Database / manifests /2c /github.com__pachterlab__sleuth.json
opsecsystems's picture
Scripts of 2026-09-29: 4 new block(s), 1817 manifest(s), 0 removed (part 2)
4c3c07f verified
Raw History Blame Contribute Delete
5.82 kB
{
"format": "oscr-script-manifest/1",
"repository": "github.com/pachterlab/sleuth",
"url": "https://github.com/pachterlab/sleuth",
"host": "github.com",
"commit": "15457c45697bf9c4e0b593c2a9e187c3bb6a5cb3",
"license": "GPL-3.0",
"license_confirmed_by": "license file LICENSE",
"redistribution": "yes",
"files": [
{
"path": "LICENSE",
"sha256": "c61f12da7cdad526bdcbed47a4c0a603e60dbbfdaf8b66933cd088e9132c303f",
"language": "License",
"lines": 621,
"truncated": false,
"block": 6,
"row": 2118
},
{
"path": "R/bootstrap.R",
"sha256": "5815ceb7a281535b34c35982b3bb3004073b0bd5943e75d50a28a40c1f74bf94",
"language": "R",
"lines": 525,
"truncated": false,
"block": 8,
"row": 4719
},
{
"path": "R/gene_analysis.R",
"sha256": "32d017c039f0c54ae0cc79e6c9d408ceb73fb485dad59a53edc98f1e80b70fbb",
"language": "R",
"lines": 29,
"truncated": false,
"block": 8,
"row": 1638
},
{
"path": "R/hexamers.R",
"sha256": "ae389371932669a89baeaacb83dd7a24e292ad5f2657fa1a20bf018d3a487f9a",
"language": "R",
"lines": 4097,
"truncated": false,
"block": 8,
"row": 5085
},
{
"path": "R/import.R",
"sha256": "b7f0dac7cd70ec1d28f70b39d04c48500851e1f46eb7e5adf8c1d15cd3eea6f4",
"language": "R",
"lines": 24,
"truncated": false,
"block": 8,
"row": 1561
},
{
"path": "R/kallisto.R",
"sha256": "f0f5553dfbb37c2b0fd149e0460985962eb276afa97b8f8502e5085801e6ca13",
"language": "R",
"lines": 178,
"truncated": false,
"block": 8,
"row": 3374
},
{
"path": "R/likelihood.R",
"sha256": "782b01bf36b0efc71fafdeefdb62e008ad4fbcb6f85e50368bd000a5a27fcddb",
"language": "R",
"lines": 114,
"truncated": false,
"block": 8,
"row": 2870
},
{
"path": "R/matrix.R",
"sha256": "020cf768894bebc0f83d1117972ccf2d761f8f43fddb2fd95036434de4e6762b",
"language": "R",
"lines": 61,
"truncated": false,
"block": 8,
"row": 2268
},
{
"path": "R/measurement_error.R",
"sha256": "7588bbe663977d6d0196fd16adc58912d585b60ac3b777d1291465c8b2d7480b",
"language": "R",
"lines": 583,
"truncated": false,
"block": 8,
"row": 4738
},
{
"path": "R/misc.R",
"sha256": "804446a0c71e05d09f6fa4c45e7d0970323dff83fc42e9b85c18600fe86b581b",
"language": "R",
"lines": 206,
"truncated": false,
"block": 8,
"row": 3623
},
{
"path": "R/model.R",
"sha256": "43e22b901540249b36e22bf44571d42b2cd31f0c7f76156f98e02dc0ab3970e4",
"language": "R",
"lines": 550,
"truncated": false,
"block": 8,
"row": 4769
},
{
"path": "R/plots.R",
"sha256": "399a2fe371f8ae20dc0f6e00c7c3cc36567c1640d4ecc5875dc5fdb51d98aeb9",
"language": "R",
"lines": 1095,
"truncated": false,
"block": 8,
"row": 5058
},
{
"path": "R/read_write.R",
"sha256": "facd06b250dc818dd7ad57ad319fb014f2195459ab3c42747a9f518e0dfda0ef",
"language": "R",
"lines": 455,
"truncated": false,
"block": 8,
"row": 4471
},
{
"path": "R/shiny.R",
"sha256": "8238a9fa0f7fd51392cc8f45f9c1bcef8fe165e5ce0d0b328304b80f9bf11cd2",
"language": "R",
"lines": 2106,
"truncated": false,
"block": 8,
"row": 5201
},
{
"path": "R/sleuth.R",
"sha256": "3bc33b9bf99fd170bd64cbc4dae1e5fbf906bacefbfa2e159831398c9e4c739a",
"language": "R",
"lines": 1306,
"truncated": false,
"block": 8,
"row": 5149
},
{
"path": "R/units.R",
"sha256": "b486fee344cfa6ae8c0b3858bf6ccbdcc12527fb1984196e815f55628b41d11d",
"language": "R",
"lines": 52,
"truncated": false,
"block": 8,
"row": 1823
},
{
"path": "README.md",
"sha256": "44a214158cdb8060465a2948817eee8acbea464dd2ef7749d63a0faad4240c9f",
"language": "Text",
"lines": 74,
"truncated": false,
"block": 8,
"row": 9997
},
{
"path": "inst/scripts/gen_hexamers.sh",
"sha256": "14506d8fca23a5787a534f00c9fe0366f0cceec37552353dd1d4fb73d0f1d28b",
"language": "Shell",
"lines": 5,
"truncated": false,
"block": 8,
"row": 6483
},
{
"path": "inst/scripts/hexamers.py",
"sha256": "fa4ccccd826a20b868dec1c3fa10c703c4adcb7dbfa8ae2882faaf107431c859",
"language": "Python",
"lines": 3,
"truncated": false,
"block": 6,
"row": 20694
},
{
"path": "tests/testthat.R",
"sha256": "0e604a95642713e4a27002cbe717abce97e3133c86ef5731eaa6dd7c69b8687a",
"language": "R",
"lines": 4,
"truncated": false,
"block": 8,
"row": 1264
},
{
"path": "tests/testthat/helper-setup.R",
"sha256": "d2ae4271e5346902ba1510e5363aa4b9e633080f0f020a4b88e7d396983d1f5e",
"language": "R",
"lines": 31,
"truncated": false,
"block": 8,
"row": 1744
},
{
"path": "tests/testthat/test-analysis.R",
"sha256": "38a1a2e85a838d31733ee330891a46f00260b846cace3c625811a79bc9ed8d81",
"language": "R",
"lines": 33,
"truncated": false,
"block": 8,
"row": 1758
},
{
"path": "tests/testthat/test-lintr.R",
"sha256": "8317e89058970c1ee313fde1257cf73b3fc76a8f16ad42fa2561cd74e9b65b6c",
"language": "R",
"lines": 6,
"truncated": false,
"block": 8,
"row": 1283
},
{
"path": "tests/testthat/test-prep.R",
"sha256": "5416c4373c16b4d9e862bc670974098c11982622b7c214dcdb62deeeb5e5d32a",
"language": "R",
"lines": 65,
"truncated": false,
"block": 8,
"row": 2261
},
{
"path": "tests/testthat/test-read.R",
"sha256": "2b6107f93fa90e780ca04f1e99c60c87a969248791a69dfa35a1acc071a26ea9",
"language": "R",
"lines": 71,
"truncated": false,
"block": 8,
"row": 2133
},
{
"path": "vignettes/intro.Rmd",
"sha256": "7d6387d7e1127c4f22db48dc5123b5aed13a004b0e0a2a8d352f106bc642d306",
"language": "R",
"lines": 230,
"truncated": false,
"block": 8,
"row": 4265
}
]
}