0.;self.cell_pressure=0.;self.flow=0.;self.voltage=0.;self.current=0.;self.chamber=[0.,0.];self.gas_n=0.;self.gas_initial_n=0. | |
| if self.direction==1:self.direction=-1;self._goto('fill') | |
| else: | |
| self.direction=1;self.cycle+=1 | |
| if self.cycle<m['cycles']:self._goto('fill') | |
| else: | |
| self.cycle=0;self.target_idx+=1 | |
| if self.target_idx<len(m['ph_targets']):self._goto('dose') | |
| else:self._end('succeeded') | |
| elif self.chamber[0]<1e-15:self._end('failed','CHAMBER_EMPTY') | |
| elif self.stage_time>=m['ramp_timeout_s']:self._end('failed','PRESSURE_TIMEOUT') | |
| def step(self,dt_s): | |
| if isinstance(dt_s,bool) or not isinstance(dt_s,(int,float)) or not math.isfinite(dt_s) or dt_s<0 or dt_s>7200:raise ActionRejected('INVALID_ARGUMENT') | |
| self.pending+=dt_s | |
| while self.pending+1e-12>=DT:self.pending=max(0.,self.pending-DT);self.time_s+=DT;self._tick();self.revision+=1 | |
| class AntonpaarSurpass3Session: | |
| def __init__(self,host,principal_id):self._host=host;self._principal=principal_id | |
| def _role(self):return self._host._principals[self._principal] | |
| def _target(self,i): | |
| if i!=self._host.instance_id:raise ActionRejected('UNKNOWN_INSTANCE') | |
| def describe(self,*,instance_id=None,asset_type_id=None): | |
| if (instance_id is None)==(asset_type_id is None):raise ActionRejected('INVALID_ARGUMENT') | |
| if instance_id is not None:self._target(instance_id) | |
| if asset_type_id is not None and asset_type_id!=ASSET_TYPE_ID:raise ActionRejected('UNKNOWN_INSTANCE') | |
| m=export_antonpaar_surpass3_contract_metadata();return dict(protocol_version=PROTOCOL_VERSION,asset_type_id=ASSET_TYPE_ID,asset_version='1.1.0',capabilities={k:v for k,v in m['capabilities'].items() if v['visibility']=='agent' or self._role!='agent'},state_slots={k:v for k,v in m['state_slots'].items() if v['visibility']=='agent' or self._role!='agent'}) | |
| def read(self,*,instance_id,state_ids=None): | |
| self._target(instance_id);h=self._host;v=h.read(self._role);ids=list(v) if state_ids is None else state_ids | |
| if not isinstance(ids,list) or any(not isinstance(k,str) for k in ids):raise ActionRejected('INVALID_ARGUMENT') | |
| if any(k not in v for k in ids):raise ActionRejected('ACCESS_DENIED') | |
| return dict(status='succeeded',instance_id=instance_id,state_revision=h.revision,clock={'domain':'simulation','time_s':h.time_s},observations={k:dict(value=v[k],unit=SLOTS[k][1],quality='unavailable' if v[k] is None else 'estimated' if SLOTS[k][2]=='derived' else 'valid',sample_time_s=h.time_s,sample_window_s=None) for k in ids}) | |
| def invoke(self,*,instance_id,capability_id,arguments,request_id): | |
| h=self._host | |
| try: | |
| self._target(instance_id) | |
| if not isinstance(capability_id,str) or capability_id not in CAPS:raise ActionRejected('UNKNOWN_CAPABILITY') | |
| if self._role=='agent' and CAPS[capability_id][5]!='agent':raise ActionRejected('ACCESS_DENIED') | |
| if not isinstance(request_id,str) or not request_id:raise ActionRejected('INVALID_ARGUMENT') | |
| validate(CAPS[capability_id][0],arguments);key=(self._principal,instance_id,request_id);digest=json.dumps([capability_id,arguments],sort_keys=True,allow_nan=False) | |
| if key in h._requests: | |
| old,result=h._requests[key] | |
| if old!=digest:raise ActionRejected('REQUEST_CONFLICT') | |
| return copy.deepcopy(result) | |
| result=h.invoke(capability_id,**arguments);op=result.get('operation_id') | |
| if op:h._owners[op]=self._principal | |
| response=dict(protocol_version=PROTOCOL_VERSION,instance_id=instance_id,request_id=request_id,operation_id=op,status='accepted' if op else 'succeeded',state_revision=h.revision,clock={'domain':'simulation','time_s':h.time_s},result=result,observations={},error=None);h._requests[key]=(digest,copy.deepcopy(response));return response | |
| except ActionRejected as exc:return dict(protocol_version=PROTOCOL_VERSION,instance_id=instance_id,request_id=request_id,operation_id=None,status='unsupported' if str(exc)=='UNSUPPORTED' else 'rejected',state_revision=h.revision,clock={'domain':'simulation','time_s':h.time_s},result={},observations={},error=dict(code=str(exc),message=str(exc),retryable=False,side_effects='none')) | |
| def write(self,*,instance_id,state_id,value,request_id): | |
| self._target(instance_id) | |
| if state_id not in SLOTS or not SLOTS[state_id][5]:raise ActionRejected('ACCESS_DENIED') | |
| cap,arg=SLOTS[state_id][5];return self.invoke(instance_id=instance_id,capability_id=cap,arguments={arg:value},request_id=request_id) | |
| def poll(self,operation_id): | |
| h=self._host | |
| if h._owners.get(operation_id)!=self._principal:raise ActionRejected('ACCESS_DENIED') | |
| record=h.records.get(operation_id) | |
| if operation_id==h.operation_id:record=h._result() | |
| if record is None:raise ActionRejected('UNKNOWN_OPERATION') | |
| return dict(operation_id=operation_id,status=record['phase'],result=copy.deepcopy(record)) | |
| def cancel(self,operation_id,request_id): | |
| self.poll(operation_id) | |
| if operation_id!=self._host.operation_id:raise ActionRejected('NOT_RUNNING') | |
| return self.invoke(instance_id=self._host.instance_id,capability_id='acquisition.stop',arguments={},request_id=request_id) | |
| def export_antonpaar_surpass3_contract_metadata(): | |
| caps={};slots={} | |
| for k,(s,u,o,v,c,w) in SLOTS.items():slots[k]=dict(meaning_zh=SLOT_ZH[k],component_ids=c,value_schema=copy.deepcopy(s),unit=u,reference_conditions='pressure: signed differential across modeled slit; gas pressure gauge vs explicit ambient_pa; liquid flow actual volume at host constant temperature; displacement in manifest joint frame',origin=o,visibility=v,access='read_write' if w else 'read_only',read_binding=dict(backend='host',artifact_id='runtime',accessor=f'AntonpaarSurpass3Session.read(state_ids=[{k!r}])'),write_via=dict(capability_id=w[0],argument=w[1],fixed_arguments={}) if w else None,sampling=dict(mode='instant',time_domain='simulation',window_description='fixed0.1s physical integration; current/voltage and pressure at flow-step midpoint'),source_ids=['simulation_assumption']) | |
| errors=['INVALID_ARGUMENT','UNKNOWN_INSTANCE','UNKNOWN_CAPABILITY','UNKNOWN_OPERATION','UNSUPPORTED','ACCESS_DENIED','REQUEST_CONFLICT','INITIALIZATION_ONLY','BUSY','UNKNOWN_REFERENCE','NOT_READY','NOT_RUNNING','CELL_ACCESS','ACCESS_INTERLOCK','LOAD_PRECONDITION','PARTICLE_REFERENCE_ONLY','GAP_RESOLUTION','ELECTROLYTE_RANGE','INVALID_CALIBRATION','REFERENCE_ONLY','ELECTROLYTE_MISMATCH','PH_OUTSIDE_REFERENCE'] | |
| for k,(inp,out,c,z,kind,vis,ex,effects) in CAPS.items(): | |
| un=k in UNSUPPORTED;asyn=k=='acquisition.start';caps[k]=dict(function_zh=z,kind=kind,visibility=vis,component_ids=c,availability='unsupported' if un else 'implemented',input_schema=copy.deepcopy(inp),output_schema=copy.deepcopy(out),implementation=dict(process='absent' if un else 'implemented',scene='absent',robot='absent',hardware='absent',host='absent' if un else 'implemented'),binding=None if un else dict(backend='host',artifact_id='runtime',entrypoint='asset_runtime.antonpaar_surpass3.AntonpaarSurpass3Session.invoke',invocation=f'session.invoke(instance_id="surpass3_01",capability_id={k!r},arguments={ex!r},request_id="unique")'),preconditions=[] if kind=='query' or un else [dict(description_zh='有限样品/电解液,标定有效、锁杆夹紧、无纳米参考冒用;拒绝原子回退',state_ids=['power.enabled','method.configured','sample.loaded','electrolyte.loaded','cell.withdrawal_m','lock.angle_rad','acquisition.phase'],enforced_by='runtime',check='Runtime.invoke atomic rollback; authenticated Session; failures in step preserve completed dosing and curves')],state_effects=[dict(state_id=x,timing='immediate',description_zh='受检动作更新状态') for x in effects],observes=[],model_effects=dict(mode='none',description_zh='待实际场景验证',binding_ids=[]),execution=dict(mode='asynchronous' if asyn else 'synchronous',time_domain='simulation',completion_criterion='全部目标pH与正反向扫描完成并拟合' if asyn else '事务返回;只有step推进过程',completion_state_ids=['acquisition.phase'] if asyn else [],timeout_s=None,cancellation='supported' if asyn else 'unsupported',retry='same_request_id',resources=['host_clock','sample','electrolyte','acid','base','gas_chamber','request_cache'],partial_failure_zh='已加入酸碱、改变pH及已完成扫描不回滚;泄压、内部液体返杯;固体样品不消耗'),errors=[dict(code=x,meaning_zh=x,side_effects='none') for x in errors],example_arguments=copy.deepcopy(ex),verification=[],limitations=['宏观表面参考来自厂家棉布点及公开文献(多为其他流动电位仪器),非本机原生测量;IEP/单点记录的pH斜率为宿主假设;纳米颗粒电泳记录禁止转用宏观样品'],source_ids=['manufacturer_manual','simulation_assumption']) | |
| if asyn:caps[k]['state_effects'] += [dict(state_id=x,timing='on_step',description_zh='推进有限滴定、压力扫描与斜率推断') for x in ['acid.stroke_m','base.stroke_m','ph.indicated','pressure.indicated_pa','streaming.indicated_v','streaming.indicated_a','result.zeta_v','result.iep_ph','acquisition.stage','acquisition.elapsed_s','acquisition.phase']] | |
| mech=dict(component_ids=['controller','hydraulic_module','sample_lower','sample_upper','acid_piston','base_piston','beaker_wall'],state_ids=list(slots),meaning_zh='有限强电解质滴定、等温气室驱动平板层流及Helmholtz–Smoluchowski拟合',implementation='lumped',equations=['electroneutrality: K+ + H+ = Cl- + OH-; H*OH=Kw; pH=-log10(H/1000), concentrations SI mol/m3','dose volume=(desired_net_H_conc*V-(nCl-nK))/(sign*Cstock-desired_net_H_conc); finite1mL syringes refill from finite bottles','Rslit=12*eta*L/(w*h^3); Q=Pgas/(Rslit+Rextra); measured pressure across slit=Q*Rslit; complete blockage closes flow','Pgas_abs*(Vg0+transferred_volume)=constant; stop at requested gauge stop pressure; cannot transfer beyond finite chamber liquid','Istr=epsilon*zeta/eta*(w*h/L)*Pslit; G=kappa*w*h/L+Gsurface; Ustr=Istr/G','OLS voltage and current slopes include independently configured gains/offsets; zetaU=dU/dP*eta*kappa/epsilon; zetaI=dI/dP*eta*L/(epsilon*w*h)','reference zeta(pH) by library runtime_mode: manufacturer cotton point or published single point → zeta_ref+host_slope*(pH-pH_ref); published IEP only → host_slope*(pH-IEP); measured_curve/anchor_curve → piecewise-linear interpolation of published (pH, zeta) points (anchor_curve adds published IEP as zeta=0), outside the published span constant end values except linear continuation of the end segment beyond an IEP end anchor; no ionic-strength correction (electrolyte mismatch must be accepted explicitly); onlybracketed observed zero crossing→IEP, no extrapolated IEP','sum volume and K/Cl ledger conserves loaded+dosed=remaining+returned; total liquid includes beaker and both internal chambers','isothermal pressure work=P0V0*ln(Vg_final/Vg_initial)-Pambient*liquid_transfer; all assigned hydraulic dissipation, bath removes work; no thermal solver','pH electrode E=hostE0+hostSlope*pH; two-buffer measured inputs determine calibration; conductivity reference/indicated ratio'],parameters={},source_ids=['manufacturer_specs','manufacturer_manual','hs_current','simulation_assumption'],limitations=['Macroscopic references = 1 manufacturer cotton point + published literature surfaces (see zeta_library.json counts); literature values come from other instruments/cells and are transferred to the modelled slit; 69 electrophoretic nanomaterial formulations reference-only.','Host pH slope for IEP-only/single-point records, plateau (or end-segment continuation beyond an IEP end anchor) outside published pH spans, no ionic-strength correction, cotton-cylinder→planar transfer, gas capacity, tubing resistance, ideal sensor models and bias coefficients explicit assumptions.','No empirical covariance/noise/drift/failure probability or calibrated recovery/response.','No surface adsorption/buffering, CO2, activities, competitive double-layer chemistry, streaming electroosmotic feedback or3D field/CFD.','Temperature constant from host; no thermal control or heat balance of neutralization/gas compression.','Other cell geometries, adsorption mode, external3500mbar option and OEM hardware unsupported.','Syringe volume→stroke uses assumed2e-5m2 bore; current motion surrogate not measured mechanical dimensions.','Robot manipulation/sealing and OS-level truth isolation not_run.']) | |
| spec=importlib.util.spec_from_file_location('_surpass_annotations',ROOT/'scripts/asset_runtime/_annotations.py');ann=importlib.util.module_from_spec(spec);spec.loader.exec_module(ann);ann.KEY_ZH.update(SLOT_ZH);ann.TRUTH_ZH.update(SLOT_ZH);ann.annotate_export(SLUG,caps,slots,{'surface_electrokinetics':mech},inputs={'plant.configure':(PLANT,PLANT_EXAMPLE),'method.configure':(METHOD,METHOD_EXAMPLE),'sample.load':(SAMPLE,SAMPLE_EXAMPLE),'electrolyte.load':(LIQUID,LIQUID_EXAMPLE)}) | |
| for k,v in slots.items():v['meaning_zh']=SLOT_ZH[k]+';来源='+v['origin']+'。' | |
| return dict(asset_type_id=ASSET_TYPE_ID,catalog_id=CATALOG_ID,capabilities=caps,state_slots=slots,mechanisms={'surface_electrokinetics':mech}) | |