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def add_deploy(state, deploy_func, *args, **kwargs): frameinfo = get_caller_frameinfo() kwargs['frameinfo'] = frameinfo for host in state.inventory: deploy_func(state, host, *args, **kwargs)
Prepare & add an deploy to pyinfra.state by executing it on all hosts. Args: state (``pyinfra.api.State`` obj): the deploy state to add the operation deploy_func (function): the operation function from one of the modules, ie ``server.user`` args/kwargs: passed to the operation function
codesearchnet
def to_geotiff(arr, path='./output.tif', proj=None, spec=None, bands=None, **kwargs): assert has_rasterio, "To create geotiff images please install rasterio" try: img_md = arr.rda.metadata["image"] x_size = img_md["tileXSize"] y_size = img_md["tileYSize"] except (Attr...
Write out a geotiff file of the image Args: path (str): path to write the geotiff file to, default is ./output.tif proj (str): EPSG string of projection to reproject to spec (str): if set to 'rgb', write out color-balanced 8-bit RGB tif bands (list): list of bands to export. If spec='rgb' will default to RGB bands Re...
juraj-google-style
def AddTask(self, target, args=(), name='Unnamed task', blocking=True, inline=True): if (not self.started): raise ThreadPoolNotStartedError(self.name) if (self.max_threads == 0): target(*args) return if inline: blocking = False with self.lock: while True: ...
Adds a task to be processed later. Args: target: A callable which should be processed by one of the workers. args: A tuple of arguments to target. name: The name of this task. Used to identify tasks in the log. blocking: If True we block until the task is finished, otherwise we raise queue.Full inline: If set, process...
codesearchnet
def elmo_loss2ppl(losses: List[np.ndarray]) -> float: avg_loss = np.mean(losses) return float(np.exp(avg_loss))
Calculates perplexity by loss Args: losses: list of numpy arrays of model losses Returns: perplexity : float
codesearchnet
def partial_declaration_path(decl): if not decl: return [] if not decl.cache.partial_declaration_path: result = [decl.partial_name] parent = decl.parent while parent: if parent.cache.partial_declaration_path: result.reverse() ...
Returns a list of parent declarations names without template arguments that have default value. Args: decl (declaration_t): declaration for which the partial declaration path should be calculated. Returns: list[(str | basestring)]: list of names, where first item is the top parent name and last item the inputted decl...
juraj-google-style
def __init__(self, bundle_context_manager: execution.BundleContextManager, progress_frequency: Optional[float]=None, cache_token_generator=FnApiRunner.get_cache_token_generator(), split_managers=()) -> None: self.bundle_context_manager: execution.BundleContextManager = bundle_context_manager self._progress_freq...
Set up a bundle manager. Args: progress_frequency
github-repos
def _HasId(self, schedule, entity_id): try: self._GetById(schedule, entity_id) has = True except KeyError: has = False return has
Check if the schedule has an entity with the given id. Args: schedule: The transitfeed.Schedule instance to look in. entity_id: The id of the entity. Returns: True if the schedule has an entity with the id or False if not.
juraj-google-style
def analyze_directory(self, directory: Path, identifier: Union[str, None]=None, ignore_files: Union[list[str], None]=None, n_identifier: Union[str, list[str], None]=None, only_modules: bool=True): files = [file for file in os.listdir(directory) if os.path.isfile(os.path.join(directory, file))] if identifier is ...
Runs through the specific directory, looking for the files identified with `identifier`. Executes the doctests in those files Args: directory (`Path`): Directory containing the files identifier (`str`): Will parse files containing this ignore_files (`List[str]`): List of files to skip n_identifier (`str` or `List[str]...
github-repos
def verify_profile_name(msg, cfg): if msg.profile not in cfg.data: raise UnknownProfileError(msg.profile)
Verifies the profile name exists in the config.json file. Args: :msg: (Message class) an instance of a message class. :cfg: (jsonconfig.Config) config instance.
juraj-google-style
def launch(self, image, command, **kwargs): if isinstance(command, PythonCall): return PythonJob(self, image, command, **kwargs) else: return Job(self, image, command, **kwargs)
Create a job on this engine Args: image (str): name of the docker image to launch command (str): shell command to run
codesearchnet
def diagonal_gaussian_posterior_builder(getter, name, shape=None, *args, **kwargs): parameter_shapes = tfp.distributions.Normal.param_static_shapes(shape) loc_var = getter((name + '/posterior_loc'), *args, shape=parameter_shapes['loc'], **kwargs) scale_var = getter((name + '/posterior_scale'), *args, shape=...
A pre-canned builder for diagonal gaussian posterior distributions. Given a true `getter` function and arguments forwarded from `tf.get_variable`, return a distribution object for a diagonal posterior over a variable of the requisite shape. Args: getter: The `getter` passed to a `custom_getter`. Please see the docume...
codesearchnet
def replace_keywords(self, sentence): if (not sentence): return sentence new_sentence = [] orig_sentence = sentence if (not self.case_sensitive): sentence = sentence.lower() current_word = '' current_dict = self.keyword_trie_dict current_white_space = '' sequence_end_pos ...
Searches in the string for all keywords present in corpus. Keywords present are replaced by the clean name and a new string is returned. Args: sentence (str): Line of text where we will replace keywords Returns: new_sentence (str): Line of text with replaced keywords Examples: >>> from flashtext import KeywordProces...
codesearchnet
def flowread(flow_or_path, quantize=False, concat_axis=0, *args, **kwargs): if isinstance(flow_or_path, np.ndarray): if ((flow_or_path.ndim != 3) or (flow_or_path.shape[(- 1)] != 2)): raise ValueError('Invalid flow with shape {}'.format(flow_or_path.shape)) return flow_or_path elif (...
Read an optical flow map. Args: flow_or_path (ndarray or str): A flow map or filepath. quantize (bool): whether to read quantized pair, if set to True, remaining args will be passed to :func:`dequantize_flow`. concat_axis (int): The axis that dx and dy are concatenated, can be either 0 or 1. Ignored if quantize is Fal...
codesearchnet
def qhull_cmd(cmd, options, points): prep_str = [str(len(points[0])), str(len(points))] prep_str.extend([' '.join(map(repr, row)) for row in points]) output = getattr(hull, cmd)(options, '\n'.join(prep_str)) return list(map(str.strip, output.strip().split('\n')))
Generalized helper method to perform a qhull based command. Args: cmd: Command to perform. Supported commands are qconvex, qdelaunay and qvoronoi. options: Options to be provided for qhull command. See specific methods for info on supported options. Up to two options separated by spaces are supported. points: Sequence...
codesearchnet
def from_file_msg(cls, fp): log.debug("Parsing email from file Outlook") f, _ = msgconvert(fp) return cls.from_file(f, True)
Init a new object from a Outlook message file, mime type: application/vnd.ms-outlook Args: fp (string): file path of raw Outlook email Returns: Instance of MailParser
juraj-google-style
def from_dense(tensor, name=None): with ops.name_scope(name, 'dense_to_sparse'): tensor = ops.convert_to_tensor(tensor) indices = array_ops.where_v2(math_ops.not_equal(tensor, array_ops.zeros_like(tensor))) values = array_ops.gather_nd(tensor, indices) shape = array_ops.shape(tensor,...
Converts a dense tensor into a sparse tensor. Only elements not equal to zero will be present in the result. The resulting `SparseTensor` has the same dtype and shape as the input. >>> sp = tf.sparse.from_dense([0, 0, 3, 0, 1]) >>> sp.shape.as_list() [5] >>> sp.values.numpy() array([3, 1], dtype=int32) >>> sp.indices...
github-repos
def download_apcor(self, uri): local_file = os.path.basename(uri) if os.access(local_file, os.F_OK): fobj = open(local_file) else: fobj = storage.vofile(uri, view='data') fobj.seek(0) str = fobj.read() fobj.close() apcor_str =...
Downloads apcor data. Args: uri: The URI of the apcor data file. Returns: apcor: ossos.downloads.core.ApcorData
juraj-google-style
def load(self, txt_fst_filename): with open(txt_fst_filename, 'r') as txt_fst: for line in txt_fst: line = line.strip() splitted_line = line.split() if len(splitted_line) == 1: self[int(splitted_line[0])].final = True ...
Save the transducer in the text file format of OpenFST. The format is specified as follows: arc format: src dest ilabel olabel [weight] final state format: state [weight] lines may occur in any order except initial state must be first line Args: txt_fst_filename (string): The name of the file Returns: None
juraj-google-style
def intersects(self, other): try: return (self.min_x <= other.max_x and self.max_x >= other.min_x and self.min_y <= other.max_y and self.max_y >= other.min_y) except AttributeError: return self.intersects(Envelo...
Returns true if this envelope intersects another. Arguments: other -- Envelope or tuple of (minX, minY, maxX, maxY)
juraj-google-style
def __delitem__(self, anchor_id): try: self._anchor_path(anchor_id).unlink() except OSError: raise KeyError('No anchor with id {}'.format(anchor_id))
Remove an anchor from storage. Args: anchor_id: The ID of the anchor to remove. Raises: KeyError: There is no anchor with that ID.
juraj-google-style
def get_vm(access_token, subscription_id, resource_group, vm_name): endpoint = ''.join([get_rm_endpoint(), '/subscriptions/', subscription_id, '/resourceGroups/', resource_group, '/providers/Microsoft.Compute/virtualMachines/', vm_name, '?api-version=', COMP_API]) return do_get(endpoint, access_token)
Get virtual machine details. Args: access_token (str): A valid Azure authentication token. subscription_id (str): Azure subscription id. resource_group (str): Azure resource group name. vm_name (str): Name of the virtual machine. Returns: HTTP response. JSON body of VM properties.
codesearchnet
async def update_notifications(self, on_match_open: bool=None, on_tournament_end: bool=None): params = {} if (on_match_open is not None): params['notify_users_when_matches_open'] = on_match_open if (on_tournament_end is not None): params['notify_users_when_the_tournament_ends'] = on_tourname...
update participants notifications for this tournament |methcoro| Args: on_match_open: Email registered Challonge participants when matches open up for them on_tournament_end: Email registered Challonge participants the results when this tournament ends Raises: APIException
codesearchnet
def _compile_output_step(outputs): if (not outputs): raise GraphQLCompilationError(u'No fields were selected for output! Please mark at least one field with the @output directive.') output_fields = {} for (output_name, output_context) in six.iteritems(outputs): location = output_context['loc...
Construct the final ConstructResult basic block that defines the output format of the query. Args: outputs: dict, output name (string) -> output data dict, specifying the location from where to get the data, and whether the data is optional (and therefore may be missing); missing optional data is replaced with 'null' ...
codesearchnet
def add_task(self, tile_address, coroutine): self._loop.call_soon_threadsafe(self._add_task, tile_address, coroutine)
Add a task into the event loop. This is the main entry point for registering background tasks that are associated with a tile. The tasks are added to the EmulationLoop and the tile they are a part of is recorded. When the tile is reset, all of its background tasks are canceled as part of the reset process. If you ha...
codesearchnet
def check_function_argument_count(func, input_arity, infeed_queue): def format_error(complaint, quantity): return '%s %d argument%s' % (complaint, quantity, '' if quantity == 1 else 's') num_args_supplied = input_arity if infeed_queue is not None: num_args_supplied += infeed_queue.number_of...
Validate the number of input arguments to an XLA function. Args: func: the Python function that will be called to generate the body of an XLA computation graph. input_arity: the number of explicit arguments supplied by the caller. infeed_queue: if not None, the infeed queue that will supply additional arguments to the...
github-repos
def split_line(what, indent='', cols=79): if len(indent) > cols: raise ValueError("The indent can't be longer than cols.") if cols < 2: raise ValueError( "The cols can't be smaller than 2 (a char plus a possible '-')" ) what = indent + what.lstrip() if len(wha...
Split a line on the closest space, or break the last word with '-'. Args: what(str): text to spli one line of. indent(str): will prepend this indent to the split line, taking it into account in the column count. cols(int): maximum length of the split line. Returns: tuple(str, str): rest of the text and split line in ...
juraj-google-style
def purity(state): rho = np.array(state) if rho.ndim == 1: return 1.0 return np.real(np.trace(rho.dot(rho)))
Calculate the purity of a quantum state. Args: state (ndarray): a quantum state Returns: float: purity.
juraj-google-style
def _UpdateUsers(self, update_users): for (user, ssh_keys) in update_users.items(): if ((not user) or (user in self.invalid_users)): continue configured_keys = self.user_ssh_keys.get(user, []) if (set(ssh_keys) != set(configured_keys)): if (not self.utils.UpdateUser(u...
Provision and update Linux user accounts based on account metadata. Args: update_users: dict, authorized users mapped to their public SSH keys.
codesearchnet
def fit_to_structure(self, structure, symprec=0.1): sga = SpacegroupAnalyzer(structure, symprec) symm_ops = sga.get_symmetry_operations(cartesian=True) return sum([self.transform(symm_op) for symm_op in symm_ops]) / len(symm_ops)
Returns a tensor that is invariant with respect to symmetry operations corresponding to a structure Args: structure (Structure): structure from which to generate symmetry operations symprec (float): symmetry tolerance for the Spacegroup Analyzer used to generate the symmetry operations
juraj-google-style
def __init__(self, group, provider, checker, code, messages): self.group = group self.provider = provider self.checker = checker self.code = code self.messages = messages
Initialization method. Args: group (AnalysisGroup): parent group. provider (Provider): parent Provider. checker (Checker): parent Checker. code (int): constant from Checker class. messages (str): messages string.
juraj-google-style
def get_file_list(wildcard): files = glob.glob(os.path.expanduser(wildcard)) return files
Search for files to be concatenated. Currently very basic, but could expand to be more sophisticated. Args: wildcard (regular expression string) Returns: files (list of full file paths)
codesearchnet
def read(keypath, configfile=None): if configfile in _configs: appconfig = _configs[configfile] else: appconfig = AppConfig(configfile=configfile) _configs[configfile] = appconfig return appconfig.read(keypath)
Reads a value from the configuration file. Args: keypath: str Specifies the key for which the value is desired. It can be a hierarchical path. Example: "section1.subsection.key1" configfile: str Path to the config file to read. Defaults to None, in which case the application's default config file is used. Returns:...
juraj-google-style
def _get_client_by_id(self, client_id): client = self.grr_api.Client(client_id) print('Checking for client approval') self._check_approval_wrapper(client, client.ListFlows) print('{0:s}: Client approval is valid'.format(client_id)) return client.Get()
Get GRR client dictionary and make sure valid approvals exist. Args: client_id: GRR client ID. Returns: GRR API Client object
juraj-google-style
def util_pattern_space(time_series, lag, dim): n = len(time_series) if ((lag * dim) > n): raise Exception('Result matrix exceeded size limit, try to change lag or dim.') elif (lag < 1): raise Exception('Lag should be greater or equal to 1.') pattern_space = np.empty(((n - (lag * (dim - 1...
Create a set of sequences with given lag and dimension Args: time_series: Vector or string of the sample data lag: Lag between beginning of sequences dim: Dimension (number of patterns) Returns: 2D array of vectors
codesearchnet
def get_resource(self, feature_column, name): del feature_column, name raise NotImplementedError('StateManager.get_resource')
Returns an already created resource. Resources can be things such as tables, variables, trackables, etc. Args: feature_column: A `FeatureColumn` object this variable corresponds to. name: Name of the resource.
github-repos
def create_bulk(self, resource, timeout=-1): uri = self.URI + '/bulk' default_values = self._get_default_values(self.BULK_DEFAULT_VALUES) updated_data = self._helper.update_resource_fields(resource, default_values) self._helper.create(updated_data, uri=uri, timeout=timeout) ...
Creates bulk Ethernet networks. Args: resource (dict): Specifications to create in bulk. timeout: Timeout in seconds. Wait for task completion by default. The timeout does not abort the operation in OneView; it just stops waiting for its completion. Returns: list: List of created Ethernet Networks.
juraj-google-style
def make(cls, name: str, ctx: 'context.Context', module: str, pyval_name: str | None=None) -> 'PyTDFunction': pyval = ctx.loader.lookup_pytd(module, pyval_name or name) if isinstance(pyval, pytd.Alias) and isinstance(pyval.type, pytd.Function): pyval = pyval.type pyval = pyval.Replace(name=f'{module...
Create a PyTDFunction. Args: name: The function name. ctx: The abstract context. module: The module that the function is in. pyval_name: Optionally, the name of the pytd.Function object to look up, if it is different from the function name. Returns: A new PyTDFunction.
github-repos
def _OpenFile(self, path): if (not self._registry_file_reader): return None return self._registry_file_reader.Open(path, ascii_codepage=self._ascii_codepage)
Opens a Windows Registry file. Args: path (str): path of the Windows Registry file. Returns: WinRegistryFile: Windows Registry file or None if not available.
codesearchnet
def annotate(self, sent): preds = [] words = [] for (word, fv) in self.sent2examples(sent): probs = self.predictor(fv) tags = probs.argsort() tag = self.ID_TAG[tags[(- 1)]] words.append(word) preds.append(tag) annotations = zip(words, preds) return annotations
Annotate a squence of words with entity tags. Args: sent: sequence of strings/words.
codesearchnet
def flush(cls, *args): return _remove_keys([], [((cls._make_key(args) if args else cls.PREFIX) + '*')])
Removes all keys of this namespace Without args, clears all keys starting with cls.PREFIX if called with args, clears keys starting with given cls.PREFIX + args Args: *args: Arbitrary number of arguments. Returns: List of removed keys.
codesearchnet
def save_data_files(vr, bs, prefix=None, directory=None): filename = '{}_band.dat'.format(prefix) if prefix else 'band.dat' directory = directory if directory else '.' filename = os.path.join(directory, filename) if bs.is_metal(): zero = vr.efermi else: zero = bs.get_vbm()['ene...
Write the band structure data files to disk. Args: vs (`Vasprun`): Pymatgen `Vasprun` object. bs (`BandStructureSymmLine`): Calculated band structure. prefix (`str`, optional): Prefix for data file. directory (`str`, optional): Directory in which to save the data. Returns: The filename of the written data file.
juraj-google-style
def get_variants(self, chromosome=None, start=None, end=None): query = {} if chromosome: query['chrom'] = chromosome if start: query['start'] = {'$lte': end} query['end'] = {'$gte': start} LOG.info("Find all variants {}".format(query)) ...
Return all variants in the database If no region is specified all variants will be returned. Args: chromosome(str) start(int) end(int) Returns: variants(Iterable(Variant))
juraj-google-style
def is_empty(self): for family in self.iter_package_families(): for pkg in self.iter_packages(family): return False return True
Determine if the repository contains any packages. Returns: True if there are no packages, False if there are at least one.
codesearchnet
def start(self, **kwargs): if not self.is_running(): self.websock_url = self.chrome.start(**kwargs) self.websock = websocket.WebSocketApp(self.websock_url) self.websock_thread = WebsockReceiverThread( self.websock, name='WebsockThread:%s' % self.c...
Starts chrome if it's not running. Args: **kwargs: arguments for self.chrome.start(...)
juraj-google-style
def persons_significant_control(self, num, statements=False, **kwargs): baseuri = (self._BASE_URI + 'company/{}/persons-with-significant-control'.format(num)) if (statements is True): baseuri += '-statements' res = self.session.get(baseuri, params=kwargs) self.handle_http_error(res) return r...
Search for a list of persons with significant control. Searches for persons of significant control based on company number for a specified company. Specify statements=True to only search for officers with statements. Args: num (str, int): Company number to search on. statements (Optional[bool]): Search only for perso...
codesearchnet
def GetRawDevice(path): path = CanonicalPathToLocalPath(path) try: path = win32file.GetLongPathName(path) except pywintypes.error: pass try: mount_point = win32file.GetVolumePathName(path) except pywintypes.error as details: logging.info('path not found. %s', details)...
Resolves the raw device that contains the path. Args: path: A path to examine. Returns: A pathspec to read the raw device as well as the modified path to read within the raw device. This is usually the path without the mount point. Raises: IOError: if the path does not exist or some unexpected behaviour occurs.
codesearchnet
async def set_headline(self, name, level, message): if (name not in self.services): raise ArgumentError('Unknown service name', short_name=name) self.services[name]['state'].set_headline(level, message) headline = self.services[name]['state'].headline.to_dict() (await self._notify_update(name, '...
Set the sticky headline for a service. Args: name (string): The short name of the service to query level (int): The level of the message (info, warning, error) message (string): The message contents
codesearchnet
def compute_shader(self, source) -> 'ComputeShader': res = ComputeShader.__new__(ComputeShader) res.mglo, ls1, ls2, ls3, ls4, res._glo = self.mglo.compute_shader(source) members = {} for item in ls1: obj = Uniform.__new__(Uniform) obj.mglo, obj._locati...
A :py:class:`ComputeShader` is a Shader Stage that is used entirely for computing arbitrary information. While it can do rendering, it is generally used for tasks not directly related to drawing. Args: source (str): The source of the compute shader. Returns: :py:class:`ComputeShader` object
juraj-google-style
def _RunAction(self, rule, client_id): actions_count = 0 try: if self._CheckIfHuntTaskWasAssigned(client_id, rule.hunt_id): logging.info( "Foreman: ignoring hunt %s on client %s: was started " "here before", client_id, rule.hunt_id) else: logging.info("F...
Run all the actions specified in the rule. Args: rule: Rule which actions are to be executed. client_id: Id of a client where rule's actions are to be executed. Returns: Number of actions started.
juraj-google-style
def dependency_of_fetches(fetches, op): try: from tensorflow.python.client.session import _FetchHandler as FetchHandler handler = FetchHandler(op.graph, fetches, {}) targets = tuple(handler.fetches() + handler.targets()) except ImportError: if isinstance(fetches, li...
Check that op is in the subgraph induced by the dependencies of fetches. fetches may have more general structure. Args: fetches: An argument to `sess.run`. Nested structure will affect performance. op (tf.Operation or tf.Tensor): Returns: bool: True if any of `fetches` depend on `op`.
juraj-google-style
def label_matrix_to_one_hot(L, k=None): n, m = L.shape if k is None: k = L.max() L_onehot = torch.zeros(n, m, k + 1) for i, row in enumerate(L): for j, k in enumerate(row): if k > 0: L_onehot[i, j, k - 1] = 1 return L_onehot
Converts a 2D [n,m] label matrix into an [n,m,k] one hot 3D tensor Note that in the returned 3D matrix, abstain votes continue to be represented by 0s, not 1s. Args: L: a [n,m] label matrix with categorical labels (0 = abstain) k: the number of classes that could appear in L if None, k is inferred as the max element ...
juraj-google-style
def _create_node(self, index: int, name: str, external_id: Optional[str] = None) -> SpotifyArtistNode: if external_id is None: graph: SpotifyArtistGraph = self._graph items: List[NameExternalIDPair] = graph.client.search_artists_by_name(name) for item in items: ...
Returns a new `SpotifyArtistNode` instance with the given index and name. Arguments: index (int): The index of the node to create. name (str): The name of the node to create. external_id (Optional[str]): The external ID of the node.
juraj-google-style
def GetZipInfoByPathSpec(self, path_spec): location = getattr(path_spec, 'location', None) if location is None: raise errors.PathSpecError('Path specification missing location.') if not location.startswith(self.LOCATION_ROOT): raise errors.PathSpecError('Invalid location in path specificat...
Retrieves the ZIP info for a path specification. Args: path_spec (PathSpec): a path specification. Returns: zipfile.ZipInfo: a ZIP info object or None if not available. Raises: PathSpecError: if the path specification is incorrect.
juraj-google-style
def crscode_to_string(codetype, code, format): link = 'http: result = urllib2.urlopen(link).read() if not isinstance(result, str): result = result.decode() return result
Lookup crscode on spatialreference.org and return in specified format. Arguments: - *codetype*: "epsg", "esri", or "sr-org". - *code*: The code. - *format*: The crs format of the returned string. One of "ogcwkt", "esriwkt", or "proj4", but also several others... Returns: - Crs string in the specified format.
juraj-google-style
def micros_to_timestamp(micros, timestamp): seconds = long((micros / _MICROS_PER_SECOND)) micro_remainder = (micros % _MICROS_PER_SECOND) timestamp.seconds = seconds timestamp.nanos = (micro_remainder * _NANOS_PER_MICRO)
Convert microseconds from utc epoch to google.protobuf.timestamp. Args: micros: a long, number of microseconds since utc epoch. timestamp: a google.protobuf.timestamp.Timestamp to populate.
codesearchnet
def activate_backup_image(reset=False): dn = "sys/rack-unit-1/mgmt/fw-boot-def/bootunit-combined" r = "no" if reset is True: r = "yes" inconfig = .format(r) ret = __proxy__['cimc.set_config_modify'](dn, inconfig, False) return ret
Activates the firmware backup image. CLI Example: Args: reset(bool): Reset the CIMC device on activate. .. code-block:: bash salt '*' cimc.activate_backup_image salt '*' cimc.activate_backup_image reset=True
juraj-google-style
def update(self, grads): grads = nest.flatten(grads) if distribute_lib.has_strategy() and distribute_lib.in_cross_replica_context(): distribution = distribute_lib.get_strategy() is_finite_per_replica = distribution.extended.call_for_each_replica(_is_all_finite, args=(grads,)) is_finite =...
Updates the value of the loss scale. Args: grads: A nested structure of unscaled gradients, each which is an all-reduced gradient of the loss with respect to a weight. Returns: update_op: In eager mode, None. In graph mode, an op to update the loss scale. should_apply_gradients: Either a bool or a scalar boolean tens...
github-repos
def decode(self, ids): _, tmp_file_path = tempfile.mkstemp() wavfile.write(tmp_file_path, self._sample_rate, np.asarray(ids)) return tmp_file_path
Transform a sequence of float32 into a waveform. Args: ids: list of integers to be converted. Returns: Path to the temporary file where the waveform was saved. Raises: ValueError: if the ids are not of the appropriate size.
juraj-google-style
def removeTags(dom): try: string_type = basestring except NameError: string_type = str element_stack = None if (type(dom) in [list, tuple]): element_stack = dom elif isinstance(dom, HTMLElement): element_stack = (dom.childs if dom.isTag() else [dom]) elif isinstan...
Remove all tags from `dom` and obtain plaintext representation. Args: dom (str, obj, array): str, HTMLElement instance or array of elements. Returns: str: Plain string without tags.
codesearchnet
def find(self, title): if title not in self._titles: raise KeyError(title) return self._titles[title][0]
Return the first worksheet with the given title. Args: title(str): title/name of the worksheet to return Returns: WorkSheet: contained worksheet object Raises: KeyError: if the spreadsheet has no no worksheet with the given ``title``
juraj-google-style
def get_processid(config): pidfile = config.get('daemon', 'pidfile', fallback=None) if pidfile is None: raise ValueError("Configuration doesn't have pidfile option!") try: with open(pidfile, 'r') as _file: pid = _file.read().rstrip() try: pid = i...
Return process id of anycast-healthchecker. Arguments: config (obj): A configparser object with the configuration of anycast-healthchecker. Returns: The process id found in the pid file Raises: ValueError in the following cases - pidfile option is missing from the configuration - pid is either -1 or 1 - stale pidfil...
juraj-google-style
def _read_file(file_name): with open(file_name) as config_file: data = json.load(config_file) return data
Read the file content and load it as JSON. Arguments: file_name (:py:class:`str`): The filename. Returns: :py:class:`dict`: The loaded JSON data. Raises: :py:class:`FileNotFoundError`: If the file is not found.
juraj-google-style
def _get_first_approximation(self): equalities = set(chain((implication.extract_equalities() for _, _, implication in self._iter_implications()))).union(self.ground_truth.extract_equalities()) var_assignments = {} value_assignments = {} for var in self.variables: var_assignments[var] = {var} ...
Get all (variable, value) combinations to consider. This gets the (variable, value) combinations that the solver needs to consider based on the equalities that appear in the implications. E.g., with the following implication: t1 = v1 => t1 = t2 | t3 = v2 the combinations to consider are (t1, v1) because t1 = v1 appear...
github-repos
def __getattr__(self, attr): if not self._protocol: raise usb_exceptions.HandleClosedError() val = getattr(self._protocol, attr) if callable(val): def _retry_wrapper(*args, **kwargs): result = _retry_usb_function(self._num_retries, val, *args, **kwargs) _LOG.debu...
Fallthrough to underlying FastbootProtocol handler. Args: attr: Attribute to get. Returns: Either the attribute from the device or a retrying function-wrapper if attr is a method on the device.
juraj-google-style
def _get_tensors_for_gradient(x): if not isinstance(x, composite_tensor.CompositeTensor): return x if not isinstance(x, CompositeTensorGradientProtocol): raise ValueError(f'Type {type(x).__name__} is not supported as a gradient source or gradient target.') composite_gradient = x.__composite_...
Returns the Tensors in `x` that should be differentiated. Args: x: A `Tensor` or `CompositeTensor`. Returns: A `Tensor` or a nested structure of `Tensor`.
github-repos
def add_output(self, name, value): self.template.add_output(Output(name, Value=value))
Simple helper for adding outputs. Args: name (str): The name of the output to create. value (str): The value to put in the output.
juraj-google-style
def _parse_hparams(hparams): prefixes = ["agent_", "optimizer_", "runner_", "replay_buffer_"] ret = [] for prefix in prefixes: ret_dict = {} for key in hparams.values(): if prefix in key: par_name = key[len(prefix):] ret_dict[par_name] = hparams.get(key) ret.append(ret_dict) ...
Split hparams, based on key prefixes. Args: hparams: hyperparameters Returns: Tuple of hparams for respectably: agent, optimizer, runner, replay_buffer.
juraj-google-style
def release(self, subnets): if (isinstance(subnets, str) or isinstance(subnets, IPNetwork)): subnets = [subnets] subnets_iter = ((str(subnet) if isinstance(subnet, IPNetwork) else subnet) for subnet in subnets) try: with self._create_lock(): for subnet in subnets_iter: ...
Free the lease of the given subnets Args: subnets (list of str or netaddr.IPAddress): dotted ipv4 subnet in CIDR notation (for example ```192.168.200.0/24```) or IPAddress object. Raises: LagoSubnetLeaseException: If subnet is a str and can't be parsed LagoSubnetLeaseLockException: If the lock to self.path can't be a...
codesearchnet
def read_from_tfrecord(file_pattern: str, coder: Optional[coders.BytesCoder]=coders.BytesCoder(), compression_type: str='AUTO', validate: Optional[bool]=True): return ReadFromTFRecord(file_pattern=file_pattern, compression_type=getattr(CompressionTypes, compression_type), validate=validate) | beam.Map(lambda s: bea...
Reads data from TFRecord. Args: file_pattern (str): A file glob pattern to read TFRecords from. coder (coders.BytesCoder): Coder used to decode each record. compression_type (CompressionTypes): Used to handle compressed input files. Default value is CompressionTypes.AUTO, in which case the file_path's extension will b...
github-repos
def parse_genetic_models(models_info, case_id): genetic_models = [] if models_info: for family_info in models_info.split(','): splitted_info = family_info.split(':') if (splitted_info[0] == case_id): genetic_models = splitted_info[1].split('|') return genetic_...
Parse the genetic models entry of a vcf Args: models_info(str): The raw vcf information case_id(str) Returns: genetic_models(list)
codesearchnet
def get_average_voltage(self, min_voltage=None, max_voltage=None): pairs_in_range = self._select_in_voltage_range(min_voltage, max_voltage) if len(pairs_in_range) == 0: return 0 total_cap_in_range = sum([p.mAh for p in p...
Average voltage for path satisfying between a min and max voltage. Args: min_voltage (float): The minimum allowable voltage for a given step. max_voltage (float): The maximum allowable voltage allowable for a given step. Returns: Average voltage in V across the insertion path (a subset of the path can be chosen by th...
juraj-google-style
def authorization_code_pkce(self, client_id, code_verifier, code, redirect_uri, grant_type='authorization_code'): return self.post('https:
Authorization code pkce grant This is the OAuth 2.0 grant that mobile apps utilize in order to access an API. Use this endpoint to exchange an Authorization Code for a Token. Args: grant_type (str): Denotes the flow you're using. For authorization code pkce use authorization_code client_id (str): your application's ...
codesearchnet
def get_policies_from_aws(client, scope='Local'): done = False marker = None policies = [] while (not done): if marker: response = client.list_policies(Marker=marker, Scope=scope) else: response = client.list_policies(Scope=scope) policies += response['Pol...
Returns a list of all the policies currently applied to an AWS Account. Returns a list containing all the policies for the specified scope Args: client (:obj:`boto3.session.Session`): A boto3 Session object scope (`str`): The policy scope to use. Default: Local Returns: :obj:`list` of `dict`
codesearchnet
def events_from_file(filepath): records = list(tf_record.tf_record_iterator(filepath)) result = [] for r in records: event = event_pb2.Event() event.ParseFromString(r) result.append(event) return result
Returns all events in a single event file. Args: filepath: Path to the event file. Returns: A list of all tf.compat.v1.Event protos in the event file.
github-repos
def _TopKGrad(op: ops.Operation, grad, _): in_shape = array_ops.shape(op.inputs[0]) ind_shape = array_ops.shape(op.outputs[1]) ind_lastdim = array_ops.gather(math_ops.cast(ind_shape, dtypes.int64), array_ops.size(ind_shape) - 1) ind_2d = array_ops.reshape(op.outputs[1], array_ops_stack.stack([-1, ind_la...
Return the gradients for TopK. Args: op: The TopKOp for which we need to generate gradients. grad: Tensor. The gradients passed to the TopKOp. Returns: A list of two tensors, the first being the gradient w.r.t to the input and TopK, and the second being the gradient w.r.t. to the indices (all zero).
github-repos
def fmt_addr_raw(addr, reverse=True): addr = addr.replace(':', '') raw_addr = [int(addr[i:i+2], 16) for i in range(0, len(addr), 2)] if reverse: raw_addr.reverse() if sys.version_info[0] == 2: return str(bytearray(raw_addr)) return bytearray(raw_addr)
Given a string containing a xx:xx:xx:xx:xx:xx address, return as a byte sequence. Args: addr (str): Bluetooth address in xx:xx:xx:xx:xx:xx format. reverse (bool): True if the byte ordering should be reversed in the output. Returns: A bytearray containing the converted address.
juraj-google-style
def read_dftbp(filename): infile = open(filename, 'r') lines = infile.readlines() for ss in lines: if ss.strip().startswith(' lines.remove(ss) natoms = int(lines[0].split()[0]) symbols = lines[1].split() if (lines[0].split()[1].lower() == 'f'): is_scale...
Reads DFTB+ structure files in gen format. Args: filename: name of the gen-file to be read Returns: atoms: an object of the phonopy.Atoms class, representing the structure found in filename
juraj-google-style
def migrate_database(adapter): all_variants = adapter.get_variants() nr_variants = all_variants.count() nr_updated = 0 with progressbar(all_variants, label="Updating variants", length=nr_variants) as bar: for variant in bar: if 'chrom' in variant: ...
Migrate an old loqusdb instance to 1.0 Args: adapter Returns: nr_updated(int): Number of variants that where updated
juraj-google-style
def str_internal(self, is_recursive=False): printable_name = self.__class__.__name__ if hasattr(self, 'step_name'): printable_name += ' %s' % self.name_context.logging_name() if is_recursive: return '<%s>' % printable_name if self.spec is None: printable_fields = [] e...
Internal helper for __str__ that supports recursion. When recursing on receivers, keep the output short. Args: is_recursive: whether to omit some details, particularly receivers. Returns: Compact string representing this object.
github-repos
def create_handler(Model, name=None, **kwds): async def action_handler(service, action_type, payload, props, notify=True, **kwds): if (action_type == get_crud_action('create', (name or Model))): try: message_props = {} if ('correlation_id' in props): ...
This factory returns an action handler that creates a new instance of the specified model when a create action is recieved, assuming the action follows nautilus convetions. Args: Model (nautilus.BaseModel): The model to create when the action received. Returns: function(action_type, payload): The action handler for t...
codesearchnet
async def iter(self, url: Union[(str, methods)], data: Optional[MutableMapping]=None, headers: Optional[MutableMapping]=None, *, limit: int=200, iterkey: Optional[str]=None, itermode: Optional[str]=None, minimum_time: Optional[int]=None, as_json: Optional[bool]=None) -> AsyncIterator[dict]: itervalue = None if ...
Iterate over a slack API method supporting pagination When using :class:`slack.methods` the request is made `as_json` if available Args: url: :class:`slack.methods` or url string data: JSON encodable MutableMapping headers: limit: Maximum number of results to return per call. iterkey: Key in response data to iterate ...
codesearchnet
def get_object_metadata(self, request): file_ = self.get_file(request.bucket, request.object) return file_.get_metadata()
Retrieves an object's metadata. Args: request: (GetRequest) input message Returns: (Item) The response message.
github-repos
def should_stop_early(self) -> bool: if not self._trial.measurements: return False return self._should_stop_early_fn(self._trial)
Tells whether current trial should be stopped early. In `pg.sample`, an optional `EarlyStoppingPolicy` can be provided, which is useful for terminating trials which are progressive evaluated. Progressive evaluation on examples can be achieved by calling `feedback.add_measurement` multiple times at different steps. In-...
github-repos
def _load_partition_graphs(self, client_partition_graphs, validate): self._debug_graphs = {} self._node_devices = {} partition_graphs_and_device_names = [] for device_name in self._device_names: partition_graph = None if device_name in self._dump_graph_file_paths: partition_g...
Load and process partition graphs. Load the graphs; parse the input and control input structure; obtain the device and op type of each node; remove the Copy and debug ops inserted by the debugger. The gathered information can be used to validate the tensor dumps. Args: client_partition_graphs: A repeated field of Gra...
github-repos
def quantize(self, input_grid): pixels = {} for i in range(self.max_bin+1): pixels[i] = [] data = (np.array(input_grid, dtype=int) - self.min_thresh) / self.data_increment data[data < 0] = -1 data[data > self.max_bin] = self.max_bin good_points = np....
Quantize a grid into discrete steps based on input parameters. Args: input_grid: 2-d array of values Returns: Dictionary of value pointing to pixel locations, and quantized 2-d array of data
juraj-google-style
def _VerifyValues(self, tensor_in_sizes, filter_in_sizes, stride, padding, expected, data_format, dtype, use_gpu, op_name): if use_gpu and (not test.is_gpu_available(cuda_only=True)): self.skipTest('GPU not available') results = [] result = self._SetupValuesForDevice(tensor_in_sizes, filter_in_sizes...
Verifies the output values of the convolution function. Args: tensor_in_sizes: Input tensor dimensions [batch, input_x, input_y, input_z, input_depth]. filter_in_sizes: Filter tensor dimensions [kernel_x, kernel_y, kernel_z, input_depth, output_depth]. stride: [x_stride, y_stride, z_stride] padding: Padding type. expe...
github-repos
def alias_inplace_update(x, i, v): return _inplace_helper(x, i, v, gen_array_ops.inplace_update)
Applies an inplace update on input x at index i with value v. Aliases x. If i is None, x and v must be the same shape. Computes x = v; If i is a scalar, x has a rank 1 higher than v's. Computes x[i, :] = v; Otherwise, x and v must have the same rank. Computes x[i, :] = v; Args: x: A Tensor. i: None, a scalar or a vec...
github-repos
def parse_location(location): def split_dms(text, hemisphere): 'Split degrees, minutes and seconds string.\n\n Args:\n text (str): Text to split\n\n Returns::\n float: Decimal degrees\n ' out = [] sect = [] for i in text: if i.i...
Parse latitude and longitude from string location. Args: location (str): String to parse Returns: tuple of float: Latitude and longitude of location
codesearchnet
def _validate_testbed_name(name): if not name: raise MoblyConfigError("Test bed names can't be empty.") name = str(name) for char in name: if char not in utils.valid_filename_chars: raise MoblyConfigError('Char "%s" is not allowed in test bed names.' % char)
Validates the name of a test bed. Since test bed names are used as part of the test run id, it needs to meet certain requirements. Args: name: The test bed's name specified in config file. Raises: MoblyConfigError: The name does not meet any criteria.
github-repos
def write(self, session, directory, name, replaceParamFile=None, **kwargs): name_split = name.split('.') name = name_split[0] extension = '' if (len(name_split) >= 2): extension = name_split[(- 1)] try: name = self._namePreprocessor(name) except: 'DO NOTHING' if (exte...
Write from database back to file. Args: session (:mod:`sqlalchemy.orm.session.Session`): SQLAlchemy session object bound to PostGIS enabled database. directory (str): Directory where the file will be written. name (str): The name of the file that will be created (including the file extension is optional). replaceParam...
codesearchnet
def rotate(self, image, angle, resample=None, expand=0, center=None, translate=None, fillcolor=None): resample = resample if resample is not None else PIL.Image.NEAREST self._ensure_format_supported(image) if not isinstance(image, PIL.Image.Image): image = self.to_pil_image(image) return image.r...
Returns a rotated copy of `image`. This method returns a copy of `image`, rotated the given number of degrees counter clockwise around its centre. Args: image (`PIL.Image.Image` or `np.ndarray` or `torch.Tensor`): The image to rotate. If `np.ndarray` or `torch.Tensor`, will be converted to `PIL.Image.Image` before rot...
github-repos
def true_num_genes(model, custom_spont_id=None): true_num = 0 for gene in model.genes: if not is_spontaneous(gene, custom_id=custom_spont_id): true_num += 1 return true_num
Return the number of genes in a model ignoring spontaneously labeled genes. Args: model (Model): custom_spont_id (str): Optional custom spontaneous ID if it does not match the regular expression ``[Ss](_|)0001`` Returns: int: Number of genes excluding spontaneous genes
juraj-google-style
def create_analyzer_ui(debug_dump, tensor_filters=None, ui_type='readline', on_ui_exit=None, config=None): if config is None: config = cli_config.CLIConfig() analyzer = DebugAnalyzer(debug_dump, config=config) if tensor_filters: for tensor_filter_name in tensor_filters: analyzer....
Create an instance of ReadlineUI based on a DebugDumpDir object. Args: debug_dump: (debug_data.DebugDumpDir) The debug dump to use. tensor_filters: (dict) A dict mapping tensor filter name (str) to tensor filter (Callable). ui_type: (str) requested UI type, only "readline" is supported. on_ui_exit: (`Callable`) the ca...
github-repos
def gremove(pattern): for item in glob.glob(pattern): if not remove(item): return False return True
Remove all file found by glob.glob(pattern). Args: pattern (str): Pattern of files to remove Returns: bool: True if the operation is successful, False otherwise.
juraj-google-style
def monitoring_helper(service_addr, duration_ms, monitoring_level, num_queries): if monitoring_level <= 0 or monitoring_level > 2: sys.exit('Please choose a monitoring level between 1 and 2.') for query in range(0, num_queries): res = profiler_client.monitor(service_addr, duration_ms, monitoring...
Helper function to print monitoring results. Helper function to print monitoring results for num_queries times. Args: service_addr: Address of the TPU profiler service. duration_ms: Duration of one monitoring sample in milliseconds. monitoring_level: An integer between 1 and 2. Level 2 is more verbose than level 1 an...
github-repos
def attach_template(self, _template, _key, **unbound_var_values): if (_key in unbound_var_values): raise ValueError(('%s specified twice.' % _key)) unbound_var_values[_key] = self return _template.as_layer().construct(**unbound_var_values)
Attaches the template to this such that _key=this layer. Note: names were chosen to avoid conflicts with any likely unbound_var keys. Args: _template: The template to construct. _key: The key that this layer should replace. **unbound_var_values: The values for the unbound_vars. Returns: A new layer with operation app...
codesearchnet
def needs_keras_history(tensors, ignore_call_context=False): input_tensors = nest.flatten(tensors) if call_context().in_call and (not ignore_call_context): return False if all((getattr(tensor, '_keras_history', None) is not None for tensor in input_tensors)): return False return uses_ker...
Check if any Tensors need to be wrapped in TensorFlowOpLayers. This will never return True inside a sublayer, because sublayers do not need to create Keras History. Otherwise, this returns True if one or more of `tensors` originates from a `keras.Input` and does not have `_keras_history` set. Args: tensors: An arbitr...
github-repos
def recipe_sdf_to_bigquery(config, auth_write, partner_id, file_types, filter_type, filter_ids, dataset, version, table_suffix, time_partitioned_table, create_single_day_table): dataset(config, {'auth': auth_write, 'dataset': dataset}) sdf(config, {'auth': 'user', 'version': version, 'partner_id': partner_id, '...
Download SDF reports into a BigQuery table. Args: auth_write (authentication) - Credentials used for writing data. partner_id (integer) - The sdf file types. file_types (string_list) - The sdf file types. filter_type (choice) - The filter type for the filter ids. filter_ids (integer_list) - Comma separated list of fil...
github-repos
def reflection(normal, origin=(0, 0, 0)): n = (np.array(normal, dtype=float) / np.linalg.norm(normal)) (u, v, w) = n translation = np.eye(4) translation[(0:3, 3)] = (- np.array(origin)) xx = (1 - (2 * (u ** 2))) yy = (1 - (2 * (v ** 2))) zz = (1 - (2 * (w ** 2))) xy = (((- 2) * u) * v) ...
Returns reflection symmetry operation. Args: normal (3x1 array): Vector of the normal to the plane of reflection. origin (3x1 array): A point in which the mirror plane passes through. Returns: SymmOp for the reflection about the plane
codesearchnet
def area_frac_vs_chempot_plot(self, ref_delu, chempot_range, delu_dict=None, delu_default=0, increments=10, no_clean=False, no_doped=False): delu_dict = (delu_dict if delu_dict else {}) chempot_range = sorted(chempot_range) all_chempots = np.linspace(min(chempot_range), max(chempot_range), increments) h...
1D plot. Plots the change in the area contribution of each facet as a function of chemical potential. Args: ref_delu (sympy Symbol): The free variable chempot with the format: Symbol("delu_el") where el is the name of the element. chempot_range (list): Min/max range of chemical potential to plot along delu_dict (Dict)...
codesearchnet