File size: 40,101 Bytes
abc36e5 | 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100 101 102 103 104 105 106 107 108 109 110 111 112 113 114 115 116 117 118 119 120 121 122 123 124 125 126 127 128 129 130 131 132 133 134 135 136 137 138 139 140 141 142 143 144 145 146 147 148 149 150 151 152 153 154 155 156 157 158 159 160 161 162 163 164 165 166 167 168 169 170 171 172 173 174 175 176 177 178 179 180 181 182 183 184 185 186 187 188 189 190 191 192 193 194 195 196 197 198 199 200 201 202 203 204 205 206 207 208 209 210 211 212 213 214 215 216 217 218 219 220 221 222 223 224 225 226 227 228 229 230 231 232 233 234 235 236 237 238 239 240 241 242 243 244 245 246 247 248 249 250 251 252 253 254 255 256 257 258 259 260 261 262 263 264 265 266 267 268 269 270 271 272 273 274 275 276 277 278 279 280 281 282 283 284 285 286 287 288 289 290 291 292 293 294 295 296 297 298 299 300 301 302 303 304 305 306 307 308 309 310 311 312 313 314 315 316 317 318 319 320 321 322 323 324 325 326 327 328 329 330 331 332 333 334 335 336 337 338 339 340 341 342 343 344 345 346 347 348 349 350 351 352 353 354 355 356 357 358 359 360 361 362 363 364 365 366 367 368 369 370 371 372 373 374 375 376 377 378 379 380 381 382 383 384 385 386 387 388 389 390 391 392 393 394 395 396 397 398 399 400 401 402 403 404 405 406 407 408 409 410 411 412 413 414 415 416 417 418 419 420 421 422 423 424 425 426 427 428 429 430 431 432 433 434 435 436 437 438 439 440 441 442 443 444 445 446 447 448 449 450 451 452 453 454 455 456 457 458 459 460 461 462 463 464 465 466 467 468 469 470 471 472 473 474 475 476 477 478 479 480 481 482 483 484 485 486 487 488 489 490 491 492 493 494 495 496 497 498 499 500 501 502 503 504 505 506 | """Unqualified same-run 3D-water aspiration/dispense/rack motor candidate.
Advancement requires actual liquid inventory. No phase-based water creation,
object pose substitution, or automatic physics qualification is performed.
"""
from pathlib import Path
import sys,argparse,json,time,math
import numpy as np,mujoco,warp as wp
from scipy.spatial.transform import Rotation
sys.path.insert(0,str(Path(__file__).resolve().parents[1]))
from dropperlab.experimental_sph.warp_dfsph import WarpDFSPH
from dropperlab.experimental_sph.bulb_fem import Cavity
from dropperlab.experimental_sph.bulb_integrity import BulbIntegrity
from dropperlab.dual_policy import MotorController
from dropperlab.assets import ROOT
from dropperlab.experiment_recording import ExperimentRecorder
from dropperlab.particle_inventory import CavityInventory
from dropperlab.transfer_policy import TransferPolicy
from dropperlab.interval_state import IntervalState
from dropperlab.accepted_checkpoint import save_checkpoint,load_checkpoint
from dropperlab.grasp_support import GraspSupport
from dropperlab.grasp_geometry import GraspGeometry
p=argparse.ArgumentParser();p.add_argument('--source',type=Path,default=ROOT/'results/coupled_gpu_seed_smoke')
p.add_argument('--out',type=Path,required=True);p.add_argument('--duration',type=float,default=60.)
p.add_argument('--release-duration',type=float,default=.3);p.add_argument('--sigma',type=float,default=.072)
p.add_argument('--release-gap',type=float,default=.008)
p.add_argument('--fluid-dt',type=float,default=.0001)
p.add_argument('--adaptive-contact',action='store_true')
p.add_argument('--contact-predictor-recovery',action='store_true')
p.add_argument('--paired-world-contact',action='store_true')
p.add_argument('--record-water-interval',type=float,default=.02)
p.add_argument('--maximum-coupling-iterations',type=int,default=24)
p.add_argument('--resume',type=Path)
p.add_argument('--minimum-solid-dt',type=float,default=.0000125)
p.add_argument('--neighbor-cache',action='store_true')
p.add_argument('--kinematics-only-prediction',action='store_true')
p.add_argument('--adopt-native-result',action='store_true')
p.add_argument('--gas-volume-tolerance',type=float,default=1e-11)
p.add_argument('--grasp-feedback',action='store_true')
p.add_argument('--transport-grasp-minimum',type=float,default=.12)
p.add_argument('--bulb-center-z',type=float)
p.add_argument('--stem-preclose-gap',type=float,default=.014)
p.add_argument('--synchronized-motion',action='store_true')
p.add_argument('--recover-solid-dt',type=float,default=0.)
p.add_argument('--coupling-relaxation',type=float,default=1.)
p.add_argument('--coupling-tolerance',type=float,default=5e-9)
p.add_argument('--ccd-tolerance',type=float)
p.add_argument('--ccd-iterations',type=int)
p.add_argument('--independent-grasp-geometry',action='store_true')
p.add_argument('--immersion-depth',type=float,default=.005)
p.add_argument('--aspiration-timeout',type=float,default=12.)
p.add_argument('--stop-request',type=Path)
p.add_argument('--bimanual-stem-support',action='store_true')
p.add_argument('--rack-to-rack-v1',action='store_true',help='New empty-tools dual-rack initial preparation; never reinterpret an old continuation')
p.add_argument('--static-world-contact',action='store_true')
p.add_argument('--world-floor-z',type=float)
p.add_argument('--record-port-flux',action='store_true')
p.add_argument('--substep-port-flux',action='store_true')
p.add_argument('--continuous-glass-wall-table',type=Path)
p.add_argument('--continuous-glass-pressure-table',type=Path)
p.add_argument('--dispense-force-max',type=float,default=3.)
p.add_argument('--swept-water-contact',action='store_true')
p.add_argument('--continuous-floor-viscosity',action='store_true')
p.add_argument('--surface-model',choices=['pair','number_density_energy','number_density_implicit'],default='pair')
p.add_argument('--kernel-support',type=float,default=2.)
p.add_argument('--viscosity-kernel-support',type=float)
p.add_argument('--viscosity-regularization',type=float,default=.01)
p.add_argument('--mirror-no-slip',action='store_true')
p.add_argument('--wall-velocity-model',choices=['quadratic_mirror','adaptive_mirror'],default='quadratic_mirror')
p.add_argument('--pressure-complementarity',action='store_true')
p.add_argument('--pressure-tolerance',type=float,default=5e-5)
p.add_argument('--maximum-pressure-iterations',type=int,default=200)
p.add_argument('--number-density-area-scale',type=float,default=1.)
p.add_argument('--interface-kernel-support',type=float,default=3.)
p.add_argument('--discrete-interface-normalization',action='store_true')
p.add_argument('--interface-epsilon',type=float,default=.05)
a=p.parse_args();out=a.out.resolve();out.mkdir(parents=True,exist_ok=False);started=time.perf_counter()
if a.rack_to_rack_v1 and not a.bimanual_stem_support:raise ValueError('Dual-rack V1 requires bimanual support')
if not .007<=a.stem_preclose_gap<=.014:raise ValueError('Stem preclose outside reviewed clearance range')
if a.world_floor_z is not None and (not a.static_world_contact or not np.isfinite(a.world_floor_z)):raise ValueError('A finite world floor requires fixed-world fluid contact')
if a.continuous_floor_viscosity and a.world_floor_z is None:raise ValueError('Continuous floor viscosity requires the explicit physical floor')
if a.substep_port_flux and not a.record_port_flux:raise ValueError('Substep flux requires the accepted port-flux ledger')
model=mujoco.MjModel.from_binary_path(str(a.source/'solid/model.mjb'));data=mujoco.MjData(model)
if not 3.<=a.dispense_force_max<=4.:raise ValueError('Dispense effort must remain within the original 4N gripper rating')
if any(model.actuator('left_joint'+str(i)).forcerange[1]<a.dispense_force_max for i in (7,8)):raise ValueError('Requested effort exceeds source model rating')
if a.ccd_tolerance is not None:
if not 0<a.ccd_tolerance<=1e-6:raise ValueError('Invalid high-precision CCD tolerance')
model.opt.ccd_tolerance=a.ccd_tolerance
if a.ccd_iterations is not None:
if a.ccd_iterations<35:raise ValueError('CCD iteration limit may not be reduced')
model.opt.ccd_iterations=a.ccd_iterations
initial=np.load(a.source/'solid/initial_state.npz');data.qpos[:]=initial['qpos'];data.qvel[:]=initial['qvel']
robots=[MotorController(model,data,arm) for arm in ['left','right']]
for r in robots:r.reference=data.qpos[r.qids].copy();r.target=r.reference.copy();data.ctrl[r.uids]=r.reference;data.ctrl[r.gids]=0.;r.grip_reference[:]=0.;r.grip_speed_limit=.03
if a.rack_to_rack_v1 and not a.resume:
for r in robots:r.grip=.044;r.grip_reference[:]=.044;data.ctrl[r.gids]=.044
for actuator in robots[0].gids:model.actuator_forcerange[actuator]=[-3.,3.]
mujoco.mj_forward(model,data);cavity=Cavity(model,data);integrity=BulbIntegrity(cavity)
grasp_geometry=GraspGeometry(model,integrity) if a.independent_grasp_geometry else None
names=['Beaker','Dropper','Tube'];assets=['beaker','dropper_glass','open_original_tube'];meshes=[]
for asset in assets:
mesh=np.load(ROOT/f'assets/generated/{asset}.npz');meshes.append((mesh['vertices'].astype(np.float32),mesh['faces'].astype(np.int32)))
seed=np.load(a.source/'fluid/gpu_seed.npz');origin=seed['origin_world'];spacing=float(seed['spacing'])
if a.surface_model=='number_density_energy' and a.sigma>0 and a.fluid_dt>.25*np.sqrt(998.2*spacing**3/a.sigma):
raise ValueError('Explicit interface timestep exceeds the capillary stability bound')
water=WarpDFSPH(seed,meshes,sigma=a.sigma,cohesion_calibration=.2074,neighbor_cache=a.neighbor_cache,
surface_model=a.surface_model,kernel_support=a.kernel_support,viscosity_kernel_support=a.viscosity_kernel_support,
viscosity_regularization=a.viscosity_regularization,mirror_no_slip=a.mirror_no_slip,wall_velocity_model=a.wall_velocity_model,
pressure_complementarity=a.pressure_complementarity,pressure_tolerance=a.pressure_tolerance,
maximum_pressure_iterations=a.maximum_pressure_iterations,number_density_area_scale=a.number_density_area_scale,interface_kernel_support=a.interface_kernel_support,discrete_interface_normalization=a.discrete_interface_normalization,interface_epsilon=a.interface_epsilon)
if a.continuous_glass_wall_table:
from dropperlab.experimental_sph.continuous_wall_gpu import ContinuousGlassWall
water.continuous_glass_wall=ContinuousGlassWall(water,a.continuous_glass_wall_table)
if a.continuous_glass_pressure_table:
from dropperlab.experimental_sph.continuous_wall_pressure import ContinuousGlassPressure
water.continuous_glass_pressure=ContinuousGlassPressure(water,a.continuous_glass_pressure_table)
if a.swept_water_contact:
from dropperlab.experimental_sph.swept_water_contact import SweptWaterAudit
water.swept_water_audit=SweptWaterAudit(water)
water.port_flux=None
if a.record_port_flux:
from dropperlab.port_flux import PortFluxLedger
initial_water=np.asarray(seed['water']);beaker_local=(initial_water-seed['body_position'][0])@seed['body_rotation'][0]
initial_source=(np.linalg.norm(beaker_local[:,:2],axis=1)<=.032+1e-7)&(beaker_local[:,2]>=.002-1e-7)&(beaker_local[:,2]<=.065+1e-7)
if not initial_source.all():raise RuntimeError('Initial water source is not the physical beaker; source flux cannot be invented')
water.port_flux=PortFluxLedger(water.nf,water.mass,initial_source,water.device,complete_history=not bool(a.resume))
static_component_names=[]
if a.static_world_contact:
from dropperlab.experimental_sph.static_world_contact import StaticWorldContact,scene_mesh
world_vertices,world_faces,static_component_names=scene_mesh(model,data,origin)
planes=None if a.world_floor_z is None else [[np.array([0.,0.,a.world_floor_z])-origin,np.array([0.,0.,1.])]]
water.static_world=StaticWorldContact(water,world_vertices,world_faces,planes=planes)
if a.continuous_floor_viscosity:
from dropperlab.experimental_sph.plane_viscosity import PlaneViscosity
water.static_world.plane_viscosity=PlaneViscosity(water.static_world)
void=np.load(ROOT/'assets/generated/tube_inventory_cavity.npz')
tube_inventory=CavityInventory(water,void['vertices'].astype(np.float32),void['faces'].astype(np.int32))
policy=TransferPolicy(model,data,robots,float(void['vertices'][:,2].max()))
support=GraspSupport(model,data,robots) if a.grasp_feedback else None
if not .12<=a.transport_grasp_minimum<=.4:raise ValueError('Transport feedback threshold outside reviewed range')
if a.transport_grasp_minimum!=.12 and support is None:raise ValueError('Transport support target requires measured grasp feedback')
if support is not None:support.transport_minimum=a.transport_grasp_minimum
if a.bulb_center_z is not None:
if support is None or not -.01<=a.bulb_center_z<=-.003:raise ValueError('Bulb recentering requires feedback and reviewed pad target')
support.bulb_center_z=a.bulb_center_z
for r in robots:
r.synchronized_motion=a.synchronized_motion
if a.synchronized_motion:r.motion_speed=.5
recorder=ExperimentRecorder(out,spacing,a.record_water_interval,model=model)
for r,name in zip(robots,['Dropper','Tube']):
sr=data.site(r.arm+'_tcp').xmat.reshape(3,3);sp=data.site(r.arm+'_tcp').xpos
r.held=(name,sr.T@(data.body(name).xpos-sp),sr.T@data.body(name).xmat.reshape(3,3))
if a.rack_to_rack_v1 and not a.resume:
for r in robots:r.held=None
dry=data.body('Dropper').xpos.copy();beaker=data.body('Beaker').xpos.copy()
initial_depth=water.nf*water.volume/(np.pi*.032**2)
wet=np.r_[beaker[:2],beaker[2]+.002+max(3*spacing,initial_depth-a.immersion_depth)]
pred=mujoco.MjData(model);integration=np.empty(mujoco.mj_stateSize(model,mujoco.mjtState.mjSTATE_INTEGRATION));previous=np.zeros((3,6))
mujoco.mj_forward(model,pred)
corrected=mujoco.MjData(model);mujoco.mj_forward(model,corrected)
corrected_cavity=Cavity(model,corrected);predicted_cavity=Cavity(model,pred)
prediction_state=np.empty_like(integration)
sealed=False;sealed_at=None;last_plan=-1.;rows=[];states=[];report={'status':'running','task_success':False,'physics_qualified':False,
'scope':'unqualified same-run 3D-water aspiration/dispense/rack candidate; initially held objects','water_particles':water.nf,'spacing_m':spacing}
report['adaptive_contact_retries']=0
report['coupling_recomputations']=0
report['rejected_solid_intervals']=0
report['initial_water_ml']=water.nf*water.volume*1e6
report['immersion_depth_below_initial_surface_m']=a.immersion_depth
report['wet_tip_target_m']=wet.tolist()
report['neighbor_cache']=a.neighbor_cache
report['kinematics_only_prediction']=a.kinematics_only_prediction
report['gas_volume_tolerance_m3']=a.gas_volume_tolerance
report['grasp_feedback']=a.grasp_feedback;report['synchronized_motion']=a.synchronized_motion
report['recover_solid_dt_max_s']=a.recover_solid_dt
if not 0.<a.coupling_relaxation<=1.:raise ValueError('Coupling relaxation must be in (0,1]')
report['coupling_relaxation']=a.coupling_relaxation
if not 0.<a.coupling_tolerance<=5e-8:raise ValueError('Coupling tolerance must be positive and no more than 50 nm')
report['coupling_tolerance_m']=a.coupling_tolerance
report['native_ccd_tolerance']=model.opt.ccd_tolerance;report['native_ccd_iterations']=model.opt.ccd_iterations
report['independent_grasp_geometry']=a.independent_grasp_geometry
report['static_water_world_contact']=a.static_world_contact
report['static_world_collider_components']=len(static_component_names)
report['record_port_flux']=a.record_port_flux
report['substep_port_flux']=a.substep_port_flux
report['native_commit']='copy accepted native FSI endpoint' if a.adopt_native_result else 'independent repeat integration'
report['world_floor_z']=a.world_floor_z
report['floor_scope']='Fixed infinite liquid support plane; native solids must remain strictly above it' if a.world_floor_z is not None else 'No ground plane'
checkpoint_parameters={k:getattr(a,k) for k in ['sigma','release_duration','release_gap','fluid_dt','immersion_depth']}
if a.rack_to_rack_v1:checkpoint_parameters['rack_to_rack_v1']=True
if a.transport_grasp_minimum!=.12:checkpoint_parameters['transport_grasp_minimum']=a.transport_grasp_minimum
if a.bulb_center_z is not None:checkpoint_parameters['bulb_center_z']=a.bulb_center_z
if a.stem_preclose_gap!=.014:checkpoint_parameters['stem_preclose_gap']=a.stem_preclose_gap
if a.substep_port_flux:checkpoint_parameters['substep_port_flux']=True
if a.world_floor_z is not None:checkpoint_parameters['world_floor_z']=a.world_floor_z
if a.dispense_force_max!=3.:checkpoint_parameters['dispense_force_max']=a.dispense_force_max
if a.swept_water_contact:checkpoint_parameters['swept_water_contact']=True
if a.continuous_floor_viscosity:checkpoint_parameters['continuous_floor_viscosity']=True
if a.continuous_glass_wall_table:
checkpoint_parameters['continuous_glass_wall_table_sha256']=water.continuous_glass_wall.sha256
report['continuous_wall_scope']='Opt-in continuous annular glass adhesion potential; all native collision facets unchanged. Wall-force model migration is explicit; not inherited physical qualification.'
if a.continuous_glass_pressure_table:
checkpoint_parameters['continuous_glass_pressure_table_sha256']=water.continuous_glass_pressure.sha256
report['continuous_pressure_scope']='Consistent continuous annular glass density/divergence/pressure/reaction operator. Native collision facets unchanged. Explicit numerical model migration, not inherited qualification.'
advanced_defaults=dict(surface_model='pair',kernel_support=2.,viscosity_kernel_support=None,viscosity_regularization=.01,
mirror_no_slip=False,wall_velocity_model='quadratic_mirror',pressure_complementarity=False,
pressure_tolerance=5e-5,maximum_pressure_iterations=200,number_density_area_scale=1.,interface_kernel_support=3.,discrete_interface_normalization=False,interface_epsilon=.05)
if any(getattr(a,k)!=v for k,v in advanced_defaults.items()):
checkpoint_parameters.update({k:getattr(a,k) for k in advanced_defaults})
checkpoint_parameters.update(seed_spacing_m=spacing,initial_particle_count=water.nf)
report['solver_parameters']=checkpoint_parameters.copy()
if a.resume:
previous,logic,resume_meta=load_checkpoint(a.resume,a.source/'solid/model.mjb',model,data,water,robots,cavity,policy,checkpoint_parameters,
restore_numerical_options=a.ccd_tolerance is None and a.ccd_iterations is None)
sealed,sealed_at,last_plan=logic;report['resumed_accepted_state']=str(a.resume.resolve())
report['resumed_physical_time']=float(data.time)
if a.bimanual_stem_support:
from dropperlab.bimanual_policy import BimanualPolicy
if a.rack_to_rack_v1:
from dropperlab.rack_to_rack_policy import RackToRackPolicy
saved_policy={k:v for k,v in policy.__dict__.items() if k not in ['model','data','robots']}
saved_targets=[r.target.copy() for r in robots]
policy=(RackToRackPolicy if a.rack_to_rack_v1 else BimanualPolicy)(model,data,robots,float(void['vertices'][:,2].max()))
if saved_policy.get('policy_kind') in ('bimanual_stem_support_v1','rack_to_rack_v1'):
if a.rack_to_rack_v1 and saved_policy.get('policy_kind')!='rack_to_rack_v1':raise RuntimeError('Old held-object trajectory cannot become new cold-start V1')
policy.__dict__.update(saved_policy)
for r,target in zip(robots,saved_targets):r.target=target
if saved_policy.get('controller_revision',1)<2:
if policy.stem_secured or policy.stage not in ['await_dose','lift_after_aspiration','transfer_for_stem_support','park_above','park_seat','park_release','park_retreat']:
raise RuntimeError('The reviewed grasp revision requires a checkpoint before the rigid stem grasp')
# Replace an unexecuted motor approach plan only. Accepted rigid,
# elastic, controller reference and water arrays remain untouched.
policy.stem_rotation=np.diag([-1.,-1.,1.]).tolist();policy.stem_height=.080
policy.controller_revision=2
policy.events.append(dict(time=float(data.time),stage='reviewed_unexecuted_stem_approach_revision'))
else:policy.events=saved_policy['events']+[{'time':float(data.time),'stage':'bimanual_stem_support_adaptation'}]
policy.dispense_force_max=a.dispense_force_max
policy.stem_preclose_gap=a.stem_preclose_gap
if not a.resume and not a.rack_to_rack_v1:policy.stage='await_dose';policy.entered=float(data.time);policy.events=[]
report['scope']='unqualified coupled 3D-water transfer with contact-only second-hand rigid glass support'
report['bimanual_stem_support']=True
if a.rack_to_rack_v1:report.update(scope='New cold-start V1: empty dropper on A, inverted empty tube on B, initially empty home hands',rack_to_rack_v1=True)
recorder.capture(data,water.positions_numpy()+origin,water_velocity=water.velocities_numpy())
print(json.dumps({'stage':'gpu_coupled_initialized','particles':water.nf,'wall_seconds':time.perf_counter()-started}),flush=True)
def poses(offset,length):
positions=[];rotations=[];centers=[];linear=[];angular=[]
for name in names:
b=data.body(name);e=pred.body(name);c0=data.xipos[b.id];c1=pred.xipos[e.id]
r0=b.xmat.reshape(3,3);vector=Rotation.from_matrix(e.xmat.reshape(3,3)@r0.T).as_rotvec();fraction=np.clip(offset/length,0,1)
r=Rotation.from_rotvec(vector*fraction).as_matrix()@r0;c=(1-fraction)*c0+fraction*c1
positions.append(c+r@(r0.T@(b.xpos-c0))-origin);rotations.append(r);centers.append(c-origin)
linear.append((c1-c0)/length);angular.append(vector/length)
return np.array(positions),np.array(rotations),np.array(centers),np.array(linear),np.array(angular)
def sync_current():
position=[];rotation=[];com=[];linear=[];angular=[]
for name in names:
body=data.body(name);velocity=np.empty(6)
mujoco.mj_objectVelocity(model,data,mujoco.mjtObj.mjOBJ_BODY,body.id,velocity,0)
position.append(body.xpos-origin);rotation.append(body.xmat.reshape(3,3));com.append(data.xipos[body.id]-origin)
linear.append(velocity[3:]);angular.append(velocity[:3])
water.sync_bodies(position,rotation,com,linear,angular)
def prediction_geometry(state):
if a.kinematics_only_prediction:
mujoco.mj_kinematics(model,state);mujoco.mj_comPos(model,state);mujoco.mj_flex(model,state)
else:mujoco.mj_forward(model,state)
def endpoint_geometry(state):
if a.kinematics_only_prediction:prediction_geometry(state)
else:mujoco.mj_fwdPosition(model,state)
try:
frame=0;next_step_recovery=float(data.time)+.005;controlled_stop=False
while data.time<a.duration-1e-10:
if water.port_flux is not None and not a.substep_port_flux:
# Smaller numerical intervals keep every real port crossing inside
# one accepted water step; no physical coefficient is changed.
model.opt.timestep=min(model.opt.timestep,a.fluid_dt,a.recover_solid_dt if a.recover_solid_dt>0 else a.fluid_dt)
t=float(data.time);dt=float(model.opt.timestep)
previous_before=previous.copy()
start=IntervalState(model,data,robots,cavity,policy)
initial_logic=(sealed,sealed_at,last_plan)
checkpoint=water.candidate_checkpoint()
# The legacy endpoint ledger is written only after acceptance and never
# needs a candidate backup. Substep measurements do need rollback.
flux_snapshot=water.port_flux.snapshot() if water.port_flux is not None and a.substep_port_flux else None
tip_before=data.body('Dropper').xpos.copy()-origin
rotation_before=data.body('Dropper').xmat.reshape(3,3).copy()
if water.port_flux is not None and not a.substep_port_flux and dt>a.fluid_dt+1e-15:
raise RuntimeError('Port-flux measurement requires each accepted solid interval to contain at most one water step')
sync_current()
bore_ml=water.bore_volume()*1e6;tube_ml=tube_inventory.volume()*1e6
if support and a.bimanual_stem_support:
support.right_object=policy.right_object;support.left_object=getattr(policy,'left_object','Dropper')
grasp_ready=support.regulate(policy) if support else True
vertices=data.flexvert_xpos[cavity.start:cavity.start+integrity.total_vertices]
jac_start=np.linalg.det(vertices[integrity.tetrahedra[:,1:]]-vertices[integrity.tetrahedra[:,0,None]])/integrity.reference_det
if policy.stage in ['dispense','supported_dispense'] or a.bimanual_stem_support:
policy.regulate_dispense(float(jac_start.min()),cavity.pressure)
if a.rack_to_rack_v1:policy.measured_bulb_volume_m3=cavity.volume()
policy.port_colour=float(water.port_color())
active_transfer=policy.update(bore_ml,tube_ml,grasp_ready)
aspiration_elapsed=t-policy.entered if a.rack_to_rack_v1 else t
if not active_transfer and aspiration_elapsed>a.aspiration_timeout:raise RuntimeError('Actual 1 mL aspiration not established before timeout')
if not active_transfer and t-last_plan>.02:
last_plan=t;policy.command_aspiration(wet)
color=water.port_color();surface=data.body('Beaker').xpos[2]+.002+water.nf*water.volume/(np.pi*.032**2)
if not sealed and color>.25 and data.body('Dropper').xpos[2]<surface-spacing:sealed=True;sealed_at=t
alpha=np.clip((t-((sealed_at+.03) if sealed_at is not None else float('inf')))/a.release_duration,0,1)
limit=3.-2.2*alpha*alpha*(3-2*alpha)
if not active_transfer:
for actuator in robots[0].gids:model.actuator_forcerange[actuator]=[-limit,limit]
else:limit=float(model.actuator_forcerange[robots[0].gids[0],1])
joint_fraction=None
if a.bimanual_stem_support and policy.stem_secured:
maximum=max(float(np.max(np.abs(r.target-r.reference))) for r in robots)
joint_fraction=min(1.,.5*dt/max(maximum,1e-15))
for i,r in enumerate(robots):
if not active_transfer:r.grip=min(a.release_gap*alpha*alpha*(3-2*alpha),policy.safe_grip_ceiling) if i==0 else (.044 if a.rack_to_rack_v1 else 0.)
r.update(dt,joint_fraction=joint_fraction)
# Empty, dry glass reconnects gas to the atmosphere. Retention/sealing
# still needs a qualified multiphase interface; no success flag is granted.
vented=not sealed or (active_transfer and bore_ml<.001 and color<.1)
cavity.apply(dt,vented=vented,water_volume=water.bore_volume(),apply_forces=False)
data.xfrc_applied[:]=0.;cavity.apply_pressure(cavity.pressure)
for i,name in enumerate(names):data.xfrc_applied[model.body(name).id]+=previous[i]
mujoco.mj_getState(model,data,integration,mujoco.mjtState.mjSTATE_INTEGRATION);mujoco.mj_setState(model,pred,integration,mujoco.mjtState.mjSTATE_INTEGRATION)
if not a.kinematics_only_prediction:mujoco.mj_forward(model,pred)
mujoco.mj_step(model,pred);endpoint_geometry(pred)
volume_start=cavity.volume()
water.contact_predictor_recovery=a.contact_predictor_recovery
water.paired_world_contact=a.paired_world_contact
if a.paired_world_contact and not hasattr(water,'paired_contact_applied'):
water.paired_contact_applied=wp.zeros(1,dtype=int,device=water.device)
for coupling in range(a.maximum_coupling_iterations):
if coupling:
water.reject_candidate_interval(checkpoint);report['coupling_recomputations']+=1
if a.substep_port_flux:water.port_flux.reject(flux_snapshot)
substeps=max(1,math.ceil(dt/min(a.fluid_dt,.3*spacing/max(water.maximum_speed(),.1))));nominal_h=dt/substeps
impulse=np.zeros((3,6));pressure_sum=0.;volume_end=predicted_cavity.volume()
elapsed=0.;retry_limit=nominal_h;rejected_prediction=False
while elapsed<dt-1e-14:
h=min(retry_limit,dt-elapsed)
pos,rot,com,lin,ang=poses(elapsed,dt);end_pos,end_rot,_,_,_=poses(elapsed+h,dt)
water.sync_bodies(pos,rot,com,lin,ang,end_pos,end_rot)
volume=volume_start+(volume_end-volume_start)*(elapsed+.5*h)/dt
gas=volume+cavity.dead_volume-water.bore_volume();pressure=cavity.gas_pv/gas
if gas<=1e-7 or pressure<3000:raise RuntimeError('Invalid gas state')
flux_before=None
if a.substep_port_flux:
flux_before=wp.empty(water.nf,dtype=wp.vec3,device=water.device);wp.copy(flux_before,water.x,count=water.nf)
try:liquid=water.step(h,gas_pressure=pressure-cavity.patm)
except RuntimeError as e:
if a.contact_predictor_recovery and 'physical CAD contact rejected' in str(e) and h<1e-6 and water.rejected_candidate_wrench is not None:
# Correct only the independent solid predictor with the
# rejected contact reaction. The next coupling iteration
# recomputes all water/flux from the accepted checkpoint.
trial_force,trial_torque=water.rejected_candidate_wrench
seed_impulse=impulse.copy()
for i,name in enumerate(names):
actual_com=data.xipos[model.body(name).id]-origin
seed_impulse[i]+=(dt-elapsed)*np.r_[trial_force[i],trial_torque[i]+np.cross(com[i]-actual_com,trial_force[i])]
mujoco.mj_setState(model,corrected,integration,mujoco.mjtState.mjSTATE_INTEGRATION)
prediction_geometry(corrected);corrected.xfrc_applied[:]=0.
corrected_cavity.apply_pressure((pressure_sum+(dt-elapsed)*pressure)/dt)
for i,name in enumerate(names):corrected.xfrc_applied[model.body(name).id]+=seed_impulse[i]/dt
mujoco.mj_step(model,corrected);endpoint_geometry(corrected)
mujoco.mj_getState(model,corrected,prediction_state,mujoco.mjtState.mjSTATE_INTEGRATION)
mujoco.mj_setState(model,pred,prediction_state,mujoco.mjtState.mjSTATE_INTEGRATION);prediction_geometry(pred)
rejected_prediction=True
report['contact_predictor_retries']=report.get('contact_predictor_retries',0)+1
print(json.dumps({'stage':'rejected_contact_predictor_retry','time':t,'coupling_iteration':coupling,'rejected_water_step':h}),flush=True)
break
if not a.adaptive_contact or 'physical CAD contact rejected' not in str(e) or h<1e-6:raise
retry_limit=h/2;report['adaptive_contact_retries']+=1
continue
if a.substep_port_flux:
# Trial measurements follow each actual numerical water
# step and its moving CAD. They are published only after
# the outer native endpoint passes the existing FSI guard.
water.port_flux.advance(flux_before,water.x,pos[1],rot[1],end_pos[1],end_rot[1])
force=water.force.numpy();torque=water.torque.numpy()
for i,name in enumerate(names):
actual_com=data.xipos[model.body(name).id]-origin
impulse[i]+=h*np.r_[force[i],torque[i]+np.cross(com[i]-actual_com,force[i])]
pressure_sum+=h*pressure;elapsed+=h
if rejected_prediction:
endpoint_error=float('inf');volume_endpoint_error=float('inf');geometry_failures=1
continue
# Compute an independently integrated corrected endpoint. The live
# solid state stays at the interval start until the candidate passes.
mujoco.mj_setState(model,corrected,integration,mujoco.mjtState.mjSTATE_INTEGRATION)
prediction_geometry(corrected);corrected.xfrc_applied[:]=0.
corrected_cavity.apply_pressure(pressure_sum/dt)
for i,name in enumerate(names):corrected.xfrc_applied[model.body(name).id]+=impulse[i]/dt
mujoco.mj_step(model,corrected);endpoint_geometry(corrected)
endpoint_position=np.array([corrected.body(name).xpos-origin for name in names])
endpoint_rotation=np.array([corrected.body(name).xmat.reshape(3,3) for name in names])
geometry_failures=water.actual_geometry_failures(endpoint_position,endpoint_rotation)
endpoint_error=max(float(np.linalg.norm(corrected.body(name).xpos-pred.body(name).xpos))+
.15*float(np.linalg.norm(corrected.body(name).xmat-pred.body(name).xmat)) for name in names)
volume_endpoint_error=abs(corrected_cavity.volume()-predicted_cavity.volume())
if endpoint_error<a.coupling_tolerance and volume_endpoint_error<=a.gas_volume_tolerance and geometry_failures==0:break
mujoco.mj_getState(model,corrected,prediction_state,mujoco.mjtState.mjSTATE_INTEGRATION)
if a.coupling_relaxation<1.:
old_qpos=pred.qpos.copy();old_qvel=pred.qvel.copy()
difference=np.empty(model.nv)
mujoco.mj_differentiatePos(model,difference,1.,old_qpos,corrected.qpos)
mujoco.mj_setState(model,pred,prediction_state,mujoco.mjtState.mjSTATE_INTEGRATION)
# Damp only the independent candidate prediction on MuJoCo's
# configuration manifold. Live bodies continue native steps.
pred.qpos[:]=old_qpos;mujoco.mj_integratePos(model,pred.qpos,difference,a.coupling_relaxation)
pred.qvel[:]=(1-a.coupling_relaxation)*old_qvel+a.coupling_relaxation*corrected.qvel
else:mujoco.mj_setState(model,pred,prediction_state,mujoco.mjtState.mjSTATE_INTEGRATION)
prediction_geometry(pred)
else:
water.reject_candidate_interval(checkpoint)
if a.substep_port_flux:water.port_flux.reject(flux_snapshot)
if dt<=a.minimum_solid_dt:raise RuntimeError(f'FSI candidate did not converge at minimum solid step; error={endpoint_error:g}, gas volume error={volume_endpoint_error:g}, CAD failures={geometry_failures}')
start.reject(model,data,robots,cavity,policy);sealed,sealed_at,last_plan=initial_logic
model.opt.timestep=max(a.minimum_solid_dt,dt/2);report['rejected_solid_intervals']+=1
next_step_recovery=t+.020
print(json.dumps({'stage':'rejected_coupled_interval_retry','time':t,'new_solid_dt':model.opt.timestep,
'endpoint_error_m':endpoint_error,'gas_volume_error_m3':volume_endpoint_error,'actual_cad_failures':geometry_failures}),flush=True)
continue
data.xfrc_applied[:]=0.;cavity.apply_pressure(pressure_sum/dt)
previous=impulse/dt
for i,name in enumerate(names):data.xfrc_applied[model.body(name).id]+=previous[i]
if a.adopt_native_result:
# Commit the independently integrated, already accepted FSI result.
# This is the native solver endpoint, never a prescribed object pose.
mujoco.mj_copyData(data,model,corrected)
else:mujoco.mj_step(model,data)
mujoco.mj_fwdPosition(model,data)
if np.max(np.abs(data.qpos-corrected.qpos))>1e-10:raise RuntimeError('Live solid integration differs from corrected native endpoint')
if any(c.dist<-.0001 for c in data.contact):raise RuntimeError('Solid contact overlap exceeds 0.1 mm')
sync_current()
if water.tabletop_geometry_failures(origin):raise RuntimeError('Water/table geometry guard; stationary world-fluid contacts remain unqualified')
if any(w.number for w in data.warning):raise RuntimeError('Native solid warning')
if a.world_floor_z is not None:
moving=(model.body_weldid[model.geom_bodyid]!=0)&(model.geom_contype!=0)
if np.any(data.geom_xpos[moving,2]-model.geom_rbound[moving]<=a.world_floor_z):raise RuntimeError('Native solid approached the liquid-only ground plane; native ground collision must be modeled before continuing')
vertices=data.flexvert_xpos[cavity.start:cavity.start+integrity.total_vertices]
jac=np.linalg.det(vertices[integrity.tetrahedra[:,1:]]-vertices[integrity.tetrahedra[:,0,None]])/integrity.reference_det
if jac.min()<.5:raise RuntimeError('FEM material guard')
if water.port_flux is not None and not a.substep_port_flux:
water.port_flux.advance(checkpoint[0],water.x,tip_before,rotation_before,
data.body('Dropper').xpos-origin,data.body('Dropper').xmat.reshape(3,3))
if frame%33==0:
geometry=integrity.check();row={'time':float(data.time),'stage':policy.stage if active_transfer else 'aspirate' if alpha>0 else 'immerse',
'bore_water_ml':water.bore_volume()*1e6,'bulb_volume_ml':cavity.volume()*1e6,'gas_pressure_pa':pressure_sum/dt,
'tube_water_ml':tube_inventory.volume()*1e6,
'velocity_max':water.maximum_speed(),'left_force_limit_n':limit,'left_grip_target_m':robots[0].grip,'port_color':color,**geometry}
if grasp_geometry:row['independent_fem_jaw_overlap_m']=grasp_geometry.check(data)
row.update(coupling_iterations=coupling+1,solid_endpoint_error_m=endpoint_error,
gas_volume_endpoint_error_m3=volume_endpoint_error,actual_endpoint_cad_failures=geometry_failures)
row.update(liquid)
if water.port_flux is not None:row.update(water.port_flux.summary())
row.update(left_joint_target_rad=robots[0].target.tolist(),
left_tcp_world_m=data.site('left_tcp').xpos.tolist(),
dropper_world_m=data.body('Dropper').xpos.tolist(),
aspiration_arm_hold=policy.aspiration_goal_set,dispense_feedback=policy.dispense_feedback)
if support:row['native_grasp_normal_forces_n']=policy.contact_support
if support and policy.stage in ['home','settle']:
from dropperlab.seating_measurement import measured_seats
row.update(measured_seats(model,support.state_view(),robots))
rows.append(row);states.append(data.qpos.copy());report['last_state']=row;report['wall_seconds']=time.perf_counter()-started
if data.time-recorder.last>=a.record_water_interval-1e-10:
recorder.capture(data,water.positions_numpy()+origin,water_velocity=water.velocities_numpy())
save_checkpoint(out/'accepted_checkpoint.npz',a.source/'solid/model.mjb',model,data,water,robots,cavity,policy,previous,(sealed,sealed_at,last_plan),checkpoint_parameters)
(out/'progress.json').write_text(json.dumps(report,indent=2));print(json.dumps(row),flush=True)
if policy.done:break
if a.stop_request and a.stop_request.exists():controlled_stop=True;break
if a.recover_solid_dt>0 and data.time>=next_step_recovery and coupling<4:
model.opt.timestep=min(a.recover_solid_dt,2*model.opt.timestep)
next_step_recovery=float(data.time)+.020
frame+=1
report['status']='completed'
report['execution_complete']=policy.done
if not policy.done:report.update(status='incomplete',error='Controlled stop at an accepted coupled boundary' if controlled_stop else 'Physical time limit reached before the full sequence completed')
recorder.capture(data,water.positions_numpy()+origin,force=True,water_velocity=water.velocities_numpy())
save_checkpoint(out/'accepted_checkpoint.npz',a.source/'solid/model.mjb',model,data,water,robots,cavity,policy,previous,(sealed,sealed_at,last_plan),checkpoint_parameters)
except Exception as e:
report.update(status='failed',error=str(e));print(str(e),flush=True)
if 'swept water path' in str(e) and getattr(water,'swept_water_audit',None) is not None:
report['swept_failure_detail']=water.swept_water_audit.describe_failure()
# An exception may occur after several liquid substeps in an unaccepted
# solid interval. Persist final arrays only after rejecting that interval.
if 'checkpoint' in locals():
water.reject_candidate_interval(checkpoint)
if flux_snapshot is not None:water.port_flux.reject(flux_snapshot)
start.reject(model,data,robots,cavity,policy);sealed,sealed_at,last_plan=initial_logic
previous=previous_before
report['failed_interval_rolled_back']=True
sync_current()
positions=np.array([data.body(name).xpos-origin for name in names])
rotations=np.array([data.body(name).xmat.reshape(3,3) for name in names])
failures=water.actual_geometry_failures(positions,rotations)
report['rollback_state_cad_failures']=failures
if not failures:
save_checkpoint(out/'accepted_checkpoint.npz',a.source/'solid/model.mjb',model,data,water,robots,cavity,policy,previous,(sealed,sealed_at,last_plan),checkpoint_parameters)
report.update(physical_seconds=float(data.time),wall_seconds=time.perf_counter()-started)
report['phase_events']=policy.events
if water.port_flux is not None:report.update(water.port_flux.summary())
(out/'report.json').write_text(json.dumps(report,indent=2));(out/'trajectory.json').write_text(json.dumps(rows,indent=2))
np.savez_compressed(out/'solid_states.npz',qpos=np.array(states))
np.savez_compressed(out/'final_water.npz',position=water.positions_numpy()+origin,velocity=water.velocities_numpy(),mass=water.mass)
print(json.dumps({k:v for k,v in report.items() if k!='last_state'},indent=2))
|