IOM / scripts /score_independent_eval.py
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#!/usr/bin/env python3
"""Scoring post-hoc de evaluación independiente (capa C).
Formato oficial de anotaciones (annotations_template.json):
{
"annotators": ["A1", "A2", "A3"],
"status": "pending_human_collection" | "complete",
"items": [
{
"id": "NR01",
"annotations": {"A1": "none" | null, ...},
"free_text": {"A1": "...", ...}
},
...
]
}
Reglas estadísticas:
- null / ausente ≠ etiqueta "unsure".
- Fleiss' kappa exige el **mismo conjunto de anotadores** con respuesta
no nula en **todos** los ítems incluidos (k fijo). No se trunca.
- Si un ítem tiene un subconjunto distinto de respondentes, se excluye
del kappa y se reporta en incomplete/heterogeneous.
- "unsure" es una respuesta legítima, no un relleno.
Uso:
python scripts/score_independent_eval.py
python scripts/score_independent_eval.py --annotations path/to/filled.json
python scripts/score_independent_eval.py --min-annotators 3
"""
from __future__ import annotations
import argparse
import json
import sys
from collections import Counter, defaultdict
from pathlib import Path
from typing import Any
ROOT = Path(__file__).resolve().parents[1]
EVAL_DIR = ROOT / "datasets" / "independent_eval"
VALID_LABELS = frozenset({"none", "mirrorOf", "creates", "unsure"})
def fleiss_kappa(ratings: list[list[str]], categories: list[str]) -> float:
"""Fleiss' kappa. ratings[i] = etiquetas de los k anotadores para el ítem i.
Todas las filas deben tener la misma longitud k ≥ 2.
"""
n_items = len(ratings)
if n_items == 0:
return float("nan")
n_raters = len(ratings[0])
if n_raters < 2:
return float("nan")
if any(len(r) != n_raters for r in ratings):
raise ValueError("Todas las filas de ratings deben tener la misma longitud")
cat_idx = {c: i for i, c in enumerate(categories)}
table = []
for row in ratings:
counts = [0] * len(categories)
for lab in row:
if lab not in cat_idx:
raise ValueError(f"Etiqueta fuera de categorías: {lab!r}")
counts[cat_idx[lab]] += 1
table.append(counts)
P = []
for counts in table:
s = sum(c * (c - 1) for c in counts)
P.append(s / (n_raters * (n_raters - 1)))
P_bar = sum(P) / n_items
totals = [sum(table[i][j] for i in range(n_items)) for j in range(len(categories))]
p = [t / (n_items * n_raters) for t in totals]
P_e = sum(pj ** 2 for pj in p)
if abs(1 - P_e) < 1e-12:
return 1.0
return (P_bar - P_e) / (1 - P_e)
def parse_template_format(data: dict) -> tuple[list[str], dict[str, dict[str, str | None]]]:
"""Formato oficial: annotators=[ids], items=[{id, annotations: {A: label|null}}]."""
annotator_ids = list(data.get("annotators") or [])
if not annotator_ids:
raise ValueError("Campo 'annotators' vacío o ausente")
by_pair: dict[str, dict[str, str | None]] = {}
items = data.get("items")
if not isinstance(items, list):
raise ValueError("Campo 'items' debe ser una lista")
for item in items:
pid = item.get("id")
if not pid:
raise ValueError(f"Ítem sin id: {item!r}")
anns = item.get("annotations") or {}
if not isinstance(anns, dict):
raise ValueError(f"annotations de {pid} debe ser un objeto")
pair_map: dict[str, str | None] = {}
for aid in annotator_ids:
raw = anns.get(aid)
if raw is None:
pair_map[aid] = None
elif isinstance(raw, str) and raw.strip() == "":
pair_map[aid] = None
elif raw in VALID_LABELS:
pair_map[aid] = raw
else:
raise ValueError(
f"Etiqueta inválida en {pid}/{aid}: {raw!r}. "
f"Permitidas: {sorted(VALID_LABELS)} o null"
)
by_pair[pid] = pair_map
return annotator_ids, by_pair
def parse_legacy_formats(data: Any) -> tuple[list[str], dict[str, dict[str, str | None]]]:
by_pair: dict[str, dict[str, str | None]] = defaultdict(dict)
annotator_ids: list[str] = []
if isinstance(data, dict) and "annotators" in data:
anns = data["annotators"]
if isinstance(anns, list) and anns and isinstance(anns[0], dict) and "labels" in anns[0]:
for ann in anns:
aid = str(ann.get("id") or ann.get("name") or f"A{len(annotator_ids)+1}")
annotator_ids.append(aid)
for pair_id, label in (ann.get("labels") or {}).items():
by_pair[pair_id][aid] = label if label in VALID_LABELS else None
return annotator_ids, dict(by_pair)
if isinstance(data, list):
aids_set: set[str] = set()
for item in data:
pid = item.get("id") or item.get("pair_id")
aid = str(item.get("annotator") or "A1")
lab = item.get("label") or item.get("annotation")
if not pid:
continue
aids_set.add(aid)
by_pair[pid][aid] = lab if lab in VALID_LABELS else None
return sorted(aids_set), dict(by_pair)
raise ValueError(
"Formato de anotaciones no reconocido. "
"Usa el formato de annotations_template.json."
)
def load_annotations(path: Path) -> tuple[list[str], dict[str, dict[str, str | None]], dict]:
data = json.loads(path.read_text(encoding="utf-8"))
meta = {
"status": data.get("status") if isinstance(data, dict) else None,
"description": data.get("description") if isinstance(data, dict) else None,
"evaluation_mode": data.get("evaluation_mode") if isinstance(data, dict) else None,
}
if isinstance(data, dict) and isinstance(data.get("items"), list):
annotator_ids, by_pair = parse_template_format(data)
else:
annotator_ids, by_pair = parse_legacy_formats(data)
return annotator_ids, by_pair, meta
def load_rule_reference() -> dict[str, str]:
ref_path = EVAL_DIR / "rule_reference.json"
if not ref_path.is_file():
return {}
raw = json.loads(ref_path.read_text(encoding="utf-8"))
if isinstance(raw, list):
return {item["id"]: item.get("rule_label") for item in raw if "id" in item}
if isinstance(raw, dict):
out = {}
for k, v in raw.items():
if k in ("labels",):
continue
if isinstance(v, dict):
out[k] = v.get("rule_label")
elif isinstance(v, str):
out[k] = v
if "labels" in raw and isinstance(raw["labels"], dict):
out.update(raw["labels"])
return out
return {}
def main() -> int:
parser = argparse.ArgumentParser(
description="Scoring de evaluación independiente (capa C)"
)
parser.add_argument(
"--annotations",
type=Path,
default=EVAL_DIR / "annotations.json",
help="JSON de anotaciones (plantilla o rellenado)",
)
parser.add_argument(
"--min-annotators",
type=int,
default=3,
help="Número exacto de anotadores con respuesta no nula requerido por ítem (default 3)",
)
args = parser.parse_args()
if not args.annotations.is_file():
# fallback a plantilla
alt = EVAL_DIR / "annotations_template.json"
if alt.is_file():
args.annotations = alt
else:
print(f"ERROR: no se encontró {args.annotations}", file=sys.stderr)
return 1
try:
annotator_ids, by_pair, meta = load_annotations(args.annotations)
except (ValueError, json.JSONDecodeError) as exc:
print(f"ERROR de formato: {exc}", file=sys.stderr)
return 1
k_required = args.min_annotators
if k_required < 2:
print("ERROR: --min-annotators debe ser ≥ 2", file=sys.stderr)
return 1
incomplete_pairs: dict[str, dict] = {}
respondent_sets: dict[str, tuple[str, ...]] = {}
labels_by_pair_ordered: dict[str, list[str]] = {}
unsure_counts: Counter = Counter()
present_counts: Counter = Counter()
for pid, ann_map in by_pair.items():
respondents = []
labels_ordered = []
missing = []
for aid in annotator_ids:
lab = ann_map.get(aid)
if lab is None:
missing.append(aid)
else:
respondents.append(aid)
labels_ordered.append(lab)
present_counts[lab] += 1
if lab == "unsure":
unsure_counts[pid] += 1
if len(respondents) == k_required:
respondent_sets[pid] = tuple(respondents)
labels_by_pair_ordered[pid] = labels_ordered
else:
incomplete_pairs[pid] = {
"n_present": len(respondents),
"n_missing": len(missing),
"missing_annotators": missing,
"present_annotators": respondents,
"present_labels": labels_ordered,
"reason": (
f"se requieren exactamente {k_required} respuestas no nulas; "
f"hay {len(respondents)}"
),
}
status = meta.get("status") or "unknown"
n_total = len(by_pair)
by_respondent_set: dict[tuple[str, ...], list[str]] = defaultdict(list)
for pid, rset in respondent_sets.items():
by_respondent_set[rset].append(pid)
kappa_eligible_ids: list[str] = []
kappa_annotators: tuple[str, ...] | None = None
heterogeneous: dict[str, dict] = {}
if by_respondent_set:
best_set = max(
by_respondent_set.keys(),
key=lambda s: (len(by_respondent_set[s]), s),
)
kappa_eligible_ids = sorted(by_respondent_set[best_set])
kappa_annotators = best_set
for rset, pids in by_respondent_set.items():
if rset == best_set:
continue
for pid in pids:
heterogeneous[pid] = {
"respondents": list(rset),
"n_present": len(rset),
"reason": (
"conjunto de anotadores distinto al usado para kappa "
f"({list(best_set)}); no se trunca ni se mezcla"
),
"present_labels": labels_by_pair_ordered[pid],
}
n_kappa = len(kappa_eligible_ids)
n_incomplete = len(incomplete_pairs)
n_heterogeneous = len(heterogeneous)
if n_kappa == 0:
report = {
"status": status,
"evaluation_mode": meta.get("evaluation_mode"),
"n_pairs_total": n_total,
"n_pairs_in_kappa": 0,
"n_pairs_incomplete": n_incomplete,
"n_pairs_heterogeneous_respondent_set": n_heterogeneous,
"min_annotators_required": k_required,
"kappa_annotators": None,
"fleiss_kappa": None,
"majority_labels": {},
"posthoc_agreement_with_rule_reference": None,
"incomplete_detail": incomplete_pairs,
"heterogeneous_detail": heterogeneous,
"note": (
f"Sin ítems con exactamente {k_required} respuestas no nulas "
"del mismo conjunto de anotadores. No se trunca. "
"null/ausente ≠ 'unsure'. Protocolo listo; esperando recolección."
),
}
out = ROOT / "experiments" / "results" / "independent_eval_scores.json"
out.parent.mkdir(parents=True, exist_ok=True)
out.write_text(json.dumps(report, ensure_ascii=False, indent=2) + "\n", encoding="utf-8")
print(json.dumps(report, ensure_ascii=False, indent=2))
print(f"Escrito: {out}")
return 0
assert kappa_annotators is not None
k = len(kappa_annotators)
categories = ["none", "mirrorOf", "creates", "unsure"]
ratings = [labels_by_pair_ordered[pid] for pid in kappa_eligible_ids]
if any(len(r) != k for r in ratings):
print(
"ERROR interno: longitudes inconsistentes tras filtrado; no se calcula kappa.",
file=sys.stderr,
)
return 1
kappa = fleiss_kappa(ratings, categories)
majority: dict[str, str] = {}
unanimous = 0
for pid in kappa_eligible_ids:
labs = labels_by_pair_ordered[pid]
cnt = Counter(labs)
maj_lab, maj_n = cnt.most_common(1)[0]
majority[pid] = maj_lab
if maj_n == len(labs):
unanimous += 1
majority_all = dict(majority)
for pid, labs in labels_by_pair_ordered.items():
if pid not in majority_all and labs:
majority_all[pid] = Counter(labs).most_common(1)[0][0]
rule_ref = load_rule_reference()
comparable = {
pid: maj
for pid, maj in majority.items()
if rule_ref.get(pid) and rule_ref[pid] not in (None, "unspecified")
}
agreement_with_rules = None
if comparable:
matched = sum(1 for pid, maj in comparable.items() if rule_ref[pid] == maj)
agreement_with_rules = round(matched / len(comparable), 4)
report = {
"status": status,
"evaluation_mode": meta.get("evaluation_mode"),
"n_pairs_total": n_total,
"n_pairs_in_kappa": n_kappa,
"n_pairs_incomplete": n_incomplete,
"n_pairs_heterogeneous_respondent_set": n_heterogeneous,
"min_annotators_required": k_required,
"kappa_annotators": list(kappa_annotators),
"n_annotators_per_kappa_item": k,
"fleiss_kappa": None if (isinstance(kappa, float) and kappa != kappa) else round(kappa, 4),
"unanimous_fraction": round(unanimous / n_kappa, 4) if n_kappa else None,
"majority_labels_in_kappa": majority,
"majority_labels_all_with_any_response": majority_all,
"label_distribution_present": dict(present_counts),
"unsure_count_by_pair": dict(unsure_counts),
"posthoc_agreement_with_rule_reference": agreement_with_rules,
"n_posthoc_comparable": len(comparable),
"incomplete_detail": incomplete_pairs if incomplete_pairs else {},
"heterogeneous_detail": heterogeneous if heterogeneous else {},
"policy": (
"Fleiss' kappa solo sobre ítems con exactamente k anotadores no nulos "
"y el mismo conjunto de respondentes. No se trunca ni se rellena. "
"null ≠ unsure."
),
"note": (
"Fleiss' kappa y mayoría (sobre el panel kappa) son el objetivo primario. "
"posthoc_agreement_with_rule_reference excluye unspecified y es solo post-hoc."
),
}
out = ROOT / "experiments" / "results" / "independent_eval_scores.json"
out.parent.mkdir(parents=True, exist_ok=True)
out.write_text(json.dumps(report, ensure_ascii=False, indent=2) + "\n", encoding="utf-8")
print(json.dumps(report, ensure_ascii=False, indent=2))
print(f"Escrito: {out}")
return 0
if __name__ == "__main__":
raise SystemExit(main())