Guillermo Pinto commited on
Commit
a8b341f
·
verified ·
1 Parent(s): 186fa3a

Add 'with_full_clinical_metadata' configuration with full clinical metadata

Browse files
README.md CHANGED
@@ -45,6 +45,14 @@ configs:
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  path: with_embeddings_and_segmentation_splitted/validation-*
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  - split: test
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  path: with_embeddings_and_segmentation_splitted/test-*
 
 
 
 
 
 
 
 
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  - config_name: with_full_metadata
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  data_files:
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  - split: train
@@ -210,6 +218,177 @@ dataset_info:
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  num_examples: 1078
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  download_size: 5401845078
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  dataset_size: 9172336210.736
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
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  - config_name: with_full_metadata
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  features:
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  - name: image
 
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  path: with_embeddings_and_segmentation_splitted/validation-*
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  - split: test
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  path: with_embeddings_and_segmentation_splitted/test-*
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+ - config_name: with_full_clinical_metadata
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+ data_files:
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+ - split: train
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+ path: with_full_clinical_metadata/train-*
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+ - split: validation
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+ path: with_full_clinical_metadata/validation-*
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+ - split: test
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+ path: with_full_clinical_metadata/test-*
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  - config_name: with_full_metadata
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  data_files:
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  - split: train
 
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  num_examples: 1078
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  download_size: 5401845078
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  dataset_size: 9172336210.736
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+ - config_name: with_full_clinical_metadata
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+ features:
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+ - name: image
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+ dtype: image
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+ - name: label
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+ dtype:
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+ class_label:
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+ names:
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+ '0': benign
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+ '1': malignant
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+ - name: text
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+ dtype: string
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+ - name: patient_id
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+ dtype: string
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+ - name: text_embedding
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+ list: float32
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+ - name: segmentation_mask
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+ list:
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+ list:
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+ list: uint8
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+ - name: protocol
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+ dtype: string
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+ - name: view
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+ dtype:
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+ class_label:
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+ names:
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+ '0': Frontal
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+ '1': Right 45°
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+ '2': Right 90°
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+ '3': Left 45°
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+ '4': Left 90°
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+ '5': Unknown
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+ - name: record
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+ dtype: string
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+ - name: role
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+ dtype: string
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+ - name: age_current
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+ dtype: int64
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+ - name: age_at_visit
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+ dtype: int64
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+ - name: registration_date
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+ dtype: string
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+ - name: marital_status
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+ dtype:
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+ class_label:
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+ names:
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+ '0': Divorced
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+ '1': Married
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+ '2': Single
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+ '3': Widow
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+ - name: race
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+ dtype:
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+ class_label:
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+ names:
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+ '0': Asian
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+ '1': Black
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+ '2': Indigenous
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+ '3': Mulatto
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+ '4': Multiracial
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+ '5': White
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+ - name: visit_date
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+ dtype: string
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+ - name: complaints
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+ dtype: string
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+ - name: symptoms
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+ dtype: string
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+ - name: signs
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+ dtype: string
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+ - name: last_menstrual_period
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+ dtype: string
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+ - name: menopause
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+ dtype: string
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+ - name: menarche
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+ dtype: int64
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+ - name: eating_habits
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+ dtype:
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+ class_label:
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+ names:
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+ '0': '35.50'
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+ '1': High in fat
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+ '2': Low in fat
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+ '3': No fat
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+ - name: cancer_family
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+ dtype: string
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+ - name: family_history
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+ dtype: string
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+ - name: further_informations
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+ dtype: string
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+ - name: mammography
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+ dtype:
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+ class_label:
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+ names:
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+ '0': 'No'
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+ '1': 'Yes'
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+ - name: radiotherapy
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+ dtype:
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+ class_label:
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+ names:
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+ '0': 'No'
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+ '1': 'Yes'
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+ - name: plastic_surgery
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+ dtype:
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+ class_label:
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+ names:
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+ '0': 'No'
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+ '1': Yes, both breasts
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+ '2': Yes, left breast
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+ '3': Yes, right breast
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+ - name: prosthesis
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+ dtype:
331
+ class_label:
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+ names:
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+ '0': 'No'
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+ '1': Yes, both breasts
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+ '2': Yes, left breast
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+ '3': Yes, right breast
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+ - name: biopsy
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+ dtype:
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+ class_label:
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+ names:
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+ '0': 'No'
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+ '1': Yes, both breasts
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+ '2': Yes, left breast
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+ '3': Yes, right breast
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+ - name: use_of_hormone_replacement
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+ dtype:
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+ class_label:
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+ names:
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+ '0': 'No'
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+ '1': 'Yes'
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+ - name: nipple_changes
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+ dtype:
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+ class_label:
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+ names:
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+ '0': Yes, both breasts
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+ '1': Yes, left breast
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+ '2': Yes, right breast
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+ - name: is_there_signal_of_wart_on_breast
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+ dtype:
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+ class_label:
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+ names:
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+ '0': 'No'
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+ '1': Yes, both breasts
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+ '2': Yes, left breast
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+ '3': Yes, right breast
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+ - name: medical_further_informations
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+ dtype: string
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+ - name: body_temperature
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+ dtype: float64
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+ - name: protocol_smoked
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+ dtype: string
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+ - name: protocol_drank_coffee
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+ dtype: string
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+ - name: protocol_consumed_alcohol
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+ dtype: string
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+ - name: protocol_physical_exercise
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+ dtype: string
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+ - name: protocol_put_some_pomade_deodorant_or_products_at_breasts_or_armpits_region
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+ dtype: string
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+ splits:
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+ - name: train
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+ num_bytes: 6413706670.128
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+ num_examples: 4992
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+ - name: validation
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+ num_bytes: 1365720717.356
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+ num_examples: 1063
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+ - name: test
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+ num_bytes: 1385006096.848
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+ num_examples: 1078
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+ download_size: 5138311714
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+ dataset_size: 9164433484.332
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  - config_name: with_full_metadata
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  features:
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  - name: image
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