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17.7 kB
| import re | |
| import os | |
| import sys | |
| import math | |
| import tokenize | |
| import tiktoken | |
| import tempfile | |
| import jsonlines | |
| import subprocess | |
| import scipy.stats | |
| from io import StringIO | |
| from statistics import mean | |
| from tree_sitter import Language, Parser | |
| from nltk.tokenize import wordpunct_tokenize | |
| from nltk.translate.bleu_score import sentence_bleu, SmoothingFunction | |
| def pass_at_k_continuous_vals(n, k, vals): | |
| #Score@k,n is the continuous value version of pass@k,n defined in MGCoder paper. | |
| assert len(vals) == n | |
| assert n >= k, (n, k) | |
| assert all(vals[i-1] >= vals[i] for i in range(1, len(vals))), (n, k, vals) | |
| isum = 0 | |
| for i in range(1, n-k+2): | |
| # i ranges from 1 to n-k+1 | |
| isum += (vals[i-1]*math.comb(n-i,k-1)) | |
| return isum/math.comb(n,k) | |
| def remove_comments(code: str, language: str) -> str: | |
| #Using re module to remove comments for specific languages | |
| if language.lower() == "python": | |
| try: | |
| return remove_py_comments(code) | |
| except: | |
| pattern = r'\'{3}[\s\S]*?\'{3}|\"{3}[\s\S]*?\"{3}|\#[^\n]*' | |
| elif language in ["java", "javascript", "scala", "kotlin", "c++", "c", "ino", "objectivec"]: | |
| pattern = r"\/\*[\s\S]*?\*\/|\/\/[^\n]*" | |
| elif language == 'assembly': | |
| pattern = r';.*|\#.*|\/*[\s\S]*?\*\/' | |
| elif language == 'javascript xml': | |
| pattern = r"\/\*[\s\S]*?\*\/|\/\/[^\n]*|<!--.*?-->" | |
| code=re.sub(pattern, '', code) | |
| return code | |
| def remove_blank_lines(code) -> str: | |
| #Remove blank lines in a string | |
| try: | |
| lines = code.split("\n") | |
| non_blank_lines = [line for line in lines if line.strip() != ""] | |
| return "\n".join(non_blank_lines) | |
| except: | |
| return code | |
| def diff_bleu(source_code, target, generated_answers, pl): | |
| """Calculating the DiffBleu score. | |
| It is the bleu score between the git diff of the source and generated code and git diff of the source and target.""" | |
| with tempfile.NamedTemporaryFile(mode = 'w', delete = False) as source_temp, tempfile.NamedTemporaryFile(mode = 'w', delete = False) as target_temp, tempfile.NamedTemporaryFile(mode = 'w', delete = False) as generated_temp: | |
| source_temp.write(remove_blank_lines(remove_comments(source_code,pl.lower()))) | |
| target_temp.write(remove_blank_lines(remove_comments(target,pl.lower()))) | |
| generated_temp.write(remove_blank_lines(remove_comments(generated_answers,pl.lower()))) | |
| source_path = source_temp.name | |
| target_path = target_temp.name | |
| generated_answers_path = generated_temp.name | |
| command_diff_generated = "git diff -U0 --no-index --ignore-all-space --ignore-blank-lines {} {} | tail -n +5 | grep -v 'No newline at end of file'".format(source_path,generated_answers_path) | |
| command_diff_target = "git diff -U0 --no-index --ignore-all-space --ignore-blank-lines {} {} | tail -n +5 | grep -v 'No newline at end of file'".format(source_path,target_path) | |
| diff_generated = subprocess.run(command_diff_generated, shell=True, stdout=subprocess.PIPE, stderr=subprocess.PIPE).stdout.decode() | |
| diff_target = subprocess.run(command_diff_target, shell=True, stdout=subprocess.PIPE, stderr=subprocess.PIPE).stdout.decode() | |
| diff_generated = wordpunct_tokenize(diff_generated) | |
| diff_target = wordpunct_tokenize(diff_target) | |
| diff_score_bleu = sentence_bleu([diff_target], diff_generated, smoothing_function=SmoothingFunction().method1) | |
| if remove_blank_lines(remove_comments(generated_answers, pl.lower())).strip() == "": | |
| return 0 | |
| return diff_score_bleu | |
| def get_welch_t_test_p(m1: float, s1: float, m2: float, s2: float, n1: int, n2: int) -> float: | |
| """Returns the p-value of a Welch's t-test. The null hypothesis is that the two samples have the same mean. | |
| Alternative hypothesis is that the first sample has a smaller mean than the second sample. | |
| The first distribution is (m1, s1) and the second distribution is (m2, s2). The number of samples in each distribution is n1 and n2 respectively. | |
| Returns: | |
| float: p-value | |
| """ | |
| return scipy.stats.ttest_ind_from_stats( | |
| mean1 = m1, | |
| mean2 = m2, | |
| std1 = s1, | |
| std2 = s2, | |
| nobs1 = n1, | |
| nobs2 = n2, | |
| equal_var = False, # Welch's t-test - unequal variances | |
| alternative = "less", # one-sided - generated is faster | |
| ).pvalue | |
| def num_tokens_from_string(string: str, model: str) -> int: | |
| """Returns the number of tokens in a text string.""" | |
| encoding = tiktoken.encoding_for_model(model) | |
| num_tokens = len(encoding.encode(string)) | |
| return num_tokens | |
| def statistical_significance_test(output_path,n,k_values): | |
| avg_speedup = {} | |
| fun_correct = {} | |
| imp = {} | |
| for k in k_values: | |
| avg_speedup[k] = [] | |
| fun_correct[k] = [] | |
| imp[k] = [] | |
| with jsonlines.open(output_path) as f: | |
| for item in f: | |
| prob_id = item['problem_id'] | |
| scores = [] | |
| correct = [] | |
| sig = [] | |
| for i in range(n): | |
| if item[f"generated_answers_{i}_acc"] != 1: | |
| scores.append(1) | |
| correct.append(0) | |
| sig.append(0) | |
| else: | |
| m1 = item[f'generated_answers_{i}_time_mean'] | |
| s1 = item[f'generated_answers_{i}_time_std'] | |
| nobs1 = 25 | |
| m2 = item['input_time_mean'] | |
| s2 = item['input_time_std'] | |
| nobs2 = 25 | |
| welch = get_welch_t_test_p(m1,s1,m2,s2,nobs1,nobs2) | |
| if(welch<.05 and item['input_time_mean'] > item[f'generated_answers_{i}_time_mean']): | |
| scores.append(item['input_time_mean']/item[f'generated_answers_{i}_time_mean']) | |
| sig.append(1) | |
| else: | |
| scores.append(1) | |
| sig.append(0) | |
| correct.append(1) | |
| scores = sorted(scores,reverse = True) | |
| correct = sorted(correct,reverse = True) | |
| sig = sorted(sig,reverse = True) | |
| for k in k_values: | |
| avg_speedup[k].append(pass_at_k_continuous_vals(n, k, scores)) | |
| fun_correct[k].append(pass_at_k_continuous_vals(n, k, correct)) | |
| imp[k].append(pass_at_k_continuous_vals(n, k, sig)) | |
| scores = [] | |
| for k in k_values: | |
| scores.append(round(mean(avg_speedup[k]), 3)) | |
| scores.append(round(mean(fun_correct[k]), 3)) | |
| scores.append(round(mean(imp[k]), 3)) | |
| return scores | |
| def get_files_with_syntax_errors(generated_code_path, codeql_db_path, query): | |
| #Find the files with syntax errors on running codeql by finding warning pattern in the db logs created. | |
| error_files = [] | |
| error_pattern = r"\[WARN\] \[\d*\] Failed to analyse imports of ([a-zA-Z0-9\\/.:_\-\(\)\']*) : Syntax Error \(line \d*\)" | |
| error_pattern_expr = re.compile(error_pattern) | |
| parent_path = os.path.abspath(generated_code_path + "/") | |
| log_dir = codeql_db_path + "/{}/log/".format(query) | |
| if not os.path.exists(log_dir): | |
| raise FileNotFoundError(log_dir) | |
| for p in os.listdir(log_dir): | |
| if p.startswith('database-create'): | |
| log_path = p | |
| with open(log_dir + log_path, 'r') as f: | |
| logs = f.read() | |
| files_with_syntax_error = error_pattern_expr.findall(logs) | |
| for file_with_error in files_with_syntax_error: | |
| if not os.path.exists(file_with_error): | |
| print("danger: ", file_with_error) | |
| sys.exit(-1) | |
| child_path = os.path.abspath(file_with_error) | |
| if os.path.commonpath([parent_path]) == os.path.commonpath([parent_path, child_path]): | |
| error_files.append(file_with_error.split("/")[-1]) | |
| return error_files | |
| def remove_py_comments(source): | |
| #Robustly remove python specific comments | |
| io_obj = StringIO(source) | |
| out = "" | |
| prev_toktype = tokenize.INDENT | |
| last_lineno = -1 | |
| last_col = 0 | |
| for tok in tokenize.generate_tokens(io_obj.readline): | |
| token_type = tok[0] | |
| token_string = tok[1] | |
| start_line, start_col = tok[2] | |
| end_line, end_col = tok[3] | |
| ltext = tok[4] | |
| if start_line > last_lineno: | |
| last_col = 0 | |
| if start_col > last_col: | |
| out += (" " * (start_col - last_col)) | |
| if token_type == tokenize.COMMENT: | |
| pass | |
| elif token_type == tokenize.STRING: | |
| if prev_toktype != tokenize.INDENT: | |
| if prev_toktype != tokenize.NEWLINE: | |
| if start_col > 0: | |
| out += token_string | |
| else: | |
| out += token_string | |
| prev_toktype = token_type | |
| last_col = end_col | |
| last_lineno = end_line | |
| return out | |
| def check_syntax(code,language): | |
| #Checks if the code passed parses without any errors using tree-sitter | |
| code += '\n' | |
| if(language.lower() == "java"): | |
| path = 'src/evaluation/tree-sitter/tree-sitter-java' | |
| elif(language.lower() == "python"): | |
| path = 'src/evaluation/tree-sitter/tree-sitter-python' | |
| elif(language.lower() == "scala"): | |
| path = 'src/evaluation/tree-sitter/tree-sitter-scala' | |
| elif(language.lower() == "c"): | |
| path = 'src/evaluation/tree-sitter/tree-sitter-c' | |
| elif(language.lower() == "c++"): | |
| path = 'src/evaluation/tree-sitter/tree-sitter-cpp' | |
| elif(language.lower() == "objectivec"): | |
| path = 'src/evaluation/tree-sitter/tree-sitter-objc' | |
| elif(language.lower() == "javascript"): | |
| path = 'src/evaluation/tree-sitter/tree-sitter-javascript' | |
| elif(language.lower() == "kotlin"): | |
| path = 'src/evaluation/tree-sitter/tree-sitter-kotlin' | |
| else: | |
| return(False) | |
| Language.build_library( | |
| 'src/evaluation/tree-sitter/build/my-languages_{}.so'.format(language.lower()), | |
| [ | |
| path | |
| ] | |
| ) | |
| if(language.lower() == "java"): | |
| LANGUAGE = Language('src/evaluation/tree-sitter/build/my-languages_java.so', 'java') | |
| elif(language.lower() == "python"): | |
| LANGUAGE = Language('src/evaluation/tree-sitter/build/my-languages_python.so', 'python') | |
| elif(language.lower() == "scala"): | |
| LANGUAGE = Language('src/evaluation/tree-sitter/build/my-languages_scala.so', 'scala') | |
| elif(language.lower() == "c"): | |
| LANGUAGE = Language('src/evaluation/tree-sitter/build/my-languages_c.so', 'c') | |
| elif(language.lower() == "c++"): | |
| LANGUAGE = Language('src/evaluation/tree-sitter/build/my-languages_c++.so', 'cpp') | |
| elif(language.lower() == "objectivec"): | |
| LANGUAGE = Language('src/evaluation/tree-sitter/build/my-languages_objectivec.so', 'objc') | |
| elif(language.lower() == "javascript"): | |
| LANGUAGE = Language('src/evaluation/tree-sitter/build/my-languages_javascript.so', 'javascript') | |
| elif(language.lower() == "kotlin"): | |
| LANGUAGE = Language('src/evaluation/tree-sitter/build/my-languages_kotlin.so', 'kotlin') | |
| parser = Parser() | |
| parser.set_language(LANGUAGE) | |
| tree = parser.parse(bytes(code, "utf8")) | |
| def find_error(node): | |
| if node.type == 'ERROR': | |
| print(f'Error found from line {node.start_point[0]+1}, column {node.start_point[1]+1} to line {node.end_point[0]+1}, column {node.end_point[1]+1}') | |
| for child in node.children: | |
| find_error(child) | |
| return not(tree.root_node.has_error) | |
| def extract_parsable_code(start, code, code_list,top,bottom, pl): | |
| #Checking thw largest parsable combination in a sentence of text | |
| while top < bottom: | |
| code1 = " ".join(code_list[top:bottom]) | |
| code2 = " ".join(code_list[top:bottom-1]) | |
| code3 = " ".join(code_list[top+1:bottom]) | |
| if(start): | |
| if check_syntax(code1 + "\n" + code,pl): | |
| return code1 | |
| elif check_syntax(code2 + "\n" + code,pl): | |
| return code2 | |
| elif check_syntax(code3 + "\n" + code,pl): | |
| return code3 | |
| else: | |
| top += 1 | |
| bottom -= 1 | |
| else: | |
| if check_syntax(code+"\n" + code1,pl): | |
| return code1 | |
| elif check_syntax(code+"\n" + code2,pl): | |
| return code2 | |
| elif check_syntax(code+"\n" + code3,pl): | |
| return code3 | |
| else: | |
| top += 1 | |
| bottom -= 1 | |
| return None | |
| def post_process_generations(generated_answers: str, model: str, prompt:str, pl: str) -> str: | |
| """Post processing outputs to first extract the code between backquotes after response as defined in the template. | |
| Failing which we try to use tree-sitter to obtain maximum parsable block of code but it is the models failure to not follow the tempate | |
| """ | |
| failed = 0 | |
| generated_answers = remove_blank_lines(generated_answers) | |
| if(prompt == "one-shot" or prompt == "chain_of_thought"): | |
| index = 2 | |
| else: | |
| index = 1 | |
| #Extracting the code after the Response keyword within triple backquotes | |
| try: | |
| generated_answers=generated_answers.split('Response:')[index].strip().split("Instruction:")[0] | |
| generated_answers_post=generated_answers.split("```")[1:] | |
| generated_answers_post = "\n".join("```".join(generated_answers_post).split('\n')[1:]) | |
| generated_pass = 0 | |
| if(generated_answers_post.find("```") != -1): | |
| generated_answers_post=generated_answers_post.split('```')[0] | |
| passed = 1 | |
| if(generated_answers_post == ""): | |
| passed = 0 | |
| return [passed,generated_answers_post] | |
| else: | |
| failed = 1 | |
| except: | |
| if(prompt=="chain_of_thought"): | |
| try: | |
| generated_answers="```".join(generated_answers.split("Thought")[2].split("```")[1:]) | |
| if(generated_answers.find("```")!=-1): | |
| generated_answers = "\n".join(generated_answers.split("```")[0].split("\n")[1:]) | |
| return [1,generated_answers] | |
| else: | |
| failed = 1 | |
| except: | |
| failed = 1 | |
| else: | |
| failed = 1 | |
| unsupported_pl = ['javascript xml', 'ino', 'assembly'] | |
| if(pl.lower() in unsupported_pl): | |
| generated_answers = remove_blank_lines(generated_answers.strip()) | |
| return [0,generated_answers] | |
| # If the template is not followed, we try to use tree-sitter to extract parsable code | |
| if (failed): | |
| generated_answers = generated_answers.replace('\"','"').replace("\'","'").replace("\/\/","//").replace("\/*","/*").replace("*\/","*/") | |
| example_list = generated_answers.splitlines() | |
| for i in range(len(example_list)): | |
| if(check_syntax(example_list[i],pl)): | |
| start_index = i | |
| break | |
| try: | |
| start_index | |
| except: | |
| start_index = 0 | |
| if len(example_list) == 0: | |
| return [0,generated_answers] | |
| example_list[start_index] = example_list[start_index].strip() | |
| last_index = len(example_list) | |
| #Finding largest possible codeblock that parses | |
| while(last_index > start_index): | |
| code="" | |
| for j in range(start_index, last_index): | |
| code += example_list[j]+"\n" | |
| if(check_syntax(code,pl)): | |
| last_index = last_index-1 | |
| break | |
| else: | |
| last_index -= 1 | |
| line_parse_start = "" | |
| line_parse_end = "" | |
| #Checking if the line before the current block can also be parsed after tokeninizing by spaces. | |
| if(start_index != 0): | |
| ind = start_index-1 | |
| line = example_list[ind] | |
| try: | |
| tokenized_sentence = line.strip("```").split(" ") | |
| except: | |
| tokenized_sentence = line.strip("```") | |
| line_parse_start = extract_parsable_code(start = True, code = code, code_list = tokenized_sentence, top = 0, bottom = len(tokenized_sentence), pl = pl) | |
| flag = 1 | |
| if line_parse_start == None: | |
| line_parse_start = "" | |
| end_split = line_parse_start.strip().split(" ") | |
| if(len(end_split) == 1): | |
| if(end_split[0].isalnum()): | |
| flag = 0 | |
| if(check_syntax(line_parse_start+"\n"+code,pl) and flag): | |
| code = line_parse_start + "\n"+ code | |
| #Checking if the line after the current block can also be parsed after tokeninizing by spaces. | |
| if(last_index != (len(example_list)-1)): | |
| ind = last_index+1 | |
| line = example_list[ind] | |
| try: | |
| tokenized_sentence = line.strip("```").split(" ") | |
| except: | |
| tokenized_sentence = line.strip("```") | |
| line_parse_end=extract_parsable_code(start = False, code = code, code_list = tokenized_sentence, top = 0, bottom = len(tokenized_sentence), pl = pl) | |
| if line_parse_end == None: | |
| line_parse_end = "" | |
| end_split = line_parse_end.strip().split(" ") | |
| if(len(end_split) == 1): | |
| if(end_split[0].isalnum()): | |
| code = remove_blank_lines(code.strip()) | |
| return [0,code] | |
| if(check_syntax(code + "\n" + line_parse_end, pl)): | |
| code+="\n" + line_parse_end | |
| code = remove_blank_lines(code.strip()) | |
| return [0,code] |