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def evaluate(self, expression): dump_tensors_iter = re.finditer(_DUMP_TENSOR_PATTERN, expression) rewritten_expression = expression for match in reversed(list(dump_tensors_iter)): tensor_name = match.group(0)[1:-1].strip() device_name, node_name, output_slot, debug_op, exec_index = _parse_de...
Parse an expression. Args: expression: the expression to be parsed. Returns: The result of the evaluation. Raises: ValueError: If the value of one or more of the debug tensors in the expression are not available.
github-repos
def replace_drive_enclosure(self, information): uri = '{}/replaceDriveEnclosure'.format(self.data['uri']) result = self._helper.create(information, uri) self.refresh() return result
When a drive enclosure has been physically replaced, initiate the replacement operation that enables the new drive enclosure to take over as a replacement for the prior drive enclosure. The request requires specification of both the serial numbers of the original drive enclosure and its replacement to be provided. Arg...
codesearchnet
def get_parsed_context(pipeline, context_in_string): logger.debug('starting') if ('context_parser' in pipeline): parser_module_name = pipeline['context_parser'] logger.debug(f'context parser found: {parser_module_name}') parser_module = pypyr.moduleloader.get_module(parser_module_name) ...
Execute get_parsed_context handler if specified. Dynamically load the module specified by the context_parser key in pipeline dict and execute the get_parsed_context function on that module. Args: pipeline: dict. Pipeline object. context_in_string: string. Argument string used to initialize context. Returns: pypyr.co...
codesearchnet
def patch_on_type(src: symbolic.Symbolic, value_type: Union[Type[Any], Tuple[Type[Any], ...]], value: Any=None, value_fn: Optional[Callable[[Any], Any]]=None, skip_notification: Optional[bool]=None) -> Any: return _conditional_patch(src, lambda k, v, p: isinstance(v, value_type), value, value_fn, skip_notification)
Recursively patch values on matched types. Example:: d = pg.Dict(a={'x': 1}, b=2) print(pg.patching.patch_on_type(d, int, value_fn=lambda x: x * 2)) # {a={x=2}, b=4} Args: src: symbolic value to patch. value_type: Value type to match. value: New value for field that satisfy `condition`. value_fn: Callable object tha...
github-repos
def create_van_der_corput_samples(idx, number_base=2): assert number_base > 1 idx = numpy.asarray(idx).flatten() + 1 out = numpy.zeros(len(idx), dtype=float) base = float(number_base) active = numpy.ones(len(idx), dtype=bool) while numpy.any(active): out[active] += (idx[active] % ...
Van der Corput samples. Args: idx (int, numpy.ndarray): The index of the sequence. If array is provided, all values in array is returned. number_base (int): The numerical base from where to create the samples from. Returns (float, numpy.ndarray): Van der Corput samples.
juraj-google-style
def anti_clobber_dir_path(dir_path, suffix='.d'): dir_path = os.path.normpath(dir_path) parts = dir_path.split(os.sep) for index in range(len(parts)): test_path = os.sep.join(parts[:(index + 1)]) if os.path.isfile(test_path): parts[index] += suffix return os.sep.join(...
Return a directory path free of filenames. Args: dir_path (str): A directory path. suffix (str): The suffix to append to the part of the path that is a file. Returns: str
codesearchnet
def _watch(self, primals, tangents): def _watch(primal, tangent): if not primal.dtype.is_floating: logging.log_first_n(logging.WARN, 'The dtype of the watched primal must be floating (e.g. tf.float32), got %r', 5, primal.dtype) tangent = ops.convert_to_tensor(tangent, dtype=primal.dtype...
Ensures that `primals` are being traced by this accumulator. Mathematically, `tangents` is a vector right-multiplying the Jacobian matrix (a Jacobian-vector product) for the function computed while this accumulator is active. Since JVPs are computed in forward mode as the computation happens, this vector must be suppl...
github-repos
def download(self, temp_ver, store_metadata=True): dest = self._prefixed(temp_ver.name) temp_dest = ('%s.tmp' % dest) with utils.LockFile((dest + '.lock')): if os.path.exists(dest): return temp_ver.download(temp_dest) if store_metadata: with open(('%s.metadata...
Retrieve the given template version Args: temp_ver (TemplateVersion): template version to retrieve store_metadata (bool): If set to ``False``, will not refresh the local metadata with the retrieved one Returns: None
codesearchnet
def fit(weights: Array, train_dataset: Dataset, iters: int, learning_rate: float, log_span: int, val_dataset: typing.Optional[Dataset]=None) -> Array: grad_loss = jit(grad(cross_entropy_loss, argnums=0)) for t in range(iters): weights = weights - learning_rate * grad_loss(weights, train_dataset.X, train...
Updates the weights with the given dataset. Args: weights: A weight vector. train_dataset: A train dataset. iters: A number of iterations. learning_rate: A learning rate. log_span: A span to log metrics. val_dataset: A validation dataset (optional). Returns: An updated weight vector.
github-repos
def run_conditional_decorators(self, context): logger.debug('starting') run_me = context.get_formatted_as_type(self.run_me, out_type=bool) skip_me = context.get_formatted_as_type(self.skip_me, out_type=bool) swallow_me = context.get_formatted_as_type(self.swallow_me, out_type=bool) if run_me: ...
Evaluate the step decorators to decide whether to run step or not. Use pypyr.dsl.Step.run_step if you intend on executing the step the same way pypyr does. Args: context: (pypyr.context.Context) The pypyr context. This arg will mutate.
codesearchnet
def add_input(self, **kwargs): self._closed() def _get_item(args): 'Get a single item from args.' if (not args): raise ValueError('No parameter specified.') item = args.popitem() if args: raise ValueError('Too many parameters, not clear what to do with {}...
Add workflow input. Args: kwargs (dict): A dict with a `name: type` item and optionally a `default: value` item, where name is the name (id) of the workflow input (e.g., `dir_in`) and type is the type of the input (e.g., `'Directory'`). The type of input parameter can be learned from `step.inputs(step_name=input_name)...
codesearchnet
def flowshow(flow, win_name='', wait_time=0): flow = flowread(flow) flow_img = flow2rgb(flow) imshow(rgb2bgr(flow_img), win_name, wait_time)
Show optical flow. Args: flow (ndarray or str): The optical flow to be displayed. win_name (str): The window name. wait_time (int): Value of waitKey param.
juraj-google-style
def unstem(self, term): originals = [] for i in self.terms[term]: originals.append(self.tokens[i]['unstemmed']) mode = Counter(originals).most_common(1) return mode[0][0]
Given a stemmed term, get the most common unstemmed variant. Args: term (str): A stemmed term. Returns: str: The unstemmed token.
juraj-google-style
def find_invalid_filenames(filenames, repository_root): errors = [] for filename in filenames: if (not os.path.abspath(filename).startswith(repository_root)): errors.append((filename, ('Error: File %s does not belong to repository %s' % (filename, repository_root)))) if (not os.path....
Find files that does not exist, are not in the repo or are directories. Args: filenames: list of filenames to check repository_root: the absolute path of the repository's root. Returns: A list of errors.
codesearchnet
def __init__(self, **kwargs) -> 'PygalleBaseClass': self.options = kwargs self.init_properties() \ .set_uid() \ .set_class_name() \ .set_category()
Create a new instance of :class:`PygalleBaseClass` # Arguments args: kwargs: # Returns: PygalleBaseClass: An instance of :class:`PygalleBaseClass`
juraj-google-style
def reciprocal_lattice_from_outcar( filename ): outcar = open(filename, "r").read() recLat = re.findall(r"reciprocal\s*lattice\s*vectors\s*([-.\s\d]*)", outcar)[-1] recLat = recLat.split() recLat = np.array(recLat, dtype=float) recLat.shape = (3, 6) recLat...
Finds and returns the reciprocal lattice vectors, if more than one set present, it just returns the last one. Args: filename (Str): The name of the outcar file to be read Returns: List(Float): The reciprocal lattice vectors.
juraj-google-style
class Speech2Text2Processor(ProcessorMixin): feature_extractor_class = 'AutoFeatureExtractor' tokenizer_class = 'Speech2Text2Tokenizer' def __init__(self, feature_extractor, tokenizer): super().__init__(feature_extractor, tokenizer) self.current_processor = self.feature_extractor se...
Constructs a Speech2Text2 processor which wraps a Speech2Text2 feature extractor and a Speech2Text2 tokenizer into a single processor. [`Speech2Text2Processor`] offers all the functionalities of [`AutoFeatureExtractor`] and [`Speech2Text2Tokenizer`]. See the [`~Speech2Text2Processor.__call__`] and [`~Speech2Text2Proce...
github-repos
def report_filter(config, auth, body, filters): new_body = body.copy() for f, d in filters.items(): for v in get_rows(config, auth, d): new_body['params'].setdefault('filters', []).append({'type': f, 'value': v}) return new_body
Adds filters to a report body Filters cannot be easily added to the reports without templateing, this allows filters to be passed as lists. Values are specified using get_rows(...) helper, see starthinker/util/data/__init__.py. To specify a filter, use the official filter name and a list of values. For exmaple: ``` ...
github-repos
def get_percentage_volume_change(self): initial_vol = self.initial.lattice.volume final_vol = self.final.lattice.volume return ((final_vol / initial_vol) - 1)
Returns the percentage volume change. Returns: Volume change in percentage, e.g., 0.055 implies a 5.5% increase.
codesearchnet
def stat(self, follow_symlinks=True): if follow_symlinks: if self._statresult_symlink is None: file_object = self._filesystem.resolve(self.path) if self._filesystem.is_windows_fs: file_object.st_nlink = 0 self._statresult_s...
Return a stat_result object for this entry. Args: follow_symlinks: If False and the entry is a symlink, return the result for the symlink, otherwise for the object it points to.
juraj-google-style
def build_model(self, token_encoder_model, trainable_embeddings=True, output_activation='softmax'): if (not isinstance(token_encoder_model, SequenceEncoderBase)): raise ValueError('`token_encoder_model` should be an instance of `{}`'.format(SequenceEncoderBase)) if ((not token_encoder_model.allows_dynam...
Builds a model using the given `text_model` Args: token_encoder_model: An instance of `SequenceEncoderBase` for encoding all the tokens within a document. This encoding is then fed into a final `Dense` layer for classification. trainable_embeddings: Whether or not to fine tune embeddings. output_activation: The output...
codesearchnet
def where(self, predicate): if self.closed(): raise ValueError('Attempt to call where() on a closed Queryable.') if (not is_callable(predicate)): raise TypeError('where() parameter predicate={predicate} is not callable'.format(predicate=repr(predicate))) return self._create(ifilter(predicate...
Filters elements according to whether they match a predicate. Note: This method uses deferred execution. Args: predicate: A unary function which is applied to each element in the source sequence. Source elements for which the predicate returns True will be present in the result. Returns: A Queryable over those eleme...
codesearchnet
def call(self, *args, **kwargs): if (not self.is_connected()): if self.autoconnect: return self._call_with_autoconnect(*args, **kwargs) else: error = ConnectionError('you are not connected and autoconnect=False') return tornado.gen.maybe_future(error) return s...
Calls a redis command and returns a Future of the reply. Args: *args: full redis command as variable length argument list or a Pipeline object (as a single argument). **kwargs: internal private options (do not use). Returns: a Future with the decoded redis reply as result (when available) or a ConnectionError object ...
codesearchnet
def patch_addPadding(self, patches): paddingLength = self.Patch_Margin nullPadding = "" for x in range(1, paddingLength + 1): nullPadding += chr(x) for patch in patches: patch.start1 += paddingLength patch.start2 += paddingLength patch = patches[0] diffs = patc...
Add some padding on text start and end so that edges can match something. Intended to be called only from within patch_apply. Args: patches: Array of Patch objects. Returns: The padding string added to each side.
juraj-google-style
def _parse_flowcontrol_receive(self, config): value = 'off' match = re.search(r'flowcontrol receive (\w+)$', config, re.M) if match: value = match.group(1) return dict(flowcontrol_receive=value)
Scans the config block and returns the flowcontrol receive value Args: config (str): The interface config block to scan Returns: dict: Returns a dict object with the flowcontrol receive value retrieved from the config block. The returned dict object is intended to be merged into the interface resource dict
juraj-google-style
def plot(self, tag, mpl_plt, step=None, close_plot=True): if (step is None): step = self._step else: self._step = step fig = mpl_plt.get_current_fig_manager() (img_w, img_h) = fig.canvas.get_width_height() image_buf = io.BytesIO() mpl_plt.savefig(image_buf, format='png') imag...
Saves matplotlib plot output to summary image. Args: tag: str: label for this data mpl_plt: matplotlib stateful pyplot object with prepared plotting state step: int: training step close_plot: bool: automatically closes plot
codesearchnet
def uncompress(element, output_spec): flat_types = structure.get_flat_tensor_types(output_spec) flat_shapes = structure.get_flat_tensor_shapes(output_spec) tensor_list = ged_ops.uncompress_element(element, output_types=flat_types, output_shapes=flat_shapes) return structure.from_tensor_list(output_spec,...
Uncompress a compressed dataset element. Args: element: A scalar variant tensor to uncompress. The element should have been created by calling `compress`. output_spec: A nested structure of `tf.TypeSpec` representing the type(s) of the uncompressed element. Returns: The uncompressed element.
github-repos
def get_mim_genes(genemap_lines, mim2gene_lines): LOG.info("Get the mim genes") genes = {} hgnc_genes = {} gene_nr = 0 no_hgnc = 0 for entry in parse_mim2gene(mim2gene_lines): if 'gene' in entry['entry_type']: mim_nr = entry['mim_number'] gene_...
Get a dictionary with genes and their omim information Args: genemap_lines(iterable(str)) mim2gene_lines(iterable(str)) Returns. hgnc_genes(dict): A dictionary with hgnc_symbol as keys
juraj-google-style
def are_values_same_type(first_val, second_val): first_val_type = type(first_val) second_val_type = type(second_val) if (isinstance(first_val, string_types) and isinstance(second_val, string_types)): return True if (isinstance(first_val, bool) or isinstance(second_val, bool)): return (fi...
Method to verify that both values belong to same type. Float and integer are considered as same type. Args: first_val: Value to validate. second_Val: Value to validate. Returns: Boolean: True if both values belong to same type. Otherwise False.
codesearchnet
def _url_dirname(self, url_or_path): return os.path.dirname(url_or_path)
Pass through to os.path.dirname. This version uses os.path instead of posixpath to be compatible with the host OS. Args: url_or_path: A string in the form of /some/path.
github-repos
def __getattr__(self, name: str) -> column_expression_builder.ColumnExpressionBuilder: lookup = name[:-1] if name.endswith('_') and keyword.iskeyword(name[:-1]) else name expression = None if self._fields: for field in self._fields: if field.column_name == lookup: express...
Used to support building expressions directly off of the base view. See the class-level documentation for guidance on use. Args: name: the name of the FHIR field to start with in the builder. Returns: A ColumnExpressionBuilder for the field in question
github-repos
def _cumprod(l): ret = [1] for item in l: ret.append(ret[-1] * item) return ret
Cumulative product of a list. Args: l: a list of integers Returns: a list with one more element (starting with 1)
juraj-google-style
def put_many(self, type: Type[T], items: Iterable[T], context: PipelineContext = None) -> None: pass
Puts multiple objects of the same type into the data sink. Args: type: The type of the objects being inserted. items: The objects to be inserted. context: The context of the insertion (mutable).
juraj-google-style
def export_as_tfhub_module(model_name, hparams, decode_hparams, problem, checkpoint_path, export_dir): def hub_module_fn(): 'Creates the TF graph for the hub module.' model_fn = t2t_model.T2TModel.make_estimator_model_fn(model_name, hparams, decode_hparams=decode_hparams, use_tpu=FLAGS.use_tpu) ...
Exports the last checkpoint from the directory as tfhub module. It creates the Module spec and signature (based on T2T problem information), which is later used to create and export the hub module. Module will be saved inside the ckpt_dir. Args: model_name: name of the model to be exported. hparams: T2T parameters, m...
codesearchnet
def to_dict(self): return {'all_set': self._is_all_set(), 'progress': self.progress(), 'values': {property_name: (getattr(self, property_name) or []) for property_name in worker_mapping().keys()}}
This method is used in with connection to REST API. It basically converts all important properties to dictionary, which may be used by frontend. Returns: dict: ``{"all_set": bool, "progress": [int(done), int(how_many)], \ "values": {"property": [values], ..}}``
codesearchnet
def get_output(self): template_function = TEMPLATE_WRAPPER.format(function_name=self.js_function_name, template_code=self.output.getvalue()).strip() module_format = JS_MODULE_FORMATS[self.js_module_format] return module_format(self.dependencies, template_function)
Returns the generated JavaScript code. Returns: str
codesearchnet
def fix_docstring(obj: Any, old_doc_args: str, new_doc_args: str): source, line_number = inspect.getsourcelines(obj) idx = 0 while idx < len(source) and _re_args.search(source[idx]) is None: idx += 1 if idx == len(source): return indent = find_indent(source[idx]) idx += 1 sta...
Fixes the docstring of an object by replacing its arguments documentation by the one matched with the signature. Args: obj (`Any`): The object whose dostring we are fixing. old_doc_args (`str`): The current documentation of the parameters of `obj` in the docstring (as returned by `match_docstring_with_signature`). new...
github-repos
def create_summary_metadata(hparams_plugin_data_pb): if not isinstance(hparams_plugin_data_pb, plugin_data_pb2.HParamsPluginData): raise TypeError('Needed an instance of plugin_data_pb2.HParamsPluginData.' ' Got: %s' % type(hparams_plugin_data_pb)) content = plugin_data_pb2.HParamsPluginD...
Returns a summary metadata for the HParams plugin. Returns a summary_pb2.SummaryMetadata holding a copy of the given HParamsPluginData message in its plugin_data.content field. Sets the version field of the hparams_plugin_data_pb copy to PLUGIN_DATA_VERSION. Args: hparams_plugin_data_pb: the HParamsPluginData protobu...
juraj-google-style
def construct_lanczos_params(self): self.min_eigen_vec = autograph.to_graph(utils.tf_lanczos_smallest_eigval) def _m_vector_prod_fn(x): return self.get_psd_product(x, dtype=self.lanczos_dtype) def _h_vector_prod_fn(x): return self.get_h_product(x, dtype=self.lanczos_dtype) ...
Computes matrices T and V using the Lanczos algorithm. Args: k: number of iterations and dimensionality of the tridiagonal matrix Returns: eig_vec: eigen vector corresponding to min eigenvalue
juraj-google-style
def IsDevice(self): if (self._stat_object is None): self._stat_object = self._GetStat() if (self._stat_object is not None): self.entry_type = self._stat_object.type return (self.entry_type == definitions.FILE_ENTRY_TYPE_DEVICE)
Determines if the file entry is a device. Returns: bool: True if the file entry is a device.
codesearchnet
class GeneratorEnqueuer(SequenceEnqueuer): def __init__(self, generator, use_multiprocessing=False, random_seed=None): super(GeneratorEnqueuer, self).__init__(generator, use_multiprocessing) self.random_seed = random_seed def _get_executor_init(self, workers): def pool_fn(seq...
Builds a queue out of a data generator. The provided generator can be finite in which case the class will throw a `StopIteration` exception. Args: generator: a generator function which yields data use_multiprocessing: use multiprocessing if True, otherwise threading random_seed: Initial seed for workers, will be incr...
github-repos
def __init__(self, obj): if distob.engine is None: setup_engines() if isinstance(obj, Ref): self._ref = obj self.is_local = (self._ref.id.engine is distob.engine.eid) else: self._ref = Ref(obj) self.is_local = True if s...
Set up the Remote* proxy object to access an already-existing object, which may be local or remote. Args: obj (Ref or object): either a Ref reference to the (possibly remote) object to be controlled, or else an actual (local) object to be controlled.
juraj-google-style
async def update_state(self, short_name, state): if (short_name not in self.services): raise ArgumentError('Service name is unknown', short_name=short_name) if (state not in states.KNOWN_STATES): raise ArgumentError('Invalid service state', state=state) serv = self.services[short_name]['stat...
Set the current state of a service. If the state is unchanged from a previous attempt, this routine does nothing. Args: short_name (string): The short name of the service state (int): The new stae of the service
codesearchnet
def add_institute(self, institute_obj): internal_id = institute_obj['internal_id'] display_name = institute_obj['internal_id'] if self.institute(institute_id=internal_id): raise IntegrityError("Institute {0} already exists in database" ...
Add a institute to the database Args: institute_obj(Institute)
juraj-google-style
def load(self, key_filter=None, header_preproc=None): df = pd.read_csv(self.input_file, sep='\t', dtype=object) if (key_filter is not None): df = df[df[df.columns[0]].str.match(key_filter)] meta_col = df.columns[0] df[meta_col] = df[meta_col].str.split(',').str[(- 1)] for col_name in df.colu...
Load data table from tsv file, from default location Args: key_filter (str): additional filter for key column - regex matching key values to include; None for no filter header_preproc (func): function to apply to column headers to extract year numbers (as strings) Returns: pd.DataFrame: data
codesearchnet
def json_to_url(json, symbol): start = json[0]['date'] end = json[(- 1)]['date'] diff = (end - start) periods = [300, 900, 1800, 7200, 14400, 86400] diffs = {} for p in periods: diffs[p] = abs((1 - (p / (diff / len(json))))) period = min(diffs, key=diffs.get) url = 'https: re...
Converts a JSON to a URL by the Poloniex API Args: json: JSON data as a list of dict dates, where the keys are the raw market statistics. symbol: String of currency pair, like a ticker symbol. Returns: String URL to Poloniex API representing the given JSON.
codesearchnet
def validate_filename(filename, white_list_formats): return filename.lower().endswith(white_list_formats) and os.path.isfile(filename)
Check if a filename refers to a valid file. Args: filename: String, absolute path to a file white_list_formats: Set, allowed file extensions Returns: A boolean value indicating if the filename is valid or not
github-repos
def CopyToDateTimeStringISO8601(self): date_time_string = self.CopyToDateTimeString() if date_time_string: date_time_string = date_time_string.replace(' ', 'T') date_time_string = '{0:s}Z'.format(date_time_string) return date_time_string
Copies the date time value to an ISO 8601 date and time string. Returns: str: date and time value formatted as an ISO 8601 date and time string or None if the timestamp cannot be copied to a date and time string.
codesearchnet
def loadfile(method=True, writable=False, create=False): def convert_file_args(args, kwargs): filething = args[0] if args else None filename = kwargs.pop("filename", None) fileobj = kwargs.pop("fileobj", None) return filething, filename, fileobj, args[1:], kwargs def wrap(...
A decorator for functions taking a `filething` as a first argument. Passes a FileThing instance as the first argument to the wrapped function. Args: method (bool): If the wrapped functions is a method writable (bool): If a filename is passed opens the file readwrite, if passed a file object verifies that it is writab...
juraj-google-style
def _ParseKeywordArgs(args, fn_spec): kwargs = {} remaining_kwargs = [] remaining_args = [] fn_keywords = fn_spec.varkw fn_args = fn_spec.args + fn_spec.kwonlyargs if not args: return (kwargs, remaining_kwargs, remaining_args) skip_argument = False for index, argument in enumerat...
Parses the supplied arguments for keyword arguments. Given a list of arguments, finds occurrences of --name value, and uses 'name' as the keyword and 'value' as the value. Constructs and returns a dictionary of these keyword arguments, and returns a list of the remaining arguments. Only if fn_keywords is None, this o...
github-repos
def get_instance(self): return Instance(self.rest_client.make_request(self.instance), self.rest_client)
Get the Streams instance that owns this view. Returns: Instance: Streams instance owning this view.
codesearchnet
def get_adif_id(self, callsign, timestamp=timestamp_now): return self.get_all(callsign, timestamp)[const.ADIF]
Returns ADIF id of a callsign's country Args: callsign (str): Amateur Radio callsign timestamp (datetime, optional): datetime in UTC (tzinfo=pytz.UTC) Returns: int: containing the country ADIF id Raises: KeyError: No Country found for callsign
juraj-google-style
def check_output(self, want, got, optionflags): if got and (not want): return True if want is None: want = '' if want == got: return True want = self._ADDRESS_RE.sub('at ...>', want) want, want_changed = self._tf_tensor_numpy_output(want) if want_changed: got, _ =...
Compares the docstring output to the output gotten by running the code. Python addresses in the output are replaced with wildcards. Float values in the output compared as using `np.allclose`: * Float values are extracted from the text and replaced with wildcards. * The wildcard text is compared to the actual output....
github-repos
def suggest(self, query): res, suggest = self.search(query, results=1, suggestion=True) try: title = suggest or res[0] except IndexError: title = None return title
Gather suggestions based on the provided title or None if no suggestions found Args: query (str): Page title Returns: String or None: Suggested page title or **None** if no \ suggestion found
juraj-google-style
def _QueryProcessStatus(self, process): process_is_alive = process.is_alive() if process_is_alive: rpc_client = self._rpc_clients_per_pid.get(process.pid, None) process_status = rpc_client.CallFunction() else: process_status = None return process_status
Queries a process to determine its status. Args: process (MultiProcessBaseProcess): process to query for its status. Returns: dict[str, str]: status values received from the worker process.
juraj-google-style
def get_end_start_epochs(year, month, day, direction, unit, count): if (year or month or day): if (not year): year = 2017 if (not month): month = 1 if (not day): day = 1 initial_delorean = date_to_delorean(year, month, day) else: count ...
Gets epoch from a start date and epoch from a shifted date Args: year: Int between 1 and 9999. month: Int between 1 and 12. day: Int between 1 and 31. direction: String to shift time forwards or backwards. Valid values: 'last', 'next'. unit: String of time period unit for count argument. How far back to check historic...
codesearchnet
def _MakeServiceDescriptor(self, service_proto, service_index, scope, package, file_desc): if package: service_name = '.'.join((package, service_proto.name)) else: service_name = service_proto.name methods = [self._MakeMethodDescriptor(method_proto, service_name, package, scope, index) for (...
Make a protobuf ServiceDescriptor given a ServiceDescriptorProto. Args: service_proto: The descriptor_pb2.ServiceDescriptorProto protobuf message. service_index: The index of the service in the File. scope: Dict mapping short and full symbols to message and enum types. package: Optional package name for the new messag...
codesearchnet
def _GetContainerTypes(self): self._cursor.execute(self._TABLE_NAMES_QUERY) table_names = [row[0] for row in self._cursor.fetchall()] return [table_name for table_name in self._CONTAINER_TYPES if (table_name in table_names)]
Retrieves the container types to merge. Container types not defined in _CONTAINER_TYPES are ignored and not merged. Specific container types reference other container types, such as event referencing event data. The names are ordered to ensure the attribute containers are merged in the correct order. Returns: list[s...
codesearchnet
def squeeze_batch_dims(inp, op, inner_rank): with ops.name_scope_v2('squeeze_batch_dims'): shape = inp.shape inner_shape = shape[-inner_rank:] if not inner_shape.is_fully_defined(): inner_shape = array_ops.shape(inp)[-inner_rank:] batch_shape = shape[:-inner_rank] ...
Returns `unsqueeze_batch(op(squeeze_batch(inp)))`. Where `squeeze_batch` reshapes `inp` to shape `[prod(inp.shape[:-inner_rank])] + inp.shape[-inner_rank:]` and `unsqueeze_batch` does the reverse reshape but on the output. Args: inp: A tensor with dims `batch_shape + inner_shape` where `inner_shape` is length `inner_...
github-repos
def _set_initial_contents(self, contents): contents = self._encode_contents(contents) changed = self._byte_contents != contents st_size = len(contents) if self._byte_contents: self.size = 0 current_size = self.st_size or 0 self.filesystem.change_disk...
Sets the file contents and size. Called internally after initial file creation. Args: contents: string, new content of file. Returns: True if the contents have been changed. Raises: IOError: if the st_size is not a non-negative integer, or if st_size exceeds the available file system space
juraj-google-style
def attach(self, droplet_id, region): return self.get_data(('volumes/%s/actions/' % self.id), type=POST, params={'type': 'attach', 'droplet_id': droplet_id, 'region': region})
Attach a Volume to a Droplet. Args: droplet_id: int - droplet id region: string - slug identifier for the region
codesearchnet
def read(file_path): actual_file_path = os.path.expanduser(file_path) with open(actual_file_path, 'r') as f: lines = f.readlines() gmt = [] for (line_num, line) in enumerate(lines): fields = line.split('\t') assert (len(fields) > 2), ('Each line must have at least 3 tab-delimited...
Read a gmt file at the path specified by file_path. Args: file_path (string): path to gmt file Returns: gmt (GMT object): list of dicts, where each dict corresponds to one line of the GMT file
codesearchnet
def __init__(self, estimator, logdir=None): threading.Thread.__init__(self) self.event = threading.Event() self.estimator = estimator self.logdir = logdir or tempfile.mkdtemp()
Initialize ``Tensorboard`` instance. Args: estimator (sagemaker.estimator.Framework): A SageMaker ``Estimator``. logdir (str): Directory for logs (default: None). If not specified, a temporary directory is made.
juraj-google-style
def dp020(self, value=None): if value is not None: try: value = float(value) except ValueError: raise ValueError('value {} need to be of type float ' 'for field `dp020`'.format(value)) self._dp020 = value
Corresponds to IDD Field `dp020` Dew-point temperature corresponding to 2.0% annual cumulative frequency of occurrence Args: value (float): value for IDD Field `dp020` Unit: C if `value` is None it will not be checked against the specification and is assumed to be a missing value Raises: ValueError: if `value` is not...
juraj-google-style
def array(self, dimensions=None): if (dimensions is None): dims = [d for d in (self.kdims + self.vdims)] else: dims = [self.get_dimension(d, strict=True) for d in dimensions] (columns, types) = ([], []) for dim in dims: column = self.dimension_values(dim) columns.append(c...
Convert dimension values to columnar array. Args: dimensions: List of dimensions to return Returns: Array of columns corresponding to each dimension
codesearchnet
def _find_cellid(self, code): from difflib import SequenceMatcher maxvalue = 0. maxid = None for cellid, c in self.cellids.items(): matcher = SequenceMatcher(a=c, b=code) ratio = matcher.quick_ratio() if ratio > maxvalue and ratio > 0...
Determines the most similar cell (if any) to the specified code. It must have at least 50% overlap ratio and have been a loop-intercepted cell previously. Args: code (str): contents of the code cell that were executed.
juraj-google-style
def add_input(self, *args, **kwargs): return self._inputs.add(*args, **kwargs)
Add a wrapped input argument to the hint. Args: *args: The input tensor. **kwargs: "name" label "tag" a tag to group multiple arguments that will be aggregated. I.e. a string like 'cool_input'. Basically multiple inputs can be added to the same hint for parallel operations that will eventually be combined. An example ...
github-repos
def fullpath(self): return str(os.path.join(self.path, self.directory))
Full path to the Mackup configuration files. The full path to the directory when Mackup is storing the configuration files. Returns: str
codesearchnet
def absolute_url(self): if self.is_root(): return utils.concat_urls(self.url) return utils.concat_urls(self.parent.absolute_url, self.url)
Get the absolute url of ``self``. Returns: str: the absolute url.
codesearchnet
def extract_github_repo_owner_and_name(url): _check_github_url_is_supported(url) parts = get_parts_of_url_path(url) repo_owner = parts[0] repo_name = parts[1] return repo_owner, _strip_trailing_dot_git(repo_name)
Given an URL, return the repo name and who owns it. Args: url (str): The URL to the GitHub repository Raises: ValueError: on url that aren't from github Returns: str, str: the owner of the repository, the repository name
juraj-google-style
def restore_collection(backup): for k, v in six.iteritems(backup): del tf.get_collection_ref(k)[:] tf.get_collection_ref(k).extend(v)
Restore from a collection backup. Args: backup (dict):
juraj-google-style
def fragment_search(self, fragement:str) -> List[dict]: fragement = self.extract_fragment(fragement) ilx_rows = self.fragment2rows.get(fragement) if not ilx_rows: return None else: return ilx_rows
Returns the rows in InterLex associated with the fragment Note: Pressumed to have duplicate fragements in InterLex Args: fragment: The fragment_id of the curie pertaining to the ontology Returns: None or List[dict]
juraj-google-style
def predict_proba(self, x, y=None, **kwargs): if (self.clf is None): raise ValueError('Model has to be trained before making predictions.') if (x is pandas.Series): input_ = self.featurize_row(x.iloc[0], x.iloc[1]).reshape((1, (- 1))) elif (x is pandas.DataFrame): input_ = np.array([...
Predict the causal score using a trained RCC model Args: x (numpy.array or pandas.DataFrame or pandas.Series): First variable or dataset. args (numpy.array): second variable (optional depending on the 1st argument). Returns: float: Causation score (Value : 1 if a->b and -1 if b->a)
codesearchnet
def round_f1(y_true, y_predicted): try: predictions = [np.round(x) for x in y_predicted] except TypeError: predictions = y_predicted return f1_score(y_true, predictions)
Calculates F1 (binary) measure. Args: y_true: list of true values y_predicted: list of predicted values Returns: F1 score
juraj-google-style
def StaticAdd(cls, queue_urn, rdf_value, mutation_pool=None): if (not isinstance(rdf_value, cls.rdf_type)): raise ValueError(('This collection only accepts values of type %s.' % cls.rdf_type.__name__)) if (mutation_pool is None): raise ValueError("Mutation pool can't be none.") timestamp = r...
Adds an rdf value the queue. Adds an rdf value to a queue. Does not require that the queue be locked, or even open. NOTE: The caller is responsible for ensuring that the queue exists and is of the correct type. Args: queue_urn: The urn of the queue to add to. rdf_value: The rdf value to add to the queue. mutation_p...
codesearchnet
def _VerifyValues(self, image, ksizes, strides, rates, padding, patches): ksizes = [1] + ksizes + [1] strides = [1] + strides + [1] rates = [1] + rates + [1] for dtype in [np.float16, np.float32, np.float64, dtypes.bfloat16.as_numpy_dtype]: out_tensor = array_ops.extract_image_patches(constant_o...
Tests input-output pairs for the ExtractImagePatches op. Args: image: Input tensor with shape: [batch, in_rows, in_cols, depth]. ksizes: Patch size specified as: [ksize_rows, ksize_cols]. strides: Output strides, specified as [stride_rows, stride_cols]. rates: Atrous rates, specified as [rate_rows, rate_cols]. padding...
github-repos
def assert_rank(x, rank, data=None, summarize=None, message=None, name=None): with ops.name_scope(name, 'assert_rank', (x, rank) + tuple(data or [])): if not isinstance(x, sparse_tensor.SparseTensor): x = ops.convert_to_tensor(x, name='x') rank = ops.convert_to_tensor(rank, name='rank') ...
Assert `x` has rank equal to `rank`. Example of adding a dependency to an operation: ```python with tf.control_dependencies([tf.compat.v1.assert_rank(x, 2)]): output = tf.reduce_sum(x) ``` Args: x: Numeric `Tensor`. rank: Scalar integer `Tensor`. data: The tensors to print out if the condition is False. Defaults...
github-repos
def anti_join(df, other, **kwargs): (left_on, right_on, suffixes) = get_join_parameters(kwargs) if (not right_on): right_on = [col_name for col_name in df.columns.values.tolist() if (col_name in other.columns.values.tolist())] left_on = right_on elif (not isinstance(right_on, (list, tuple)))...
Returns all of the rows in the left DataFrame that do not have a match in the right DataFrame. Args: df (pandas.DataFrame): Left DataFrame (passed in via pipe) other (pandas.DataFrame): Right DataFrame Kwargs: by (str or list): Columns to join on. If a single string, will join on that column. If a list of lists which...
codesearchnet
def get_config(filepath=None, default_loader=None, on_missing=None): cache_key = (filepath, default_loader, on_missing) if (CACHE.get(cache_key) is not None): return CACHE.get(cache_key) logger = logging.getLogger('birding') if (filepath is None): filepath = BIRDING_CONF if (default_...
Get a dict for the current birding configuration. The resulting dictionary is fully populated with defaults, such that all valid keys will resolve to valid values. Invalid and extra values in the configuration result in an exception. See :ref:`config` (module-level docstring) for discussion on how birding configurati...
codesearchnet
def cancelRealTimeBars(self, bars: RealTimeBarList): self.client.cancelRealTimeBars(bars.reqId) self.wrapper.endSubscription(bars)
Cancel the realtime bars subscription. Args: bars: The bar list that was obtained from ``reqRealTimeBars``.
juraj-google-style
def getConfigPath(configFileName=None): paths = {} applicationPath = './' if (sys.platform == 'win32'): applicationPath = os.path.expanduser(os.path.join('~\\', 'OSRFramework')) else: applicationPath = os.path.expanduser(os.path.join('~/', '.config', 'OSRFramework')) paths = {'appPat...
Auxiliar function to get the configuration paths depending on the system Args: ----- configFileName: TODO. Returns: -------- A dictionary with the following keys: appPath, appPathDefaults, appPathTransforms, appPathPlugins, appPathPatterns, appPathPatterns.
codesearchnet
def summarize(self, geom, stat=None): if not hasattr(geom, 'num_coords'): raise TypeError('Need OGR or GEOS geometry, %s found' % type(geom)) clone = self._clone() for obj in clone: arr = obj.array(geom) if arr is not None: if stat: ...
Returns a new RasterQuerySet with subsetted/summarized ndarrays. Arguments: geom -- geometry for masking or spatial subsetting Keyword args: stat -- any numpy summary stat method as str (min/max/mean/etc)
juraj-google-style
def save_with_exif_info(img, *args, **kwargs): if ('exif' in kwargs): exif = kwargs.pop('exif') else: exif = img.info.get('exif') img.save(*args, exif=exif, **kwargs)
Saves an image using PIL, preserving the exif information. Args: img (PIL.Image.Image): *args: The arguments for the `save` method of the Image class. **kwargs: The keywords for the `save` method of the Image class.
codesearchnet
def Shell(self, command, timeout_ms=None): return self.protocol_handler.Command( self._handle, service=b'shell', command=command, timeout_ms=timeout_ms)
Run command on the device, returning the output. Args: command: Shell command to run timeout_ms: Maximum time to allow the command to run.
juraj-google-style
def _write_reqs(amend: bool=False, stage: bool=False): LOGGER.info('writing requirements') base_cmd = 'pipenv lock -r' _write_reqs_file(f'{base_cmd}', 'requirements.txt') _write_reqs_file(f'{base_cmd} -d', 'requirements-dev.txt') files_to_add = ['Pipfile', 'requirements.txt', 'requirements-dev.txt']...
Writes the requirement files Args: amend: amend last commit with changes stage: stage changes
codesearchnet
def _HashRow(cls, row): values = [] for value in row: try: value = '{0!s}'.format(value) except UnicodeDecodeError: value = repr(value) values.append(value) return hash(' '.join(values))
Hashes the given row. Args: row (sqlite3.Row): row. Returns: int: hash value of the given row.
juraj-google-style
def apply(self, var, props, reverse=False): vs, vid = sort_vid_split(var) if reverse: tms = [] else: tms = [(a, op, b) for a, op, b in self._typemap if op in _LR_OPS] for src, op, tgt in tms: if _valmatch([vs], src, o...
Apply the VPM to variable *var* and properties *props*. Args: var: a variable props: a dictionary mapping properties to values reverse: if `True`, apply the rules in reverse (e.g. from grammar-external to grammar-internal forms) Returns: a tuple (v, p) of the mapped variable and properties
juraj-google-style
def _IsIdentifier(cls, string): return (string and (not string[0].isdigit()) and all(((character.isalnum() or (character == '_')) for character in string)))
Checks if a string contains an identifier. Args: string (str): string to check. Returns: bool: True if the string contains an identifier, False otherwise.
codesearchnet
def flatten(repertoire, big_endian=False): if repertoire is None: return None order = 'C' if big_endian else 'F' return repertoire.squeeze().ravel(order=order)
Flatten a repertoire, removing empty dimensions. By default, the flattened repertoire is returned in little-endian order. Args: repertoire (np.ndarray or None): A repertoire. Keyword Args: big_endian (boolean): If ``True``, flatten the repertoire in big-endian order. Returns: np.ndarray: The flattened repertoire.
juraj-google-style
def _faster_to_representation(self, instance): ret = {} fields = self._readable_fields is_fast = isinstance(instance, prefetch.FastObject) id_fields = self._readable_id_fields for field in fields: attribute = None if ...
Modified to_representation with optimizations. 1) Returns a plain old dict as opposed to OrderedDict. (Constructing ordered dict is ~100x slower than `{}`.) 2) Ensure we use a cached list of fields (this optimization exists in DRF 3.2 but not 3.1) Arguments: instance: a model instance or data object Returns: Dict of ...
juraj-google-style
def _CreateIndexIfNotExists(self, index_name, mappings): try: if not self._client.indices.exists(index_name): self._client.indices.create( body={'mappings': mappings}, index=index_name) except elasticsearch.exceptions.ConnectionError as exception: raise RuntimeError( ...
Creates an Elasticsearch index if it does not exist. Args: index_name (str): mame of the index. mappings (dict[str, object]): mappings of the index. Raises: RuntimeError: if the Elasticsearch index cannot be created.
juraj-google-style
def make_flat_list_of_images(images: Union[list[ImageInput], ImageInput]) -> ImageInput: if isinstance(images, (list, tuple)) and all((isinstance(images_i, (list, tuple)) for images_i in images)) and all((is_valid_list_of_images(images_i) for images_i in images)): return [img for img_list in images for img ...
Ensure that the output is a flat list of images. If the input is a single image, it is converted to a list of length 1. If the input is a nested list of images, it is converted to a flat list of images. Args: images (`Union[List[ImageInput], ImageInput]`): The input image. Returns: list: A list of images or a 4d array ...
github-repos
def run(self, gin): with ScratchDir('.'): p = subprocess.Popen(self._gulp_cmd, stdout=subprocess.PIPE, stdin=subprocess.PIPE, stderr=subprocess.PIPE) (out, err) = p.communicate(bytearray(gin, 'utf-8')) out = out.decode('utf-8') err = err.decode('utf-8') if (('Error' in err) o...
Run GULP using the gin as input Args: gin: GULP input string Returns: gout: GULP output string
codesearchnet
def freeze(self, permanent_value: Any=utils.MISSING_VALUE, apply_before_use: bool=True) -> 'ValueSpec':
Sets the default value using a permanent value and freezes current spec. A frozen value spec will not accept any value that is not the default value. A frozen value spec is useful when a subclass fixes the value of a symoblic attribute and want to prevent it from being modified. Args: permanent_value: A permanent val...
github-repos
def _fork_children_processes(name, successors): logging.info('Process "%s" started, PID: %d!', name, os.getpid()) children_process = [multiprocessing.Process(target=_fork_children_processes, args=args) for args in successors] for child_process in children_process: child_process.start() if 'child...
Forks children processes and its descendants recursively. Args: name: The name of this process. successors: The args for the descendant processes.
github-repos
def _check_error(self, response, json_response=None): if (response.status_code >= 400): json_response = (json_response or self._get_json_response(response)) err_cls = self._check_http_error_code(response.status_code) try: raise err_cls(('%s error: %s' % (response.status_code, jso...
Check for HTTP error code from the response, raise exception if there's any Args: response (object): Object returned by requests' `get` and `post` methods json_response (dict): JSON response, if applicable Raises: HTTPError: If the status code of response is either 4xx or 5xx Returns: True if status code is not err...
codesearchnet
def resolve_one_of(tags, at_least_one): if (len(tags) < len(at_least_one)): return None for possible_resolution in choose_1_from_each(at_least_one): resolution = {} pr = possible_resolution[:] for entity_type in pr: last_end_index = (- 1) if (entity_type i...
This searches tags for Entites in at_least_one and returns any match Args: tags(list): List of tags with Entities to search for Entities at_least_one(list): List of Entities to find in tags Returns: object: returns None if no match is found but returns any match as an object
codesearchnet
def _shape_invariant_to_type_spec(var, shape=None): var = _convert_tensorarray_to_flow(var) if shape is None: return type_spec.type_spec_from_value(var) elif isinstance(shape, type_spec.TypeSpec): if not shape.is_compatible_with(var): raise TypeError('TypeSpec %r is not compatibl...
Converts a shape invariant to a TypeSpec. If `var` is a TensorArray, it will first be converted to its flow. Args: var: The tensor, tensor array or composite tensor whose shape is described by the shape invariant. shape: A `TypeSpec` or `TensorShape`. If `shape` is already a `TypeSpec`, then it is simply returned as...
github-repos
def _collect_feature_info(self, candidate_feature_diffs): project_root = self.project.path for diff in candidate_feature_diffs: path = diff.b_path modname = relpath_to_modname(path) modpath = project_root.joinpath(path) importer = partial(import_module_at_path, modname, modpath) ...
Collect feature info Args: candidate_feature_diffs (List[git.diff.Diff]): list of Diffs corresponding to admissible file changes compared to comparison ref Returns: List[Tuple]: list of tuple of importer, module name, and module path. The "importer" is a callable that returns a module
codesearchnet
def query_blockchain_events( web3: Web3, contract_manager: ContractManager, contract_address: Address, contract_name: str, topics: List, from_block: BlockNumber, to_block: BlockNumber, ) -> List[Dict]: filter_params = { 'fromBlock': from_block, ...
Returns events emmitted by a contract for a given event name, within a certain range. Args: web3: A Web3 instance contract_manager: A contract manager contract_address: The address of the contract to be filtered, can be `None` contract_name: The name of the contract topics: The topics to filter for from_block: The blo...
juraj-google-style