Download processing/scripts/analyze_multimodal_case.py from UARK-NED3/BubbleID-Flow: direct link, hf CLI and curl.
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https://huggingface.co/datasets/UARK-NED3/BubbleID-Flow/resolve/main/processing/scripts/analyze_multimodal_case.py
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hf download hf://datasets/UARK-NED3/BubbleID-Flow/processing/scripts/analyze_multimodal_case.py
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curl -L -o analyze_multimodal_case.py https://huggingface.co/datasets/UARK-NED3/BubbleID-Flow/resolve/main/processing/scripts/analyze_multimodal_case.py
23.2 kB
| from __future__ import annotations | |
| import argparse | |
| import re | |
| from pathlib import Path | |
| import cv2 | |
| import matplotlib.pyplot as plt | |
| import numpy as np | |
| import pandas as pd | |
| import torch | |
| from detectron2 import model_zoo | |
| from detectron2.config import get_cfg | |
| from detectron2.engine import DefaultPredictor | |
| from bubbleid_flow.paths import iter_images | |
| from bubbleid_flow.preprocess import crop_array, parse_roi | |
| from bubbleid_flow.thermal_windows import ( | |
| choose_operating_window, | |
| infer_time_gap_threshold, | |
| max_internal_gap_s, | |
| split_contiguous_windows, | |
| ) | |
| from bubbleid_flow.vapor_fraction import ( | |
| DEFAULT_ACTIVE_COLUMN_THRESHOLD, | |
| active_length_threshold_sweep, | |
| projected_mask_metrics, | |
| threshold_label, | |
| ) | |
| def main() -> None: | |
| parser = argparse.ArgumentParser( | |
| description="Create a first multimodal thermal/acoustic/image summary for one test case." | |
| ) | |
| parser.add_argument("--case-label", required=True, help="Case label such as 15gs_20C.") | |
| parser.add_argument("--image-root", required=True, help="Root containing image state folders.") | |
| parser.add_argument("--thermal-workbook", required=True, help="Reduced thermal workbook.") | |
| parser.add_argument("--thermal-input-workbook", required=True, help="Workbook containing voltage.") | |
| parser.add_argument("--ae-hit-file", required=True, help="EasyAE HIT text file.") | |
| parser.add_argument("--weights", required=True, help="Detectron2 Mask R-CNN weights.") | |
| parser.add_argument("--output-dir", required=True) | |
| parser.add_argument("--roi", default="0,485,1024,70") | |
| parser.add_argument("--frames-per-state", type=int, default=12) | |
| parser.add_argument("--bins", type=int, default=64) | |
| parser.add_argument("--score-threshold", type=float, default=0.30) | |
| parser.add_argument( | |
| "--detections-per-image", | |
| type=int, | |
| default=None, | |
| help="Optional Detectron2 TEST.DETECTIONS_PER_IMAGE override.", | |
| ) | |
| parser.add_argument("--active-column-threshold", type=float, default=DEFAULT_ACTIVE_COLUMN_THRESHOLD) | |
| parser.add_argument( | |
| "--active-column-sensitivity-thresholds", | |
| default="0.025,0.05,0.075", | |
| help=( | |
| "Comma-separated projected-vapor column thresholds used to audit " | |
| "active-length sensitivity. Include --active-column-threshold in this list." | |
| ), | |
| ) | |
| parser.add_argument("--voltage-tolerance", type=float, default=0.75) | |
| parser.add_argument("--device", default="cuda" if torch.cuda.is_available() else "cpu") | |
| args = parser.parse_args() | |
| output_dir = Path(args.output_dir) | |
| output_dir.mkdir(parents=True, exist_ok=True) | |
| overlay_dir = output_dir / "representative_overlays" | |
| overlay_dir.mkdir(parents=True, exist_ok=True) | |
| states = discover_states(Path(args.image_root)) | |
| predictor = DefaultPredictor( | |
| _build_cfg(args.weights, args.score_threshold, args.device, args.detections_per_image) | |
| ) | |
| image_summary, frame_metrics = summarize_image_states( | |
| states=states, | |
| predictor=predictor, | |
| roi=parse_roi(args.roi), | |
| frames_per_state=args.frames_per_state, | |
| active_column_threshold=args.active_column_threshold, | |
| active_column_sensitivity_thresholds=parse_thresholds( | |
| args.active_column_sensitivity_thresholds, | |
| required_threshold=args.active_column_threshold, | |
| ), | |
| overlay_dir=overlay_dir, | |
| ) | |
| thermal_summary = summarize_thermal_states( | |
| states=states, | |
| thermal_workbook=Path(args.thermal_workbook), | |
| thermal_input_workbook=Path(args.thermal_input_workbook), | |
| voltage_tolerance=args.voltage_tolerance, | |
| ) | |
| ae_summary = summarize_ae_by_thermal_windows( | |
| hit_file=Path(args.ae_hit_file), | |
| thermal_windows=thermal_summary[ | |
| ["state_label", "time_start_s", "time_end_s"] | |
| ].dropna(), | |
| ) | |
| summary = ( | |
| image_summary.merge(thermal_summary, on=["state_label", "state_voltage"], how="outer") | |
| .merge(ae_summary, on="state_label", how="left") | |
| .sort_values("state_voltage", na_position="last") | |
| ) | |
| summary_path = output_dir / f"{args.case_label}_multimodal_state_summary.csv" | |
| frame_metrics_path = output_dir / f"{args.case_label}_image_frame_metrics.csv" | |
| figure_path = output_dir / f"{args.case_label}_integrated_baseline_panel.png" | |
| image_summary_path = output_dir / f"{args.case_label}_image_state_summary.csv" | |
| summary.to_csv(summary_path, index=False) | |
| frame_metrics.to_csv(frame_metrics_path, index=False) | |
| image_summary.to_csv(image_summary_path, index=False) | |
| plot_integrated_panel( | |
| case_label=args.case_label, | |
| summary=summary, | |
| figure_path=figure_path, | |
| thermal_workbook=Path(args.thermal_workbook), | |
| overlay_dir=overlay_dir, | |
| ) | |
| print(f"Wrote {summary_path}") | |
| print(f"Wrote {frame_metrics_path}") | |
| print(f"Wrote {figure_path}") | |
| def discover_states(image_root: Path) -> list[dict]: | |
| states = [] | |
| for path in sorted([p for p in image_root.iterdir() if p.is_dir()], key=lambda p: parse_state_voltage(p.name)): | |
| voltage = parse_state_voltage(path.name) | |
| if voltage is None: | |
| continue | |
| states.append({"state_label": path.name, "state_voltage": voltage, "path": path}) | |
| return states | |
| def parse_state_voltage(label: str) -> float | None: | |
| match = re.search(r"\d+(?:\.\d+)?", label) | |
| return float(match.group(0)) if match else None | |
| def parse_thresholds(text: str, *, required_threshold: float | None = None) -> list[float]: | |
| thresholds = [] | |
| for item in text.split(","): | |
| item = item.strip() | |
| if not item: | |
| continue | |
| threshold = float(item) | |
| if not 0 <= threshold <= 1: | |
| raise ValueError("active-column sensitivity thresholds must be between 0 and 1") | |
| thresholds.append(threshold) | |
| if required_threshold is not None and not any( | |
| abs(threshold - required_threshold) < 1e-12 for threshold in thresholds | |
| ): | |
| thresholds.append(required_threshold) | |
| return sorted(set(thresholds)) | |
| def sample_evenly(paths: list[Path], count: int) -> list[Path]: | |
| if count <= 0 or len(paths) <= count: | |
| return paths | |
| indices = np.linspace(0, len(paths) - 1, count, dtype=int) | |
| return [paths[int(index)] for index in indices] | |
| def summarize_image_states( | |
| states: list[dict], | |
| predictor: DefaultPredictor, | |
| roi: tuple[int, int, int, int], | |
| frames_per_state: int, | |
| active_column_threshold: float, | |
| active_column_sensitivity_thresholds: list[float], | |
| overlay_dir: Path, | |
| ) -> tuple[pd.DataFrame, pd.DataFrame]: | |
| rows = [] | |
| frame_rows = [] | |
| for state in states: | |
| available_image_paths = iter_images(state["path"]) | |
| image_paths = sample_evenly(available_image_paths, frames_per_state) | |
| representative_index = len(image_paths) // 2 if image_paths else -1 | |
| sample_fraction = ( | |
| len(image_paths) / len(available_image_paths) if available_image_paths else np.nan | |
| ) | |
| for frame_index, image_path in enumerate(image_paths): | |
| image = cv2.imread(str(image_path), cv2.IMREAD_COLOR) | |
| if image is None: | |
| raise ValueError(f"Could not read image: {image_path}") | |
| cropped = crop_array(image, roi) | |
| combined = predict_combined_mask(predictor, cropped) | |
| metrics = projected_mask_metrics( | |
| combined, | |
| active_column_threshold=active_column_threshold, | |
| ) | |
| sensitivity_metrics = active_length_threshold_sweep( | |
| combined, | |
| active_column_sensitivity_thresholds, | |
| ) | |
| frame_rows.append( | |
| { | |
| "state_label": state["state_label"], | |
| "state_voltage": state["state_voltage"], | |
| "frame_name": image_path.name, | |
| "available_frames_in_state": len(available_image_paths), | |
| "frames_requested_per_state": frames_per_state, | |
| "sample_fraction": sample_fraction, | |
| "active_column_threshold": active_column_threshold, | |
| **metrics, | |
| **sensitivity_metrics, | |
| } | |
| ) | |
| if frame_index == representative_index: | |
| overlay_path = overlay_dir / f"{safe_name(state['state_label'])}_{image_path.stem}_overlay.png" | |
| cv2.imwrite(str(overlay_path), overlay_combined_mask(cropped, combined)) | |
| frame_metrics = pd.DataFrame(frame_rows) | |
| grouped = frame_metrics.groupby(["state_label", "state_voltage"], as_index=False) | |
| aggregations = { | |
| "image_frames": ("frame_name", "count"), | |
| "available_frames_in_state": ("available_frames_in_state", "first"), | |
| "frames_requested_per_state": ("frames_requested_per_state", "first"), | |
| "sample_fraction": ("sample_fraction", "first"), | |
| "active_column_threshold": ("active_column_threshold", "first"), | |
| "vapor_area_fraction_mean": ("vapor_area_fraction", "mean"), | |
| "vapor_area_fraction_std": ("vapor_area_fraction", "std"), | |
| "active_length_fraction_mean": ("active_length_fraction", "mean"), | |
| "vapor_front_x_px_mean": ("vapor_front_x_px", "mean"), | |
| } | |
| for threshold in active_column_sensitivity_thresholds: | |
| column = f"active_length_fraction_thr_{threshold_label(threshold)}" | |
| if column in frame_metrics.columns: | |
| aggregations[f"{column}_mean"] = (column, "mean") | |
| if "active_length_threshold_sensitivity_range" in frame_metrics.columns: | |
| aggregations["active_length_threshold_sensitivity_range_mean"] = ( | |
| "active_length_threshold_sensitivity_range", | |
| "mean", | |
| ) | |
| if "active_length_thresholds_evaluated" in frame_metrics.columns: | |
| aggregations["active_length_thresholds_evaluated"] = ( | |
| "active_length_thresholds_evaluated", | |
| "first", | |
| ) | |
| summary = grouped.agg(**aggregations) | |
| return summary, frame_metrics | |
| def predict_combined_mask(predictor: DefaultPredictor, image: np.ndarray) -> np.ndarray: | |
| outputs = predictor(image) | |
| instances = outputs["instances"].to("cpu") | |
| masks = instances.pred_masks.numpy() if instances.has("pred_masks") else np.empty((0, *image.shape[:2])) | |
| return np.any(masks, axis=0).astype(np.uint8) * 255 if len(masks) else np.zeros(image.shape[:2], dtype=np.uint8) | |
| def summarize_thermal_states( | |
| states: list[dict], | |
| thermal_workbook: Path, | |
| thermal_input_workbook: Path, | |
| voltage_tolerance: float, | |
| ) -> pd.DataFrame: | |
| thermal = pd.read_excel(thermal_workbook) | |
| thermal_input = pd.read_excel(thermal_input_workbook) | |
| combined = thermal.copy() | |
| voltage_col = find_column(thermal_input, ["Voltage"]) | |
| time_col = find_column(combined, ["Time [s]"]) | |
| power_col = find_column(combined, ["Power"]) | |
| heat_flux_col = find_column(combined, ["Heat Flux"]) | |
| mass_flow_col = find_column(combined, ["Mass Flow Rate"]) | |
| velocity_col = find_column(combined, ["Fluid Velocity"]) | |
| inlet_subcool_col = find_column(combined, ["Inlet Subcooling"]) | |
| pin_col = find_column(combined, ["Inlet Pressure"]) | |
| pout_col = find_column(combined, ["Outlet Pressure"]) | |
| tin_col = find_column(combined, ["Inlet Temperature"]) | |
| tout_col = find_column(combined, ["Outlet Temperature"]) | |
| wall_temperature_cols = [ | |
| col for col in combined.columns if str(col).startswith("Temperature at x") | |
| ] | |
| htc_cols = [col for col in combined.columns if "Heat Transfer Coefficient" in str(col)] | |
| quality_cols = [col for col in combined.columns if str(col).startswith("Quality at x")] | |
| combined["_abs_voltage"] = thermal_input[voltage_col].abs().to_numpy() | |
| gap_threshold_s = infer_time_gap_threshold(combined, time_col) | |
| rows = [] | |
| previous_window_end_s: float | None = None | |
| for state in states: | |
| target = state["state_voltage"] | |
| candidate_rows = combined[(combined["_abs_voltage"] - target).abs() <= voltage_tolerance] | |
| if candidate_rows.empty: | |
| rows.append( | |
| { | |
| "state_label": state["state_label"], | |
| "state_voltage": target, | |
| "thermal_rows": 0, | |
| "thermal_candidate_rows": 0, | |
| "thermal_window_blocks": 0, | |
| "thermal_window_selection": "no_voltage_matched_rows", | |
| "thermal_window_gap_threshold_s": gap_threshold_s, | |
| } | |
| ) | |
| continue | |
| windows = split_contiguous_windows( | |
| candidate_rows, | |
| time_col, | |
| max_gap_s=gap_threshold_s, | |
| ) | |
| selection = choose_operating_window( | |
| windows, | |
| time_col, | |
| previous_end_s=previous_window_end_s, | |
| gap_threshold_s=gap_threshold_s, | |
| ) | |
| selected = selection.data | |
| previous_window_end_s = float(selected[time_col].max()) | |
| heat_flux = selected[heat_flux_col] | |
| if "W/m²" in heat_flux_col or "W/m2" in heat_flux_col: | |
| heat_flux_w_cm2 = heat_flux / 10_000.0 | |
| else: | |
| heat_flux_w_cm2 = heat_flux | |
| rows.append( | |
| { | |
| "state_label": state["state_label"], | |
| "state_voltage": target, | |
| "thermal_rows": len(selected), | |
| "thermal_candidate_rows": len(candidate_rows), | |
| "thermal_window_blocks": selection.block_count, | |
| "thermal_window_block_index": selection.block_index, | |
| "thermal_window_selection": selection.reason, | |
| "thermal_window_gap_threshold_s": selection.gap_threshold_s, | |
| "thermal_window_duration_s": float(selected[time_col].max() - selected[time_col].min()), | |
| "thermal_window_max_internal_gap_s": max_internal_gap_s(selected, time_col), | |
| "time_start_s": float(selected[time_col].min()), | |
| "time_end_s": float(selected[time_col].max()), | |
| "voltage_mean_v": float(selected["_abs_voltage"].mean()), | |
| "power_mean_w": float(selected[power_col].mean()), | |
| "power_std_w": float(selected[power_col].std(ddof=1)), | |
| "heat_flux_mean_w_cm2": float(heat_flux_w_cm2.mean()), | |
| "heat_flux_std_w_cm2": float(heat_flux_w_cm2.std(ddof=1)), | |
| "mass_flow_mean_kg_s": float(selected[mass_flow_col].mean()), | |
| "mass_flow_std_kg_s": float(selected[mass_flow_col].std(ddof=1)), | |
| "fluid_velocity_mean_m_s": float(selected[velocity_col].mean()), | |
| "inlet_subcooling_mean_c": float(selected[inlet_subcool_col].mean()), | |
| "pressure_drop_mean_kpa": float((selected[pin_col] - selected[pout_col]).mean()), | |
| "inlet_temperature_mean_c": float(selected[tin_col].mean()), | |
| "outlet_temperature_mean_c": float(selected[tout_col].mean()), | |
| "wall_temperature_mean_c": ( | |
| float(selected[wall_temperature_cols].mean(axis=1).mean()) | |
| if wall_temperature_cols | |
| else np.nan | |
| ), | |
| "wall_temperature_std_c": ( | |
| float(selected[wall_temperature_cols].mean(axis=1).std(ddof=1)) | |
| if wall_temperature_cols | |
| else np.nan | |
| ), | |
| "htc_mean_w_m2k": float(selected[htc_cols].mean(axis=1).mean()) if htc_cols else np.nan, | |
| "quality_x7_mean": float(selected[quality_cols[-1]].mean()) if quality_cols else np.nan, | |
| } | |
| ) | |
| return pd.DataFrame(rows) | |
| def summarize_ae_by_thermal_windows(hit_file: Path, thermal_windows: pd.DataFrame) -> pd.DataFrame: | |
| hits = read_hit_file(hit_file) | |
| time_col = "SSSSSSSS.mmmuuun" | |
| rows = [] | |
| for row in thermal_windows.itertuples(index=False): | |
| duration = max(float(row.time_end_s - row.time_start_s), 1e-9) | |
| selected = hits[(hits[time_col] >= row.time_start_s) & (hits[time_col] <= row.time_end_s)] | |
| ch1 = selected[selected["CH"] == 1] | |
| ch2 = selected[selected["CH"] == 2] | |
| rows.append( | |
| { | |
| "state_label": row.state_label, | |
| "ae_hits": len(selected), | |
| "ae_hit_rate_hz": float(len(selected) / duration), | |
| "ae_abs_energy_rate": float(selected["ABS-ENERGY"].sum() / duration) if len(selected) else 0.0, | |
| "ae_amp_mean_db": float(selected["AMP"].mean()) if len(selected) else np.nan, | |
| "ae_ch1_hit_rate_hz": float(len(ch1) / duration), | |
| "ae_ch2_hit_rate_hz": float(len(ch2) / duration), | |
| } | |
| ) | |
| return pd.DataFrame(rows) | |
| def read_hit_file(hit_file: Path) -> pd.DataFrame: | |
| with hit_file.open("r", encoding="latin1") as handle: | |
| lines = handle.readlines() | |
| header_idx = next( | |
| index for index, line in enumerate(lines) if line.strip().startswith("ID") and "SSSS" in line | |
| ) | |
| columns = lines[header_idx].split() | |
| sig_idx = columns.index("SIG") | |
| columns = columns[:sig_idx] + ["SIG-STRENGTH"] + columns[sig_idx + 2 :] | |
| return pd.read_csv( | |
| hit_file, | |
| sep=r"\s+", | |
| names=columns, | |
| skiprows=header_idx + 1, | |
| engine="python", | |
| ) | |
| def find_column(data: pd.DataFrame, fragments: list[str]) -> str: | |
| for column in data.columns: | |
| text = str(column) | |
| if all(fragment in text for fragment in fragments): | |
| return column | |
| raise KeyError(f"Could not find column containing {fragments}") | |
| def plot_integrated_panel( | |
| case_label: str, | |
| summary: pd.DataFrame, | |
| figure_path: Path, | |
| thermal_workbook: Path, | |
| overlay_dir: Path, | |
| ) -> None: | |
| thermal = pd.read_excel(thermal_workbook) | |
| time_col = find_column(thermal, ["Time [s]"]) | |
| heat_flux_col = find_column(thermal, ["Heat Flux"]) | |
| heat_flux = thermal[heat_flux_col] | |
| if "W/m²" in heat_flux_col or "W/m2" in heat_flux_col: | |
| heat_flux = heat_flux / 10_000.0 | |
| fig = plt.figure(figsize=(13, 8), constrained_layout=True) | |
| gs = fig.add_gridspec(2, 2) | |
| ax0 = fig.add_subplot(gs[0, 0]) | |
| ax1 = fig.add_subplot(gs[0, 1]) | |
| ax2 = fig.add_subplot(gs[1, 0]) | |
| ax3 = fig.add_subplot(gs[1, 1]) | |
| ax0.plot(thermal[time_col], heat_flux, color="#333333", linewidth=1.5) | |
| ax0.set_title(f"{case_label}: thermal forcing") | |
| ax0.set_xlabel("Test-relative time (s)") | |
| ax0.set_ylabel("Heat flux (W/cm$^2$)") | |
| ax0.grid(True, alpha=0.3) | |
| ax1.errorbar( | |
| summary["state_voltage"], | |
| summary["vapor_area_fraction_mean"], | |
| yerr=summary["vapor_area_fraction_std"].fillna(0), | |
| marker="o", | |
| color="#1664a2", | |
| linewidth=1.8, | |
| capsize=3, | |
| ) | |
| ax1.set_title("Image-derived vapor coverage") | |
| ax1.set_xlabel("Applied voltage state (V)") | |
| ax1.set_ylabel("Projected vapor area fraction") | |
| ax1.grid(True, alpha=0.3) | |
| ax2.plot( | |
| summary["state_voltage"], | |
| summary["htc_mean_w_m2k"], | |
| marker="s", | |
| color="#8c2d04", | |
| linewidth=1.8, | |
| label="Mean HTC", | |
| ) | |
| ax2b = ax2.twinx() | |
| ax2b.plot( | |
| summary["state_voltage"], | |
| summary["heat_flux_mean_w_cm2"], | |
| marker="^", | |
| color="#2ca25f", | |
| linewidth=1.8, | |
| label="Heat flux", | |
| ) | |
| ax2.set_title("Thermal state summary") | |
| ax2.set_xlabel("Applied voltage state (V)") | |
| ax2.set_ylabel("Mean HTC (W/m$^2$ K)") | |
| ax2b.set_ylabel("Heat flux (W/cm$^2$)") | |
| ax2.grid(True, alpha=0.3) | |
| ax3.plot( | |
| summary["state_voltage"], | |
| summary["ae_hit_rate_hz"], | |
| marker="o", | |
| color="#6a51a3", | |
| linewidth=1.8, | |
| label="AE hit rate", | |
| ) | |
| ax3b = ax3.twinx() | |
| ax3b.plot( | |
| summary["state_voltage"], | |
| summary["ae_abs_energy_rate"], | |
| marker="D", | |
| color="#d95f0e", | |
| linewidth=1.8, | |
| label="AE abs. energy rate", | |
| ) | |
| ax3.set_title("AE activity, provisional time alignment") | |
| ax3.set_xlabel("Applied voltage state (V)") | |
| ax3.set_ylabel("Hit rate (Hz)") | |
| ax3b.set_ylabel("Abs. energy rate") | |
| ax3.grid(True, alpha=0.3) | |
| fig.suptitle( | |
| "First integrated BubbleID-Flow multimodal panel: image, thermal, and acoustic metrics", | |
| fontsize=14, | |
| ) | |
| fig.savefig(figure_path, dpi=220) | |
| plt.close(fig) | |
| contact_sheet_path = figure_path.with_name(f"{case_label}_representative_overlay_sheet.png") | |
| make_overlay_sheet(overlay_dir, contact_sheet_path) | |
| def make_overlay_sheet(overlay_dir: Path, output_path: Path) -> None: | |
| from PIL import Image, ImageDraw, ImageFont | |
| paths = sorted(overlay_dir.glob("*.png")) | |
| if not paths: | |
| return | |
| cell_w, cell_h = 360, 50 | |
| cols = 3 | |
| rows = int(np.ceil(len(paths) / cols)) | |
| label_h = 20 | |
| sheet = Image.new("RGB", (cols * cell_w, rows * (cell_h + label_h)), "white") | |
| draw = ImageDraw.Draw(sheet) | |
| try: | |
| font = ImageFont.truetype("arial.ttf", 12) | |
| except Exception: | |
| font = ImageFont.load_default() | |
| for index, path in enumerate(paths): | |
| row, col = divmod(index, cols) | |
| x = col * cell_w | |
| y = row * (cell_h + label_h) | |
| draw.text((x + 4, y + 3), path.name.split("_192.")[0], fill=(0, 0, 0), font=font) | |
| image = Image.open(path).convert("RGB").resize((cell_w, cell_h)) | |
| sheet.paste(image, (x, y + label_h)) | |
| sheet.save(output_path) | |
| def overlay_combined_mask(image: np.ndarray, mask: np.ndarray) -> np.ndarray: | |
| overlay = image.copy() | |
| red = np.zeros_like(image) | |
| red[:, :, 2] = 255 | |
| mask_bool = mask > 0 | |
| overlay[mask_bool] = cv2.addWeighted(image, 0.55, red, 0.45, 0)[mask_bool] | |
| contours, _ = cv2.findContours(mask, cv2.RETR_EXTERNAL, cv2.CHAIN_APPROX_SIMPLE) | |
| cv2.drawContours(overlay, contours, -1, (0, 255, 0), 1) | |
| return overlay | |
| def safe_name(value: str) -> str: | |
| return re.sub(r"[^A-Za-z0-9_.-]+", "_", value) | |
| def _build_cfg(weights: str, score_threshold: float, device: str, detections_per_image: int | None): | |
| cfg = get_cfg() | |
| cfg.merge_from_file( | |
| model_zoo.get_config_file("COCO-InstanceSegmentation/mask_rcnn_R_50_FPN_3x.yaml") | |
| ) | |
| cfg.MODEL.WEIGHTS = weights | |
| cfg.MODEL.DEVICE = device | |
| cfg.MODEL.ROI_HEADS.NUM_CLASSES = 1 | |
| cfg.MODEL.ROI_HEADS.SCORE_THRESH_TEST = score_threshold | |
| cfg.MODEL.ANCHOR_GENERATOR.SIZES = [[8], [16], [32], [64], [128]] | |
| cfg.INPUT.MIN_SIZE_TEST = 640 | |
| cfg.INPUT.MAX_SIZE_TEST = 900 | |
| if detections_per_image is not None: | |
| if detections_per_image <= 0: | |
| raise ValueError("detections_per_image must be positive") | |
| cfg.TEST.DETECTIONS_PER_IMAGE = detections_per_image | |
| return cfg | |
| if __name__ == "__main__": | |
| main() | |