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def to_affine(self): (X, Y, Z) = (self.x, self.y, self.inverse(self.z)) return (((X * (Z ** 2)) % P), ((Y * (Z ** 3)) % P))
Converts this point to an affine representation. Returns: AffinePoint: The affine reprsentation.
codesearchnet
def interpolate_radius(r1, r2, fraction): def f(a, b, c): ' Returns the length of the interpolated radius calculated\n using similar triangles.\n ' return (a + (c * (b - a))) return (f(r2, r1, (1.0 - fraction)) if (r1 > r2) else f(r1, r2, fraction))
Calculate the radius that corresponds to a point P that lies at a fraction of the length of a cut cone P1P2 where P1, P2 are the centers of the circles that bound the shape with radii r1 and r2 respectively. Args: r1: float Radius of the first node of the segment. r2: float Radius of the second node of the segment fra...
codesearchnet
def jaccard(self, other): if other.seed != self.seed: raise ValueError("Cannot compute Jaccard given MinHash with\ different seeds") if len(self) != len(other): raise ValueError("Cannot compute Jaccard given MinHash with\ different...
Estimate the `Jaccard similarity`_ (resemblance) between the sets represented by this MinHash and the other. Args: other (datasketch.MinHash): The other MinHash. Returns: float: The Jaccard similarity, which is between 0.0 and 1.0.
juraj-google-style
def load_map_coordinates(map_file): if map_file[-4:] == ".pkl": map_data = pickle.load(open(map_file)) lon = map_data['lon'] lat = map_data['lat'] else: map_data = Dataset(map_file) if "lon" in map_data.variables.keys(): lon = map_data.variables['lon'][:]...
Loads map coordinates from netCDF or pickle file created by util.makeMapGrids. Args: map_file: Filename for the file containing coordinate information. Returns: Latitude and longitude grids as numpy arrays.
juraj-google-style
def create_worker(self, func, interval, *args, **kwargs): thread = StoppableWorkerThread(func, interval, args, kwargs) self._workers.append(thread) if self._started: thread.start()
Spawn a worker thread running func. The worker will be automatically be started when start() is called and terminated when stop() is called on this object. This must be called only from the main thread, not from a worker thread. create_worker must not be called after stop() has been called. If it is called before st...
codesearchnet
def _all_correct_list(array): if (type(array) not in _ITERABLE_TYPES): return False for item in array: if (not (type(item) in _ITERABLE_TYPES)): return False if (len(item) != 2): return False return True
Make sure, that all items in `array` has good type and size. Args: array (list): Array of python types. Returns: True/False
codesearchnet
def write_file(self, filename, distance=6, velocity=8, charge=3): with open(filename, 'w') as f: f.write(self.get_string(distance=distance, velocity=velocity, charge=charge))
Writes LammpsData to file. Args: filename (str): Filename. distance (int): No. of significant figures to output for box settings (bounds and tilt) and atomic coordinates. Default to 6. velocity (int): No. of significant figures to output for velocities. Default to 8. charge (int): No. of significant figures to output ...
codesearchnet
def _gather_field_values(item, *, fields=None, field_map=FIELD_MAP, normalize_values=False, normalize_func=normalize_value): it = get_item_tags(item) if (fields is None): fields = list(it.keys()) normalize = (normalize_func if normalize_values else (lambda x: str(x))) field_values = [] for f...
Create a tuple of normalized metadata field values. Parameter: item (~collections.abc.Mapping, str, os.PathLike): Item dict or filepath. fields (list): A list of fields used to compare item dicts. field_map (~collections.abc.Mapping): A mapping field name aliases. Default: :data:`~google_music_utils.constants.FIELD_MA...
codesearchnet
def extract_variable_info(kwargs: Any) -> Tuple[str, Tuple[int, ...], dtypes.DType, Callable[[], Any], Optional[int]]: def get_restore_uid(initial_value: Callable[..., Any]) -> int | None: return getattr(initial_value, 'restore_uid', None) if isinstance(kwargs['initial_value'], functools.partial) and (...
Extracts the variable creation attributes from the kwargs. Args: kwargs: a dict of keyword arguments that were passed to a variable creator scope. Returns: A tuple of variable name, shape, dtype, initialization function, restore_uid.
github-repos
def pan_and_scan_batched(self, images: 'torch.Tensor', pan_and_scan_min_crop_size: int, pan_and_scan_max_num_crops: int, pan_and_scan_min_ratio_to_activate: float): height, width = images.shape[-2:] if width >= height: if width / height < pan_and_scan_min_ratio_to_activate: return [] ...
Pan and Scan an image, by cropping into smaller images when the aspect ratio exceeds minimum allowed ratio. Args: image (`torch.Tensor`): Image to resize. pan_and_scan_min_crop_size (`int`, *optional*): Minimum size of each crop in pan and scan. pan_and_scan_max_num_crops (`int`, *optional*): Maximum number of crops p...
github-repos
def encode_tf(self, s): ids = subword_text_encoder_ops.subword_text_encoder_encode( s, self._filepath) return ids[:-1]
Encode a tf.Scalar string to a tf.Tensor. This will be necessary for on-the-fly tokenization. Args: s: a tf.Scalar with dtype tf.string Returns: a 1d tf.Tensor with dtype tf.int32
juraj-google-style
def GetUnscannedSubNode(self): if ((not self.sub_nodes) and (not self.scanned)): return self for sub_node in self.sub_nodes: result = sub_node.GetUnscannedSubNode() if result: return result return None
Retrieves the first unscanned sub node. Returns: SourceScanNode: sub scan node or None if not available.
codesearchnet
def _read_at(self, d, interpolation='linear', index=False, return_basis=False): method = {'linear': utils.linear, 'none': None} i, d = utils.find_previous(self.basis, d, ...
Private function. Implements read_at() for a single depth. Args: d (float) interpolation (str) index(bool) return_basis (bool) Returns: float
juraj-google-style
def __copy_extracted(self, path, destination): unpacked_dir = (self.filename + '.unpacked') if (not os.path.isdir(unpacked_dir)): LOGGER.warn('Failed to copy extracted file %s, no extracted dir', path) return source_path = os.path.join(unpacked_dir, path) if (not os.path.exists(source_pa...
Copies a file that was already extracted to the destination directory. Args: path (str): Relative (to the root of the archive) of the file to copy. destination (str): Directory to extract the archive to.
codesearchnet
def not_function(function: _evaluation.NotFunction, operand_result: Optional[_sql_data_types.Select], params_result: Collection[_sql_data_types.StandardSqlExpression]) -> _sql_data_types.Select: del function, params_result if operand_result is None: raise ValueError('not() cannot be called without an op...
Generates Spark SQL representing the FHIRPath not() function. Returns `TRUE` if the input collection evaluates to `FALSE`. The operand is expected to be a table subquery of cardinality 1, whose value is a `BOOL` type. By default, `_NotFunction` will return `FALSE` if given no operator. Args: function: The FHIRPath A...
github-repos
def umount(self, forced=True): if self.is_mounted(): if is_osx(): cmd = ["/usr/sbin/diskutil", "unmount", self.connection["mount_point"]] if forced: cmd.insert(2, "force") subprocess.check_call(cmd) ...
Try to unmount our mount point. Defaults to using forced method. If OS is Linux, it will not delete the mount point. Args: forced: Bool whether to force the unmount. Default is True.
juraj-google-style
def __fa_process_container(self, container, find, start, end, avoid, initial_state, execution_state, trace_current, trace_final): ip = start while ip: try: instr = container.fetch(ip) except ReilContainerInvalidAddressError: logger.debug('Exception @ {: raise ...
Process a REIL container. Args: avoid (list): List of addresses to avoid while executing the code. container (ReilContainer): REIL container to execute. end (int): End address. execution_state (Queue): Queue of execution states. find (int): Address to find. initial_state (State): Initial state. start (int): Start addr...
codesearchnet
def get_staking_cutoff(self, round_num=0, tournament=1): query = arguments = {'number': round_num, 'tournament': tournament} result = self.raw_query(query, arguments) result = result['data']['rounds'][0]['selection'] key = 'bCutoff' if round_num >= 154 or round_num == 0...
Compute staking cutoff for the given round and tournament. Args: round_num (int, optional): The round you are interested in, defaults to current round. tournament (int, optional): ID of the tournament, defaults to 1 Returns: decimal.Decimal: cutoff probability Raises: ValueError: in case of missing prize pool inform...
juraj-google-style
def __eq__(self, other) -> bool: if self.timeslots == other.timeslots: return True return False
Two time-slot collections are the same if they have the same time-slots. Args: other (TimeslotCollection): other TimeslotCollection
juraj-google-style
def CheckApproversForLabel(self, token, client_urn, requester, approvers, label): auth = self.reader.GetAuthorizationForSubject(label) if (not auth): return True if auth.requester_must_be_authorized: if (not self.CheckPermissions(requester, label)): raise access_control.Unauthori...
Checks if requester and approvers have approval privileges for labels. Checks against list of approvers for each label defined in approvers.yaml to determine if the list of approvers is sufficient. Args: token: user token client_urn: ClientURN object of the client requester: username string of person requesting appro...
codesearchnet
def get_domain_template(distro, libvirt_ver, **kwargs): env = Environment(loader=PackageLoader('lago', 'providers/libvirt/templates'), trim_blocks=True, lstrip_blocks=True) template_name = 'dom_template-{0}.xml.j2'.format(distro) try: template = env.get_template(template_name) except TemplateNot...
Get a rendered Jinja2 domain template Args: distro(str): domain distro libvirt_ver(int): libvirt version kwargs(dict): args for template render Returns: str: rendered template
codesearchnet
def _export_mode(mode, has_saved_vars, builder, model, custom_objects, checkpoint_path, input_signature): compile_clone = mode != mode_keys.ModeKeys.PREDICT if compile_clone and (not model.optimizer): raise ValueError('Model does not have an optimizer. Cannot export mode %s' % mode) model_graph = op...
Exports a model, and optionally saves new vars from the clone model. Args: mode: A `KerasModeKeys` string. has_saved_vars: A `boolean` indicating whether the SavedModel has already exported variables. builder: A `SavedModelBuilder` object. model: A `tf.keras.Model` object. custom_objects: A dictionary mapping string n...
github-repos
def circuit_to_latex_using_qcircuit( circuit: circuits.Circuit, qubit_order: ops.QubitOrderOrList = ops.QubitOrder.DEFAULT) -> str: diagram = circuit.to_text_diagram_drawer( qubit_namer=qcircuit_qubit_namer, qubit_order=qubit_order, get_circuit_diagram_info=get_qcircuit_...
Returns a QCircuit-based latex diagram of the given circuit. Args: circuit: The circuit to represent in latex. qubit_order: Determines the order of qubit wires in the diagram. Returns: Latex code for the diagram.
juraj-google-style
def _bash_comp_command(self, cmd, add_help=True): out = ['-h', '--help'] if add_help else [] cmd_dict = self._opt_cmds[cmd] if cmd else self._opt_bare for opt, sct in cmd_dict: out.extend(_names(self._conf[sct], opt)) return out
Build a list of all options for a given command. Args: cmd (str): command name, set to None or '' for bare command. add_help (bool): add an help option. Returns: list of str: list of CLI options strings.
juraj-google-style
def downloadMARCXML(doc_id, library, base="nkc"): downer = Downloader() data = downer.download( ALEPH_URL + Template(DOC_URL_TEMPLATE).substitute( DOC_ID=doc_id, LIBRARY=library ) ) dom = dhtmlparser.parseString(data) error = dom.find("login"...
Download MARC XML document with given `doc_id` from given `library`. Args: doc_id (DocumentID): You will get this from :func:`getDocumentIDs`. library (str): "``NKC01``" in our case, but don't worry, :func:`getDocumentIDs` adds library specification into :class:`DocumentID` named tuple. Returns: str: MARC XML unicode...
juraj-google-style
def __call__(self, inputs: List[Any], global_state: Optional[pg.geno.AttributeDict]=None, step: int=0) -> List[Any]: if self.input_element_type is not None: elem_type = self.input_element_type for i, elem in enumerate(inputs): if not isinstance(elem, elem_type): raise Typ...
Transform a list of input values to a list of output values. Args: inputs: A list of values as inputs. global_state: An `AttributeDict` object (dictionary that provides attribute access) as the global state container, which is readable/writable during the operation. step: Number of examples historically proposed, whic...
github-repos
def _send_message(self, method, endpoint, params=None, data=None): url = self.url + endpoint r = self.session.request(method, url, params=params, data=data, auth=self.auth, timeout=30) return r.json()
Send API request. Args: method (str): HTTP method (get, post, delete, etc.) endpoint (str): Endpoint (to be added to base URL) params (Optional[dict]): HTTP request parameters data (Optional[str]): JSON-encoded string payload for POST Returns: dict/list: JSON response
juraj-google-style
def _process_returns_section(func_documentation, sig, config_class, indent_level): return_docstring = '' if func_documentation is not None and (match_start := re.search('(?m)^([ \\t]*)(?=Return)', func_documentation)) is not None: match_end = re.search('(?m)^([ \\t]*)(?=Example)', func_documentation) ...
Process the returns section of the docstring. Args: func_documentation (`str`): Existing function documentation (manually specified in the docstring) sig (`inspect.Signature`): Function signature config_class (`str`): Config class for the model indent_level (`int`): Indentation level
github-repos
def _trace_variant_creation(self): variant = self._variant_tensor if not isinstance(variant, ops.EagerTensor): raise NotImplementedError('Constructing a tf.function that reproduces a given dataset is only supported for datasets created eagerly. Please file a feature request if this is important to you.'...
Traces a function which outputs a variant `tf.Tensor` for this dataset. Note that creating this function involves evaluating an op, and is currently only supported when executing eagerly. Returns: A zero-argument `ConcreteFunction` which outputs a variant `tf.Tensor`.
github-repos
def cmd_path(self, cmd): for binscript in self.bin.files: if binscript.path.endswith('/{0}'.format(cmd)): return binscript.path raise ValueError('The command {0} was not found.'.format(cmd))
Get the path of a command in the virtual if it exists. Args: cmd (str): The command to look for. Returns: str: The full path to the command. Raises: ValueError: If the command is not present.
juraj-google-style
def reminders_add(self, *, text: str, time: str, **kwargs) -> SlackResponse: self._validate_xoxp_token() kwargs.update({'text': text, 'time': time}) return self.api_call('reminders.add', json=kwargs)
Creates a reminder. Args: text (str): The content of the reminder. e.g. 'eat a banana' time (str): When this reminder should happen: the Unix timestamp (up to five years from now e.g. '1602288000'), the number of seconds until the reminder (if within 24 hours), or a natural language description (Ex. 'in 15 minutes' or...
codesearchnet
def parse_hunks(diff: str) -> list[Hunk]: diff_pattern = 'diff --git a/.* b/(.*)\\n(?:\\w+ file mode \\d+\\n)?index .*\\n--- .*\\n\\+\\+\\+ .*\\n' hunk_header_pattern = '@@ -\\d+,\\d+ \\+(\\d+),(\\d+) @@.*\\n' raw_per_file_hunks = re.split(diff_pattern, diff)[1:] parsed_hunks = [] for file, raw_hunk...
Parses a diff into hunks. Arguments: diff: The raw output of git diff. Returns: A list of Hunks.
github-repos
def has_all_nonzero_neurite_radii(neuron, threshold=0.0): bad_ids = [] seen_ids = set() for s in _nf.iter_sections(neuron): for i, p in enumerate(s.points): info = (s.id, i) if p[COLS.R] <= threshold and info not in seen_ids: seen_ids.add(info) ...
Check presence of neurite points with radius not above threshold Arguments: neuron(Neuron): The neuron object to test threshold: value above which a radius is considered to be non-zero Returns: CheckResult with result including list of (section ID, point ID) pairs of zero-radius points
juraj-google-style
def _solve(self, sense=None): while (len(self._remove_constr) > 0): self._remove_constr.pop().delete() try: return self._prob.solve(sense=sense) except lp.SolverError as e: raise_from(MOMAError(text_type(e)), e) finally: self._remove_constr = []
Remove old constraints and then solve the current problem. Args: sense: Minimize or maximize the objective. (:class:`.lp.ObjectiveSense) Returns: The Result object for the solved LP problem
codesearchnet
def remove_server_data(server_id): logger.debug("Removing server from serverdata") data = datatools.get_data() if server_id in data["discord"]["servers"]: data["discord"]["servers"].pop(server_id) datatools.write_data(data)
Remove a server from the server data Args: server_id (int): The server to remove from the server data
juraj-google-style
def _PrintPreprocessingInformation(self, storage_reader, session_number=None): knowledge_base_object = knowledge_base.KnowledgeBase() storage_reader.ReadPreprocessingInformation(knowledge_base_object) system_configuration = knowledge_base_object.GetSystemConfigurationArtifact( session_id...
Prints the details of the preprocessing information. Args: storage_reader (StorageReader): storage reader. session_number (Optional[int]): session number.
juraj-google-style
def __init__(self, k_ranges, query_spec, key_range_iter_cls): self._key_ranges = k_ranges self._query_spec = query_spec self._key_range_iter_cls = key_range_iter_cls self._current_iter = None self._current_key_range = None
Init. Args: k_ranges: a key_ranges._KeyRanges object. query_spec: a model.query_spec object that defines how to retrieve entities from datastore. key_range_iter_cls: the class that iterates over a single key range. The value yielded by this class is yielded.
juraj-google-style
def get_numeric_sort_key_fn(numeric_values): value_types = _get_all_types(numeric_values) if len(value_types) != 1: raise ValueError(f'No common value type in {numeric_values}') value_type = next(iter(value_types)) if value_type == NUMBER_TYPE: return _get_value_as_primitive_value va...
Creates a function that can be used as a sort key or to compare the values. Maps to primitive types and finds the biggest common subset. Consider the values "05/05/2010" and "August 2007". With the corresponding primitive values (2010.,5.,5.) and (2007.,8., None). These values can be compared by year and date so we map...
github-repos
def setup_logging(verbosity, formats=None): if (formats is None): formats = {} log_level = logging.INFO log_format = formats.get('info', INFO_FORMAT) if sys.stdout.isatty(): log_format = formats.get('color', COLOR_FORMAT) if (verbosity > 0): log_level = logging.DEBUG ...
Configure a proper logger based on verbosity and optional log formats. Args: verbosity (int): 0, 1, 2 formats (dict): Optional, looks for `info`, `color`, and `debug` keys which may override the associated default log formats.
codesearchnet
def __spawn_new_request(self): first_in_line = self.queue.get_first(QueueItem.STATUS_QUEUED) if (first_in_line is None): return False while self.routing.is_treshold_reached(first_in_line.request): self.queue.move(first_in_line, QueueItem.STATUS_CANCELLED) first_in_line = self.queue.g...
Spawn the first queued request if there is one available. Returns: bool: True if a new request was spawned, false otherwise.
codesearchnet
def get(self, dash_id): data = json.loads(r_db.hmget(config.DASH_CONTENT_KEY, dash_id)[0]) return build_response(dict(data=data, code=200))
Read dashboard content. Args: dash_id: dashboard id. Returns: A dict containing the content of that dashboard, not include the meta info.
codesearchnet
def __init__(self, credentials): if not has_httplib2: raise ImportError("No module named httplib2") super(GAPDecoratorAuthMethod, self).__init__() self._http = None self._credentials = credentials self._action_token = None
Initialize auth method with existing credentials. Args: credentials: OAuth2 credentials obtained via GAP OAuth2 library.
juraj-google-style
def __init__(self, label, ast_node, *, line_number=None, path): self.label = label self.ast_node = ast_node if line_number: self.line_number = line_number elif ast_node: self.line_number = ast_node.lineno else: self.line_number = None ...
Create a Node that can be used in a CFG. Args: label(str): The label of the node, describing its expression. line_number(Optional[int]): The line of the expression of the Node.
juraj-google-style
def pprint_cell(self, row, col): ndims = self.ndims if col >= self.cols: raise Exception("Maximum column index is %d" % self.cols-1) elif row >= self.rows: raise Exception("Maximum row index is %d" % self.rows-1) elif row == 0: if col >= ndims...
Formatted contents of table cell. Args: row (int): Integer index of table row col (int): Integer index of table column Returns: Formatted table cell contents
juraj-google-style
def ProcessStorage(self): self._CheckStorageFile(self._storage_file_path) self._status_view.SetMode(self._status_view_mode) self._status_view.SetStorageFileInformation(self._storage_file_path) status_update_callback = self._status_view.GetAnalysisStatusUpdateCallback() session = engine.BaseEngine.Cr...
Processes a plaso storage file. Raises: BadConfigOption: when a configuration parameter fails validation. RuntimeError: if a non-recoverable situation is encountered.
codesearchnet
def remove_delegate(self, callback): if (callback not in self._delegate_methods): return self._delegate_methods.remove(callback)
Unregisters a registered delegate function or a method. Args: callback(function): method to trigger when push center receives events
codesearchnet
def convert_inner_node_data(nested, wrap=False): def _is_serialized_node_data(nested): if isinstance(nested, list) and len(nested) in [3, 4] and isinstance(nested[0], str): return True return False def _is_atomic_nested(nested): if isinstance(nested, ListWrapper): ...
Either wraps or unwraps innermost node data lists in `ListWrapper` objects. Args: nested: A nested data structure. wrap: If `True`, wrap innermost lists in `ListWrapper` objects. If `False`, unwraps `ListWrapper` objects into lists. Returns: Structure of same type as nested, with lists wrapped/unwrapped.
github-repos
def _remove_outliers_from_hist(hist: Hist, outliers_start_index: int, outliers_removal_axis: OutliersRemovalAxis) -> None: if outliers_start_index > 0: x = ctypes.c_int(0) y = ctypes.c_int(0) z = ctypes.c_int(0) outliers_removal_axis_valu...
Remove outliers from a given histogram. Args: hist: Histogram to check for outliers. outliers_start_index: Index in the truth axis where outliers begin. outliers_removal_axis: Axis along which outliers removal will be performed. Usually the particle level aixs. Returns: None. The histogram is modified in place.
juraj-google-style
def train_validation_split(arrays, validation_split): def _can_split(t): tensor_types = _get_tensor_types() return isinstance(t, tensor_types) or t is None flat_arrays = nest.flatten(arrays) unsplitable = [type(t) for t in flat_arrays if not _can_split(t)] if unsplitable: raise ...
Split arrays into train and validation subsets in deterministic order. The last part of data will become validation data. Args: arrays: Tensors to split. Allowed inputs are arbitrarily nested structures of Tensors and NumPy arrays. validation_split: Float between 0 and 1. The proportion of the dataset to include in t...
github-repos
def merged(cls, *flatterms: 'FlatTerm') -> 'FlatTerm': return cls(cls._combined_wildcards_iter(sum(flatterms, cls.empty())))
Concatenate the given flatterms to a single flatterm. Args: *flatterms: The flatterms which are concatenated. Returns: The concatenated flatterms.
juraj-google-style
def _ParseIntegerValue(self, byte_stream, file_offset): data_type_map = self._GetDataTypeMap('int32be') try: return self._ReadStructureFromByteStream(byte_stream, file_offset, data_type_map) except (ValueError, errors.ParseError) as exception: raise errors.ParseError('Unable to parse integer...
Parses an integer value. Args: byte_stream (bytes): byte stream. file_offset (int): offset of the attribute data relative to the start of the file-like object. Returns: int: integer value. Raises: ParseError: when the integer value cannot be parsed.
codesearchnet
def get(cls, keyval, key='id', user_id=None): if keyval is None: return None if (key in cls.__table__.columns and cls.__table__.columns[key].primary_key): return cls.query.get(keyval) else: result = cls.query....
Fetches a single instance which has value `keyval` for the attribute `key`. Args: keyval: The value of the attribute. key (str, optional): The attribute to search by. By default, it is 'id'. Returns: A model instance if found. Else None. Examples: >>> User.get(35) user35@i.com >>> User.get('user35@i.com', key=...
juraj-google-style
def write_table(self, table, rows, append=False, gzip=False): _write_table(self.root, table, rows, self.table_relations(table), append=append, gzip=gzip, encoding=self.encoding)
Encode and write out *table* to the profile directory. Args: table: The name of the table to write rows: The rows to write to the table append: If `True`, append the encoded rows to any existing data. gzip: If `True`, compress the resulting table with `gzip`. The table's filename will have `.gz` appended.
juraj-google-style
def get_children_graph(self, item_ids=None, language=None, forbidden_item_ids=None): if forbidden_item_ids is None: forbidden_item_ids = set() def _children(item_ids): if item_ids is None: items = Item.objects.filter(active=True).prefetch_related('childr...
Get a subgraph of items reachable from the given set of items through the 'child' relation. Args: item_ids (list): items which are taken as roots for the reachability language (str): if specified, filter out items which are not available in the given language Returns: dict: item id -> list of items (child items), roo...
juraj-google-style
def update_data(self, index, data): datapack = self.built_embed.to_dict()['fields'][index] self.built_embed.set_field_at(index, name=datapack['name'], value=data, inline=datapack['inline'])
Updates a particular datapack's data Args: index (int): The index of the datapack data (str): The new value to set for this datapack
codesearchnet
def __init__(self, input_filename="lammps.in", bin="lammps"): self.lammps_bin = bin.split() if not which(self.lammps_bin[-1]): raise RuntimeError( "LammpsRunner requires the executable {} to be in the path. " "Please download and install LAMMPS from "...
LAMMPS wrapper Args: input_filename (string): input file name bin (string): command to run, excluding the input file name
juraj-google-style
def __init__(self, input_reader=None, output_writer=None): super(PsortTool, self).__init__( input_reader=input_reader, output_writer=output_writer) self._analysis_manager = analysis_manager.AnalysisPluginManager self._analysis_plugins = None self._analysis_plugins_output_format = None s...
Initializes the CLI tool object. Args: input_reader (Optional[InputReader]): input reader, where None indicates that the stdin input reader should be used. output_writer (Optional[OutputWriter]): output writer, where None indicates that the stdout output writer should be used.
juraj-google-style
def create_failover_dns(self, primary_region='us-east-1'): dns_record = self.generated.dns()['global'] zone_ids = get_dns_zone_ids(env=self.env, facing=self.elb_subnet) elb_dns_aws = find_elb(name=self.app_name, env=self.env, region=self.region) elb_dns_zone_id = find_elb_dns_z...
Create dns entries in route53 for multiregion failover setups. Args: primary_region (str): primary AWS region for failover Returns: Auto-generated DNS name.
juraj-google-style
def _repeated_field_to_json(field, row_value): item_field = copy.deepcopy(field) item_field._mode = "NULLABLE" values = [] for item in row_value: values.append(_field_to_json(item_field, item)) return values
Convert a repeated/array field to its JSON representation. Args: field ( \ :class:`~google.cloud.bigquery.schema.SchemaField`, \ ): The SchemaField to use for type conversion and field name. The field mode must equal ``REPEATED``. row_value (Sequence[any]): A sequence of values to convert to JSON-serializable values. ...
juraj-google-style
def __contains__(self, id): if not isinstance(id, int): raise TypeError(id) return id in self._map
Return if the spreadsheet has a worksheet with the given id. Args: id (int): numeric id of the worksheet Returns: bool: ``True`` if such a worksheet is present else ``False`` Raises: TypeError: if ``id`` is not an ``int``
juraj-google-style
def reaction_charge(reaction, compound_charge): charge_sum = 0.0 for (compound, value) in reaction.compounds: charge = compound_charge.get(compound.name, float('nan')) charge_sum += (charge * float(value)) return charge_sum
Calculate the overall charge for the specified reaction. Args: reaction: :class:`psamm.reaction.Reaction`. compound_charge: a map from each compound to charge values.
codesearchnet
def heightmap_normalize( hm: np.ndarray, mi: float = 0.0, ma: float = 1.0 ) -> None: lib.TCOD_heightmap_normalize(_heightmap_cdata(hm), mi, ma)
Normalize heightmap values between ``mi`` and ``ma``. Args: mi (float): The lowest value after normalization. ma (float): The highest value after normalization.
juraj-google-style
def empty(self) -> 'Builder': return self._to_builder(_evaluation.EmptyFunction(self.node.context, self.node, []))
The FHIRPath empty() function. Returns: An expression that evaluates to True if the parent evaluates to empty.
github-repos
def ones_matrix_band_part(rows, cols, num_lower, num_upper, out_shape=None): if all([isinstance(el, int) for el in [rows, cols, num_lower, num_upper]]): if num_lower < 0: num_lower = rows - 1 if num_upper < 0: num_upper = cols - 1 lower_mask = np.tri(cols, rows, num_lower).T upper_...
Matrix band part of ones. Args: rows: int determining number of rows in output cols: int num_lower: int, maximum distance backward. Negative values indicate unlimited. num_upper: int, maximum distance forward. Negative values indicate unlimited. out_shape: shape to reshape output by. Returns: Tensor of size rows * co...
juraj-google-style
def get_permissions(self, grp_name, resource): self.project_service.set_auth(self._token_project) return self.project_service.get_permissions(grp_name, resource)
Get permissions associated the group has with the given resource. Args: grp_name (string): Name of group. resource (intern.resource.boss.Resource): Identifies which data model object to operate on. Returns: (list): List of permissions. Raises: requests.HTTPError on failure.
codesearchnet
def _ParseDistributedTrackingIdentifier(self, parser_mediator, uuid_object, origin): if (uuid_object.version == 1): event_data = windows_events.WindowsDistributedLinkTrackingEventData(uuid_object, origin) date_time = dfdatetime_uuid_time.UUIDTime(timestamp=uuid_object.time) event = time_even...
Extracts data from a Distributed Tracking identifier. Args: parser_mediator (ParserMediator): mediates interactions between parsers and other components, such as storage and dfvfs. uuid_object (uuid.UUID): UUID of the Distributed Tracking identifier. origin (str): origin of the event (event source). Returns: str: UUI...
codesearchnet
def convolve(image, pixel_filter, channels=3, name=None): with tf.name_scope(name, 'convolve'): tf.compat.v1.assert_type(image, tf.float32) channel_filter = tf.eye(channels) filter_ = (tf.expand_dims(tf.expand_dims(pixel_filter, (- 1)), (- 1)) * tf.expand_dims(tf.expand_dims(channel_filter, ...
Perform a 2D pixel convolution on the given image. Arguments: image: A 3D `float32` `Tensor` of shape `[height, width, channels]`, where `channels` is the third argument to this function and the first two dimensions are arbitrary. pixel_filter: A 2D `Tensor`, representing pixel weightings for the kernel. This will be ...
codesearchnet
def get_request(profile, resource): url = get_url(profile, resource) headers = get_headers(profile) response = requests.get(url, headers=headers) return response.json()
Do a GET request to Github's API. Args: profile A profile generated from ``simplygithub.authentication.profile``. Such profiles tell this module (i) the ``repo`` to connect to, and (ii) the ``token`` to connect with. resource The part of a Github API URL that comes after ``.../:repo/git``. For instance, for ``.../:r...
codesearchnet
def random_get_int_mean( rnd: Optional[tcod.random.Random], mi: int, ma: int, mean: int ) -> int: return int( lib.TCOD_random_get_int_mean( rnd.random_c if rnd else ffi.NULL, mi, ma, mean ) )
Return a random weighted integer in the range: ``mi`` <= n <= ``ma``. The result is affacted by calls to :any:`random_set_distribution`. Args: rnd (Optional[Random]): A Random instance, or None to use the default. low (int): The lower bound of the random range, inclusive. high (int): The upper bound of the random ran...
juraj-google-style
def regex(self, regex = None): if regex is None: return self._regex if self._type != 'string': sys.stderr.write('can not set __regex__ for %s' % self._type) return if not isinstance(regex, (basestring, _REGEX_TYPE)): raise ValueError('__regex__') self._regex = regex
Regex Sets or gets the regular expression used to validate the Node Arguments: regex {str} -- A standard regular expression string Raises: ValueError Returns: None | str
juraj-google-style
def can_transition(self, status_from: str, status_to: str) -> bool: if (not self.STATUSES.can_transition(status_from=status_from, status_to=status_to)): _logger.info('`%s` tried to transition from status `%s` to non permitted status `%s`', str(self), status_from, status_to) return False return T...
Update the status of the current instance. Returns: boolean: if the instance is updated.
codesearchnet
def make_hello_bot_agent() -> DefaultAgent: skill_hello = PatternMatchingSkill(['Hello world'], patterns=['hi', 'hello', 'good day']) skill_bye = PatternMatchingSkill(['Goodbye world', 'See you around'], patterns=['bye', 'chao', 'see you']) skill_fallback = PatternMatchingSkill(["I don't understand, sorry",...
Builds agent based on PatternMatchingSkill and HighestConfidenceSelector. This is agent building tutorial. You can use this .py file to check how hello-bot agent works. Returns: agent: Agent capable of handling several simple greetings.
codesearchnet
def get_sample(self, md5): if (len(md5) < 32): md5 = self.get_full_md5(md5, self.sample_collection) sample_info = self.database[self.sample_collection].find_one({'md5': md5}) if (not sample_info): return None try: grid_fs_id = sample_info['__grid_fs'] sample_info = self.c...
Get the sample from the data store. This method first fetches the data from datastore, then cleans it for serialization and then updates it with 'raw_bytes' item. Args: md5: The md5 digest of the sample to be fetched from datastore. Returns: The sample dictionary or None
codesearchnet
def read_vocab_file(file_path): with file_io.FileIO(file_path, 'r') as f: vocab_pd = pd.read_csv(f, header=None, names=['vocab', 'count'], dtype=str, na_filter=False) vocab = vocab_pd['vocab'].tolist() ex_count = vocab_pd['count'].astype(int).tolist() return (vocab, ex_count)
Reads a vocab file to memeory. Args: file_path: Each line of the vocab is in the form "token,example_count" Returns: Two lists, one for the vocab, and one for just the example counts.
codesearchnet
def save_output(results, output_directory='output'): aggregate_reports = results['aggregate_reports'] forensic_reports = results['forensic_reports'] if os.path.exists(output_directory): if (not os.path.isdir(output_directory)): raise ValueError('{0} is not a directory'.format(output_dire...
Save report data in the given directory Args: results (OrderedDict): Parsing results output_directory: The patch to the directory to save in
codesearchnet
def validate_restore_function(trackable, registered_name): try: _saver_registry.name_lookup(registered_name) except LookupError: raise ValueError(f"Error when restoring object {trackable} from checkpoint. This object was saved using a registered saver named '{registered_name}', but this saver ca...
Validates whether the trackable can be restored with the saver. When using a checkpoint saved with a registered saver, that same saver must also be also registered when loading. The name of that saver is saved to the checkpoint and set in the `registered_name` arg. Args: trackable: A `Trackable` object. registered_na...
github-repos
def check_whitelist(host, whitelist): if (':' not in host): host = (host + ':80') if (host in whitelist): return True return any((match_host(host, pattern) for pattern in whitelist))
Check a given request host against a whitelist. Args: host (str) : A host string to compare against a whitelist. If the host does not specify a port, then ``":80"`` is implicitly assumed. whitelist (seq[str]) : A list of host patterns to match against Returns: ``True``, if ``host`` matches any pattern in ``whitelis...
codesearchnet
def CompleteBreakpoint(self, breakpoint_id): with self._lock: self._completed.add(breakpoint_id) if (breakpoint_id in self._active): self._active.pop(breakpoint_id).Clear()
Marks the specified breaking as completed. Appends the ID to set of completed breakpoints and clears it. Args: breakpoint_id: breakpoint ID to complete.
codesearchnet
def merge(self, ts): if ts.shape[1:] != self.shape[1:]: raise ValueError('Timeseries to merge must have compatible shapes') indices = np.vstack((self.tspan, ts.tspan)).argsort() return np.vstack((self, ts))[indices]
Merge another timeseries with this one Arguments: ts (Timeseries): The two timeseries being merged must have the same shape except for axis 0. Returns: Resulting merged timeseries which can have duplicate time points.
juraj-google-style
def reset_logformat_timestamped(logger: logging.Logger, extraname: str = "", level: int = logging.INFO) -> None: namebit = extraname + ":" if extraname else "" fmt = ("%(asctime)s.%(msecs)03d:%(levelname)s:%(name)s:" + namebit + "%(...
Apply a simple time-stamped log format to an existing logger, and set its loglevel to either ``logging.DEBUG`` or ``logging.INFO``. Args: logger: logger to modify extraname: additional name to append to the logger's name level: log level to set
juraj-google-style
def parse_meta(meta): resources = {} for name in meta: if name.startswith("$"): continue resources[name] = resource = {} for action in meta[name]: if action.startswith("$"): continue url, httpmethod = res_to_url(name, action) ...
Parse metadata of API Args: meta: metadata of API Returns: tuple(url_prefix, auth_header, resources)
juraj-google-style
def _ConvertRowToUnicode(self, parser_mediator, row): for (key, value) in iter(row.items()): if isinstance(value, py2to3.UNICODE_TYPE): continue try: row[key] = value.decode(self._encoding) except UnicodeDecodeError: replaced_value = value.decode(self._enc...
Converts all strings in a DSV row dict to Unicode. Args: parser_mediator (ParserMediator): mediates interactions between parsers and other components, such as storage and dfvfs. row (dict[str, bytes]): a row from a DSV file, where the dictionary key contains the column name and the value a binary string. Returns: dic...
codesearchnet
def from_surface(renderer, surface): texture = object.__new__(Texture) texture._ptr = check_ptr_err(lib.SDL_CreateTextureFromSurface(renderer._ptr, surface._ptr)) return texture
Create a texture from an existing surface. Args: surface (Surface): The surface containing pixel data used to fill the texture. Returns: Texture: A texture containing the pixels from surface. Raises: SDLError: If an error is encountered.
juraj-google-style
def parsemeta(metadataloc): if os.path.isdir(metadataloc): metalist = glob.glob(os.path.join(metadataloc, METAPATTERN)) if not metalist: raise MTLParseError( "No files matching metadata file pattern in directory %s." % metadataloc) elif ...
Parses the metadata from a Landsat image bundle. Arguments: metadataloc: a filename or a directory. Returns metadata dictionary
juraj-google-style
def _all_reduce(self, reduce_op, value, replica_id, options): raise NotImplementedError('_all_reduce must be implemented in descendants.')
All-reduce the `value` across all replicas so that all get the result. `value` can be a nested structure of tensors or `IndexedSlices`. The implementation should generally batch the all-reduces when possible. `options` can be set to hint the batching behavior. This API must be called in a replica context. Args: redu...
github-repos
def get_container_setting(name, container, settings): ret = dict() ps_cmd = list() ps_cmd_validate = list() container_path = 'IIS:\\{0}\\{1}'.format(container, name) if (not settings): log.warning('No settings provided') return ret ps_cmd.append('$Settings = @{};') for settin...
Get the value of the setting for the IIS container. .. versionadded:: 2016.11.0 Args: name (str): The name of the IIS container. container (str): The type of IIS container. The container types are: AppPools, Sites, SslBindings settings (dict): A dictionary of the setting names and their values. Returns: dict: A dict...
codesearchnet
def __getattr__(self, name: str): if name.startswith('__'): raise AttributeError(name) attr = getattr(self._builder, name) if isinstance(attr, expressions.Builder) and self._sealed: raise self._fhir_path_sealed_error(name) return ColumnExpressionBuilder._wrap_any(self, attr)
Redirects to the expressions.Builder when the attribute is not here. Note that in Python, '__getattribute__' always gets called first (the highest priority). Thus for attributes which has already been defined in this class, they won't be redirected to the expressions.Builder. Args: name: The attribute name as a strin...
github-repos
def visit_statements(self, nodes): for node in nodes: if isinstance(node, gast.AST): self.to_prepend.append(deque()) self.to_append.append(deque()) node = self.visit(node) self.visit_statements(self.to_prepend.pop()) if isinstance(node, gast.AST): self.to...
Visit a series of nodes in a node body. This function is factored out so that it can be called recursively on statements that are appended or prepended. This allows e.g. a nested expression to prepend a statement, and that statement can prepend a statement again, etc. Args: nodes: A list of statements. Returns: A li...
juraj-google-style
def wait_while_reachable(self, servers, timeout=60): t_start = time.time() while True: try: for server in servers: server_info = self.connection( hostname=server, timeout=5).admin.command('ismaster') ...
wait while all servers be reachable Args: servers - list of servers
juraj-google-style
def write_vasp_input(self, vasp_input_set=MPRelaxSet, output_dir=".", create_directory=True, **kwargs): vasp_input_set(self.final_structure, **kwargs).write_input( output_dir, make_dir_if_not_present=create_directory) with open(os.path.join(output_dir, "tran...
Writes VASP input to an output_dir. Args: vasp_input_set: pymatgen.io.vaspio_set.VaspInputSet like object that creates vasp input files from structures output_dir: Directory to output files create_directory: Create the directory if not present. Defaults to True. \\*\\*kwargs: All keyword args supported by the VASP inp...
juraj-google-style
def shape(input, name=None, out_type=None): if out_type is None: if flags.config().tf_shape_default_int64.value(): out_type = dtypes.int64 else: out_type = dtypes.int32 return shape_internal(input, name, optimize=True, out_type=out_type)
Returns the shape of a tensor. This operation returns a 1-D integer tensor representing the shape of `input`. For example: ```python t = tf.constant([[[1, 1, 1], [2, 2, 2]], [[3, 3, 3], [4, 4, 4]]]) tf.shape(t) # [2, 2, 3] ``` Args: input: A `Tensor` or `SparseTensor`. name: A name for the operation (optional). ou...
github-repos
def covariance_to_correlations(covariance): diagonal_ind = np.arange(covariance.shape[1]) diagonal_els = covariance[(:, diagonal_ind, diagonal_ind)] result = (covariance / np.sqrt((diagonal_els[(:, :, None)] * diagonal_els[(:, None, :)]))) result[np.isinf(result)] = 0 return np.clip(np.nan_to_num(re...
Transform a covariance matrix into a correlations matrix. This can be seen as dividing a covariance matrix by the outer product of the diagonal. As post processing we replace the infinities and the NaNs with zeros and clip the result to [-1, 1]. Args: covariance (ndarray): a matrix of shape (n, p, p) with for n prob...
codesearchnet
def delete_unspent_outputs(self, *unspent_outputs): if unspent_outputs: return backend.query.delete_unspent_outputs( self.connection, *unspent_outputs)
Deletes the given ``unspent_outputs`` (utxos). Args: *unspent_outputs (:obj:`tuple` of :obj:`dict`): Variable length tuple or list of unspent outputs.
juraj-google-style
def init_app(self, app): app.url_rule_class = partial(NavigationRule, copilot=self) app.context_processor(self.inject_context)
Register the extension with the application. Args: app (flask.Flask): The application to register with.
juraj-google-style
def _get_ssm_parameter(self, p): try: response = self._ssm.get_parameter(Name=p, WithDecryption=True) return response.get('Parameter', {}).get('Value', None) except Exception as ruh_roh: logging.error(ruh_roh, exc_info=False) return None
Get parameters from Simple Systems Manager Args: p - a parameter name Returns: a value, decrypted if needed, if successful or None if things go sideways.
juraj-google-style
def GrabObject(self, identifier): if (identifier not in self._values): raise KeyError('Missing cached object for identifier: {0:s}'.format(identifier)) cache_value = self._values[identifier] if (not cache_value): raise RuntimeError('Missing cache value for identifier: {0:s}'.format(identifie...
Grabs a cached object based on the identifier. This method increments the cache value reference count. Args: identifier (str): VFS object identifier. Raises: KeyError: if the VFS object is not found in the cache. RuntimeError: if the cache value is missing.
codesearchnet
def extract_paths_dead(self, paths, ignore_nopath): if (not self._has_guestfs): raise LagoException('guestfs module not available, cannot '('extract files with libguestfs')) LOGGER.debug('%s: attempting to extract files with libguestfs', self.vm.name()) guestfs_tools.extract_paths(disk_path=self.vm....
Extract the given paths from the domain using guestfs. Using guestfs can have side-effects and should be used as a second option, mainly when SSH is not available. Args: paths(list of str): paths to extract ignore_nopath(boolean): if True will ignore none existing paths. Returns: None Raises: :exc:`~lago.utils.LagoE...
codesearchnet
def _get_filters(nodes, context): filters = [] for node in nodes: for filter_block in sql_context_helpers.get_filters(node, context): filter_sql_expression = _transform_filter_to_sql(filter_block, node, context) filters.append(filter_sql_expression) return filters
Get filters to apply to a list of SqlNodes. Args: nodes: List[SqlNode], the SqlNodes to get filters for. context: CompilationContext, global compilation state and metadata. Returns: List[Expression], list of SQLAlchemy expressions.
codesearchnet
def generate_func_call(name, args=None, kwargs=None): all_args = [] if args: all_args.extend(args) if kwargs: all_args.extend(('{}={}'.format(k, v) for (k, v) in kwargs if (v is not None))) return '{}({})'.format(name, ', '.join(all_args))
Generates code to call a function. Args: name (str): The function name. args (list[str]): Each positional argument. kwargs (list[tuple]): Each tuple is (arg: str, value: str). If value is None, then the keyword argument is omitted. Otherwise, if the value is not a string, then str() is called on it. Returns: str: Cod...
codesearchnet
def call(self, y_true, y_pred): raise NotImplementedError('Must be implemented in subclasses.')
Invokes the `Loss` instance. Args: y_true: Ground truth values. shape = `[batch_size, d0, .. dN]`, except sparse loss functions such as sparse categorical crossentropy where shape = `[batch_size, d0, .. dN-1]` y_pred: The predicted values. shape = `[batch_size, d0, .. dN]` Returns: Loss values with the shape `[batch_...
github-repos