Catalog esmc_300/pooled: 3,567,465 proteins
Browse files- README.md +1 -0
- catalog.json +68 -1
README.md
CHANGED
|
@@ -19,6 +19,7 @@ recomputed in new batches, equal bit for bit.
|
|
| 19 |
|
| 20 |
| store | model | kind | proteins | GiB | streams | profile | backbone | sequences |
|
| 21 |
|---|---|---|---:|---:|---|---|---|---|
|
|
|
|
| 22 |
| `esmc_300/token` | ESMC-300 | token | 330,783 | 588.7 | `final_hidden`, `layer_hidden`, `structural` | `embedding_profile_v3` | BF16 | [`7b488481`](https://huggingface.co/datasets/Synthyra/canonical_embedding_sequences/tree/7b488481b3ef65445ba0de762b393e56e471b881) `full` |
|
| 23 |
| `esmc_300_random/pooled` | ESMC-300 random init | pooled | 3,567,465 | 26.1 | `final_mean_var` | `embedding_profile_v3` | BF16 | [`7b488481`](https://huggingface.co/datasets/Synthyra/canonical_embedding_sequences/tree/7b488481b3ef65445ba0de762b393e56e471b881) |
|
| 24 |
| `esmc_300_random/token` | ESMC-300 random init | token | 330,783 | 519.4 | `final_hidden`, `layer_hidden` | `embedding_profile_v3` | BF16 | [`7b488481`](https://huggingface.co/datasets/Synthyra/canonical_embedding_sequences/tree/7b488481b3ef65445ba0de762b393e56e471b881) `full` |
|
|
|
|
| 19 |
|
| 20 |
| store | model | kind | proteins | GiB | streams | profile | backbone | sequences |
|
| 21 |
|---|---|---|---:|---:|---|---|---|---|
|
| 22 |
+
| `esmc_300/pooled` | ESMC-300 | pooled | 3,567,465 | 59.3 | `final_mean_var`, `layer_mean_var`, `structural_mean_var` | `embedding_profile_v3` | BF16 | [`7b488481`](https://huggingface.co/datasets/Synthyra/canonical_embedding_sequences/tree/7b488481b3ef65445ba0de762b393e56e471b881) |
|
| 23 |
| `esmc_300/token` | ESMC-300 | token | 330,783 | 588.7 | `final_hidden`, `layer_hidden`, `structural` | `embedding_profile_v3` | BF16 | [`7b488481`](https://huggingface.co/datasets/Synthyra/canonical_embedding_sequences/tree/7b488481b3ef65445ba0de762b393e56e471b881) `full` |
|
| 24 |
| `esmc_300_random/pooled` | ESMC-300 random init | pooled | 3,567,465 | 26.1 | `final_mean_var` | `embedding_profile_v3` | BF16 | [`7b488481`](https://huggingface.co/datasets/Synthyra/canonical_embedding_sequences/tree/7b488481b3ef65445ba0de762b393e56e471b881) |
|
| 25 |
| `esmc_300_random/token` | ESMC-300 random init | token | 330,783 | 519.4 | `final_hidden`, `layer_hidden` | `embedding_profile_v3` | BF16 | [`7b488481`](https://huggingface.co/datasets/Synthyra/canonical_embedding_sequences/tree/7b488481b3ef65445ba0de762b393e56e471b881) `full` |
|
catalog.json
CHANGED
|
@@ -2,6 +2,73 @@
|
|
| 2 |
"repository": "Synthyra/esmc_embeddings",
|
| 3 |
"schema": "embedding_catalog_v1",
|
| 4 |
"stores": {
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 5 |
"esmc_300/token": {
|
| 6 |
"base": "esmc_small",
|
| 7 |
"bytes": 632076499155,
|
|
@@ -264,5 +331,5 @@
|
|
| 264 |
"visibility": "public"
|
| 265 |
}
|
| 266 |
},
|
| 267 |
-
"updated_utc": "2026-10-
|
| 268 |
}
|
|
|
|
| 2 |
"repository": "Synthyra/esmc_embeddings",
|
| 3 |
"schema": "embedding_catalog_v1",
|
| 4 |
"stores": {
|
| 5 |
+
"esmc_300/pooled": {
|
| 6 |
+
"base": "esmc_small",
|
| 7 |
+
"bytes": 63667415503,
|
| 8 |
+
"files": 1209,
|
| 9 |
+
"hardware_class": {
|
| 10 |
+
"compute_capability": [
|
| 11 |
+
9,
|
| 12 |
+
0
|
| 13 |
+
],
|
| 14 |
+
"device_type": "cuda",
|
| 15 |
+
"id": "hopper_sm90_132",
|
| 16 |
+
"multiprocessors": 132
|
| 17 |
+
},
|
| 18 |
+
"index": {
|
| 19 |
+
"parts": "esmc_300/pooled/index/parts.parquet",
|
| 20 |
+
"rows": "esmc_300/pooled/index/rows.parquet"
|
| 21 |
+
},
|
| 22 |
+
"kind": "pooled",
|
| 23 |
+
"label": "ESMC-300",
|
| 24 |
+
"model": "esmc_300",
|
| 25 |
+
"model_state_sha256": "b9015823c410c978ffc568d27e056b08f4a4a8f1736aaf1589720451bb6dc233",
|
| 26 |
+
"path": "esmc_300/pooled",
|
| 27 |
+
"profile": {
|
| 28 |
+
"id": "embedding_profile_v3",
|
| 29 |
+
"sha256": "959709ca15c7f2714e97548a40910ff0bc29918d11c33f46ea4fb0341fafcaf1"
|
| 30 |
+
},
|
| 31 |
+
"proteins": 3567465,
|
| 32 |
+
"random_init": null,
|
| 33 |
+
"sequences": {
|
| 34 |
+
"file": "union_7b488481.parquet",
|
| 35 |
+
"keep_flags": [],
|
| 36 |
+
"proteins": 3567465,
|
| 37 |
+
"repository": "Synthyra/canonical_embedding_sequences",
|
| 38 |
+
"revision": "7b488481b3ef65445ba0de762b393e56e471b881",
|
| 39 |
+
"sha256": "a795299b7ed2609674221ba6c17e7785e7d6db442762365bcd8859050751dcd4"
|
| 40 |
+
},
|
| 41 |
+
"streams": {
|
| 42 |
+
"final_mean_var": {
|
| 43 |
+
"bytes": 27861835582,
|
| 44 |
+
"dtype": "float32",
|
| 45 |
+
"key": "dense_pooled__Synthyra--ESMplusplus_small__contract1__96171f4566e9de5f",
|
| 46 |
+
"layout": "dense",
|
| 47 |
+
"parts": 203,
|
| 48 |
+
"proteins": 3567465,
|
| 49 |
+
"width": 1920
|
| 50 |
+
},
|
| 51 |
+
"layer_mean_var": {
|
| 52 |
+
"bytes": 27861831422,
|
| 53 |
+
"dtype": "float32",
|
| 54 |
+
"key": "dense_pooled__Synthyra--ESMplusplus_small__contract1__27619a115b2e4941",
|
| 55 |
+
"layout": "dense",
|
| 56 |
+
"parts": 203,
|
| 57 |
+
"proteins": 3567465,
|
| 58 |
+
"width": 1920
|
| 59 |
+
},
|
| 60 |
+
"structural_mean_var": {
|
| 61 |
+
"bytes": 7769851306,
|
| 62 |
+
"dtype": "float32",
|
| 63 |
+
"key": "structural_pooled__Synthyra--ESMplusplus_small__contract1__d4a7eebabd881e6c",
|
| 64 |
+
"layout": "dense",
|
| 65 |
+
"parts": 189,
|
| 66 |
+
"proteins": 3567465,
|
| 67 |
+
"width": 512
|
| 68 |
+
}
|
| 69 |
+
},
|
| 70 |
+
"visibility": "public"
|
| 71 |
+
},
|
| 72 |
"esmc_300/token": {
|
| 73 |
"base": "esmc_small",
|
| 74 |
"bytes": 632076499155,
|
|
|
|
| 331 |
"visibility": "public"
|
| 332 |
}
|
| 333 |
},
|
| 334 |
+
"updated_utc": "2026-10-19T22:05:57+00:00"
|
| 335 |
}
|