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| #!/usr/bin/env python3 | |
| """Build a deterministic, evidence-conditioned DeepResearch medium benchmark. | |
| Selection never uses model outputs. Every selected question has at least one | |
| successfully fetched, non-QA-dump teacher-provenance document containing the | |
| normalized gold answer. Questions are stratified by dataset difficulty, | |
| teacher outcome, and how much work an independent original-query search needs | |
| to surface the answer after QA-dump documents are blocked. The independently | |
| retrieved evidence URL need not be the exact URL used by the teacher: exact- | |
| content deduplication deliberately retains only one representative URL in FTS. | |
| """ | |
| from __future__ import annotations | |
| import argparse | |
| import hashlib | |
| import json | |
| import random | |
| import re | |
| import unicodedata | |
| from collections import Counter, defaultdict | |
| from functools import lru_cache | |
| from pathlib import Path | |
| from typing import Any | |
| from urllib.parse import urlsplit | |
| try: | |
| from .common import read_jsonl, write_jsonl | |
| from .corpus_db import connect, open_document, search | |
| except ImportError: # direct script execution | |
| from common import read_jsonl, write_jsonl | |
| from corpus_db import connect, open_document, search | |
| BENCHMARK_NAME = "deepresearch9k-medium-v1" | |
| DEFAULT_SEED = 20260809 | |
| AGENT_VISIBLE_K = 12 | |
| # Exact quotas keyed by (difficulty, teacher_correct, retrieval bucket). The | |
| # source has only five D2/teacher-failure questions whose answer is absent from | |
| # the original-query top 20 before stricter filtering, so forcing every cell | |
| # to be 50/50 is impossible. These quotas retain exact global 128/128 teacher | |
| # balance and the desired difficulty/bucket marginals without oversampling a | |
| # nonexistent cell. | |
| CELL_QUOTAS = { | |
| (1, False, "visible"): 24, | |
| (1, True, "visible"): 8, | |
| (1, False, "open"): 22, | |
| (1, True, "open"): 6, | |
| (1, False, "reformulate"): 2, | |
| (1, True, "reformulate"): 2, | |
| (2, False, "visible"): 20, | |
| (2, True, "visible"): 36, | |
| (2, False, "open"): 18, | |
| (2, True, "open"): 46, | |
| (2, False, "reformulate"): 2, | |
| (2, True, "reformulate"): 6, | |
| (3, False, "visible"): 4, | |
| (3, True, "visible"): 4, | |
| (3, False, "open"): 12, | |
| (3, True, "open"): 8, | |
| (3, False, "reformulate"): 24, | |
| (3, True, "reformulate"): 12, | |
| } | |
| SUSPICIOUS_URL_MARKERS = ( | |
| "huggingface.co/datasets", | |
| "honestybench", | |
| "halueval", | |
| "qapairs", | |
| "musique", | |
| "hotpotqa", | |
| "hotpot_qa", | |
| "triviaqa", | |
| "natural_questions", | |
| "strategyqa", | |
| "2wikimultihopqa", | |
| ) | |
| SHORT_COMMON_ANSWERS = { | |
| "earth", | |
| "false", | |
| "home", | |
| "magazine", | |
| "no", | |
| "plants", | |
| "rock", | |
| "true", | |
| "yes", | |
| } | |
| def normalize(text: str) -> str: | |
| decomposed = unicodedata.normalize("NFKD", text or "") | |
| without_marks = "".join( | |
| character for character in decomposed if not unicodedata.combining(character) | |
| ) | |
| return re.sub(r"[^\w]+", " ", without_marks.casefold(), flags=re.UNICODE).strip() | |
| def contains_answer(text: str, normalized_answer: str) -> bool: | |
| return f" {normalized_answer} " in f" {normalize(text)} " | |
| def answer_is_usable(answer: str) -> bool: | |
| normalized = normalize(answer) | |
| compact = normalized.replace(" ", "") | |
| if not normalized or normalized in SHORT_COMMON_ANSWERS or "<q1>" in answer: | |
| return False | |
| if len(compact) < 4 or len(answer) > 120: | |
| return False | |
| # Very short single alphabetic tokens are especially prone to incidental | |
| # matches in long pages. Four-digit years remain useful. | |
| if " " not in normalized and normalized.isalpha() and len(normalized) < 6: | |
| return False | |
| return True | |
| def sha256(path: Path) -> str: | |
| digest = hashlib.sha256() | |
| with path.open("rb") as handle: | |
| for block in iter(lambda: handle.read(1024 * 1024), b""): | |
| digest.update(block) | |
| return digest.hexdigest() | |
| def url_is_suspicious(url: str) -> bool: | |
| lowered = url.casefold() | |
| if any(marker in lowered for marker in SUSPICIOUS_URL_MARKERS): | |
| return True | |
| path = urlsplit(lowered).path | |
| return path.endswith((".jsonl", ".parquet")) | |
| def find_blocked_documents(connection) -> tuple[set[str], list[dict[str, str]]]: | |
| blocked: set[str] = set() | |
| details = [] | |
| for row in connection.execute( | |
| "SELECT url_id, canonical_url, title, text FROM documents WHERE status='success'" | |
| ): | |
| reason = None | |
| if url_is_suspicious(row["canonical_url"]): | |
| reason = "url_marker" | |
| else: | |
| lowered = row["text"].casefold() | |
| question_fields = lowered.count('"question"') + lowered.count('"question":') | |
| answer_fields = lowered.count('"answer"') + lowered.count('"answer":') | |
| if question_fields >= 5 and answer_fields >= 5: | |
| reason = "repeated_structured_qa" | |
| if reason: | |
| blocked.add(row["url_id"]) | |
| details.append( | |
| { | |
| "docid": row["url_id"], | |
| "url": row["canonical_url"], | |
| "title": row["title"], | |
| "reason": reason, | |
| } | |
| ) | |
| return blocked, details | |
| def load_provenance(connection) -> dict[str, list[str]]: | |
| result: defaultdict[str, list[str]] = defaultdict(list) | |
| for row in connection.execute( | |
| """ | |
| SELECT q.qid, d.url_id | |
| FROM document_qids AS q JOIN documents AS d USING(url_id) | |
| WHERE d.status='success' | |
| """ | |
| ): | |
| result[row["qid"]].append(row["url_id"]) | |
| return dict(result) | |
| def target_cells() -> dict[tuple[int, bool, str], int]: | |
| return dict(CELL_QUOTAS) | |
| def main() -> None: | |
| parser = argparse.ArgumentParser(description=__doc__) | |
| parser.add_argument("--database", type=Path, required=True) | |
| parser.add_argument( | |
| "--database-label", | |
| type=Path, | |
| help="persistent source path recorded when --database is a staged copy", | |
| ) | |
| parser.add_argument("--data", type=Path, required=True) | |
| parser.add_argument("--coverage", type=Path, required=True) | |
| parser.add_argument("--output-dir", type=Path, required=True) | |
| parser.add_argument("--seed", type=int, default=DEFAULT_SEED) | |
| args = parser.parse_args() | |
| records = read_jsonl(args.data) | |
| coverage = {row["qid"]: row for row in read_jsonl(args.coverage)} | |
| connection = connect(args.database, readonly=True) | |
| blocked_docids, blocked_details = find_blocked_documents(connection) | |
| provenance = load_provenance(connection) | |
| def document(docid: str) -> dict[str, Any] | None: | |
| return open_document(connection, docid=docid) | |
| candidates = [] | |
| rejected = Counter() | |
| for record in records: | |
| metadata = record.get("metadata") or {} | |
| qid = metadata.get("manifest_qid") or metadata.get("qid") | |
| audit = coverage.get(qid) | |
| answer = metadata.get("answer") or record.get("label", "") | |
| if audit is None or not audit.get("answer_in_fetched_provenance"): | |
| rejected["audit_no_provenance_answer"] += 1 | |
| continue | |
| if not answer_is_usable(answer): | |
| rejected["unusable_answer"] += 1 | |
| continue | |
| candidates.append(record) | |
| rng = random.Random(args.seed) | |
| rng.shuffle(candidates) | |
| coarse_base_counts = Counter( | |
| (int(record["metadata"]["difficulty"]), bool(record["metadata"]["teacher_correct"])) | |
| for record in candidates | |
| ) | |
| # Stable sort after shuffling: prioritize rare strata while preserving a | |
| # seeded random order within each stratum. This changes no eligibility or | |
| # quota; it avoids thousands of unnecessary FTS queries while waiting for | |
| # a rare D2/teacher-failure row to appear in a global random stream. | |
| candidates.sort( | |
| key=lambda record: coarse_base_counts[ | |
| ( | |
| int(record["metadata"]["difficulty"]), | |
| bool(record["metadata"]["teacher_correct"]), | |
| ) | |
| ] | |
| ) | |
| quotas = target_cells() | |
| selected_by_cell: defaultdict[tuple[int, bool, str], list[dict[str, Any]]] = defaultdict(list) | |
| scanned = 0 | |
| for record in candidates: | |
| if all(len(selected_by_cell[cell]) >= quota for cell, quota in quotas.items()): | |
| break | |
| scanned += 1 | |
| metadata = record["metadata"] | |
| qid = metadata.get("manifest_qid") or metadata["qid"] | |
| audit = coverage[qid] | |
| difficulty = int(metadata["difficulty"]) | |
| teacher_correct = bool(metadata["teacher_correct"]) | |
| base_cells = [ | |
| (difficulty, teacher_correct, bucket) | |
| for bucket in ("visible", "open", "reformulate") | |
| ] | |
| if all(len(selected_by_cell[cell]) >= quotas[cell] for cell in base_cells): | |
| rejected[f"base_quota_full:{difficulty}/{teacher_correct}"] += 1 | |
| continue | |
| # The earlier audit used a superset of this benchmark's visible | |
| # results (top 20, before blocking QA dumps). A miss there is | |
| # guaranteed to remain a reformulation case here and need not repeat | |
| # an expensive FTS query. | |
| audit_retrieval_miss = not bool(audit["answer_in_question_search_top_20"]) | |
| reformulate_cell = (difficulty, teacher_correct, "reformulate") | |
| if ( | |
| audit_retrieval_miss | |
| and len(selected_by_cell[reformulate_cell]) >= quotas[reformulate_cell] | |
| ): | |
| rejected[f"reformulate_quota_full:{difficulty}/{teacher_correct}"] += 1 | |
| continue | |
| answer = metadata.get("answer") or record.get("label", "") | |
| normalized_answer = normalize(answer) | |
| clean_provenance_hits = [] | |
| for docid in provenance.get(qid, []): | |
| if docid in blocked_docids: | |
| continue | |
| page = document(docid) | |
| if page and contains_answer(page["text"], normalized_answer): | |
| clean_provenance_hits.append(docid) | |
| if not clean_provenance_hits: | |
| rejected["no_clean_provenance_answer"] += 1 | |
| continue | |
| if audit_retrieval_miss: | |
| bucket = "reformulate" | |
| evidence_rank, evidence_row = None, None | |
| else: | |
| try: | |
| visible = search( | |
| connection, | |
| metadata["question"], | |
| AGENT_VISIBLE_K, | |
| excluded_docids=blocked_docids, | |
| ) | |
| except ValueError: | |
| rejected["unsearchable_question"] += 1 | |
| continue | |
| snippet_matches = [ | |
| (rank, row) | |
| for rank, row in enumerate(visible, 1) | |
| if contains_answer(row["text"], normalized_answer) | |
| ] | |
| full_matches = [] | |
| if not snippet_matches: | |
| for rank, row in enumerate(visible, 1): | |
| page = document(row["docid"]) | |
| if page and contains_answer(page["text"], normalized_answer): | |
| full_matches.append((rank, row)) | |
| if snippet_matches: | |
| bucket = "visible" | |
| evidence_rank, evidence_row = snippet_matches[0] | |
| elif full_matches: | |
| bucket = "open" | |
| evidence_rank, evidence_row = full_matches[0] | |
| else: | |
| bucket = "reformulate" | |
| evidence_rank, evidence_row = None, None | |
| cell = (int(metadata["difficulty"]), bool(metadata["teacher_correct"]), bucket) | |
| if cell not in quotas or len(selected_by_cell[cell]) >= quotas[cell]: | |
| rejected[f"quota_full:{cell}"] += 1 | |
| continue | |
| enriched = json.loads(json.dumps(record, ensure_ascii=False)) | |
| enriched["metadata"]["benchmark"] = { | |
| "name": BENCHMARK_NAME, | |
| "selection_bucket": bucket, | |
| "clean_provenance_answer_docids": sorted(clean_provenance_hits), | |
| "original_query_evidence_rank": evidence_rank, | |
| "original_query_evidence_docid": evidence_row["docid"] if evidence_row else None, | |
| } | |
| selected_by_cell[cell].append(enriched) | |
| if len(selected_by_cell[cell]) == quotas[cell] or scanned % 100 == 0: | |
| print( | |
| f"scanned={scanned} selected={sum(map(len, selected_by_cell.values()))} " | |
| f"filled={sum(len(selected_by_cell[c]) >= q for c, q in quotas.items())}/{len(quotas)}", | |
| flush=True, | |
| ) | |
| missing = { | |
| str(cell): quota - len(selected_by_cell[cell]) | |
| for cell, quota in quotas.items() | |
| if len(selected_by_cell[cell]) < quota | |
| } | |
| if missing: | |
| raise RuntimeError(f"could not fill benchmark quotas after scanning {scanned}: {missing}") | |
| selected = [row for cell in sorted(selected_by_cell, key=str) for row in selected_by_cell[cell]] | |
| rng.shuffle(selected) | |
| for index, row in enumerate(selected): | |
| row["metadata"]["benchmark"]["index"] = index | |
| args.output_dir.mkdir(parents=True, exist_ok=True) | |
| questions_path = args.output_dir / "questions.jsonl" | |
| blocked_docids_path = args.output_dir / "blocked_docids.txt" | |
| write_jsonl(questions_path, selected) | |
| write_jsonl(args.output_dir / "blocked_documents.jsonl", blocked_details) | |
| blocked_docids_path.write_text( | |
| "".join(f"{docid}\n" for docid in sorted(blocked_docids)) | |
| ) | |
| by_difficulty = Counter(row["metadata"]["difficulty"] for row in selected) | |
| by_teacher = Counter(str(row["metadata"]["teacher_correct"]).lower() for row in selected) | |
| by_bucket = Counter( | |
| row["metadata"]["benchmark"]["selection_bucket"] for row in selected | |
| ) | |
| summary = { | |
| "benchmark": BENCHMARK_NAME, | |
| "seed": args.seed, | |
| "questions": len(selected), | |
| "source_data": str(args.data), | |
| "source_coverage": str(args.coverage), | |
| "database": str(args.database_label or args.database), | |
| "database_sha256": sha256(args.database), | |
| "questions_sha256": sha256(questions_path), | |
| "blocked_docids_sha256": sha256(blocked_docids_path), | |
| "search_k": AGENT_VISIBLE_K, | |
| "agent_visible_k": AGENT_VISIBLE_K, | |
| "blocked_documents": len(blocked_docids), | |
| "candidates_after_coarse_filter": len(candidates), | |
| "coarse_candidates_by_difficulty_teacher": { | |
| f"D{difficulty}/teacher_{str(teacher).lower()}": count | |
| for (difficulty, teacher), count in sorted(coarse_base_counts.items()) | |
| }, | |
| "candidates_scanned": scanned, | |
| "by_difficulty": dict(sorted(by_difficulty.items())), | |
| "by_teacher_correct": dict(sorted(by_teacher.items())), | |
| "by_selection_bucket": dict(sorted(by_bucket.items())), | |
| "rejected": dict(rejected.most_common()), | |
| "selection_note": ( | |
| "Evidence-conditioned diagnostic; model outputs were not used for selection. " | |
| "Not a clean held-out estimate because train questions and train-trajectory provenance are allowed." | |
| ), | |
| } | |
| (args.output_dir / "summary.json").write_text( | |
| json.dumps(summary, ensure_ascii=False, indent=2, sort_keys=True) + "\n" | |
| ) | |
| connection.close() | |
| print(json.dumps(summary, ensure_ascii=False, sort_keys=True)) | |
| if __name__ == "__main__": | |
| main() | |