tessera: packs/cylinder-r4p5um-T50ms.rpk (pack 903df1f9fa56)
Browse files- .gitattributes +1 -0
- README.md +2 -0
- manifest.json +56 -0
- packs/cylinder-r4p5um-T50ms.rpk +3 -0
.gitattributes
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@@ -61,3 +61,4 @@ saved_model/**/* filter=lfs diff=lfs merge=lfs -text
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windows-fixture.rpk filter=lfs diff=lfs merge=lfs -text
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packs/cylinder-r3um-T60ms.rpk filter=lfs diff=lfs merge=lfs -text
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packs/cylinder-r4um-T50ms.rpk filter=lfs diff=lfs merge=lfs -text
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windows-fixture.rpk filter=lfs diff=lfs merge=lfs -text
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packs/cylinder-r3um-T60ms.rpk filter=lfs diff=lfs merge=lfs -text
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packs/cylinder-r4um-T50ms.rpk filter=lfs diff=lfs merge=lfs -text
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packs/cylinder-r4p5um-T50ms.rpk filter=lfs diff=lfs merge=lfs -text
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README.md
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@@ -25,8 +25,10 @@ Replay packs (`.rpk`) built with `dmipy_sim`: one converged Monte-Carlo walk eac
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| `cylinder-r3um-T60ms` | 60 ms | 80000 | 16 | positions, boundary_local_time, compartment | 0.018 | 19.6 MB | — | `packs/cylinder-r3um-T60ms.rpk` |
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| `cylinder-r4um-T50ms` | 50 ms | 60000 | 16 | positions, boundary_local_time, compartment | 0.0158 | 14.7 MB | — | `packs/cylinder-r4um-T50ms.rpk` |
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## Citation
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* Fick R., dmrai-lab. tessera test fixture: impermeable 3 um cylinder, D 2e-9 m^2/s, 60 ms walk (dmipy-sim de8590b).
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* Fick R., dmrai-lab. tessera test fixture: impermeable 4 um cylinder, D 2e-9 m^2/s, 50 ms walk (dmipy-sim de8590b).
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| `cylinder-r3um-T60ms` | 60 ms | 80000 | 16 | positions, boundary_local_time, compartment | 0.018 | 19.6 MB | — | `packs/cylinder-r3um-T60ms.rpk` |
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| `cylinder-r4um-T50ms` | 50 ms | 60000 | 16 | positions, boundary_local_time, compartment | 0.0158 | 14.7 MB | — | `packs/cylinder-r4um-T50ms.rpk` |
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| `cylinder-r4p5um-T50ms` | 50 ms | 380000 | 16 | positions, boundary_local_time, compartment | 0.0199 | 93.1 MB | — | `packs/cylinder-r4p5um-T50ms.rpk` |
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## Citation
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* Fick R., dmrai-lab. tessera test fixture: impermeable 3 um cylinder, D 2e-9 m^2/s, 60 ms walk (dmipy-sim de8590b).
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* Fick R., dmrai-lab. tessera test fixture: impermeable 4 um cylinder, D 2e-9 m^2/s, 50 ms walk (dmipy-sim de8590b).
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* Fick R., dmrai-lab. tessera test fixture: impermeable 4.5 um cylinder, D 2e-9 m^2/s, 50 ms walk (dmipy-sim de8590b).
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manifest.json
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@@ -81,6 +81,62 @@
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}
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]
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}
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}
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],
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"substrate": {
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}
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]
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}
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},
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{
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"id": "cylinder-r4p5um-T50ms",
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"path": "packs/cylinder-r4p5um-T50ms.rpk",
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"sha256": "d9ed8186849507af29e352893d6639683774fb43a75b443ed0ec55e391b64eeb",
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"bytes": 93105760,
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"n_walkers": 380000,
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"T_max": 0.05,
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"dt_traj": 5.733944954128441e-05,
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"K": 16,
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"method": "bridge_dst",
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"temporal_bandwidth_hz": 160.0,
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"channels": [
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"positions",
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"boundary_local_time",
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"compartment"
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],
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"floor_max": 0.0199439,
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"err_max": 0.0160407,
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"within_2x_floor": true,
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"commit": null,
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"license": "CC-BY-4.0",
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"citation": "Fick R., dmrai-lab. tessera test fixture: impermeable 4.5 um cylinder, D 2e-9 m^2/s, 50 ms walk (dmipy-sim de8590b).",
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"substrate": "analytic/cylinder",
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"segments": {
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"n": 1,
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"n_t": 873,
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"T": 0.05,
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"walks": [
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{
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"seed": [
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}
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}
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],
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"substrate": {
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packs/cylinder-r4p5um-T50ms.rpk
ADDED
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@@ -0,0 +1,3 @@
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version https://git-lfs.github.com/spec/v1
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oid sha256:d9ed8186849507af29e352893d6639683774fb43a75b443ed0ec55e391b64eeb
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size 93105760
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