cactus_bundle00000_intra_mcmrsimulator: the intra-axonal pool of bundle 00000 walked by MCMRSimulator 1.1, strand by strand, as a replay pack (the three-engine comparison of the replayable-MC paper)
Browse files- .gitattributes +1 -0
- README.md +3 -7
- manifest.json +214 -1
- packs/cactus_bundle00000_intra_mcmrsimulator.rpk +3 -0
.gitattributes
CHANGED
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@@ -61,3 +61,4 @@ saved_model/**/* filter=lfs diff=lfs merge=lfs -text
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packs/single_bundle_100ms_xframe.rpk filter=lfs diff=lfs merge=lfs -text
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packs/swoop_1s_c3_seg125ms.rpk filter=lfs diff=lfs merge=lfs -text
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packs/single_bundle_1s_c3_seg125ms.rpk filter=lfs diff=lfs merge=lfs -text
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packs/single_bundle_100ms_xframe.rpk filter=lfs diff=lfs merge=lfs -text
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packs/swoop_1s_c3_seg125ms.rpk filter=lfs diff=lfs merge=lfs -text
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| 63 |
packs/single_bundle_1s_c3_seg125ms.rpk filter=lfs diff=lfs merge=lfs -text
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+
packs/cactus_bundle00000_intra_mcmrsimulator.rpk filter=lfs diff=lfs merge=lfs -text
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README.md
CHANGED
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---
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-
license:
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- cc-by-nc-sa-4.0
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-
- other
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pretty_name: cactus-axons
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---
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@@ -27,11 +25,9 @@ Replay packs (`.rpk`) built with `dmipy_sim`: one converged Monte-Carlo walk eac
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| id | duration | walkers | bands | channels | floor | size | commit | path |
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|---|---|---|---|---|---|---|---|---|
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| `cactus/single-bundle-1s-c3-seg125ms` | 1000 ms (8 × 125 ms, 472.0 MB/window) | 100000 | 320 | positions, boundary_local_time, compartment, susceptibility_grid, susceptibility_path | 0.0266 | 3.8 GB | — | `packs/single_bundle_1s_c3_seg125ms.rpk` |
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## Citation
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* Villarreal-Haro et al., CACTUS; dmipy-sim#285, #528
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## Licence
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The packs are distributed under `CC-BY-NC-SA-4.0 OR LicenseRef-Commercial` (the full terms: https://huggingface.co/datasets/SubstrateCommons/cactus-axons/blob/main/LICENSING.md). The source geometry of each pack keeps its own licence, recorded in the pack's `license` field: cc-by-4.0; the format never relicenses a source.
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---
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license: cc-by-4.0
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pretty_name: cactus-axons
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---
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| id | duration | walkers | bands | channels | floor | size | commit | path |
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|---|---|---|---|---|---|---|---|---|
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| `cactus/single-bundle-1s-c3-seg125ms` | 1000 ms (8 × 125 ms, 472.0 MB/window) | 100000 | 320 | positions, boundary_local_time, compartment, susceptibility_grid, susceptibility_path | 0.0266 | 3.8 GB | — | `packs/single_bundle_1s_c3_seg125ms.rpk` |
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+
| `cactus/bundle00000-intra-k184/mcmrsimulator` | 100 ms | 40678 | 88 | positions, compartment | 0.00919 | 44.7 MB | built 0267d5ee, published 013afa3d | `packs/cactus_bundle00000_intra_mcmrsimulator.rpk` |
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## Citation
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* Villarreal-Haro et al. 2023, CACTUS (https://github.com/Juanitovh/CACTUS); walk: Cottaar M. et al. (2026) MCMRSimulator.jl, MCMRSimulator.jl 1.1.0
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* Villarreal-Haro et al., CACTUS; dmipy-sim#285, #528
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manifest.json
CHANGED
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@@ -47,6 +47,219 @@
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"segment_bytes": 472016640,
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"pack_license": "CC-BY-NC-SA-4.0 OR LicenseRef-Commercial",
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"pack_license_url": "https://huggingface.co/datasets/SubstrateCommons/cactus-axons/blob/main/LICENSING.md"
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| 50 |
}
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| 51 |
],
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| 52 |
"substrate": {
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@@ -84,4 +297,4 @@
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| 84 |
}
|
| 85 |
]
|
| 86 |
}
|
| 87 |
-
}
|
|
|
|
| 47 |
"segment_bytes": 472016640,
|
| 48 |
"pack_license": "CC-BY-NC-SA-4.0 OR LicenseRef-Commercial",
|
| 49 |
"pack_license_url": "https://huggingface.co/datasets/SubstrateCommons/cactus-axons/blob/main/LICENSING.md"
|
| 50 |
+
},
|
| 51 |
+
{
|
| 52 |
+
"id": "cactus/bundle00000-intra-k184/mcmrsimulator",
|
| 53 |
+
"path": "packs/cactus_bundle00000_intra_mcmrsimulator.rpk",
|
| 54 |
+
"sha256": "8cbd9b256de399ae7c313c202cce01b0422b4d8063dc51d63a572be48ea88b62",
|
| 55 |
+
"bytes": 44677062,
|
| 56 |
+
"n_walkers": 40678,
|
| 57 |
+
"T_max": 0.1,
|
| 58 |
+
"dt_traj": 3.6845983787767136e-05,
|
| 59 |
+
"K": 88,
|
| 60 |
+
"method": "bridge_dst",
|
| 61 |
+
"temporal_bandwidth_hz": 440.0,
|
| 62 |
+
"channels": [
|
| 63 |
+
"positions",
|
| 64 |
+
"compartment"
|
| 65 |
+
],
|
| 66 |
+
"floor_max": 0.00919317,
|
| 67 |
+
"err_max": 0.00014954,
|
| 68 |
+
"within_2x_floor": true,
|
| 69 |
+
"built_commit": "0267d5ee9ce97fb8be6e0e9e304f3d8dcf9ed6f8",
|
| 70 |
+
"published_commit": "013afa3de5fe46a0b687390700e6d514499ee574",
|
| 71 |
+
"license": "CC-BY-4.0",
|
| 72 |
+
"citation": "Villarreal-Haro et al. 2023, CACTUS (https://github.com/Juanitovh/CACTUS); walk: Cottaar M. et al. (2026) MCMRSimulator.jl, MCMRSimulator.jl 1.1.0",
|
| 73 |
+
"substrate": "cactus/cactus_bundle_00000/intra-k184",
|
| 74 |
+
"segments": {
|
| 75 |
+
"n": 1,
|
| 76 |
+
"n_t": 2715,
|
| 77 |
+
"T": 0.1,
|
| 78 |
+
"walks": [
|
| 79 |
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{
|
| 80 |
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"first": 0,
|
| 81 |
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"last": 0,
|
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"seed": [
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}
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]
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}
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}
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| 264 |
],
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| 265 |
"substrate": {
|
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| 297 |
}
|
| 298 |
]
|
| 299 |
}
|
| 300 |
+
}
|
packs/cactus_bundle00000_intra_mcmrsimulator.rpk
ADDED
|
@@ -0,0 +1,3 @@
|
|
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|
|
|
|
|
|
| 1 |
+
version https://git-lfs.github.com/spec/v1
|
| 2 |
+
oid sha256:8cbd9b256de399ae7c313c202cce01b0422b4d8063dc51d63a572be48ea88b62
|
| 3 |
+
size 44677062
|