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Catalog esmc_300/pooled: 3,567,465 proteins

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Files changed (2) hide show
  1. README.md +1 -0
  2. catalog.json +68 -1
README.md CHANGED
@@ -19,6 +19,7 @@ recomputed in new batches, equal bit for bit.
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  | store | model | kind | proteins | GiB | streams | profile | backbone | sequences |
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  |---|---|---|---:|---:|---|---|---|---|
 
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  | `esmc_300/token` | ESMC-300 | token | 330,783 | 588.7 | `final_hidden`, `layer_hidden`, `structural` | `embedding_profile_v3` | BF16 | [`7b488481`](https://huggingface.co/datasets/Synthyra/canonical_embedding_sequences/tree/7b488481b3ef65445ba0de762b393e56e471b881) `full` |
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  | `esmc_300_random/pooled` | ESMC-300 random init | pooled | 3,567,465 | 26.1 | `final_mean_var` | `embedding_profile_v3` | BF16 | [`7b488481`](https://huggingface.co/datasets/Synthyra/canonical_embedding_sequences/tree/7b488481b3ef65445ba0de762b393e56e471b881) |
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  | `esmc_300_random/token` | ESMC-300 random init | token | 330,783 | 519.4 | `final_hidden`, `layer_hidden` | `embedding_profile_v3` | BF16 | [`7b488481`](https://huggingface.co/datasets/Synthyra/canonical_embedding_sequences/tree/7b488481b3ef65445ba0de762b393e56e471b881) `full` |
 
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  | store | model | kind | proteins | GiB | streams | profile | backbone | sequences |
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  |---|---|---|---:|---:|---|---|---|---|
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+ | `esmc_300/pooled` | ESMC-300 | pooled | 3,567,465 | 59.3 | `final_mean_var`, `layer_mean_var`, `structural_mean_var` | `embedding_profile_v3` | BF16 | [`7b488481`](https://huggingface.co/datasets/Synthyra/canonical_embedding_sequences/tree/7b488481b3ef65445ba0de762b393e56e471b881) |
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  | `esmc_300/token` | ESMC-300 | token | 330,783 | 588.7 | `final_hidden`, `layer_hidden`, `structural` | `embedding_profile_v3` | BF16 | [`7b488481`](https://huggingface.co/datasets/Synthyra/canonical_embedding_sequences/tree/7b488481b3ef65445ba0de762b393e56e471b881) `full` |
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  | `esmc_300_random/pooled` | ESMC-300 random init | pooled | 3,567,465 | 26.1 | `final_mean_var` | `embedding_profile_v3` | BF16 | [`7b488481`](https://huggingface.co/datasets/Synthyra/canonical_embedding_sequences/tree/7b488481b3ef65445ba0de762b393e56e471b881) |
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  | `esmc_300_random/token` | ESMC-300 random init | token | 330,783 | 519.4 | `final_hidden`, `layer_hidden` | `embedding_profile_v3` | BF16 | [`7b488481`](https://huggingface.co/datasets/Synthyra/canonical_embedding_sequences/tree/7b488481b3ef65445ba0de762b393e56e471b881) `full` |
catalog.json CHANGED
@@ -2,6 +2,73 @@
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  "repository": "Synthyra/esmc_embeddings",
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  "schema": "embedding_catalog_v1",
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  "stores": {
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
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  "esmc_300/token": {
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  "base": "esmc_small",
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  "bytes": 632076499155,
@@ -264,5 +331,5 @@
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  "visibility": "public"
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  }
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  },
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- "updated_utc": "2026-10-19T21:57:32+00:00"
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  }
 
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  "repository": "Synthyra/esmc_embeddings",
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  "schema": "embedding_catalog_v1",
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  "stores": {
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+ "esmc_300/pooled": {
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+ "base": "esmc_small",
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+ "bytes": 63667415503,
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+ "files": 1209,
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+ "hardware_class": {
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+ "compute_capability": [
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+ 9,
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+ 0
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+ ],
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+ "device_type": "cuda",
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+ "id": "hopper_sm90_132",
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+ "multiprocessors": 132
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+ },
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+ "index": {
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+ "parts": "esmc_300/pooled/index/parts.parquet",
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+ "rows": "esmc_300/pooled/index/rows.parquet"
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+ },
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+ "kind": "pooled",
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+ "label": "ESMC-300",
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+ "model": "esmc_300",
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+ "model_state_sha256": "b9015823c410c978ffc568d27e056b08f4a4a8f1736aaf1589720451bb6dc233",
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+ "path": "esmc_300/pooled",
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+ "profile": {
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+ "id": "embedding_profile_v3",
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+ "sha256": "959709ca15c7f2714e97548a40910ff0bc29918d11c33f46ea4fb0341fafcaf1"
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+ },
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+ "proteins": 3567465,
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+ "random_init": null,
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+ "sequences": {
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+ "file": "union_7b488481.parquet",
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+ "keep_flags": [],
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+ "proteins": 3567465,
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+ "repository": "Synthyra/canonical_embedding_sequences",
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+ "revision": "7b488481b3ef65445ba0de762b393e56e471b881",
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+ "sha256": "a795299b7ed2609674221ba6c17e7785e7d6db442762365bcd8859050751dcd4"
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+ },
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+ "streams": {
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+ "final_mean_var": {
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+ "bytes": 27861835582,
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+ "dtype": "float32",
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+ "key": "dense_pooled__Synthyra--ESMplusplus_small__contract1__96171f4566e9de5f",
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+ "layout": "dense",
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+ "parts": 203,
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+ "proteins": 3567465,
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+ "width": 1920
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+ },
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+ "layer_mean_var": {
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+ "bytes": 27861831422,
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+ "dtype": "float32",
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+ "key": "dense_pooled__Synthyra--ESMplusplus_small__contract1__27619a115b2e4941",
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+ "layout": "dense",
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+ "parts": 203,
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+ "proteins": 3567465,
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+ "width": 1920
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+ },
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+ "structural_mean_var": {
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+ "bytes": 7769851306,
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+ "dtype": "float32",
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+ "key": "structural_pooled__Synthyra--ESMplusplus_small__contract1__d4a7eebabd881e6c",
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+ "layout": "dense",
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+ "parts": 189,
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+ "proteins": 3567465,
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+ "width": 512
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+ }
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+ },
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+ "visibility": "public"
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+ },
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  "esmc_300/token": {
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  "base": "esmc_small",
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  "bytes": 632076499155,
 
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  "visibility": "public"
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  }
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  },
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+ "updated_utc": "2026-10-19T22:05:57+00:00"
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  }