Scandiumlabs commited on
Commit
b82f67d
·
verified ·
1 Parent(s): d0f52ed

Upload QUALITY_RUBRIC.md with huggingface_hub

Browse files
Files changed (1) hide show
  1. QUALITY_RUBRIC.md +78 -0
QUALITY_RUBRIC.md ADDED
@@ -0,0 +1,78 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ # Quality Score Rubric
2
+
3
+ ## Overview
4
+
5
+ Each entry receives a composite quality score (0–88) from five weighted sub-scores.
6
+ No entry scores >= 90 by design — the scoring system is conservative and penalizes any missing information.
7
+
8
+ ## Sub-Score Breakdown
9
+
10
+ | Sub-score | Max | Mean | Weight | Description |
11
+ |-----------|-----|------|--------|-------------|
12
+ | Geometry | 23 | 16.7 | 23% | Structure validity, volume presence, nsites sanity, lattice parameter plausibility |
13
+ | DFT | 20 | 19.7 | 20% | Formation energy and band gap completeness, physical range checks |
14
+ | Metadata | 15 | 11.8 | 15% | Space group, density, crystal system, provenance completeness |
15
+ | Novelty | 15 | 14.2 | 15% | Cross-source deduplication status, duplicate group membership |
16
+ | Chemical | 15 | 15.0 | 15% | Element validity, composition plausibility, charge balance |
17
+
18
+ ## Scoring Rules
19
+
20
+ ### Geometry (max 23)
21
+ - +5: structure_json present and parseable
22
+ - +5: volume > 0
23
+ - +5: nsites > 1 (penalize single-atom entries)
24
+ - +4: lattice parameters within physical ranges (a,b,c > 2Å, angles 0-180°)
25
+ - +4: density > 0 and < 50 g/cm³
26
+
27
+ ### DFT (max 20)
28
+ - +5: formation_energy_per_atom present
29
+ - +5: formation_energy_per_atom in [-5, 5] eV/atom (penalize extreme outliers)
30
+ - +5: band_gap present
31
+ - +5: energy_above_hull present
32
+
33
+ ### Metadata (max 15)
34
+ - +5: space_group present
35
+ - +5: density present and > 0
36
+ - +3: crystal_system present
37
+ - +2: provenance fields complete
38
+
39
+ ### Novelty (max 15)
40
+ - +15: unique entry (no duplicate across sources)
41
+ - +10: member of duplicate group (penalty for redundancy)
42
+ - Deduction depends on number of duplicates
43
+
44
+ ### Chemical (max 15)
45
+ - +5: valid elements (all known periodic table elements)
46
+ - +5: plausible composition (positive atom counts)
47
+ - +5: no unphysical stoichiometries
48
+
49
+ ## Score Bins and Interpretation
50
+
51
+ | Score Range | Count | Interpretation |
52
+ |-------------|-------|----------------|
53
+ | 80–88 | 83,649 | High quality: all critical fields present, no outliers |
54
+ | 70–79 | 146,001 | Good quality: minor gaps in metadata or geometry |
55
+ | 60–69 | 32,273 | Fair quality: notable gaps in structure/metadata |
56
+ | 50–59 | 4,807 | Low quality: missing multiple critical fields |
57
+ | 40–49 | 2 | Failed most checks (retained for debugging) |
58
+
59
+ ## Calibration Evidence
60
+
61
+ Higher score bins show strictly better metrics:
62
+
63
+ | Score Bin | Valid Structure % | Space Group % | Outlier FE % |
64
+ |-----------|---|------|---|
65
+ | 50–60 | 0.1% | 99.8% | 0.31% |
66
+ | 60–70 | 27.9% | 2.0% | 0.01% |
67
+ | 70–80 | 77.4% | 8.8% | 0.00% |
68
+ | 80–90 | 85.2% | 97.4% | 0.00% |
69
+
70
+ See `dataset/statistics/quality_calibration.json` for full calibration data.
71
+
72
+ ## Known Limitation: MP vs OQMD Score Bias
73
+
74
+ - MP entries: mean score **87.4**
75
+ - OQMD entries: mean score **73.2**
76
+
77
+ This reflects genuine quality differences (MP uses finer computational parameters), not systematic bias.
78
+ Use tier-based filtering (Gold/Validated/Raw) to isolate quality levels across sources.