Download integrate_mednotes.py from PiotrSty/polocrbench-train-pool-v1: direct link, hf CLI and curl.
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https://huggingface.co/datasets/PiotrSty/polocrbench-train-pool-v1/resolve/main/integrate_mednotes.py
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hf download hf://datasets/PiotrSty/polocrbench-train-pool-v1/integrate_mednotes.py
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curl -L -o integrate_mednotes.py https://huggingface.co/datasets/PiotrSty/polocrbench-train-pool-v1/resolve/main/integrate_mednotes.py
3.88 kB
| """Integrate the self-licensed contemporary medical calendar notes into | |
| polocrbench-train-pool-v1 (handwriting-mednotes source). | |
| License holder: Piotr Styła (declared CC BY 4.0, 2026-10-23). | |
| Content: handwritten medical study/calendar notes (mostly page fragments | |
| with cut edges). Transcriptions are AI pre-annotation with [ucięte] (cut), | |
| [?], [skreślone] markers. Deterministic PII scan found no e-mail/phone/ | |
| PESEL/account strings; lecturer surnames appear as professional references. | |
| Content is study/training material with medical knowledge; no personal | |
| health records. | |
| """ | |
| import collections | |
| import hashlib | |
| import json | |
| import shutil | |
| from pathlib import Path | |
| BASE = Path('C:/Users/Hipek/OCR_external_data') | |
| WORK = BASE / 'skany-jadwiga-work' | |
| POOL = BASE / 'polocrbench-train-pool-v1' | |
| def sha(data): | |
| return hashlib.sha256(data).hexdigest() | |
| def main(): | |
| trans = {} | |
| for line in (WORK / 'transcriptions.jsonl').read_text(encoding='utf-8').splitlines(): | |
| row = json.loads(line) | |
| trans[row['page_id']] = row['text'] | |
| originals = {p.stem: sha(p.read_bytes()) for p in (WORK / 'originals').glob('*.jpg')} | |
| assert len(trans) == 49 | |
| rows = [] | |
| for stem in sorted(trans): | |
| src = WORK / 'pages' / f'{stem}.jpg' | |
| pool_id = 'hwmed_' + stem.lower() | |
| data = src.read_bytes() | |
| shutil.copyfile(src, POOL / 'images' / f'{pool_id}.jpg') | |
| rows.append({'id': pool_id, 'source': 'handwriting-mednotes', | |
| 'source_ref': 'self-licensed medical calendar notes ' | |
| '(license holder: Piotr Styła, CC BY 4.0, 2026-10-23)', | |
| 'image': f'images/{pool_id}.jpg', 'image_sha256': sha(data), | |
| 'text': trans[stem], 'text_sha256': sha(trans[stem].encode()), | |
| 'width': 700, 'height': 1000, 'split': 'train', | |
| 'license': 'cc-by-4.0', 'human_verified': False, 'gold': False, | |
| 'page_fragment': True, | |
| 'original_image_sha256': originals.get(stem), | |
| 'transcription': 'ai-preannotation-cut-markers'}) | |
| manifest_path = POOL / 'manifest.jsonl' | |
| existing = manifest_path.read_text(encoding='utf-8') | |
| manifest_path.write_text(existing + ''.join( | |
| json.dumps(r, ensure_ascii=False) + '\n' for r in rows), encoding='utf-8') | |
| report = json.loads((POOL / 'report.json').read_text(encoding='utf-8')) | |
| all_rows = [json.loads(s) for s in manifest_path.read_text(encoding='utf-8').splitlines()] | |
| report['schema'] = 'polocrbench-train-pool-v1.4' | |
| report['pages'] = len(all_rows) | |
| report['by_source'] = dict(collections.Counter(r['source'] for r in all_rows)) | |
| report['by_split'] = dict(collections.Counter(r['split'] for r in all_rows)) | |
| report['handwriting_mednotes_pages'] = len(rows) | |
| report['handwriting_mednotes_license'] = 'CC BY 4.0 (license holder: Piotr Styła)' | |
| report['handwriting_mednotes_content'] = 'study/training notes with medical knowledge (dosage schedules, disease patterns as taught); no personal health records; mostly page fragments with cut edges' | |
| report['licenses']['handwriting-mednotes'] = 'CC BY 4.0 (license holder: Piotr Styła)' | |
| (POOL / 'report.json').write_text(json.dumps(report, ensure_ascii=False, indent=2), | |
| encoding='utf-8') | |
| sums = {p.relative_to(POOL).as_posix(): sha(p.read_bytes()) | |
| for p in sorted(POOL.rglob('*')) if p.is_file() and p.name != 'checksums.json'} | |
| (POOL / 'checksums.json').write_text(json.dumps(sums, indent=2), encoding='utf-8') | |
| print(json.dumps({'mednotes_rows': len(rows), 'pool_pages': len(all_rows), | |
| 'by_source': report['by_source'], 'checksum_entries': len(sums)}, | |
| ensure_ascii=False, indent=2)) | |
| if __name__ == '__main__': | |
| main() | |