rfick commited on
Commit
274cd88
·
verified ·
1 Parent(s): e3c8419

tessera: packs/cylinder-r4p5um-T50ms.rpk (pack 903df1f9fa56)

Browse files
Files changed (4) hide show
  1. .gitattributes +1 -0
  2. README.md +2 -0
  3. manifest.json +56 -0
  4. packs/cylinder-r4p5um-T50ms.rpk +3 -0
.gitattributes CHANGED
@@ -61,3 +61,4 @@ saved_model/**/* filter=lfs diff=lfs merge=lfs -text
61
  windows-fixture.rpk filter=lfs diff=lfs merge=lfs -text
62
  packs/cylinder-r3um-T60ms.rpk filter=lfs diff=lfs merge=lfs -text
63
  packs/cylinder-r4um-T50ms.rpk filter=lfs diff=lfs merge=lfs -text
 
 
61
  windows-fixture.rpk filter=lfs diff=lfs merge=lfs -text
62
  packs/cylinder-r3um-T60ms.rpk filter=lfs diff=lfs merge=lfs -text
63
  packs/cylinder-r4um-T50ms.rpk filter=lfs diff=lfs merge=lfs -text
64
+ packs/cylinder-r4p5um-T50ms.rpk filter=lfs diff=lfs merge=lfs -text
README.md CHANGED
@@ -25,8 +25,10 @@ Replay packs (`.rpk`) built with `dmipy_sim`: one converged Monte-Carlo walk eac
25
  |---|---|---|---|---|---|---|---|---|
26
  | `cylinder-r3um-T60ms` | 60 ms | 80000 | 16 | positions, boundary_local_time, compartment | 0.018 | 19.6 MB | — | `packs/cylinder-r3um-T60ms.rpk` |
27
  | `cylinder-r4um-T50ms` | 50 ms | 60000 | 16 | positions, boundary_local_time, compartment | 0.0158 | 14.7 MB | — | `packs/cylinder-r4um-T50ms.rpk` |
 
28
 
29
  ## Citation
30
 
31
  * Fick R., dmrai-lab. tessera test fixture: impermeable 3 um cylinder, D 2e-9 m^2/s, 60 ms walk (dmipy-sim de8590b).
32
  * Fick R., dmrai-lab. tessera test fixture: impermeable 4 um cylinder, D 2e-9 m^2/s, 50 ms walk (dmipy-sim de8590b).
 
 
25
  |---|---|---|---|---|---|---|---|---|
26
  | `cylinder-r3um-T60ms` | 60 ms | 80000 | 16 | positions, boundary_local_time, compartment | 0.018 | 19.6 MB | — | `packs/cylinder-r3um-T60ms.rpk` |
27
  | `cylinder-r4um-T50ms` | 50 ms | 60000 | 16 | positions, boundary_local_time, compartment | 0.0158 | 14.7 MB | — | `packs/cylinder-r4um-T50ms.rpk` |
28
+ | `cylinder-r4p5um-T50ms` | 50 ms | 380000 | 16 | positions, boundary_local_time, compartment | 0.0199 | 93.1 MB | — | `packs/cylinder-r4p5um-T50ms.rpk` |
29
 
30
  ## Citation
31
 
32
  * Fick R., dmrai-lab. tessera test fixture: impermeable 3 um cylinder, D 2e-9 m^2/s, 60 ms walk (dmipy-sim de8590b).
33
  * Fick R., dmrai-lab. tessera test fixture: impermeable 4 um cylinder, D 2e-9 m^2/s, 50 ms walk (dmipy-sim de8590b).
34
+ * Fick R., dmrai-lab. tessera test fixture: impermeable 4.5 um cylinder, D 2e-9 m^2/s, 50 ms walk (dmipy-sim de8590b).
manifest.json CHANGED
@@ -81,6 +81,62 @@
81
  }
82
  ]
83
  }
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
84
  }
85
  ],
86
  "substrate": {
 
81
  }
82
  ]
83
  }
84
+ },
85
+ {
86
+ "id": "cylinder-r4p5um-T50ms",
87
+ "path": "packs/cylinder-r4p5um-T50ms.rpk",
88
+ "sha256": "d9ed8186849507af29e352893d6639683774fb43a75b443ed0ec55e391b64eeb",
89
+ "bytes": 93105760,
90
+ "n_walkers": 380000,
91
+ "T_max": 0.05,
92
+ "dt_traj": 5.733944954128441e-05,
93
+ "K": 16,
94
+ "method": "bridge_dst",
95
+ "temporal_bandwidth_hz": 160.0,
96
+ "channels": [
97
+ "positions",
98
+ "boundary_local_time",
99
+ "compartment"
100
+ ],
101
+ "floor_max": 0.0199439,
102
+ "err_max": 0.0160407,
103
+ "within_2x_floor": true,
104
+ "commit": null,
105
+ "license": "CC-BY-4.0",
106
+ "citation": "Fick R., dmrai-lab. tessera test fixture: impermeable 4.5 um cylinder, D 2e-9 m^2/s, 50 ms walk (dmipy-sim de8590b).",
107
+ "substrate": "analytic/cylinder",
108
+ "segments": {
109
+ "n": 1,
110
+ "n_t": 873,
111
+ "T": 0.05,
112
+ "walks": [
113
+ {
114
+ "first": 0,
115
+ "last": 0,
116
+ "seed": [
117
+ 403387750,
118
+ 357308311,
119
+ 721025631,
120
+ 902348199,
121
+ 687658134,
122
+ 955135668,
123
+ 1245304811,
124
+ 1311668267,
125
+ 198425938,
126
+ 1966790323,
127
+ 1274566502,
128
+ 764973078,
129
+ 1986017801,
130
+ 77243582,
131
+ 2111093426,
132
+ 514363648,
133
+ 69082423,
134
+ 1191393979,
135
+ 1427470866
136
+ ]
137
+ }
138
+ ]
139
+ }
140
  }
141
  ],
142
  "substrate": {
packs/cylinder-r4p5um-T50ms.rpk ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:d9ed8186849507af29e352893d6639683774fb43a75b443ed0ec55e391b64eeb
3
+ size 93105760